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Supplementary data
RBFOX2 enforces the mesenchymal splicing signature in normal and cancer tissues
2. Full RefSeq screen / 9 cell lines
Transcript map
: ACOX3 HS 578T
Exon
Length: 78
Transcript: NM_001101667
Length: 78
Transcript: NM_001101667
Exon
Length: 158
Transcript: NM_001101667
Length: 158
Transcript: NM_001101667
Exon
Length: 234
Transcript: NM_001101667
Length: 234
Transcript: NM_001101667
Exon
Length: 75
Transcript: NM_001101667
Length: 75
Transcript: NM_001101667
Exon
Length: 90
Transcript: NM_001101667
Length: 90
Transcript: NM_001101667
Exon
Length: 144
Transcript: NM_001101667
Length: 144
Transcript: NM_001101667
Exon
Length: 89
Transcript: NM_001101667
Length: 89
Transcript: NM_001101667
Exon
Length: 97
Transcript: NM_001101667
Length: 97
Transcript: NM_001101667
Exon
Length: 183
Transcript: NM_001101667
Length: 183
Transcript: NM_001101667
Exon
Length: 123
Transcript: NM_001101667
Length: 123
Transcript: NM_001101667
Exon
Length: 121
Transcript: NM_001101667
Length: 121
Transcript: NM_001101667
Exon
Length: 123
Transcript: NM_001101667
Length: 123
Transcript: NM_001101667
Exon
Length: 114
Transcript: NM_001101667
Length: 114
Transcript: NM_001101667
Exon
Length: 116
Transcript: NM_001101667
Length: 116
Transcript: NM_001101667
Exon
Length: 175
Transcript: NM_001101667
Length: 175
Transcript: NM_001101667
Exon
Length: 87
Transcript: NM_001101667
Length: 87
Transcript: NM_001101667
Exon
Length: 799
Transcript: NM_001101667
Length: 799
Transcript: NM_001101667
Intron
Length: 24112
Transcript: NM_001101667
Length: 24112
Transcript: NM_001101667
Intron
Length: 378
Transcript: NM_001101667
Length: 378
Transcript: NM_001101667
Intron
Length: 837
Transcript: NM_001101667
Length: 837
Transcript: NM_001101667
Intron
Length: 472
Transcript: NM_001101667
Length: 472
Transcript: NM_001101667
Intron
Length: 3936
Transcript: NM_001101667
Length: 3936
Transcript: NM_001101667
Intron
Length: 4168
Transcript: NM_001101667
Length: 4168
Transcript: NM_001101667
Intron
Length: 6302
Transcript: NM_001101667
Length: 6302
Transcript: NM_001101667
Intron
Length: 2436
Transcript: NM_001101667
Length: 2436
Transcript: NM_001101667
Intron
Length: 2194
Transcript: NM_001101667
Length: 2194
Transcript: NM_001101667
Intron
Length: 2166
Transcript: NM_001101667
Length: 2166
Transcript: NM_001101667
Intron
Length: 2598
Transcript: NM_001101667
Length: 2598
Transcript: NM_001101667
Intron
Length: 325
Transcript: NM_001101667
Length: 325
Transcript: NM_001101667
Intron
Length: 7565
Transcript: NM_001101667
Length: 7565
Transcript: NM_001101667
Intron
Length: 6339
Transcript: NM_001101667
Length: 6339
Transcript: NM_001101667
Intron
Length: 3983
Transcript: NM_001101667
Length: 3983
Transcript: NM_001101667
Intron
Length: 3827
Transcript: NM_001101667
Length: 3827
Transcript: NM_001101667
Reaction
Expected peak: 367
34M
rs.ACOX3.F1
rs.ACOX3.R1
Expected peak: 367
34M
rs.ACOX3.F1
rs.ACOX3.R1
Exon
Length: 78
Transcript: NM_003501
Length: 78
Transcript: NM_003501
Exon
Length: 158
Transcript: NM_003501
Length: 158
Transcript: NM_003501
Exon
Length: 234
Transcript: NM_003501
Length: 234
Transcript: NM_003501
Exon
Length: 75
Transcript: NM_003501
Length: 75
Transcript: NM_003501
Exon
Length: 90
Transcript: NM_003501
Length: 90
Transcript: NM_003501
Exon
Length: 144
Transcript: NM_003501
Length: 144
Transcript: NM_003501
Exon
Length: 89
Transcript: NM_003501
Length: 89
Transcript: NM_003501
Exon
Length: 97
Transcript: NM_003501
Length: 97
Transcript: NM_003501
Exon
Length: 183
Transcript: NM_003501
Length: 183
Transcript: NM_003501
Exon
Length: 123
Transcript: NM_003501
Length: 123
Transcript: NM_003501
Exon
Length: 121
Transcript: NM_003501
Length: 121
Transcript: NM_003501
Exon
Length: 123
Transcript: NM_003501
Length: 123
Transcript: NM_003501
Exon
Length: 114
Transcript: NM_003501
Length: 114
Transcript: NM_003501
Exon
Length: 116
Transcript: NM_003501
Length: 116
Transcript: NM_003501
Exon
Length: 175
Transcript: NM_003501
Length: 175
Transcript: NM_003501
Exon
Length: 68
Transcript: NM_003501
Length: 68
Transcript: NM_003501
Exon
Length: 87
Transcript: NM_003501
Length: 87
Transcript: NM_003501
Exon
Length: 799
Transcript: NM_003501
Length: 799
Transcript: NM_003501
Intron
Length: 24112
Transcript: NM_003501
Length: 24112
Transcript: NM_003501
Intron
Length: 378
Transcript: NM_003501
Length: 378
Transcript: NM_003501
Intron
Length: 837
Transcript: NM_003501
Length: 837
Transcript: NM_003501
Intron
Length: 472
Transcript: NM_003501
Length: 472
Transcript: NM_003501
Intron
Length: 3936
Transcript: NM_003501
Length: 3936
Transcript: NM_003501
Intron
Length: 4168
Transcript: NM_003501
Length: 4168
Transcript: NM_003501
Intron
Length: 6302
Transcript: NM_003501
Length: 6302
Transcript: NM_003501
Intron
Length: 2436
Transcript: NM_003501
Length: 2436
Transcript: NM_003501
Intron
Length: 2194
Transcript: NM_003501
Length: 2194
Transcript: NM_003501
Intron
Length: 2166
Transcript: NM_003501
Length: 2166
Transcript: NM_003501
Intron
Length: 2598
Transcript: NM_003501
Length: 2598
Transcript: NM_003501
Intron
Length: 325
Transcript: NM_003501
Length: 325
Transcript: NM_003501
Intron
Length: 7565
Transcript: NM_003501
Length: 7565
Transcript: NM_003501
Intron
Length: 6339
Transcript: NM_003501
Length: 6339
Transcript: NM_003501
Intron
Length: 1349
Transcript: NM_003501
Length: 1349
Transcript: NM_003501
Intron
Length: 2566
Transcript: NM_003501
Length: 2566
Transcript: NM_003501
Intron
Length: 3827
Transcript: NM_003501
Length: 3827
Transcript: NM_003501
Reaction
Expected peak: 435
85M
rs.ACOX3.F1
rs.ACOX3.R1
Expected peak: 435
85M
rs.ACOX3.F1
rs.ACOX3.R1
rs.ACOX3.F1
CCGACTGCTTGGACTCTGCA
CCGACTGCTTGGACTCTGCA
rs.ACOX3.R1
GAACAAAGTCAGGAGGAGCGAT
GAACAAAGTCAGGAGGAGCGAT