Back to Rnomics Platform
Open Session
×
1 warning:
- Access restricted to public data.
Please sign in at Rnomics Platform to access your data.
Home
Supplementary data
RBFOX2 enforces the mesenchymal splicing signature in normal and cancer tissues
2. Full RefSeq screen / 9 cell lines
Transcript map
: A2BP1 HS 578T
Exon
Length: 862
Transcript: NM_018723
Length: 862
Transcript: NM_018723
Exon
Length: 63
Transcript: NM_018723
Length: 63
Transcript: NM_018723
Exon
Length: 48
Transcript: NM_018723
Length: 48
Transcript: NM_018723
Exon
Length: 42
Transcript: NM_018723
Length: 42
Transcript: NM_018723
Exon
Length: 243
Transcript: NM_018723
Length: 243
Transcript: NM_018723
Exon
Length: 144
Transcript: NM_018723
Length: 144
Transcript: NM_018723
Exon
Length: 54
Transcript: NM_018723
Length: 54
Transcript: NM_018723
Exon
Length: 93
Transcript: NM_018723
Length: 93
Transcript: NM_018723
Exon
Length: 61
Transcript: NM_018723
Length: 61
Transcript: NM_018723
Exon
Length: 54
Transcript: NM_018723
Length: 54
Transcript: NM_018723
Exon
Length: 81
Transcript: NM_018723
Length: 81
Transcript: NM_018723
Exon
Length: 133
Transcript: NM_018723
Length: 133
Transcript: NM_018723
Exon
Length: 40
Transcript: NM_018723
Length: 40
Transcript: NM_018723
Exon
Length: 65
Transcript: NM_018723
Length: 65
Transcript: NM_018723
Exon
Length: 76
Transcript: NM_018723
Length: 76
Transcript: NM_018723
Exon
Length: 222
Transcript: NM_018723
Length: 222
Transcript: NM_018723
Intron
Length: 297002
Transcript: NM_018723
Length: 297002
Transcript: NM_018723
Intron
Length: 337545
Transcript: NM_018723
Length: 337545
Transcript: NM_018723
Intron
Length: 397406
Transcript: NM_018723
Length: 397406
Transcript: NM_018723
Intron
Length: 466049
Transcript: NM_018723
Length: 466049
Transcript: NM_018723
Intron
Length: 61387
Transcript: NM_018723
Length: 61387
Transcript: NM_018723
Intron
Length: 7326
Transcript: NM_018723
Length: 7326
Transcript: NM_018723
Intron
Length: 8248
Transcript: NM_018723
Length: 8248
Transcript: NM_018723
Intron
Length: 1729
Transcript: NM_018723
Length: 1729
Transcript: NM_018723
Intron
Length: 9853
Transcript: NM_018723
Length: 9853
Transcript: NM_018723
Intron
Length: 23264
Transcript: NM_018723
Length: 23264
Transcript: NM_018723
Intron
Length: 23131
Transcript: NM_018723
Length: 23131
Transcript: NM_018723
Intron
Length: 10981
Transcript: NM_018723
Length: 10981
Transcript: NM_018723
Intron
Length: 11805
Transcript: NM_018723
Length: 11805
Transcript: NM_018723
Intron
Length: 32217
Transcript: NM_018723
Length: 32217
Transcript: NM_018723
Intron
Length: 1491
Transcript: NM_018723
Length: 1491
Transcript: NM_018723
Reaction
Expected peak: 112
3.5M
refseq_A2BP1.F3
refseq_A2BP1.R3
Expected peak: 112
3.5M
refseq_A2BP1.F3
refseq_A2BP1.R3
Exon
Length: 339
Transcript: NM_145891
Length: 339
Transcript: NM_145891
Exon
Length: 243
Transcript: NM_145891
Length: 243
Transcript: NM_145891
Exon
Length: 144
Transcript: NM_145891
Length: 144
Transcript: NM_145891
Exon
Length: 54
Transcript: NM_145891
Length: 54
Transcript: NM_145891
Exon
Length: 93
Transcript: NM_145891
Length: 93
Transcript: NM_145891
Exon
Length: 61
Transcript: NM_145891
Length: 61
Transcript: NM_145891
Exon
Length: 54
Transcript: NM_145891
Length: 54
Transcript: NM_145891
Exon
Length: 81
Transcript: NM_145891
Length: 81
Transcript: NM_145891
Exon
Length: 133
Transcript: NM_145891
Length: 133
Transcript: NM_145891
Exon
Length: 43
Transcript: NM_145891
Length: 43
Transcript: NM_145891
Exon
Length: 65
Transcript: NM_145891
Length: 65
Transcript: NM_145891
Exon
Length: 76
Transcript: NM_145891
Length: 76
Transcript: NM_145891
Exon
Length: 1875
Transcript: NM_145891
Length: 1875
Transcript: NM_145891
Intron
Length: 185059
Transcript: NM_145891
Length: 185059
Transcript: NM_145891
Intron
Length: 61387
Transcript: NM_145891
Length: 61387
Transcript: NM_145891
Intron
Length: 7326
Transcript: NM_145891
Length: 7326
Transcript: NM_145891
Intron
Length: 8248
Transcript: NM_145891
Length: 8248
Transcript: NM_145891
Intron
Length: 1729
Transcript: NM_145891
Length: 1729
Transcript: NM_145891
Intron
Length: 9853
Transcript: NM_145891
Length: 9853
Transcript: NM_145891
Intron
Length: 23264
Transcript: NM_145891
Length: 23264
Transcript: NM_145891
Intron
Length: 23131
Transcript: NM_145891
Length: 23131
Transcript: NM_145891
Intron
Length: 17609
Transcript: NM_145891
Length: 17609
Transcript: NM_145891
Intron
Length: 5174
Transcript: NM_145891
Length: 5174
Transcript: NM_145891
Intron
Length: 32217
Transcript: NM_145891
Length: 32217
Transcript: NM_145891
Intron
Length: 1491
Transcript: NM_145891
Length: 1491
Transcript: NM_145891
Reaction
Expected peak: 112
3.5M
refseq_A2BP1.F3
refseq_A2BP1.R3
Expected peak: 112
3.5M
refseq_A2BP1.F3
refseq_A2BP1.R3
Exon
Length: 339
Transcript: NM_145892
Length: 339
Transcript: NM_145892
Exon
Length: 243
Transcript: NM_145892
Length: 243
Transcript: NM_145892
Exon
Length: 144
Transcript: NM_145892
Length: 144
Transcript: NM_145892
Exon
Length: 54
Transcript: NM_145892
Length: 54
Transcript: NM_145892
Exon
Length: 93
Transcript: NM_145892
Length: 93
Transcript: NM_145892
Exon
Length: 61
Transcript: NM_145892
Length: 61
Transcript: NM_145892
Exon
Length: 54
Transcript: NM_145892
Length: 54
Transcript: NM_145892
Exon
Length: 81
Transcript: NM_145892
Length: 81
Transcript: NM_145892
Exon
Length: 133
Transcript: NM_145892
Length: 133
Transcript: NM_145892
Exon
Length: 43
Transcript: NM_145892
Length: 43
Transcript: NM_145892
Exon
Length: 65
Transcript: NM_145892
Length: 65
Transcript: NM_145892
Exon
Length: 76
Transcript: NM_145892
Length: 76
Transcript: NM_145892
Exon
Length: 1797
Transcript: NM_145892
Length: 1797
Transcript: NM_145892
Intron
Length: 185059
Transcript: NM_145892
Length: 185059
Transcript: NM_145892
Intron
Length: 61387
Transcript: NM_145892
Length: 61387
Transcript: NM_145892
Intron
Length: 7326
Transcript: NM_145892
Length: 7326
Transcript: NM_145892
Intron
Length: 8248
Transcript: NM_145892
Length: 8248
Transcript: NM_145892
Intron
Length: 1729
Transcript: NM_145892
Length: 1729
Transcript: NM_145892
Intron
Length: 9853
Transcript: NM_145892
Length: 9853
Transcript: NM_145892
Intron
Length: 23264
Transcript: NM_145892
Length: 23264
Transcript: NM_145892
Intron
Length: 23131
Transcript: NM_145892
Length: 23131
Transcript: NM_145892
Intron
Length: 17609
Transcript: NM_145892
Length: 17609
Transcript: NM_145892
Intron
Length: 5174
Transcript: NM_145892
Length: 5174
Transcript: NM_145892
Intron
Length: 32217
Transcript: NM_145892
Length: 32217
Transcript: NM_145892
Intron
Length: 1569
Transcript: NM_145892
Length: 1569
Transcript: NM_145892
Reaction
Expected peak: 112
3.5M
refseq_A2BP1.F3
refseq_A2BP1.R3
Expected peak: 112
3.5M
refseq_A2BP1.F3
refseq_A2BP1.R3
Exon
Length: 339
Transcript: NM_145893
Length: 339
Transcript: NM_145893
Exon
Length: 243
Transcript: NM_145893
Length: 243
Transcript: NM_145893
Exon
Length: 144
Transcript: NM_145893
Length: 144
Transcript: NM_145893
Exon
Length: 54
Transcript: NM_145893
Length: 54
Transcript: NM_145893
Exon
Length: 93
Transcript: NM_145893
Length: 93
Transcript: NM_145893
Exon
Length: 61
Transcript: NM_145893
Length: 61
Transcript: NM_145893
Exon
Length: 54
Transcript: NM_145893
Length: 54
Transcript: NM_145893
Exon
Length: 81
Transcript: NM_145893
Length: 81
Transcript: NM_145893
Exon
Length: 133
Transcript: NM_145893
Length: 133
Transcript: NM_145893
Exon
Length: 43
Transcript: NM_145893
Length: 43
Transcript: NM_145893
Exon
Length: 65
Transcript: NM_145893
Length: 65
Transcript: NM_145893
Exon
Length: 53
Transcript: NM_145893
Length: 53
Transcript: NM_145893
Exon
Length: 76
Transcript: NM_145893
Length: 76
Transcript: NM_145893
Exon
Length: 1875
Transcript: NM_145893
Length: 1875
Transcript: NM_145893
Intron
Length: 185059
Transcript: NM_145893
Length: 185059
Transcript: NM_145893
Intron
Length: 61387
Transcript: NM_145893
Length: 61387
Transcript: NM_145893
Intron
Length: 7326
Transcript: NM_145893
Length: 7326
Transcript: NM_145893
Intron
Length: 8248
Transcript: NM_145893
Length: 8248
Transcript: NM_145893
Intron
Length: 1729
Transcript: NM_145893
Length: 1729
Transcript: NM_145893
Intron
Length: 9853
Transcript: NM_145893
Length: 9853
Transcript: NM_145893
Intron
Length: 23264
Transcript: NM_145893
Length: 23264
Transcript: NM_145893
Intron
Length: 23131
Transcript: NM_145893
Length: 23131
Transcript: NM_145893
Intron
Length: 17609
Transcript: NM_145893
Length: 17609
Transcript: NM_145893
Intron
Length: 5174
Transcript: NM_145893
Length: 5174
Transcript: NM_145893
Intron
Length: 16476
Transcript: NM_145893
Length: 16476
Transcript: NM_145893
Intron
Length: 15688
Transcript: NM_145893
Length: 15688
Transcript: NM_145893
Intron
Length: 1491
Transcript: NM_145893
Length: 1491
Transcript: NM_145893
Reaction
Expected peak: 165
3.2M
refseq_A2BP1.F3
refseq_A2BP1.R3
Expected peak: 165
3.2M
refseq_A2BP1.F3
refseq_A2BP1.R3
refseq_A2BP1.R3
GAGCAAGTGCGTGGTGGTAG
GAGCAAGTGCGTGGTGGTAG
refseq_A2BP1.F3
GGTGGTTATGCTGCATACCG
GGTGGTTATGCTGCATACCG