PRPF8 knockdown in human cell lines Tanackovic et al.

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Home Public data LGFUS Public Data PRPF mutations are associated with generalized defects in spliceosome formation and pre-mRNA splicing in patients with retinitis pigmentosa PRPF8 knockdown in human cell lines Tanackovic et al.

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https://rnomics.med.usherbrooke.ca/palace?purl=/data/related/937/gene;rna_source/503529;867

PRPF8 knockdown in human cell lines Tanackovic et al. ⚙

Transcript map : BCL2L1 siPRPF8 global_2|MCF7 (2007-07-13 96hrs)

BCL2L1.u.f.5 / BCL2L1.b.r.24 (CM014229 K22) : Curve | Curve set
BCL2L1.u.f.5 / BCL2L1.b.r.24 (CM014229 K22) : Curve | Curve set
BCL2L1.u.f.5 / BCL2L1.b.r.24 (CM014229 L21) : Curve | Curve set
BCL2L1.u.f.5 / BCL2L1.b.r.24 (CM014229 L21) : Curve | Curve set
BCL2L1.u.f.5 / BCL2L1.b.r.24 (CM014229 L22) : Curve | Curve set
BCL2L1.u.f.5 / BCL2L1.b.r.24 (CM014229 L22) : Curve | Curve set

Exon
Length: 265
Transcript: BCL2L1.aAug05

Exon
Length: 676
Transcript: BCL2L1.aAug05

Exon
Length: 332
Transcript: BCL2L1.aAug05

Intron
Length: 1404
Transcript: BCL2L1.aAug05

Intron
Length: 55568
Transcript: BCL2L1.aAug05

Exon
Length: 89
Transcript: BCL2L1.bAug05

Exon
Length: 676
Transcript: BCL2L1.bAug05

Exon
Length: 332
Transcript: BCL2L1.bAug05

Exon
Length: 73
Transcript: BCL2L1.bAug05

Intron
Length: 1533
Transcript: BCL2L1.bAug05

Intron
Length: 55568
Transcript: BCL2L1.bAug05

Intron
Length: 1222
Transcript: BCL2L1.bAug05

Exon
Length: 482
Transcript: BCL2L1.cAug05

Exon
Length: 676
Transcript: BCL2L1.cAug05

Exon
Length: 1627
Transcript: BCL2L1.cAug05

Intron
Length: 287
Transcript: BCL2L1.cAug05

Intron
Length: 55568
Transcript: BCL2L1.cAug05

Reaction
Expected peak: 169
13.4M
BCL2L1.u.f.5
BCL2L1.b.r.24

Reaction
Expected peak: 169
9.5M
BCL2L1.u.f.5
BCL2L1.b.r.24

Reaction
Expected peak: 169
10.8M
BCL2L1.u.f.5
BCL2L1.b.r.24

Exon
Length: 281
Transcript: BCL2L1.dAug05

Exon
Length: 694
Transcript: BCL2L1.dAug05

Exon
Length: 1638
Transcript: BCL2L1.dAug05

Intron
Length: 269
Transcript: BCL2L1.dAug05

Intron
Length: 55568
Transcript: BCL2L1.dAug05

Reaction
Expected peak: 187
11.2M
BCL2L1.u.f.5
BCL2L1.b.r.24

Reaction
Expected peak: 187
5.7M
BCL2L1.u.f.5
BCL2L1.b.r.24

Reaction
Expected peak: 187
9.3M
BCL2L1.u.f.5
BCL2L1.b.r.24

Exon
Length: 220
Transcript: BCL2L1.eAug05

Exon
Length: 694
Transcript: BCL2L1.eAug05

Exon
Length: 157
Transcript: BCL2L1.eAug05

Exon
Length: 712
Transcript: BCL2L1.eAug05

Intron
Length: 1386
Transcript: BCL2L1.eAug05

Intron
Length: 54507
Transcript: BCL2L1.eAug05

Intron
Length: 904
Transcript: BCL2L1.eAug05

Exon
Length: 88
Transcript: BCL2L1.fAug05

Exon
Length: 694
Transcript: BCL2L1.fAug05

Intron
Length: 1515
Transcript: BCL2L1.fAug05

Exon
Length: 120
Transcript: BCL2L1.gAug05

Exon
Length: 676
Transcript: BCL2L1.gAug05

Intron
Length: 86
Transcript: BCL2L1.gAug05

Reaction
Expected peak: 370
0M
BCL2L1.u.f.5
BCL2L1.b.r.24

Exon
Length: 1026
Transcript: BCL2L1.hAug05

Exon
Length: 505
Transcript: BCL2L1.hAug05

Exon
Length: 1627
Transcript: BCL2L1.hAug05

Intron
Length: 269
Transcript: BCL2L1.hAug05

Intron
Length: 55757
Transcript: BCL2L1.hAug05

Reaction
Expected peak: 187
11.2M
BCL2L1.u.f.5
BCL2L1.b.r.24

Reaction
Expected peak: 187
5.7M
BCL2L1.u.f.5
BCL2L1.b.r.24

Reaction
Expected peak: 187
9.3M
BCL2L1.u.f.5
BCL2L1.b.r.24

Exon
Length: 137
Transcript: BCL2L1.iAug05

Exon
Length: 883
Transcript: BCL2L1.iAug05

Intron
Length: 53596
Transcript: BCL2L1.iAug05

Exon
Length: 105
Transcript: BCL2L1.jAug05

Exon
Length: 276
Transcript: BCL2L1.jAug05

Intron
Length: 95
Transcript: BCL2L1.jAug05

Reaction
Expected peak: 361
0M
BCL2L1.u.f.5
BCL2L1.b.r.24

Exon
Length: 387
Transcript: BCL2L1.shed1.aAug05

Exon
Length: 1205
Transcript: BCL2L1.shed2.aAug05

Reaction
Expected peak: 456
0M
BCL2L1.u.f.5
BCL2L1.b.r.24

BCL2L1.u.f.5
TCCTCTCCCGACCTGTGATA

BCL2L1.b.r.24
CTCAACCAGTCCATTGTCCA