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Supplementary data
Splicing arrays reveal novel RBM10 targets, including SMN2 pre-mRNA
2. Array-192 -- RBM10 Knockdowns in BJ-TIELF, MCF-7, MDA-MB-231, SKOV-3, and PC-3
Transcript map
: ABL2 CTRL BJT exp38
Exon
Length: 144
Transcript: NM_001100108
Length: 144
Transcript: NM_001100108
Exon
Length: 63
Transcript: NM_001100108
Length: 63
Transcript: NM_001100108
Exon
Length: 171
Transcript: NM_001100108
Length: 171
Transcript: NM_001100108
Exon
Length: 296
Transcript: NM_001100108
Length: 296
Transcript: NM_001100108
Exon
Length: 273
Transcript: NM_001100108
Length: 273
Transcript: NM_001100108
Exon
Length: 85
Transcript: NM_001100108
Length: 85
Transcript: NM_001100108
Exon
Length: 178
Transcript: NM_001100108
Length: 178
Transcript: NM_001100108
Exon
Length: 185
Transcript: NM_001100108
Length: 185
Transcript: NM_001100108
Exon
Length: 153
Transcript: NM_001100108
Length: 153
Transcript: NM_001100108
Exon
Length: 90
Transcript: NM_001100108
Length: 90
Transcript: NM_001100108
Exon
Length: 174
Transcript: NM_001100108
Length: 174
Transcript: NM_001100108
Exon
Length: 10115
Transcript: NM_001100108
Length: 10115
Transcript: NM_001100108
Intron
Length: 9558
Transcript: NM_001100108
Length: 9558
Transcript: NM_001100108
Intron
Length: 1830
Transcript: NM_001100108
Length: 1830
Transcript: NM_001100108
Intron
Length: 4638
Transcript: NM_001100108
Length: 4638
Transcript: NM_001100108
Intron
Length: 4509
Transcript: NM_001100108
Length: 4509
Transcript: NM_001100108
Intron
Length: 1320
Transcript: NM_001100108
Length: 1320
Transcript: NM_001100108
Intron
Length: 1425
Transcript: NM_001100108
Length: 1425
Transcript: NM_001100108
Intron
Length: 1070
Transcript: NM_001100108
Length: 1070
Transcript: NM_001100108
Intron
Length: 2301
Transcript: NM_001100108
Length: 2301
Transcript: NM_001100108
Intron
Length: 2479
Transcript: NM_001100108
Length: 2479
Transcript: NM_001100108
Intron
Length: 1853
Transcript: NM_001100108
Length: 1853
Transcript: NM_001100108
Intron
Length: 840
Transcript: NM_001100108
Length: 840
Transcript: NM_001100108
Reaction
Expected peak: 267
22.2M
rs.ABL2.F1
rs.ABL2.R1
Expected peak: 267
22.2M
rs.ABL2.F1
rs.ABL2.R1
Exon
Length: 144
Transcript: NM_005158
Length: 144
Transcript: NM_005158
Exon
Length: 171
Transcript: NM_005158
Length: 171
Transcript: NM_005158
Exon
Length: 296
Transcript: NM_005158
Length: 296
Transcript: NM_005158
Exon
Length: 273
Transcript: NM_005158
Length: 273
Transcript: NM_005158
Exon
Length: 85
Transcript: NM_005158
Length: 85
Transcript: NM_005158
Exon
Length: 178
Transcript: NM_005158
Length: 178
Transcript: NM_005158
Exon
Length: 185
Transcript: NM_005158
Length: 185
Transcript: NM_005158
Exon
Length: 153
Transcript: NM_005158
Length: 153
Transcript: NM_005158
Exon
Length: 90
Transcript: NM_005158
Length: 90
Transcript: NM_005158
Exon
Length: 174
Transcript: NM_005158
Length: 174
Transcript: NM_005158
Exon
Length: 10115
Transcript: NM_005158
Length: 10115
Transcript: NM_005158
Intron
Length: 11451
Transcript: NM_005158
Length: 11451
Transcript: NM_005158
Intron
Length: 4638
Transcript: NM_005158
Length: 4638
Transcript: NM_005158
Intron
Length: 4509
Transcript: NM_005158
Length: 4509
Transcript: NM_005158
Intron
Length: 1320
Transcript: NM_005158
Length: 1320
Transcript: NM_005158
Intron
Length: 1425
Transcript: NM_005158
Length: 1425
Transcript: NM_005158
Intron
Length: 1070
Transcript: NM_005158
Length: 1070
Transcript: NM_005158
Intron
Length: 2301
Transcript: NM_005158
Length: 2301
Transcript: NM_005158
Intron
Length: 2479
Transcript: NM_005158
Length: 2479
Transcript: NM_005158
Intron
Length: 1853
Transcript: NM_005158
Length: 1853
Transcript: NM_005158
Intron
Length: 840
Transcript: NM_005158
Length: 840
Transcript: NM_005158
Reaction
Expected peak: 204
59.8M
rs.ABL2.F1
rs.ABL2.R1
Expected peak: 204
59.8M
rs.ABL2.F1
rs.ABL2.R1
Exon
Length: 392
Transcript: NM_007314
Length: 392
Transcript: NM_007314
Exon
Length: 63
Transcript: NM_007314
Length: 63
Transcript: NM_007314
Exon
Length: 171
Transcript: NM_007314
Length: 171
Transcript: NM_007314
Exon
Length: 296
Transcript: NM_007314
Length: 296
Transcript: NM_007314
Exon
Length: 273
Transcript: NM_007314
Length: 273
Transcript: NM_007314
Exon
Length: 85
Transcript: NM_007314
Length: 85
Transcript: NM_007314
Exon
Length: 178
Transcript: NM_007314
Length: 178
Transcript: NM_007314
Exon
Length: 185
Transcript: NM_007314
Length: 185
Transcript: NM_007314
Exon
Length: 153
Transcript: NM_007314
Length: 153
Transcript: NM_007314
Exon
Length: 90
Transcript: NM_007314
Length: 90
Transcript: NM_007314
Exon
Length: 174
Transcript: NM_007314
Length: 174
Transcript: NM_007314
Exon
Length: 10115
Transcript: NM_007314
Length: 10115
Transcript: NM_007314
Intron
Length: 95866
Transcript: NM_007314
Length: 95866
Transcript: NM_007314
Intron
Length: 1830
Transcript: NM_007314
Length: 1830
Transcript: NM_007314
Intron
Length: 4638
Transcript: NM_007314
Length: 4638
Transcript: NM_007314
Intron
Length: 4509
Transcript: NM_007314
Length: 4509
Transcript: NM_007314
Intron
Length: 1320
Transcript: NM_007314
Length: 1320
Transcript: NM_007314
Intron
Length: 1425
Transcript: NM_007314
Length: 1425
Transcript: NM_007314
Intron
Length: 1070
Transcript: NM_007314
Length: 1070
Transcript: NM_007314
Intron
Length: 2301
Transcript: NM_007314
Length: 2301
Transcript: NM_007314
Intron
Length: 2479
Transcript: NM_007314
Length: 2479
Transcript: NM_007314
Intron
Length: 1853
Transcript: NM_007314
Length: 1853
Transcript: NM_007314
Intron
Length: 840
Transcript: NM_007314
Length: 840
Transcript: NM_007314
rs.ABL2.R1
AAGTGCAACGAAGAGATTAGGGT
AAGTGCAACGAAGAGATTAGGGT
rs.ABL2.F1
AGTTATGGCAGAGATCAGGACAC
AGTTATGGCAGAGATCAGGACAC