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Home Supplementary data RBFOX2 enforces the mesenchymal splicing signature in normal and cancer tissues 7. 26 switch-like targets from epithelium and mesenchyme (fetal colon) in RBFOX2, MBNL1, PTBP and ESRP knockdowns permalink
7. 26 switch-like targets from epithelium and mesenchyme (fetal colon) in RBFOX2, MBNL1, PTBP and ESRP knockdowns ⚙
Transcript map : MYOF Control (MDA-MB-231)
  • refseq_FER1L3.F1 / refseq_FER1L3.R1 (CM027536 A1) : Curve | Curve set
Exon
Length: 176
Transcript: NM_013451
Exon
Length: 56
Transcript: NM_013451
Exon
Length: 92
Transcript: NM_013451
Exon
Length: 109
Transcript: NM_013451
Exon
Length: 88
Transcript: NM_013451
Exon
Length: 167
Transcript: NM_013451
Exon
Length: 129
Transcript: NM_013451
Exon
Length: 63
Transcript: NM_013451
Exon
Length: 51
Transcript: NM_013451
Exon
Length: 31
Transcript: NM_013451
Exon
Length: 116
Transcript: NM_013451
Exon
Length: 127
Transcript: NM_013451
Exon
Length: 104
Transcript: NM_013451
Exon
Length: 69
Transcript: NM_013451
Exon
Length: 44
Transcript: NM_013451
Exon
Length: 83
Transcript: NM_013451
Exon
Length: 39
Transcript: NM_013451
Exon
Length: 125
Transcript: NM_013451
Exon
Length: 117
Transcript: NM_013451
Exon
Length: 178
Transcript: NM_013451
Exon
Length: 125
Transcript: NM_013451
Exon
Length: 107
Transcript: NM_013451
Exon
Length: 193
Transcript: NM_013451
Exon
Length: 156
Transcript: NM_013451
Exon
Length: 132
Transcript: NM_013451
Exon
Length: 164
Transcript: NM_013451
Exon
Length: 115
Transcript: NM_013451
Exon
Length: 106
Transcript: NM_013451
Exon
Length: 146
Transcript: NM_013451
Exon
Length: 174
Transcript: NM_013451
Exon
Length: 109
Transcript: NM_013451
Exon
Length: 78
Transcript: NM_013451
Exon
Length: 182
Transcript: NM_013451
Exon
Length: 159
Transcript: NM_013451
Exon
Length: 99
Transcript: NM_013451
Exon
Length: 162
Transcript: NM_013451
Exon
Length: 166
Transcript: NM_013451
Exon
Length: 77
Transcript: NM_013451
Exon
Length: 12
Transcript: NM_013451
Exon
Length: 99
Transcript: NM_013451
Exon
Length: 126
Transcript: NM_013451
Exon
Length: 156
Transcript: NM_013451
Exon
Length: 92
Transcript: NM_013451
Exon
Length: 171
Transcript: NM_013451
Exon
Length: 149
Transcript: NM_013451
Exon
Length: 140
Transcript: NM_013451
Exon
Length: 89
Transcript: NM_013451
Exon
Length: 96
Transcript: NM_013451
Exon
Length: 142
Transcript: NM_013451
Exon
Length: 100
Transcript: NM_013451
Exon
Length: 191
Transcript: NM_013451
Exon
Length: 110
Transcript: NM_013451
Exon
Length: 148
Transcript: NM_013451
Exon
Length: 573
Transcript: NM_013451
Intron
Length: 25169
Transcript: NM_013451
Intron
Length: 4740
Transcript: NM_013451
Intron
Length: 20533
Transcript: NM_013451
Intron
Length: 5249
Transcript: NM_013451
Intron
Length: 16331
Transcript: NM_013451
Intron
Length: 657
Transcript: NM_013451
Intron
Length: 4567
Transcript: NM_013451
Intron
Length: 83
Transcript: NM_013451
Intron
Length: 1132
Transcript: NM_013451
Intron
Length: 512
Transcript: NM_013451
Intron
Length: 687
Transcript: NM_013451
Intron
Length: 1922
Transcript: NM_013451
Intron
Length: 1935
Transcript: NM_013451
Intron
Length: 97
Transcript: NM_013451
Intron
Length: 1022
Transcript: NM_013451
Intron
Length: 3186
Transcript: NM_013451
Intron
Length: 3762
Transcript: NM_013451
Intron
Length: 1116
Transcript: NM_013451
Intron
Length: 6400
Transcript: NM_013451
Intron
Length: 1231
Transcript: NM_013451
Intron
Length: 2433
Transcript: NM_013451
Intron
Length: 2367
Transcript: NM_013451
Intron
Length: 1677
Transcript: NM_013451
Intron
Length: 3153
Transcript: NM_013451
Intron
Length: 3089
Transcript: NM_013451
Intron
Length: 2316
Transcript: NM_013451
Intron
Length: 2403
Transcript: NM_013451
Intron
Length: 1473
Transcript: NM_013451
Intron
Length: 2984
Transcript: NM_013451
Intron
Length: 938
Transcript: NM_013451
Intron
Length: 1739
Transcript: NM_013451
Intron
Length: 1964
Transcript: NM_013451
Intron
Length: 93
Transcript: NM_013451
Intron
Length: 117
Transcript: NM_013451
Intron
Length: 1227
Transcript: NM_013451
Intron
Length: 2025
Transcript: NM_013451
Intron
Length: 3684
Transcript: NM_013451
Intron
Length: 3691
Transcript: NM_013451
Intron
Length: 2239
Transcript: NM_013451
Intron
Length: 1768
Transcript: NM_013451
Intron
Length: 2007
Transcript: NM_013451
Intron
Length: 445
Transcript: NM_013451
Intron
Length: 3386
Transcript: NM_013451
Intron
Length: 752
Transcript: NM_013451
Intron
Length: 2797
Transcript: NM_013451
Intron
Length: 2467
Transcript: NM_013451
Intron
Length: 96
Transcript: NM_013451
Intron
Length: 3064
Transcript: NM_013451
Intron
Length: 3058
Transcript: NM_013451
Intron
Length: 3503
Transcript: NM_013451
Intron
Length: 2376
Transcript: NM_013451
Intron
Length: 366
Transcript: NM_013451
Intron
Length: 3018
Transcript: NM_013451
Reaction
Expected peak: 255
51.1M
refseq_FER1L3.F1
refseq_FER1L3.R1
Exon
Length: 176
Transcript: NM_133337
Exon
Length: 56
Transcript: NM_133337
Exon
Length: 92
Transcript: NM_133337
Exon
Length: 109
Transcript: NM_133337
Exon
Length: 88
Transcript: NM_133337
Exon
Length: 167
Transcript: NM_133337
Exon
Length: 129
Transcript: NM_133337
Exon
Length: 63
Transcript: NM_133337
Exon
Length: 51
Transcript: NM_133337
Exon
Length: 31
Transcript: NM_133337
Exon
Length: 116
Transcript: NM_133337
Exon
Length: 127
Transcript: NM_133337
Exon
Length: 104
Transcript: NM_133337
Exon
Length: 69
Transcript: NM_133337
Exon
Length: 44
Transcript: NM_133337
Exon
Length: 83
Transcript: NM_133337
Exon
Length: 125
Transcript: NM_133337
Exon
Length: 117
Transcript: NM_133337
Exon
Length: 178
Transcript: NM_133337
Exon
Length: 125
Transcript: NM_133337
Exon
Length: 107
Transcript: NM_133337
Exon
Length: 193
Transcript: NM_133337
Exon
Length: 156
Transcript: NM_133337
Exon
Length: 132
Transcript: NM_133337
Exon
Length: 164
Transcript: NM_133337
Exon
Length: 115
Transcript: NM_133337
Exon
Length: 106
Transcript: NM_133337
Exon
Length: 146
Transcript: NM_133337
Exon
Length: 174
Transcript: NM_133337
Exon
Length: 109
Transcript: NM_133337
Exon
Length: 78
Transcript: NM_133337
Exon
Length: 182
Transcript: NM_133337
Exon
Length: 159
Transcript: NM_133337
Exon
Length: 99
Transcript: NM_133337
Exon
Length: 162
Transcript: NM_133337
Exon
Length: 166
Transcript: NM_133337
Exon
Length: 77
Transcript: NM_133337
Exon
Length: 12
Transcript: NM_133337
Exon
Length: 99
Transcript: NM_133337
Exon
Length: 126
Transcript: NM_133337
Exon
Length: 156
Transcript: NM_133337
Exon
Length: 92
Transcript: NM_133337
Exon
Length: 171
Transcript: NM_133337
Exon
Length: 149
Transcript: NM_133337
Exon
Length: 140
Transcript: NM_133337
Exon
Length: 89
Transcript: NM_133337
Exon
Length: 96
Transcript: NM_133337
Exon
Length: 142
Transcript: NM_133337
Exon
Length: 100
Transcript: NM_133337
Exon
Length: 191
Transcript: NM_133337
Exon
Length: 110
Transcript: NM_133337
Exon
Length: 148
Transcript: NM_133337
Exon
Length: 573
Transcript: NM_133337
Intron
Length: 25169
Transcript: NM_133337
Intron
Length: 4740
Transcript: NM_133337
Intron
Length: 20533
Transcript: NM_133337
Intron
Length: 5249
Transcript: NM_133337
Intron
Length: 16331
Transcript: NM_133337
Intron
Length: 657
Transcript: NM_133337
Intron
Length: 4567
Transcript: NM_133337
Intron
Length: 83
Transcript: NM_133337
Intron
Length: 1132
Transcript: NM_133337
Intron
Length: 512
Transcript: NM_133337
Intron
Length: 687
Transcript: NM_133337
Intron
Length: 1922
Transcript: NM_133337
Intron
Length: 1935
Transcript: NM_133337
Intron
Length: 97
Transcript: NM_133337
Intron
Length: 1022
Transcript: NM_133337
Intron
Length: 6987
Transcript: NM_133337
Intron
Length: 1116
Transcript: NM_133337
Intron
Length: 6400
Transcript: NM_133337
Intron
Length: 1231
Transcript: NM_133337
Intron
Length: 2433
Transcript: NM_133337
Intron
Length: 2367
Transcript: NM_133337
Intron
Length: 1677
Transcript: NM_133337
Intron
Length: 3153
Transcript: NM_133337
Intron
Length: 3089
Transcript: NM_133337
Intron
Length: 2316
Transcript: NM_133337
Intron
Length: 2403
Transcript: NM_133337
Intron
Length: 1473
Transcript: NM_133337
Intron
Length: 2984
Transcript: NM_133337
Intron
Length: 938
Transcript: NM_133337
Intron
Length: 1739
Transcript: NM_133337
Intron
Length: 1964
Transcript: NM_133337
Intron
Length: 93
Transcript: NM_133337
Intron
Length: 117
Transcript: NM_133337
Intron
Length: 1227
Transcript: NM_133337
Intron
Length: 2025
Transcript: NM_133337
Intron
Length: 3684
Transcript: NM_133337
Intron
Length: 3691
Transcript: NM_133337
Intron
Length: 2239
Transcript: NM_133337
Intron
Length: 1768
Transcript: NM_133337
Intron
Length: 2007
Transcript: NM_133337
Intron
Length: 445
Transcript: NM_133337
Intron
Length: 3386
Transcript: NM_133337
Intron
Length: 752
Transcript: NM_133337
Intron
Length: 2797
Transcript: NM_133337
Intron
Length: 2467
Transcript: NM_133337
Intron
Length: 96
Transcript: NM_133337
Intron
Length: 3064
Transcript: NM_133337
Intron
Length: 3058
Transcript: NM_133337
Intron
Length: 3503
Transcript: NM_133337
Intron
Length: 2376
Transcript: NM_133337
Intron
Length: 366
Transcript: NM_133337
Intron
Length: 3018
Transcript: NM_133337
Reaction
Expected peak: 216
0M
refseq_FER1L3.F1
refseq_FER1L3.R1
refseq_FER1L3.R1
TCAGGTAACAAGGTCCAAACG
refseq_FER1L3.F1
AGTGGAATCAGGTCGTCAATCT

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