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Home Supplementary data RBFOX2 enforces the mesenchymal splicing signature in normal and cancer tissues 7. 26 switch-like targets from epithelium and mesenchyme (fetal colon) in RBFOX2, MBNL1, PTBP and ESRP knockdowns permalink
7. 26 switch-like targets from epithelium and mesenchyme (fetal colon) in RBFOX2, MBNL1, PTBP and ESRP knockdowns ⚙
Transcript map : GARNL1 Control (MDA-MB-231)
  • refseq_GARNL1.F1 / refseq_GARNL1.R1 (CM027536 A6) : Curve | Curve set
Exon
Length: 497
Transcript: NM_014990
Exon
Length: 111
Transcript: NM_014990
Exon
Length: 50
Transcript: NM_014990
Exon
Length: 58
Transcript: NM_014990
Exon
Length: 44
Transcript: NM_014990
Exon
Length: 178
Transcript: NM_014990
Exon
Length: 116
Transcript: NM_014990
Exon
Length: 139
Transcript: NM_014990
Exon
Length: 209
Transcript: NM_014990
Exon
Length: 240
Transcript: NM_014990
Exon
Length: 198
Transcript: NM_014990
Exon
Length: 138
Transcript: NM_014990
Exon
Length: 149
Transcript: NM_014990
Exon
Length: 130
Transcript: NM_014990
Exon
Length: 238
Transcript: NM_014990
Exon
Length: 162
Transcript: NM_014990
Exon
Length: 168
Transcript: NM_014990
Exon
Length: 125
Transcript: NM_014990
Exon
Length: 217
Transcript: NM_014990
Exon
Length: 177
Transcript: NM_014990
Exon
Length: 153
Transcript: NM_014990
Exon
Length: 194
Transcript: NM_014990
Exon
Length: 99
Transcript: NM_014990
Exon
Length: 156
Transcript: NM_014990
Exon
Length: 129
Transcript: NM_014990
Exon
Length: 126
Transcript: NM_014990
Exon
Length: 59
Transcript: NM_014990
Exon
Length: 109
Transcript: NM_014990
Exon
Length: 111
Transcript: NM_014990
Exon
Length: 69
Transcript: NM_014990
Exon
Length: 135
Transcript: NM_014990
Exon
Length: 184
Transcript: NM_014990
Exon
Length: 862
Transcript: NM_014990
Exon
Length: 72
Transcript: NM_014990
Exon
Length: 124
Transcript: NM_014990
Exon
Length: 156
Transcript: NM_014990
Exon
Length: 159
Transcript: NM_014990
Exon
Length: 128
Transcript: NM_014990
Exon
Length: 125
Transcript: NM_014990
Exon
Length: 31
Transcript: NM_014990
Exon
Length: 1339
Transcript: NM_014990
Intron
Length: 32984
Transcript: NM_014990
Intron
Length: 579
Transcript: NM_014990
Intron
Length: 4006
Transcript: NM_014990
Intron
Length: 8188
Transcript: NM_014990
Intron
Length: 1703
Transcript: NM_014990
Intron
Length: 3920
Transcript: NM_014990
Intron
Length: 4630
Transcript: NM_014990
Intron
Length: 1333
Transcript: NM_014990
Intron
Length: 1657
Transcript: NM_014990
Intron
Length: 6019
Transcript: NM_014990
Intron
Length: 3717
Transcript: NM_014990
Intron
Length: 10002
Transcript: NM_014990
Intron
Length: 3208
Transcript: NM_014990
Intron
Length: 1759
Transcript: NM_014990
Intron
Length: 1177
Transcript: NM_014990
Intron
Length: 31684
Transcript: NM_014990
Intron
Length: 3169
Transcript: NM_014990
Intron
Length: 1396
Transcript: NM_014990
Intron
Length: 943
Transcript: NM_014990
Intron
Length: 5706
Transcript: NM_014990
Intron
Length: 3240
Transcript: NM_014990
Intron
Length: 237
Transcript: NM_014990
Intron
Length: 1157
Transcript: NM_014990
Intron
Length: 1349
Transcript: NM_014990
Intron
Length: 6621
Transcript: NM_014990
Intron
Length: 5445
Transcript: NM_014990
Intron
Length: 3222
Transcript: NM_014990
Intron
Length: 1329
Transcript: NM_014990
Intron
Length: 2493
Transcript: NM_014990
Intron
Length: 16206
Transcript: NM_014990
Intron
Length: 706
Transcript: NM_014990
Intron
Length: 6622
Transcript: NM_014990
Intron
Length: 1657
Transcript: NM_014990
Intron
Length: 19651
Transcript: NM_014990
Intron
Length: 9796
Transcript: NM_014990
Intron
Length: 22915
Transcript: NM_014990
Intron
Length: 1815
Transcript: NM_014990
Intron
Length: 21382
Transcript: NM_014990
Intron
Length: 571
Transcript: NM_014990
Intron
Length: 8817
Transcript: NM_014990
Reaction
Expected peak: 152
63.3M
refseq_GARNL1.F1
refseq_GARNL1.R1
Exon
Length: 497
Transcript: NM_194301
Exon
Length: 111
Transcript: NM_194301
Exon
Length: 50
Transcript: NM_194301
Exon
Length: 58
Transcript: NM_194301
Exon
Length: 44
Transcript: NM_194301
Exon
Length: 178
Transcript: NM_194301
Exon
Length: 116
Transcript: NM_194301
Exon
Length: 139
Transcript: NM_194301
Exon
Length: 209
Transcript: NM_194301
Exon
Length: 240
Transcript: NM_194301
Exon
Length: 198
Transcript: NM_194301
Exon
Length: 138
Transcript: NM_194301
Exon
Length: 149
Transcript: NM_194301
Exon
Length: 130
Transcript: NM_194301
Exon
Length: 238
Transcript: NM_194301
Exon
Length: 162
Transcript: NM_194301
Exon
Length: 168
Transcript: NM_194301
Exon
Length: 125
Transcript: NM_194301
Exon
Length: 217
Transcript: NM_194301
Exon
Length: 177
Transcript: NM_194301
Exon
Length: 153
Transcript: NM_194301
Exon
Length: 194
Transcript: NM_194301
Exon
Length: 99
Transcript: NM_194301
Exon
Length: 156
Transcript: NM_194301
Exon
Length: 129
Transcript: NM_194301
Exon
Length: 126
Transcript: NM_194301
Exon
Length: 59
Transcript: NM_194301
Exon
Length: 109
Transcript: NM_194301
Exon
Length: 111
Transcript: NM_194301
Exon
Length: 69
Transcript: NM_194301
Exon
Length: 135
Transcript: NM_194301
Exon
Length: 184
Transcript: NM_194301
Exon
Length: 862
Transcript: NM_194301
Exon
Length: 72
Transcript: NM_194301
Exon
Length: 124
Transcript: NM_194301
Exon
Length: 156
Transcript: NM_194301
Exon
Length: 159
Transcript: NM_194301
Exon
Length: 128
Transcript: NM_194301
Exon
Length: 125
Transcript: NM_194301
Exon
Length: 1339
Transcript: NM_194301
Intron
Length: 32984
Transcript: NM_194301
Intron
Length: 579
Transcript: NM_194301
Intron
Length: 4006
Transcript: NM_194301
Intron
Length: 8188
Transcript: NM_194301
Intron
Length: 1703
Transcript: NM_194301
Intron
Length: 3920
Transcript: NM_194301
Intron
Length: 4630
Transcript: NM_194301
Intron
Length: 1333
Transcript: NM_194301
Intron
Length: 1657
Transcript: NM_194301
Intron
Length: 6019
Transcript: NM_194301
Intron
Length: 3717
Transcript: NM_194301
Intron
Length: 10002
Transcript: NM_194301
Intron
Length: 3208
Transcript: NM_194301
Intron
Length: 1759
Transcript: NM_194301
Intron
Length: 1177
Transcript: NM_194301
Intron
Length: 31684
Transcript: NM_194301
Intron
Length: 3169
Transcript: NM_194301
Intron
Length: 1396
Transcript: NM_194301
Intron
Length: 943
Transcript: NM_194301
Intron
Length: 5706
Transcript: NM_194301
Intron
Length: 3240
Transcript: NM_194301
Intron
Length: 237
Transcript: NM_194301
Intron
Length: 1157
Transcript: NM_194301
Intron
Length: 1349
Transcript: NM_194301
Intron
Length: 6621
Transcript: NM_194301
Intron
Length: 5445
Transcript: NM_194301
Intron
Length: 3222
Transcript: NM_194301
Intron
Length: 1329
Transcript: NM_194301
Intron
Length: 2493
Transcript: NM_194301
Intron
Length: 16206
Transcript: NM_194301
Intron
Length: 706
Transcript: NM_194301
Intron
Length: 6622
Transcript: NM_194301
Intron
Length: 1657
Transcript: NM_194301
Intron
Length: 19651
Transcript: NM_194301
Intron
Length: 9796
Transcript: NM_194301
Intron
Length: 22915
Transcript: NM_194301
Intron
Length: 1815
Transcript: NM_194301
Intron
Length: 21382
Transcript: NM_194301
Intron
Length: 9419
Transcript: NM_194301
Reaction
Expected peak: 121
0M
refseq_GARNL1.F1
refseq_GARNL1.R1
refseq_GARNL1.F1
CCCTACCACCATTTACCATCTG
refseq_GARNL1.R1
TGCTAGTTCGAGGAGACATTGG

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