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Boccitto et al 
Transcript map : CAPN3 Boccitto_Mock_1(21)
Exon
Length: 177
Transcript: BC100783
Exon
Length: 78
Transcript: BC100783
Exon
Length: 58
Transcript: BC100783
Exon
Length: 65
Transcript: BC100783
Exon
Length: 69
Transcript: BC100783
Exon
Length: 79
Transcript: BC100783
Exon
Length: 117
Transcript: BC100783
Exon
Length: 59
Transcript: BC100783
Exon
Length: 77
Transcript: BC100783
Intron
Length: 4347
Transcript: BC100783
Intron
Length: 406
Transcript: BC100783
Intron
Length: 86
Transcript: BC100783
Intron
Length: 432
Transcript: BC100783
Intron
Length: 91
Transcript: BC100783
Intron
Length: 217
Transcript: BC100783
Intron
Length: 286
Transcript: BC100783
Intron
Length: 740
Transcript: BC100783
Exon
Length: 177
Transcript: BC107791
Exon
Length: 114
Transcript: BC107791
Exon
Length: 78
Transcript: BC107791
Exon
Length: 58
Transcript: BC107791
Exon
Length: 65
Transcript: BC107791
Exon
Length: 69
Transcript: BC107791
Exon
Length: 79
Transcript: BC107791
Exon
Length: 117
Transcript: BC107791
Exon
Length: 59
Transcript: BC107791
Exon
Length: 571
Transcript: BC107791
Intron
Length: 3255
Transcript: BC107791
Intron
Length: 978
Transcript: BC107791
Intron
Length: 406
Transcript: BC107791
Intron
Length: 86
Transcript: BC107791
Intron
Length: 432
Transcript: BC107791
Intron
Length: 91
Transcript: BC107791
Intron
Length: 217
Transcript: BC107791
Intron
Length: 286
Transcript: BC107791
Intron
Length: 401
Transcript: BC107791
Exon
Length: 615
Transcript: NM_000070
Exon
Length: 70
Transcript: NM_000070
Exon
Length: 119
Transcript: NM_000070
Exon
Length: 134
Transcript: NM_000070
Exon
Length: 169
Transcript: NM_000070
Exon
Length: 144
Transcript: NM_000070
Exon
Length: 84
Transcript: NM_000070
Exon
Length: 86
Transcript: NM_000070
Exon
Length: 78
Transcript: NM_000070
Exon
Length: 161
Transcript: NM_000070
Exon
Length: 170
Transcript: NM_000070
Exon
Length: 12
Transcript: NM_000070
Exon
Length: 209
Transcript: NM_000070
Exon
Length: 37
Transcript: NM_000070
Exon
Length: 18
Transcript: NM_000070
Exon
Length: 114
Transcript: NM_000070
Exon
Length: 78
Transcript: NM_000070
Exon
Length: 58
Transcript: NM_000070
Exon
Length: 65
Transcript: NM_000070
Exon
Length: 69
Transcript: NM_000070
Exon
Length: 79
Transcript: NM_000070
Exon
Length: 117
Transcript: NM_000070
Exon
Length: 59
Transcript: NM_000070
Exon
Length: 571
Transcript: NM_000070
Intron
Length: 24368
Transcript: NM_000070
Intron
Length: 1614
Transcript: NM_000070
Intron
Length: 1467
Transcript: NM_000070
Intron
Length: 1041
Transcript: NM_000070
Intron
Length: 856
Transcript: NM_000070
Intron
Length: 2542
Transcript: NM_000070
Intron
Length: 1533
Transcript: NM_000070
Intron
Length: 2458
Transcript: NM_000070
Intron
Length: 2614
Transcript: NM_000070
Intron
Length: 1988
Transcript: NM_000070
Intron
Length: 313
Transcript: NM_000070
Intron
Length: 658
Transcript: NM_000070
Intron
Length: 738
Transcript: NM_000070
Intron
Length: 2148
Transcript: NM_000070
Intron
Length: 2267
Transcript: NM_000070
Intron
Length: 978
Transcript: NM_000070
Intron
Length: 406
Transcript: NM_000070
Intron
Length: 86
Transcript: NM_000070
Intron
Length: 432
Transcript: NM_000070
Intron
Length: 91
Transcript: NM_000070
Intron
Length: 217
Transcript: NM_000070
Intron
Length: 286
Transcript: NM_000070
Intron
Length: 401
Transcript: NM_000070
Reaction
Expected peak: 297
3.2M
CAPN3.u.f.38
CAPN3.u.r.40
Exon
Length: 615
Transcript: NM_024344
Exon
Length: 70
Transcript: NM_024344
Exon
Length: 119
Transcript: NM_024344
Exon
Length: 134
Transcript: NM_024344
Exon
Length: 169
Transcript: NM_024344
Exon
Length: 144
Transcript: NM_024344
Exon
Length: 84
Transcript: NM_024344
Exon
Length: 86
Transcript: NM_024344
Exon
Length: 78
Transcript: NM_024344
Exon
Length: 161
Transcript: NM_024344
Exon
Length: 170
Transcript: NM_024344
Exon
Length: 12
Transcript: NM_024344
Exon
Length: 209
Transcript: NM_024344
Exon
Length: 37
Transcript: NM_024344
Exon
Length: 114
Transcript: NM_024344
Exon
Length: 78
Transcript: NM_024344
Exon
Length: 58
Transcript: NM_024344
Exon
Length: 65
Transcript: NM_024344
Exon
Length: 69
Transcript: NM_024344
Exon
Length: 79
Transcript: NM_024344
Exon
Length: 117
Transcript: NM_024344
Exon
Length: 59
Transcript: NM_024344
Exon
Length: 571
Transcript: NM_024344
Intron
Length: 24368
Transcript: NM_024344
Intron
Length: 1614
Transcript: NM_024344
Intron
Length: 1467
Transcript: NM_024344
Intron
Length: 1041
Transcript: NM_024344
Intron
Length: 856
Transcript: NM_024344
Intron
Length: 2542
Transcript: NM_024344
Intron
Length: 1533
Transcript: NM_024344
Intron
Length: 2458
Transcript: NM_024344
Intron
Length: 2614
Transcript: NM_024344
Intron
Length: 1988
Transcript: NM_024344
Intron
Length: 313
Transcript: NM_024344
Intron
Length: 658
Transcript: NM_024344
Intron
Length: 738
Transcript: NM_024344
Intron
Length: 4433
Transcript: NM_024344
Intron
Length: 978
Transcript: NM_024344
Intron
Length: 406
Transcript: NM_024344
Intron
Length: 86
Transcript: NM_024344
Intron
Length: 432
Transcript: NM_024344
Intron
Length: 91
Transcript: NM_024344
Intron
Length: 217
Transcript: NM_024344
Intron
Length: 286
Transcript: NM_024344
Intron
Length: 401
Transcript: NM_024344
Reaction
Expected peak: 297
3.2M
CAPN3.u.f.38
CAPN3.u.r.40
Exon
Length: 615
Transcript: NM_173087
Exon
Length: 70
Transcript: NM_173087
Exon
Length: 119
Transcript: NM_173087
Exon
Length: 134
Transcript: NM_173087
Exon
Length: 169
Transcript: NM_173087
Exon
Length: 84
Transcript: NM_173087
Exon
Length: 86
Transcript: NM_173087
Exon
Length: 78
Transcript: NM_173087
Exon
Length: 161
Transcript: NM_173087
Exon
Length: 170
Transcript: NM_173087
Exon
Length: 12
Transcript: NM_173087
Exon
Length: 209
Transcript: NM_173087
Exon
Length: 37
Transcript: NM_173087
Exon
Length: 78
Transcript: NM_173087
Exon
Length: 58
Transcript: NM_173087
Exon
Length: 65
Transcript: NM_173087
Exon
Length: 69
Transcript: NM_173087
Exon
Length: 79
Transcript: NM_173087
Exon
Length: 117
Transcript: NM_173087
Exon
Length: 59
Transcript: NM_173087
Exon
Length: 571
Transcript: NM_173087
Intron
Length: 24368
Transcript: NM_173087
Intron
Length: 1614
Transcript: NM_173087
Intron
Length: 1467
Transcript: NM_173087
Intron
Length: 1041
Transcript: NM_173087
Intron
Length: 3542
Transcript: NM_173087
Intron
Length: 1533
Transcript: NM_173087
Intron
Length: 2458
Transcript: NM_173087
Intron
Length: 2614
Transcript: NM_173087
Intron
Length: 1988
Transcript: NM_173087
Intron
Length: 313
Transcript: NM_173087
Intron
Length: 658
Transcript: NM_173087
Intron
Length: 738
Transcript: NM_173087
Intron
Length: 5525
Transcript: NM_173087
Intron
Length: 406
Transcript: NM_173087
Intron
Length: 86
Transcript: NM_173087
Intron
Length: 432
Transcript: NM_173087
Intron
Length: 91
Transcript: NM_173087
Intron
Length: 217
Transcript: NM_173087
Intron
Length: 286
Transcript: NM_173087
Intron
Length: 401
Transcript: NM_173087
Reaction
Expected peak: 153
13.4M
CAPN3.u.f.38
CAPN3.u.r.40
Exon
Length: 169
Transcript: NM_173088
Exon
Length: 209
Transcript: NM_173088
Exon
Length: 37
Transcript: NM_173088
Exon
Length: 18
Transcript: NM_173088
Exon
Length: 114
Transcript: NM_173088
Exon
Length: 78
Transcript: NM_173088
Exon
Length: 58
Transcript: NM_173088
Exon
Length: 65
Transcript: NM_173088
Exon
Length: 69
Transcript: NM_173088
Exon
Length: 79
Transcript: NM_173088
Exon
Length: 117
Transcript: NM_173088
Exon
Length: 59
Transcript: NM_173088
Exon
Length: 571
Transcript: NM_173088
Intron
Length: 235
Transcript: NM_173088
Intron
Length: 738
Transcript: NM_173088
Intron
Length: 2148
Transcript: NM_173088
Intron
Length: 2267
Transcript: NM_173088
Intron
Length: 978
Transcript: NM_173088
Intron
Length: 406
Transcript: NM_173088
Intron
Length: 86
Transcript: NM_173088
Intron
Length: 432
Transcript: NM_173088
Intron
Length: 91
Transcript: NM_173088
Intron
Length: 217
Transcript: NM_173088
Intron
Length: 286
Transcript: NM_173088
Intron
Length: 401
Transcript: NM_173088
Exon
Length: 177
Transcript: NM_173089
Exon
Length: 78
Transcript: NM_173089
Exon
Length: 58
Transcript: NM_173089
Exon
Length: 65
Transcript: NM_173089
Exon
Length: 69
Transcript: NM_173089
Exon
Length: 79
Transcript: NM_173089
Exon
Length: 117
Transcript: NM_173089
Exon
Length: 59
Transcript: NM_173089
Exon
Length: 571
Transcript: NM_173089
Intron
Length: 4347
Transcript: NM_173089
Intron
Length: 406
Transcript: NM_173089
Intron
Length: 86
Transcript: NM_173089
Intron
Length: 432
Transcript: NM_173089
Intron
Length: 91
Transcript: NM_173089
Intron
Length: 217
Transcript: NM_173089
Intron
Length: 286
Transcript: NM_173089
Intron
Length: 401
Transcript: NM_173089
Exon
Length: 177
Transcript: NM_173090
Exon
Length: 18
Transcript: NM_173090
Exon
Length: 78
Transcript: NM_173090
Exon
Length: 58
Transcript: NM_173090
Exon
Length: 65
Transcript: NM_173090
Exon
Length: 69
Transcript: NM_173090
Exon
Length: 79
Transcript: NM_173090
Exon
Length: 117
Transcript: NM_173090
Exon
Length: 59
Transcript: NM_173090
Exon
Length: 571
Transcript: NM_173090
Intron
Length: 970
Transcript: NM_173090
Intron
Length: 3359
Transcript: NM_173090
Intron
Length: 406
Transcript: NM_173090
Intron
Length: 86
Transcript: NM_173090
Intron
Length: 432
Transcript: NM_173090
Intron
Length: 91
Transcript: NM_173090
Intron
Length: 217
Transcript: NM_173090
Intron
Length: 286
Transcript: NM_173090
Intron
Length: 401
Transcript: NM_173090
Exon
Length: 114
Transcript: NM_212464
Exon
Length: 113
Transcript: NM_212464
Exon
Length: 104
Transcript: NM_212464
Exon
Length: 95
Transcript: NM_212464
Exon
Length: 114
Transcript: NM_212464
Exon
Length: 70
Transcript: NM_212464
Exon
Length: 119
Transcript: NM_212464
Exon
Length: 134
Transcript: NM_212464
Exon
Length: 169
Transcript: NM_212464
Exon
Length: 144
Transcript: NM_212464
Exon
Length: 84
Transcript: NM_212464
Exon
Length: 86
Transcript: NM_212464
Exon
Length: 78
Transcript: NM_212464
Exon
Length: 161
Transcript: NM_212464
Exon
Length: 170
Transcript: NM_212464
Exon
Length: 879
Transcript: NM_212464
Exon
Length: 37
Transcript: NM_212464
Exon
Length: 114
Transcript: NM_212464
Exon
Length: 78
Transcript: NM_212464
Exon
Length: 58
Transcript: NM_212464
Exon
Length: 65
Transcript: NM_212464
Exon
Length: 69
Transcript: NM_212464
Exon
Length: 79
Transcript: NM_212464
Exon
Length: 117
Transcript: NM_212464
Exon
Length: 59
Transcript: NM_212464
Exon
Length: 571
Transcript: NM_212464
Intron
Length: 1166
Transcript: NM_212464
Intron
Length: 1833
Transcript: NM_212464
Intron
Length: 597
Transcript: NM_212464
Intron
Length: 2215
Transcript: NM_212464
Intron
Length: 30029
Transcript: NM_212464
Intron
Length: 1614
Transcript: NM_212464
Intron
Length: 1467
Transcript: NM_212464
Intron
Length: 1041
Transcript: NM_212464
Intron
Length: 856
Transcript: NM_212464
Intron
Length: 2542
Transcript: NM_212464
Intron
Length: 1533
Transcript: NM_212464
Intron
Length: 2458
Transcript: NM_212464
Intron
Length: 2614
Transcript: NM_212464
Intron
Length: 1988
Transcript: NM_212464
Intron
Length: 313
Transcript: NM_212464
Intron
Length: 738
Transcript: NM_212464
Intron
Length: 4433
Transcript: NM_212464
Intron
Length: 978
Transcript: NM_212464
Intron
Length: 406
Transcript: NM_212464
Intron
Length: 86
Transcript: NM_212464
Intron
Length: 432
Transcript: NM_212464
Intron
Length: 91
Transcript: NM_212464
Intron
Length: 217
Transcript: NM_212464
Intron
Length: 286
Transcript: NM_212464
Intron
Length: 401
Transcript: NM_212464
Reaction
Expected peak: 297
3.2M
CAPN3.u.f.38
CAPN3.u.r.40
Exon
Length: 114
Transcript: NM_212465
Exon
Length: 113
Transcript: NM_212465
Exon
Length: 104
Transcript: NM_212465
Exon
Length: 95
Transcript: NM_212465
Exon
Length: 114
Transcript: NM_212465
Exon
Length: 70
Transcript: NM_212465
Exon
Length: 119
Transcript: NM_212465
Exon
Length: 134
Transcript: NM_212465
Exon
Length: 169
Transcript: NM_212465
Exon
Length: 144
Transcript: NM_212465
Exon
Length: 84
Transcript: NM_212465
Exon
Length: 86
Transcript: NM_212465
Exon
Length: 78
Transcript: NM_212465
Exon
Length: 161
Transcript: NM_212465
Exon
Length: 170
Transcript: NM_212465
Exon
Length: 12
Transcript: NM_212465
Exon
Length: 209
Transcript: NM_212465
Exon
Length: 37
Transcript: NM_212465
Exon
Length: 114
Transcript: NM_212465
Exon
Length: 78
Transcript: NM_212465
Exon
Length: 58
Transcript: NM_212465
Exon
Length: 65
Transcript: NM_212465
Exon
Length: 69
Transcript: NM_212465
Exon
Length: 79
Transcript: NM_212465
Exon
Length: 117
Transcript: NM_212465
Exon
Length: 59
Transcript: NM_212465
Exon
Length: 571
Transcript: NM_212465
Intron
Length: 1166
Transcript: NM_212465
Intron
Length: 1833
Transcript: NM_212465
Intron
Length: 597
Transcript: NM_212465
Intron
Length: 2215
Transcript: NM_212465
Intron
Length: 30029
Transcript: NM_212465
Intron
Length: 1614
Transcript: NM_212465
Intron
Length: 1467
Transcript: NM_212465
Intron
Length: 1041
Transcript: NM_212465
Intron
Length: 856
Transcript: NM_212465
Intron
Length: 2542
Transcript: NM_212465
Intron
Length: 1533
Transcript: NM_212465
Intron
Length: 2458
Transcript: NM_212465
Intron
Length: 2614
Transcript: NM_212465
Intron
Length: 1988
Transcript: NM_212465
Intron
Length: 313
Transcript: NM_212465
Intron
Length: 658
Transcript: NM_212465
Intron
Length: 738
Transcript: NM_212465
Intron
Length: 4433
Transcript: NM_212465
Intron
Length: 978
Transcript: NM_212465
Intron
Length: 406
Transcript: NM_212465
Intron
Length: 86
Transcript: NM_212465
Intron
Length: 432
Transcript: NM_212465
Intron
Length: 91
Transcript: NM_212465
Intron
Length: 217
Transcript: NM_212465
Intron
Length: 286
Transcript: NM_212465
Intron
Length: 401
Transcript: NM_212465
Reaction
Expected peak: 297
3.2M
CAPN3.u.f.38
CAPN3.u.r.40
Exon
Length: 114
Transcript: NM_212467
Exon
Length: 113
Transcript: NM_212467
Exon
Length: 104
Transcript: NM_212467
Exon
Length: 95
Transcript: NM_212467
Exon
Length: 114
Transcript: NM_212467
Exon
Length: 70
Transcript: NM_212467
Exon
Length: 278
Transcript: NM_212467
Exon
Length: 119
Transcript: NM_212467
Exon
Length: 134
Transcript: NM_212467
Exon
Length: 169
Transcript: NM_212467
Exon
Length: 144
Transcript: NM_212467
Exon
Length: 84
Transcript: NM_212467
Exon
Length: 86
Transcript: NM_212467
Exon
Length: 78
Transcript: NM_212467
Exon
Length: 161
Transcript: NM_212467
Exon
Length: 170
Transcript: NM_212467
Exon
Length: 12
Transcript: NM_212467
Exon
Length: 209
Transcript: NM_212467
Exon
Length: 37
Transcript: NM_212467
Exon
Length: 114
Transcript: NM_212467
Exon
Length: 78
Transcript: NM_212467
Exon
Length: 58
Transcript: NM_212467
Exon
Length: 65
Transcript: NM_212467
Exon
Length: 69
Transcript: NM_212467
Exon
Length: 79
Transcript: NM_212467
Exon
Length: 117
Transcript: NM_212467
Exon
Length: 59
Transcript: NM_212467
Exon
Length: 571
Transcript: NM_212467
Intron
Length: 1166
Transcript: NM_212467
Intron
Length: 1833
Transcript: NM_212467
Intron
Length: 597
Transcript: NM_212467
Intron
Length: 2215
Transcript: NM_212467
Intron
Length: 30029
Transcript: NM_212467
Intron
Length: 1126
Transcript: NM_212467
Intron
Length: 210
Transcript: NM_212467
Intron
Length: 1467
Transcript: NM_212467
Intron
Length: 1041
Transcript: NM_212467
Intron
Length: 856
Transcript: NM_212467
Intron
Length: 2542
Transcript: NM_212467
Intron
Length: 1533
Transcript: NM_212467
Intron
Length: 2458
Transcript: NM_212467
Intron
Length: 2614
Transcript: NM_212467
Intron
Length: 1988
Transcript: NM_212467
Intron
Length: 313
Transcript: NM_212467
Intron
Length: 658
Transcript: NM_212467
Intron
Length: 738
Transcript: NM_212467
Intron
Length: 4433
Transcript: NM_212467
Intron
Length: 978
Transcript: NM_212467
Intron
Length: 406
Transcript: NM_212467
Intron
Length: 86
Transcript: NM_212467
Intron
Length: 432
Transcript: NM_212467
Intron
Length: 91
Transcript: NM_212467
Intron
Length: 217
Transcript: NM_212467
Intron
Length: 286
Transcript: NM_212467
Intron
Length: 401
Transcript: NM_212467
Reaction
Expected peak: 297
3.2M
CAPN3.u.f.38
CAPN3.u.r.40
CAPN3.u.r.40
TTCTCACCTTTGAACGGGAC
CAPN3.u.f.38
CATGAAGAAAGCCATCGAGAG

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