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Home Public data RNomics Platform Client public data HJAY Array validations MDA-MB-231 ectopic expression validations permalink
MDA-MB-231 ectopic expression validations ⚙
Peak ratio bar : All ratio bars for this gene
Gene rna source list : RNA sources
RNA Occurences View
Carstens_MB231_ESRP1 1 View
Carstens_MB231_EV 1 View
Transcript map : AFF4
Exon
Length: 403
Transcript: AFF4.aApr07
Exon
Length: 127
Transcript: AFF4.aApr07
Exon
Length: 795
Transcript: AFF4.aApr07
Exon
Length: 45
Transcript: AFF4.aApr07
Exon
Length: 87
Transcript: AFF4.aApr07
Exon
Length: 37
Transcript: AFF4.aApr07
Exon
Length: 46
Transcript: AFF4.aApr07
Exon
Length: 55
Transcript: AFF4.aApr07
Exon
Length: 38
Transcript: AFF4.aApr07
Exon
Length: 163
Transcript: AFF4.aApr07
Exon
Length: 918
Transcript: AFF4.aApr07
Exon
Length: 89
Transcript: AFF4.aApr07
Exon
Length: 241
Transcript: AFF4.aApr07
Exon
Length: 95
Transcript: AFF4.aApr07
Exon
Length: 64
Transcript: AFF4.aApr07
Exon
Length: 137
Transcript: AFF4.aApr07
Exon
Length: 72
Transcript: AFF4.aApr07
Exon
Length: 94
Transcript: AFF4.aApr07
Exon
Length: 44
Transcript: AFF4.aApr07
Exon
Length: 221
Transcript: AFF4.aApr07
Exon
Length: 5901
Transcript: AFF4.aApr07
Intron
Length: 26065
Transcript: AFF4.aApr07
Intron
Length: 2125
Transcript: AFF4.aApr07
Intron
Length: 1924
Transcript: AFF4.aApr07
Intron
Length: 4970
Transcript: AFF4.aApr07
Intron
Length: 22716
Transcript: AFF4.aApr07
Intron
Length: 1880
Transcript: AFF4.aApr07
Intron
Length: 2800
Transcript: AFF4.aApr07
Intron
Length: 445
Transcript: AFF4.aApr07
Intron
Length: 711
Transcript: AFF4.aApr07
Intron
Length: 989
Transcript: AFF4.aApr07
Intron
Length: 3204
Transcript: AFF4.aApr07
Intron
Length: 625
Transcript: AFF4.aApr07
Intron
Length: 2990
Transcript: AFF4.aApr07
Intron
Length: 918
Transcript: AFF4.aApr07
Intron
Length: 114
Transcript: AFF4.aApr07
Intron
Length: 253
Transcript: AFF4.aApr07
Intron
Length: 1117
Transcript: AFF4.aApr07
Intron
Length: 1190
Transcript: AFF4.aApr07
Intron
Length: 1515
Transcript: AFF4.aApr07
Intron
Length: 2153
Transcript: AFF4.aApr07
Reaction
Expected peak: 280
Associated peak: None
Repeated 2 time
Molarity: 0.00M
Forward: AFF4.U.1.F1
Reverse: AFF4.U.1.R1
Exon
Length: 368
Transcript: AFF4.bApr07
Exon
Length: 127
Transcript: AFF4.bApr07
Exon
Length: 795
Transcript: AFF4.bApr07
Exon
Length: 45
Transcript: AFF4.bApr07
Exon
Length: 87
Transcript: AFF4.bApr07
Exon
Length: 37
Transcript: AFF4.bApr07
Exon
Length: 46
Transcript: AFF4.bApr07
Exon
Length: 55
Transcript: AFF4.bApr07
Exon
Length: 38
Transcript: AFF4.bApr07
Exon
Length: 163
Transcript: AFF4.bApr07
Exon
Length: 918
Transcript: AFF4.bApr07
Exon
Length: 89
Transcript: AFF4.bApr07
Exon
Length: 789
Transcript: AFF4.bApr07
Intron
Length: 26065
Transcript: AFF4.bApr07
Intron
Length: 2125
Transcript: AFF4.bApr07
Intron
Length: 1924
Transcript: AFF4.bApr07
Intron
Length: 4970
Transcript: AFF4.bApr07
Intron
Length: 22716
Transcript: AFF4.bApr07
Intron
Length: 1880
Transcript: AFF4.bApr07
Intron
Length: 2800
Transcript: AFF4.bApr07
Intron
Length: 445
Transcript: AFF4.bApr07
Intron
Length: 711
Transcript: AFF4.bApr07
Intron
Length: 989
Transcript: AFF4.bApr07
Intron
Length: 3204
Transcript: AFF4.bApr07
Intron
Length: 625
Transcript: AFF4.bApr07
Reaction
Expected peak: 280
Associated peak: None
Repeated 2 time
Molarity: 0.00M
Forward: AFF4.U.1.F1
Reverse: AFF4.U.1.R1
Exon
Length: 368
Transcript: AFF4.cApr07
Exon
Length: 92
Transcript: AFF4.cApr07
Exon
Length: 127
Transcript: AFF4.cApr07
Exon
Length: 795
Transcript: AFF4.cApr07
Exon
Length: 45
Transcript: AFF4.cApr07
Exon
Length: 37
Transcript: AFF4.cApr07
Exon
Length: 46
Transcript: AFF4.cApr07
Exon
Length: 55
Transcript: AFF4.cApr07
Exon
Length: 38
Transcript: AFF4.cApr07
Exon
Length: 163
Transcript: AFF4.cApr07
Exon
Length: 300
Transcript: AFF4.cApr07
Intron
Length: 25518
Transcript: AFF4.cApr07
Intron
Length: 455
Transcript: AFF4.cApr07
Intron
Length: 2125
Transcript: AFF4.cApr07
Intron
Length: 1924
Transcript: AFF4.cApr07
Intron
Length: 27773
Transcript: AFF4.cApr07
Intron
Length: 1880
Transcript: AFF4.cApr07
Intron
Length: 2800
Transcript: AFF4.cApr07
Intron
Length: 445
Transcript: AFF4.cApr07
Intron
Length: 711
Transcript: AFF4.cApr07
Intron
Length: 989
Transcript: AFF4.cApr07
Reaction
Expected peak: 372
Associated peak: None
Repeated 2 time
Molarity: 0.00M
Forward: AFF4.U.1.F1
Reverse: AFF4.U.1.R1
Exon
Length: 263
Transcript: AFF4.dApr07
Exon
Length: 127
Transcript: AFF4.dApr07
Exon
Length: 795
Transcript: AFF4.dApr07
Exon
Length: 45
Transcript: AFF4.dApr07
Exon
Length: 87
Transcript: AFF4.dApr07
Exon
Length: 37
Transcript: AFF4.dApr07
Exon
Length: 735
Transcript: AFF4.dApr07
Intron
Length: 26065
Transcript: AFF4.dApr07
Intron
Length: 2125
Transcript: AFF4.dApr07
Intron
Length: 1924
Transcript: AFF4.dApr07
Intron
Length: 4970
Transcript: AFF4.dApr07
Intron
Length: 22716
Transcript: AFF4.dApr07
Intron
Length: 187
Transcript: AFF4.dApr07
Reaction
Expected peak: 280
Associated peak: None
Repeated 2 time
Molarity: 0.00M
Forward: AFF4.U.1.F1
Reverse: AFF4.U.1.R1
Exon
Length: 255
Transcript: AFF4.eApr07
Exon
Length: 127
Transcript: AFF4.eApr07
Exon
Length: 795
Transcript: AFF4.eApr07
Exon
Length: 45
Transcript: AFF4.eApr07
Exon
Length: 507
Transcript: AFF4.eApr07
Intron
Length: 26065
Transcript: AFF4.eApr07
Intron
Length: 2125
Transcript: AFF4.eApr07
Intron
Length: 1924
Transcript: AFF4.eApr07
Intron
Length: 4970
Transcript: AFF4.eApr07
Reaction
Expected peak: 280
Associated peak: None
Repeated 2 time
Molarity: 0.00M
Forward: AFF4.U.1.F1
Reverse: AFF4.U.1.R1
Exon
Length: 16
Transcript: AFF4.fApr07
Exon
Length: 42
Transcript: AFF4.fApr07
Exon
Length: 55
Transcript: AFF4.fApr07
Exon
Length: 38
Transcript: AFF4.fApr07
Exon
Length: 163
Transcript: AFF4.fApr07
Exon
Length: 440
Transcript: AFF4.fApr07
Intron
Length: 1884
Transcript: AFF4.fApr07
Intron
Length: 2800
Transcript: AFF4.fApr07
Intron
Length: 445
Transcript: AFF4.fApr07
Intron
Length: 711
Transcript: AFF4.fApr07
Intron
Length: 989
Transcript: AFF4.fApr07
Exon
Length: 252
Transcript: AFF4.gApr07
Exon
Length: 55
Transcript: AFF4.gApr07
Exon
Length: 38
Transcript: AFF4.gApr07
Exon
Length: 163
Transcript: AFF4.gApr07
Exon
Length: 397
Transcript: AFF4.gApr07
Intron
Length: 1230
Transcript: AFF4.gApr07
Intron
Length: 445
Transcript: AFF4.gApr07
Intron
Length: 711
Transcript: AFF4.gApr07
Intron
Length: 989
Transcript: AFF4.gApr07
Exon
Length: 15
Transcript: AFF4.hApr07
Exon
Length: 87
Transcript: AFF4.hApr07
Exon
Length: 37
Transcript: AFF4.hApr07
Exon
Length: 46
Transcript: AFF4.hApr07
Exon
Length: 55
Transcript: AFF4.hApr07
Exon
Length: 38
Transcript: AFF4.hApr07
Exon
Length: 163
Transcript: AFF4.hApr07
Exon
Length: 206
Transcript: AFF4.hApr07
Intron
Length: 364
Transcript: AFF4.hApr07
Intron
Length: 22716
Transcript: AFF4.hApr07
Intron
Length: 1880
Transcript: AFF4.hApr07
Intron
Length: 2800
Transcript: AFF4.hApr07
Intron
Length: 445
Transcript: AFF4.hApr07
Intron
Length: 711
Transcript: AFF4.hApr07
Intron
Length: 989
Transcript: AFF4.hApr07
Exon
Length: 13
Transcript: AFF4.iApr07
Exon
Length: 87
Transcript: AFF4.iApr07
Exon
Length: 28
Transcript: AFF4.iApr07
Exon
Length: 46
Transcript: AFF4.iApr07
Exon
Length: 55
Transcript: AFF4.iApr07
Exon
Length: 38
Transcript: AFF4.iApr07
Exon
Length: 163
Transcript: AFF4.iApr07
Exon
Length: 147
Transcript: AFF4.iApr07
Intron
Length: 351
Transcript: AFF4.iApr07
Intron
Length: 22725
Transcript: AFF4.iApr07
Intron
Length: 1880
Transcript: AFF4.iApr07
Intron
Length: 2800
Transcript: AFF4.iApr07
Intron
Length: 445
Transcript: AFF4.iApr07
Intron
Length: 711
Transcript: AFF4.iApr07
Intron
Length: 989
Transcript: AFF4.iApr07
Exon
Length: 638
Transcript: AFF4.jApr07-unspliced
Exon
Length: 13
Transcript: AFF4.kApr07
Exon
Length: 87
Transcript: AFF4.kApr07
Exon
Length: 37
Transcript: AFF4.kApr07
Exon
Length: 46
Transcript: AFF4.kApr07
Exon
Length: 55
Transcript: AFF4.kApr07
Exon
Length: 38
Transcript: AFF4.kApr07
Exon
Length: 163
Transcript: AFF4.kApr07
Exon
Length: 100
Transcript: AFF4.kApr07
Intron
Length: 351
Transcript: AFF4.kApr07
Intron
Length: 22716
Transcript: AFF4.kApr07
Intron
Length: 1880
Transcript: AFF4.kApr07
Intron
Length: 2800
Transcript: AFF4.kApr07
Intron
Length: 445
Transcript: AFF4.kApr07
Intron
Length: 711
Transcript: AFF4.kApr07
Intron
Length: 989
Transcript: AFF4.kApr07
Exon
Length: 19
Transcript: AFF4.lApr07
Exon
Length: 87
Transcript: AFF4.lApr07
Exon
Length: 37
Transcript: AFF4.lApr07
Exon
Length: 46
Transcript: AFF4.lApr07
Exon
Length: 55
Transcript: AFF4.lApr07
Exon
Length: 38
Transcript: AFF4.lApr07
Exon
Length: 136
Transcript: AFF4.lApr07
Exon
Length: 83
Transcript: AFF4.lApr07
Intron
Length: 351
Transcript: AFF4.lApr07
Intron
Length: 22716
Transcript: AFF4.lApr07
Intron
Length: 1880
Transcript: AFF4.lApr07
Intron
Length: 2800
Transcript: AFF4.lApr07
Intron
Length: 445
Transcript: AFF4.lApr07
Intron
Length: 738
Transcript: AFF4.lApr07
Intron
Length: 989
Transcript: AFF4.lApr07
Exon
Length: 457
Transcript: AFF4.mApr07
Exon
Length: 37
Transcript: AFF4.mApr07
Exon
Length: 46
Transcript: AFF4.mApr07
Exon
Length: 55
Transcript: AFF4.mApr07
Exon
Length: 38
Transcript: AFF4.mApr07
Exon
Length: 278
Transcript: AFF4.mApr07
Intron
Length: 22716
Transcript: AFF4.mApr07
Intron
Length: 1880
Transcript: AFF4.mApr07
Intron
Length: 2800
Transcript: AFF4.mApr07
Intron
Length: 445
Transcript: AFF4.mApr07
Intron
Length: 711
Transcript: AFF4.mApr07
Exon
Length: 85
Transcript: AFF4.nApr07
Exon
Length: 45
Transcript: AFF4.nApr07
Exon
Length: 87
Transcript: AFF4.nApr07
Exon
Length: 37
Transcript: AFF4.nApr07
Exon
Length: 46
Transcript: AFF4.nApr07
Exon
Length: 55
Transcript: AFF4.nApr07
Exon
Length: 38
Transcript: AFF4.nApr07
Exon
Length: 37
Transcript: AFF4.nApr07
Intron
Length: 1924
Transcript: AFF4.nApr07
Intron
Length: 4970
Transcript: AFF4.nApr07
Intron
Length: 22716
Transcript: AFF4.nApr07
Intron
Length: 1880
Transcript: AFF4.nApr07
Intron
Length: 2800
Transcript: AFF4.nApr07
Intron
Length: 445
Transcript: AFF4.nApr07
Intron
Length: 1863
Transcript: AFF4.nApr07
Exon
Length: 1385
Transcript: AFF4.oApr07-unspliced
Exon
Length: 744
Transcript: AFF4.pApr07-unspliced
Exon
Length: 305
Transcript: AFF4.qApr07-unspliced
Exon
Length: 210
Transcript: AFF4.rApr07-unspliced
Exon
Length: 5048
Transcript: AFF4.sApr07-unspliced
AFF4.U.1.R1
TTCCGCCTTTCCCGTTCTTTCA
AFF4.U.1.F1
CTACGCCTGTTCCGTGTGAGG
Gene primer pair list : Primer pairs
Forward Reverse Occurences View
AFF4.U.1.F1 AFF4.U.1.R1 2 View

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