6. Best 48 RBFOX2 targets / epithelium and mesenchyme (fetal colon)

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Home Supplementary data RBFOX2 enforces the mesenchymal splicing signature in normal and cancer tissues 6. Best 48 RBFOX2 targets / epithelium and mesenchyme (fetal colon)

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https://rnomics.med.usherbrooke.ca/palace?purl=/data/related/683/gene;rna_source/712160;4964

6. Best 48 RBFOX2 targets / epithelium and mesenchyme (fetal colon) ⚙

Transcript map : DCAMKL2 epithelium

FOX.DCAMKL2.F1 / FOX.DCAMKL2.R1 (CM019339 F6) : Curve | Curve set

Exon
Length: 1175
Transcript: DCAMKL2.aApr07

Exon
Length: 335
Transcript: DCAMKL2.aApr07

Exon
Length: 103
Transcript: DCAMKL2.aApr07

Exon
Length: 102
Transcript: DCAMKL2.aApr07

Exon
Length: 95
Transcript: DCAMKL2.aApr07

Exon
Length: 76
Transcript: DCAMKL2.aApr07

Exon
Length: 109
Transcript: DCAMKL2.aApr07

Exon
Length: 58
Transcript: DCAMKL2.aApr07

Exon
Length: 120
Transcript: DCAMKL2.aApr07

Exon
Length: 147
Transcript: DCAMKL2.aApr07

Exon
Length: 134
Transcript: DCAMKL2.aApr07

Exon
Length: 78
Transcript: DCAMKL2.aApr07

Exon
Length: 97
Transcript: DCAMKL2.aApr07

Exon
Length: 81
Transcript: DCAMKL2.aApr07

Exon
Length: 117
Transcript: DCAMKL2.aApr07

Exon
Length: 1435
Transcript: DCAMKL2.aApr07

Intron
Length: 23029
Transcript: DCAMKL2.aApr07

Intron
Length: 90325
Transcript: DCAMKL2.aApr07

Intron
Length: 4761
Transcript: DCAMKL2.aApr07

Intron
Length: 5691
Transcript: DCAMKL2.aApr07

Intron
Length: 16813
Transcript: DCAMKL2.aApr07

Intron
Length: 898
Transcript: DCAMKL2.aApr07

Intron
Length: 2715
Transcript: DCAMKL2.aApr07

Intron
Length: 7778
Transcript: DCAMKL2.aApr07

Intron
Length: 225
Transcript: DCAMKL2.aApr07

Intron
Length: 6913
Transcript: DCAMKL2.aApr07

Intron
Length: 523
Transcript: DCAMKL2.aApr07

Intron
Length: 7126
Transcript: DCAMKL2.aApr07

Intron
Length: 605
Transcript: DCAMKL2.aApr07

Intron
Length: 1182
Transcript: DCAMKL2.aApr07

Intron
Length: 6335
Transcript: DCAMKL2.aApr07

Reaction
Expected peak: 185
14.9M
FOX.DCAMKL2.F1
FOX.DCAMKL2.R1

Exon
Length: 521
Transcript: DCAMKL2.bApr07

Exon
Length: 335
Transcript: DCAMKL2.bApr07

Exon
Length: 103
Transcript: DCAMKL2.bApr07

Exon
Length: 102
Transcript: DCAMKL2.bApr07

Exon
Length: 95
Transcript: DCAMKL2.bApr07

Exon
Length: 73
Transcript: DCAMKL2.bApr07

Exon
Length: 109
Transcript: DCAMKL2.bApr07

Exon
Length: 58
Transcript: DCAMKL2.bApr07

Exon
Length: 120
Transcript: DCAMKL2.bApr07

Exon
Length: 147
Transcript: DCAMKL2.bApr07

Exon
Length: 134
Transcript: DCAMKL2.bApr07

Exon
Length: 78
Transcript: DCAMKL2.bApr07

Exon
Length: 97
Transcript: DCAMKL2.bApr07

Exon
Length: 81
Transcript: DCAMKL2.bApr07

Exon
Length: 117
Transcript: DCAMKL2.bApr07

Exon
Length: 1411
Transcript: DCAMKL2.bApr07

Intron
Length: 23029
Transcript: DCAMKL2.bApr07

Intron
Length: 90325
Transcript: DCAMKL2.bApr07

Intron
Length: 4761
Transcript: DCAMKL2.bApr07

Intron
Length: 5691
Transcript: DCAMKL2.bApr07

Intron
Length: 16816
Transcript: DCAMKL2.bApr07

Intron
Length: 898
Transcript: DCAMKL2.bApr07

Intron
Length: 2715
Transcript: DCAMKL2.bApr07

Intron
Length: 7778
Transcript: DCAMKL2.bApr07

Intron
Length: 225
Transcript: DCAMKL2.bApr07

Intron
Length: 6913
Transcript: DCAMKL2.bApr07

Intron
Length: 523
Transcript: DCAMKL2.bApr07

Intron
Length: 7126
Transcript: DCAMKL2.bApr07

Intron
Length: 605
Transcript: DCAMKL2.bApr07

Intron
Length: 1182
Transcript: DCAMKL2.bApr07

Intron
Length: 6335
Transcript: DCAMKL2.bApr07

Reaction
Expected peak: 185
14.9M
FOX.DCAMKL2.F1
FOX.DCAMKL2.R1

Exon
Length: 222
Transcript: DCAMKL2.cApr07

Exon
Length: 335
Transcript: DCAMKL2.cApr07

Exon
Length: 103
Transcript: DCAMKL2.cApr07

Exon
Length: 102
Transcript: DCAMKL2.cApr07

Exon
Length: 51
Transcript: DCAMKL2.cApr07

Exon
Length: 95
Transcript: DCAMKL2.cApr07

Exon
Length: 76
Transcript: DCAMKL2.cApr07

Exon
Length: 109
Transcript: DCAMKL2.cApr07

Exon
Length: 58
Transcript: DCAMKL2.cApr07

Exon
Length: 120
Transcript: DCAMKL2.cApr07

Exon
Length: 147
Transcript: DCAMKL2.cApr07

Exon
Length: 134
Transcript: DCAMKL2.cApr07

Exon
Length: 78
Transcript: DCAMKL2.cApr07

Exon
Length: 97
Transcript: DCAMKL2.cApr07

Exon
Length: 81
Transcript: DCAMKL2.cApr07

Exon
Length: 117
Transcript: DCAMKL2.cApr07

Exon
Length: 1428
Transcript: DCAMKL2.cApr07

Intron
Length: 23029
Transcript: DCAMKL2.cApr07

Intron
Length: 90325
Transcript: DCAMKL2.cApr07

Intron
Length: 4761
Transcript: DCAMKL2.cApr07

Intron
Length: 924
Transcript: DCAMKL2.cApr07

Intron
Length: 4716
Transcript: DCAMKL2.cApr07

Intron
Length: 16813
Transcript: DCAMKL2.cApr07

Intron
Length: 898
Transcript: DCAMKL2.cApr07

Intron
Length: 2715
Transcript: DCAMKL2.cApr07

Intron
Length: 7778
Transcript: DCAMKL2.cApr07

Intron
Length: 225
Transcript: DCAMKL2.cApr07

Intron
Length: 6913
Transcript: DCAMKL2.cApr07

Intron
Length: 523
Transcript: DCAMKL2.cApr07

Intron
Length: 7126
Transcript: DCAMKL2.cApr07

Intron
Length: 605
Transcript: DCAMKL2.cApr07

Intron
Length: 1182
Transcript: DCAMKL2.cApr07

Intron
Length: 6335
Transcript: DCAMKL2.cApr07

Reaction
Expected peak: 185
14.9M
FOX.DCAMKL2.F1
FOX.DCAMKL2.R1

Exon
Length: 460
Transcript: DCAMKL2.dApr07

Exon
Length: 335
Transcript: DCAMKL2.dApr07

Exon
Length: 103
Transcript: DCAMKL2.dApr07

Exon
Length: 102
Transcript: DCAMKL2.dApr07

Exon
Length: 95
Transcript: DCAMKL2.dApr07

Exon
Length: 73
Transcript: DCAMKL2.dApr07

Exon
Length: 109
Transcript: DCAMKL2.dApr07

Exon
Length: 58
Transcript: DCAMKL2.dApr07

Exon
Length: 120
Transcript: DCAMKL2.dApr07

Exon
Length: 147
Transcript: DCAMKL2.dApr07

Exon
Length: 134
Transcript: DCAMKL2.dApr07

Exon
Length: 78
Transcript: DCAMKL2.dApr07

Exon
Length: 97
Transcript: DCAMKL2.dApr07

Exon
Length: 81
Transcript: DCAMKL2.dApr07

Exon
Length: 117
Transcript: DCAMKL2.dApr07

Exon
Length: 83
Transcript: DCAMKL2.dApr07

Exon
Length: 1412
Transcript: DCAMKL2.dApr07

Intron
Length: 23029
Transcript: DCAMKL2.dApr07

Intron
Length: 90325
Transcript: DCAMKL2.dApr07

Intron
Length: 4761
Transcript: DCAMKL2.dApr07

Intron
Length: 5691
Transcript: DCAMKL2.dApr07

Intron
Length: 16816
Transcript: DCAMKL2.dApr07

Intron
Length: 898
Transcript: DCAMKL2.dApr07

Intron
Length: 2715
Transcript: DCAMKL2.dApr07

Intron
Length: 7778
Transcript: DCAMKL2.dApr07

Intron
Length: 225
Transcript: DCAMKL2.dApr07

Intron
Length: 6913
Transcript: DCAMKL2.dApr07

Intron
Length: 523
Transcript: DCAMKL2.dApr07

Intron
Length: 7126
Transcript: DCAMKL2.dApr07

Intron
Length: 605
Transcript: DCAMKL2.dApr07

Intron
Length: 1182
Transcript: DCAMKL2.dApr07

Intron
Length: 3789
Transcript: DCAMKL2.dApr07

Intron
Length: 2463
Transcript: DCAMKL2.dApr07

Reaction
Expected peak: 268
3.7M
FOX.DCAMKL2.F1
FOX.DCAMKL2.R1

Exon
Length: 194
Transcript: DCAMKL2.eApr07

Exon
Length: 103
Transcript: DCAMKL2.eApr07

Exon
Length: 102
Transcript: DCAMKL2.eApr07

Exon
Length: 66
Transcript: DCAMKL2.eApr07

Exon
Length: 73
Transcript: DCAMKL2.eApr07

Exon
Length: 44
Transcript: DCAMKL2.eApr07

Intron
Length: 17501
Transcript: DCAMKL2.eApr07

Intron
Length: 4761
Transcript: DCAMKL2.eApr07

Intron
Length: 16561
Transcript: DCAMKL2.eApr07

Intron
Length: 5975
Transcript: DCAMKL2.eApr07

Intron
Length: 898
Transcript: DCAMKL2.eApr07

Exon
Length: 136
Transcript: DCAMKL2.fApr07

Exon
Length: 134
Transcript: DCAMKL2.fApr07

Exon
Length: 78
Transcript: DCAMKL2.fApr07

Exon
Length: 97
Transcript: DCAMKL2.fApr07

Exon
Length: 81
Transcript: DCAMKL2.fApr07

Exon
Length: 8
Transcript: DCAMKL2.fApr07

Intron
Length: 3889
Transcript: DCAMKL2.fApr07

Intron
Length: 523
Transcript: DCAMKL2.fApr07

Intron
Length: 7126
Transcript: DCAMKL2.fApr07

Intron
Length: 605
Transcript: DCAMKL2.fApr07

Intron
Length: 1182
Transcript: DCAMKL2.fApr07

Exon
Length: 284
Transcript: DCAMKL2.gApr07-unspliced

FOX.DCAMKL2.R1
GGAGGAACTGGAGAGATGGGCT

FOX.DCAMKL2.F1
CAAGCTGAGGTGACAGGTAAACT