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Supplementary data
RBFOX2 enforces the mesenchymal splicing signature in normal and cancer tissues
2. Full RefSeq screen / 9 cell lines
Transcript map
: ACCN3 HS 578T
Exon
Length: 555
Transcript: NM_004769
Length: 555
Transcript: NM_004769
Exon
Length: 151
Transcript: NM_004769
Length: 151
Transcript: NM_004769
Exon
Length: 128
Transcript: NM_004769
Length: 128
Transcript: NM_004769
Exon
Length: 196
Transcript: NM_004769
Length: 196
Transcript: NM_004769
Exon
Length: 57
Transcript: NM_004769
Length: 57
Transcript: NM_004769
Exon
Length: 148
Transcript: NM_004769
Length: 148
Transcript: NM_004769
Exon
Length: 92
Transcript: NM_004769
Length: 92
Transcript: NM_004769
Exon
Length: 80
Transcript: NM_004769
Length: 80
Transcript: NM_004769
Exon
Length: 72
Transcript: NM_004769
Length: 72
Transcript: NM_004769
Exon
Length: 59
Transcript: NM_004769
Length: 59
Transcript: NM_004769
Exon
Length: 181
Transcript: NM_004769
Length: 181
Transcript: NM_004769
Intron
Length: 686
Transcript: NM_004769
Length: 686
Transcript: NM_004769
Intron
Length: 224
Transcript: NM_004769
Length: 224
Transcript: NM_004769
Intron
Length: 149
Transcript: NM_004769
Length: 149
Transcript: NM_004769
Intron
Length: 85
Transcript: NM_004769
Length: 85
Transcript: NM_004769
Intron
Length: 76
Transcript: NM_004769
Length: 76
Transcript: NM_004769
Intron
Length: 490
Transcript: NM_004769
Length: 490
Transcript: NM_004769
Intron
Length: 81
Transcript: NM_004769
Length: 81
Transcript: NM_004769
Intron
Length: 103
Transcript: NM_004769
Length: 103
Transcript: NM_004769
Intron
Length: 178
Transcript: NM_004769
Length: 178
Transcript: NM_004769
Intron
Length: 99
Transcript: NM_004769
Length: 99
Transcript: NM_004769
Reaction
Expected peak: 113
20M
refseq_ACCN3.F1
refseq_ACCN3.R1
Expected peak: 113
20M
refseq_ACCN3.F1
refseq_ACCN3.R1
Exon
Length: 555
Transcript: NM_020321
Length: 555
Transcript: NM_020321
Exon
Length: 151
Transcript: NM_020321
Length: 151
Transcript: NM_020321
Exon
Length: 128
Transcript: NM_020321
Length: 128
Transcript: NM_020321
Exon
Length: 196
Transcript: NM_020321
Length: 196
Transcript: NM_020321
Exon
Length: 57
Transcript: NM_020321
Length: 57
Transcript: NM_020321
Exon
Length: 148
Transcript: NM_020321
Length: 148
Transcript: NM_020321
Exon
Length: 92
Transcript: NM_020321
Length: 92
Transcript: NM_020321
Exon
Length: 80
Transcript: NM_020321
Length: 80
Transcript: NM_020321
Exon
Length: 72
Transcript: NM_020321
Length: 72
Transcript: NM_020321
Exon
Length: 59
Transcript: NM_020321
Length: 59
Transcript: NM_020321
Exon
Length: 201
Transcript: NM_020321
Length: 201
Transcript: NM_020321
Intron
Length: 686
Transcript: NM_020321
Length: 686
Transcript: NM_020321
Intron
Length: 224
Transcript: NM_020321
Length: 224
Transcript: NM_020321
Intron
Length: 149
Transcript: NM_020321
Length: 149
Transcript: NM_020321
Intron
Length: 85
Transcript: NM_020321
Length: 85
Transcript: NM_020321
Intron
Length: 76
Transcript: NM_020321
Length: 76
Transcript: NM_020321
Intron
Length: 490
Transcript: NM_020321
Length: 490
Transcript: NM_020321
Intron
Length: 81
Transcript: NM_020321
Length: 81
Transcript: NM_020321
Intron
Length: 103
Transcript: NM_020321
Length: 103
Transcript: NM_020321
Intron
Length: 178
Transcript: NM_020321
Length: 178
Transcript: NM_020321
Intron
Length: 79
Transcript: NM_020321
Length: 79
Transcript: NM_020321
Reaction
Expected peak: 133
1.3M
refseq_ACCN3.F1
refseq_ACCN3.R1
Expected peak: 133
1.3M
refseq_ACCN3.F1
refseq_ACCN3.R1
Exon
Length: 555
Transcript: NM_020322
Length: 555
Transcript: NM_020322
Exon
Length: 151
Transcript: NM_020322
Length: 151
Transcript: NM_020322
Exon
Length: 128
Transcript: NM_020322
Length: 128
Transcript: NM_020322
Exon
Length: 196
Transcript: NM_020322
Length: 196
Transcript: NM_020322
Exon
Length: 57
Transcript: NM_020322
Length: 57
Transcript: NM_020322
Exon
Length: 148
Transcript: NM_020322
Length: 148
Transcript: NM_020322
Exon
Length: 92
Transcript: NM_020322
Length: 92
Transcript: NM_020322
Exon
Length: 80
Transcript: NM_020322
Length: 80
Transcript: NM_020322
Exon
Length: 72
Transcript: NM_020322
Length: 72
Transcript: NM_020322
Exon
Length: 181
Transcript: NM_020322
Length: 181
Transcript: NM_020322
Intron
Length: 686
Transcript: NM_020322
Length: 686
Transcript: NM_020322
Intron
Length: 224
Transcript: NM_020322
Length: 224
Transcript: NM_020322
Intron
Length: 149
Transcript: NM_020322
Length: 149
Transcript: NM_020322
Intron
Length: 85
Transcript: NM_020322
Length: 85
Transcript: NM_020322
Intron
Length: 76
Transcript: NM_020322
Length: 76
Transcript: NM_020322
Intron
Length: 490
Transcript: NM_020322
Length: 490
Transcript: NM_020322
Intron
Length: 81
Transcript: NM_020322
Length: 81
Transcript: NM_020322
Intron
Length: 103
Transcript: NM_020322
Length: 103
Transcript: NM_020322
Intron
Length: 336
Transcript: NM_020322
Length: 336
Transcript: NM_020322
refseq_ACCN3.F1
AGCCATCGAACCCAAGTTC
AGCCATCGAACCCAAGTTC
refseq_ACCN3.R1
TGTGTGACAAGGTAGCAGGTG
TGTGTGACAAGGTAGCAGGTG