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Sample alternative splicing annotation data 
Transcript map : APAF1 SA
Exon
Length: 536
Transcript: APAF1.aAug05
Exon
Length: 179
Transcript: APAF1.aAug05
Exon
Length: 190
Transcript: APAF1.aAug05
Exon
Length: 198
Transcript: APAF1.aAug05
Exon
Length: 184
Transcript: APAF1.aAug05
Exon
Length: 113
Transcript: APAF1.aAug05
Exon
Length: 132
Transcript: APAF1.aAug05
Exon
Length: 239
Transcript: APAF1.aAug05
Exon
Length: 168
Transcript: APAF1.aAug05
Exon
Length: 132
Transcript: APAF1.aAug05
Exon
Length: 114
Transcript: APAF1.aAug05
Exon
Length: 185
Transcript: APAF1.aAug05
Exon
Length: 127
Transcript: APAF1.aAug05
Exon
Length: 126
Transcript: APAF1.aAug05
Exon
Length: 132
Transcript: APAF1.aAug05
Exon
Length: 126
Transcript: APAF1.aAug05
Exon
Length: 162
Transcript: APAF1.aAug05
Exon
Length: 129
Transcript: APAF1.aAug05
Exon
Length: 126
Transcript: APAF1.aAug05
Exon
Length: 120
Transcript: APAF1.aAug05
Exon
Length: 117
Transcript: APAF1.aAug05
Exon
Length: 126
Transcript: APAF1.aAug05
Exon
Length: 120
Transcript: APAF1.aAug05
Exon
Length: 126
Transcript: APAF1.aAug05
Exon
Length: 126
Transcript: APAF1.aAug05
Exon
Length: 144
Transcript: APAF1.aAug05
Exon
Length: 3013
Transcript: APAF1.aAug05
Intron
Length: 2483
Transcript: APAF1.aAug05
Intron
Length: 128
Transcript: APAF1.aAug05
Intron
Length: 671
Transcript: APAF1.aAug05
Intron
Length: 9475
Transcript: APAF1.aAug05
Intron
Length: 3112
Transcript: APAF1.aAug05
Intron
Length: 106
Transcript: APAF1.aAug05
Intron
Length: 2746
Transcript: APAF1.aAug05
Intron
Length: 398
Transcript: APAF1.aAug05
Intron
Length: 1155
Transcript: APAF1.aAug05
Intron
Length: 3328
Transcript: APAF1.aAug05
Intron
Length: 448
Transcript: APAF1.aAug05
Intron
Length: 5705
Transcript: APAF1.aAug05
Intron
Length: 2725
Transcript: APAF1.aAug05
Intron
Length: 2740
Transcript: APAF1.aAug05
Intron
Length: 3473
Transcript: APAF1.aAug05
Intron
Length: 12534
Transcript: APAF1.aAug05
Intron
Length: 3801
Transcript: APAF1.aAug05
Intron
Length: 2985
Transcript: APAF1.aAug05
Intron
Length: 1974
Transcript: APAF1.aAug05
Intron
Length: 3614
Transcript: APAF1.aAug05
Intron
Length: 2991
Transcript: APAF1.aAug05
Intron
Length: 7640
Transcript: APAF1.aAug05
Intron
Length: 326
Transcript: APAF1.aAug05
Intron
Length: 1650
Transcript: APAF1.aAug05
Intron
Length: 1632
Transcript: APAF1.aAug05
Intron
Length: 5103
Transcript: APAF1.aAug05
Reaction
Expected peak: 267
6M
APAF1.F8
APAF1.R8
Exon
Length: 536
Transcript: APAF1.bAug05
Exon
Length: 179
Transcript: APAF1.bAug05
Exon
Length: 157
Transcript: APAF1.bAug05
Exon
Length: 198
Transcript: APAF1.bAug05
Exon
Length: 184
Transcript: APAF1.bAug05
Exon
Length: 113
Transcript: APAF1.bAug05
Exon
Length: 132
Transcript: APAF1.bAug05
Exon
Length: 239
Transcript: APAF1.bAug05
Exon
Length: 168
Transcript: APAF1.bAug05
Exon
Length: 132
Transcript: APAF1.bAug05
Exon
Length: 114
Transcript: APAF1.bAug05
Exon
Length: 185
Transcript: APAF1.bAug05
Exon
Length: 127
Transcript: APAF1.bAug05
Exon
Length: 126
Transcript: APAF1.bAug05
Exon
Length: 132
Transcript: APAF1.bAug05
Exon
Length: 126
Transcript: APAF1.bAug05
Exon
Length: 162
Transcript: APAF1.bAug05
Exon
Length: 129
Transcript: APAF1.bAug05
Exon
Length: 126
Transcript: APAF1.bAug05
Exon
Length: 120
Transcript: APAF1.bAug05
Exon
Length: 117
Transcript: APAF1.bAug05
Exon
Length: 126
Transcript: APAF1.bAug05
Exon
Length: 120
Transcript: APAF1.bAug05
Exon
Length: 126
Transcript: APAF1.bAug05
Exon
Length: 126
Transcript: APAF1.bAug05
Exon
Length: 144
Transcript: APAF1.bAug05
Exon
Length: 3013
Transcript: APAF1.bAug05
Intron
Length: 2483
Transcript: APAF1.bAug05
Intron
Length: 128
Transcript: APAF1.bAug05
Intron
Length: 704
Transcript: APAF1.bAug05
Intron
Length: 9475
Transcript: APAF1.bAug05
Intron
Length: 3112
Transcript: APAF1.bAug05
Intron
Length: 106
Transcript: APAF1.bAug05
Intron
Length: 2746
Transcript: APAF1.bAug05
Intron
Length: 398
Transcript: APAF1.bAug05
Intron
Length: 1155
Transcript: APAF1.bAug05
Intron
Length: 3328
Transcript: APAF1.bAug05
Intron
Length: 448
Transcript: APAF1.bAug05
Intron
Length: 5705
Transcript: APAF1.bAug05
Intron
Length: 2725
Transcript: APAF1.bAug05
Intron
Length: 2740
Transcript: APAF1.bAug05
Intron
Length: 3473
Transcript: APAF1.bAug05
Intron
Length: 12534
Transcript: APAF1.bAug05
Intron
Length: 3801
Transcript: APAF1.bAug05
Intron
Length: 2985
Transcript: APAF1.bAug05
Intron
Length: 1974
Transcript: APAF1.bAug05
Intron
Length: 3614
Transcript: APAF1.bAug05
Intron
Length: 2991
Transcript: APAF1.bAug05
Intron
Length: 7640
Transcript: APAF1.bAug05
Intron
Length: 326
Transcript: APAF1.bAug05
Intron
Length: 1650
Transcript: APAF1.bAug05
Intron
Length: 1632
Transcript: APAF1.bAug05
Intron
Length: 5103
Transcript: APAF1.bAug05
Reaction
Expected peak: 267
6M
APAF1.F8
APAF1.R8
Exon
Length: 536
Transcript: APAF1.cAug05
Exon
Length: 179
Transcript: APAF1.cAug05
Exon
Length: 190
Transcript: APAF1.cAug05
Exon
Length: 198
Transcript: APAF1.cAug05
Exon
Length: 184
Transcript: APAF1.cAug05
Exon
Length: 113
Transcript: APAF1.cAug05
Exon
Length: 132
Transcript: APAF1.cAug05
Exon
Length: 239
Transcript: APAF1.cAug05
Exon
Length: 168
Transcript: APAF1.cAug05
Exon
Length: 132
Transcript: APAF1.cAug05
Exon
Length: 114
Transcript: APAF1.cAug05
Exon
Length: 185
Transcript: APAF1.cAug05
Exon
Length: 127
Transcript: APAF1.cAug05
Exon
Length: 126
Transcript: APAF1.cAug05
Exon
Length: 132
Transcript: APAF1.cAug05
Exon
Length: 126
Transcript: APAF1.cAug05
Exon
Length: 162
Transcript: APAF1.cAug05
Exon
Length: 126
Transcript: APAF1.cAug05
Exon
Length: 120
Transcript: APAF1.cAug05
Exon
Length: 117
Transcript: APAF1.cAug05
Exon
Length: 126
Transcript: APAF1.cAug05
Exon
Length: 120
Transcript: APAF1.cAug05
Exon
Length: 126
Transcript: APAF1.cAug05
Exon
Length: 126
Transcript: APAF1.cAug05
Exon
Length: 144
Transcript: APAF1.cAug05
Exon
Length: 3013
Transcript: APAF1.cAug05
Intron
Length: 2483
Transcript: APAF1.cAug05
Intron
Length: 128
Transcript: APAF1.cAug05
Intron
Length: 671
Transcript: APAF1.cAug05
Intron
Length: 9475
Transcript: APAF1.cAug05
Intron
Length: 3112
Transcript: APAF1.cAug05
Intron
Length: 106
Transcript: APAF1.cAug05
Intron
Length: 2746
Transcript: APAF1.cAug05
Intron
Length: 398
Transcript: APAF1.cAug05
Intron
Length: 1155
Transcript: APAF1.cAug05
Intron
Length: 3328
Transcript: APAF1.cAug05
Intron
Length: 448
Transcript: APAF1.cAug05
Intron
Length: 5705
Transcript: APAF1.cAug05
Intron
Length: 2725
Transcript: APAF1.cAug05
Intron
Length: 2740
Transcript: APAF1.cAug05
Intron
Length: 3473
Transcript: APAF1.cAug05
Intron
Length: 12534
Transcript: APAF1.cAug05
Intron
Length: 6915
Transcript: APAF1.cAug05
Intron
Length: 1974
Transcript: APAF1.cAug05
Intron
Length: 3614
Transcript: APAF1.cAug05
Intron
Length: 2991
Transcript: APAF1.cAug05
Intron
Length: 7640
Transcript: APAF1.cAug05
Intron
Length: 326
Transcript: APAF1.cAug05
Intron
Length: 1650
Transcript: APAF1.cAug05
Intron
Length: 1632
Transcript: APAF1.cAug05
Intron
Length: 5103
Transcript: APAF1.cAug05
Reaction
Expected peak: 138
3.3M
APAF1.F8
APAF1.R8
Exon
Length: 536
Transcript: APAF1.dAug05
Exon
Length: 179
Transcript: APAF1.dAug05
Exon
Length: 157
Transcript: APAF1.dAug05
Exon
Length: 198
Transcript: APAF1.dAug05
Exon
Length: 184
Transcript: APAF1.dAug05
Exon
Length: 113
Transcript: APAF1.dAug05
Exon
Length: 132
Transcript: APAF1.dAug05
Exon
Length: 239
Transcript: APAF1.dAug05
Exon
Length: 168
Transcript: APAF1.dAug05
Exon
Length: 132
Transcript: APAF1.dAug05
Exon
Length: 114
Transcript: APAF1.dAug05
Exon
Length: 185
Transcript: APAF1.dAug05
Exon
Length: 127
Transcript: APAF1.dAug05
Exon
Length: 126
Transcript: APAF1.dAug05
Exon
Length: 132
Transcript: APAF1.dAug05
Exon
Length: 126
Transcript: APAF1.dAug05
Exon
Length: 162
Transcript: APAF1.dAug05
Exon
Length: 126
Transcript: APAF1.dAug05
Exon
Length: 120
Transcript: APAF1.dAug05
Exon
Length: 117
Transcript: APAF1.dAug05
Exon
Length: 126
Transcript: APAF1.dAug05
Exon
Length: 120
Transcript: APAF1.dAug05
Exon
Length: 126
Transcript: APAF1.dAug05
Exon
Length: 126
Transcript: APAF1.dAug05
Exon
Length: 144
Transcript: APAF1.dAug05
Exon
Length: 3013
Transcript: APAF1.dAug05
Intron
Length: 2483
Transcript: APAF1.dAug05
Intron
Length: 128
Transcript: APAF1.dAug05
Intron
Length: 704
Transcript: APAF1.dAug05
Intron
Length: 9475
Transcript: APAF1.dAug05
Intron
Length: 3112
Transcript: APAF1.dAug05
Intron
Length: 106
Transcript: APAF1.dAug05
Intron
Length: 2746
Transcript: APAF1.dAug05
Intron
Length: 398
Transcript: APAF1.dAug05
Intron
Length: 1155
Transcript: APAF1.dAug05
Intron
Length: 3328
Transcript: APAF1.dAug05
Intron
Length: 448
Transcript: APAF1.dAug05
Intron
Length: 5705
Transcript: APAF1.dAug05
Intron
Length: 2725
Transcript: APAF1.dAug05
Intron
Length: 2740
Transcript: APAF1.dAug05
Intron
Length: 3473
Transcript: APAF1.dAug05
Intron
Length: 12534
Transcript: APAF1.dAug05
Intron
Length: 6915
Transcript: APAF1.dAug05
Intron
Length: 1974
Transcript: APAF1.dAug05
Intron
Length: 3614
Transcript: APAF1.dAug05
Intron
Length: 2991
Transcript: APAF1.dAug05
Intron
Length: 7640
Transcript: APAF1.dAug05
Intron
Length: 326
Transcript: APAF1.dAug05
Intron
Length: 1650
Transcript: APAF1.dAug05
Intron
Length: 1632
Transcript: APAF1.dAug05
Intron
Length: 5103
Transcript: APAF1.dAug05
Reaction
Expected peak: 138
3.3M
APAF1.F8
APAF1.R8
Exon
Length: 138
Transcript: APAF1.eAug05
Exon
Length: 190
Transcript: APAF1.eAug05
Exon
Length: 198
Transcript: APAF1.eAug05
Exon
Length: 184
Transcript: APAF1.eAug05
Exon
Length: 113
Transcript: APAF1.eAug05
Exon
Length: 132
Transcript: APAF1.eAug05
Exon
Length: 239
Transcript: APAF1.eAug05
Exon
Length: 168
Transcript: APAF1.eAug05
Exon
Length: 132
Transcript: APAF1.eAug05
Exon
Length: 114
Transcript: APAF1.eAug05
Exon
Length: 185
Transcript: APAF1.eAug05
Exon
Length: 127
Transcript: APAF1.eAug05
Exon
Length: 126
Transcript: APAF1.eAug05
Exon
Length: 132
Transcript: APAF1.eAug05
Exon
Length: 126
Transcript: APAF1.eAug05
Exon
Length: 162
Transcript: APAF1.eAug05
Exon
Length: 126
Transcript: APAF1.eAug05
Exon
Length: 120
Transcript: APAF1.eAug05
Exon
Length: 117
Transcript: APAF1.eAug05
Exon
Length: 126
Transcript: APAF1.eAug05
Exon
Length: 120
Transcript: APAF1.eAug05
Exon
Length: 126
Transcript: APAF1.eAug05
Exon
Length: 144
Transcript: APAF1.eAug05
Exon
Length: 147
Transcript: APAF1.eAug05
Intron
Length: 128
Transcript: APAF1.eAug05
Intron
Length: 671
Transcript: APAF1.eAug05
Intron
Length: 9475
Transcript: APAF1.eAug05
Intron
Length: 3112
Transcript: APAF1.eAug05
Intron
Length: 106
Transcript: APAF1.eAug05
Intron
Length: 2746
Transcript: APAF1.eAug05
Intron
Length: 398
Transcript: APAF1.eAug05
Intron
Length: 1155
Transcript: APAF1.eAug05
Intron
Length: 3328
Transcript: APAF1.eAug05
Intron
Length: 448
Transcript: APAF1.eAug05
Intron
Length: 5705
Transcript: APAF1.eAug05
Intron
Length: 2725
Transcript: APAF1.eAug05
Intron
Length: 2740
Transcript: APAF1.eAug05
Intron
Length: 3473
Transcript: APAF1.eAug05
Intron
Length: 12534
Transcript: APAF1.eAug05
Intron
Length: 6915
Transcript: APAF1.eAug05
Intron
Length: 1974
Transcript: APAF1.eAug05
Intron
Length: 3614
Transcript: APAF1.eAug05
Intron
Length: 2991
Transcript: APAF1.eAug05
Intron
Length: 7640
Transcript: APAF1.eAug05
Intron
Length: 326
Transcript: APAF1.eAug05
Intron
Length: 3408
Transcript: APAF1.eAug05
Intron
Length: 5103
Transcript: APAF1.eAug05
Reaction
Expected peak: 138
3.3M
APAF1.F8
APAF1.R8
Exon
Length: 677
Transcript: APAF1.fAug05
Exon
Length: 179
Transcript: APAF1.fAug05
Exon
Length: 190
Transcript: APAF1.fAug05
Exon
Length: 198
Transcript: APAF1.fAug05
Exon
Length: 184
Transcript: APAF1.fAug05
Exon
Length: 113
Transcript: APAF1.fAug05
Exon
Length: 132
Transcript: APAF1.fAug05
Exon
Length: 3013
Transcript: APAF1.fAug05
Intron
Length: 2483
Transcript: APAF1.fAug05
Intron
Length: 128
Transcript: APAF1.fAug05
Intron
Length: 671
Transcript: APAF1.fAug05
Intron
Length: 9475
Transcript: APAF1.fAug05
Intron
Length: 3112
Transcript: APAF1.fAug05
Intron
Length: 106
Transcript: APAF1.fAug05
Intron
Length: 69613
Transcript: APAF1.fAug05
Exon
Length: 44
Transcript: APAF1.gAug05
Exon
Length: 126
Transcript: APAF1.gAug05
Exon
Length: 126
Transcript: APAF1.gAug05
Exon
Length: 19
Transcript: APAF1.gAug05
Exon
Length: 38
Transcript: APAF1.gAug05
Exon
Length: 499
Transcript: APAF1.gAug05
Intron
Length: 326
Transcript: APAF1.gAug05
Intron
Length: 1650
Transcript: APAF1.gAug05
Intron
Length: 1632
Transcript: APAF1.gAug05
Intron
Length: 87
Transcript: APAF1.gAug05
Intron
Length: 5103
Transcript: APAF1.gAug05
Exon
Length: 226
Transcript: APAF1.hAug05
Exon
Length: 464
Transcript: APAF1.hAug05
Intron
Length: 448
Transcript: APAF1.hAug05
Exon
Length: 100
Transcript: APAF1.iAug05
Exon
Length: 443
Transcript: APAF1.iAug05
Intron
Length: 3614
Transcript: APAF1.iAug05
Exon
Length: 406
Transcript: APAF1.shed1.aAug05
Exon
Length: 639
Transcript: APAF1.shed2.aAug05
Exon
Length: 682
Transcript: APAF1.shed3.aAug05
Exon
Length: 653
Transcript: APAF1.shed4.aAug05
APAF1.R8
CATCACACCATGAACCCAAC
APAF1.F8
GTGAAGTGTTGTTCGTGGTCTG

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