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Sequences

Sequence NM_139120

GAGAGAAGAGGAGGTGGAGAAGGCTTGGGCTCGCGCCGCTGAAGTCGGCTTACCCGCTGGCCGCCTCCTGACAAGCGGGAGGGATCCGCGGTGGACCCAG
GGAAGCGGAGGAGCCTGGCGGCCACCCCCTCTTCCTCACTTCCCTGTACTCTCATCGCTCTCGGCCTCCGACACGAAAAGGAAGCAAATGAGCTGATGGA
AGATCTGTTTGAAACTTTCCAAGATGAGATGGGATTCTCCAACATGGAAGATGATGGCCCAGAAGAGGAGGAGCGTGTGGCTGAGCCTCAAGCTAACTTT
AACACCCCTCAAGCTCTACGGTTTGAGGAACTACTGGCCAACCTACTAAATGAACAACATCAGATAGCGAAGGAACTATTTGAACAGCTGAAGATGAAGA
AACCTTCAGCCAAACAGCAGAAGGAGGTAGAGAAGGTTAAACCCCAGTGTAAGGAAGTTCATCAGACCCTGATTCTGGACCCAGCACAAAGGAAGAGACT
CCAGCAGCAGATGCAGCAGCATGTTCAGCTCTTGACACAAATCCACCTTCTTGCCACCTGCAACCCCAATCTCAATCCGGAGGCCAGTAGCACCAGGATA
TGTCTTAAAGAGCTGGGAACCTTTGCTCAAAGCTCCATCGCCCTTCACCATCAGTACAACCCCAAGTTTCAGACCCTGTTCCAACCCTGTAACTTGATGG
GAGCTATGCAGCTGATTGAAGACTTCAGCACACATGTCAGCATTGACTGCAGCCCTCATAAAACTGTCAAGAAGACTGTTTGTTAGCTTTAGGACTGAAG
CATTTTGAAGGGACTGAGTTTCTTAACCCTCTAATCAGCAAGTACCTTCTAACCTGCAAGACTGCCCGCCAACTGACAGTGAGAATCAAGAACCTCAACA
TGAACAGAGCTCCTGACAACATCATTAAATTTTATAAGAAGACCAAACAGCTGCCAGTCCTAGGAAAATGCTGTGAAGAGATCCAGCCACATCAGTGGAA
GCCACCTATAGAGAGAGAAGAACACCGGCTCCCATTCTGGTTAAAGGCCAGTCTGCCATCCATCCAGGAAGAACTGCGGCACATGGCTGATGGTGCTAGA
GAGGTAGGAAATATGACTGGAACCACTGAGATCAACTCAGATCAAGGCCTAGAAAAAGACAACTCAGAGTTGGGGAGTGAAACTCGGTACCCACTGCTAT
TGCCTAAGGGTGTAGTCCTGAAACTGAAGCCAGTTGCCGACCGTTTCCCCAAGAAGGCTTGGAGACAGAAGCGTTCATCAGTCCTGAAACCCCTCCTTAT
CCAACCCAGCCCCTCTCTCCAGCCCAGCTTCAACCCTGGGAAAACACCAGCCCAATCAACTCATTCAGAAGCCCCTCCGAGCAAAATGGTGCTCCGGATT
CCTCACCCAATACAGCCAGCCACTGTTTTACAGACAGTTCCAGGTGTCCCTCCACTGGGGGTCAGTGGAGGTGAGAGTTTTGAGTCTCCTGCAGCACTGC
CTGCTATGCCCCCTGAGGCCAGGACAAGCTTCCCTCTGTCTGAGTCCCAGACTTTGCTCTCTTCTGCCCCTGTGCCCAAGGTAATGATGCCCTCCCCTGC
CTCTTCCATGTTTCGAAAGCCATATGTGAGACGGAGACCCTCAAAAAGAAGGGGAGCCAGGGCCTTTCGCTGTATCAAACCTGCCCCTGTTATCCACCCT
GCATCTGTTATCTTCACTGTTCCTGCTACCACTGTGAAGATTGTGAGCCTTGGCGGTGGCTGTAACATGATCCAGCCTGTCAATGCGGCTGTGGCCCAGA
GTCCCCAGACTATTCCCATCGCCACCCTCTTGGTTAACCCTACTTCCTTCCCCTGTCCATTGAACCAGCCCCTTGTGGCCTCCTCTGTCTCACCCTTAAT
TGTTTCTGGCAATTCTGTGAATCTTCCTATACCATCCACCCCTGAAGATAAGGCCCACATGAATGTGGACATTGCTTGTGCTGTGGCTGATGGGGAAAAT
GCCTTTCAGGGCCTAGAACCCAAATTAGAGCCCCAGGAACTATCTCCTCTCTCTGCTACTGTTTTCCCCAAAGTGGAACATAGCCCAGGGCCTCCACCAG
TCGATAAACAGTGCCAAGAAGGATTGTCAGAGAACAGTGCCTATCGCTGGACCGTTGTGAAAACAGAGGAGGGAAGGCAAGCTCTGGAGCCGCTCCCTCA
GGGCATCCAGGAGTCTCTAAACAACTCTTCCCCTGGGGATTTAGAGGAAGTTGTCAAGATGGAACCTGAAGATGCTACAGAGGAAATCAGTGGATTTCTT
TGAGCTAGGAGAATAAGAGTCTGGAGACTGGGAGCCTTCACTTCGGCCTCCGATTGGTGGCGCATAGGGTGTAACCAATAGGAAACCCCTAAAGGGTACT
TAAACCCCAGATTTTGCAACTGGGGCTCTTGAGCAGCTTGCTTTAGCCTGCTCCCACTCTGTGGAATATACTTTTGCTTCAATAAATCTGTGCTTTTATT
GCTTCA
  • refseq_YY1AP1.F1 (forward primer)
  • refseq_YY1AP1.R1 (reverse primer)
  • Exon skipping and alternative donor or acceptor

Frame 0

ERRGGGEGLGSRR*SRLTRWPPPDKREGSAVDP
GKRRSLAATPSSSLPCTLIALGLRHEKEANELME
DLFETFQDEMGFSNMEDDGPEEEERVAEPQANF
NTPQALRFEELLANLLNEQHQIAKELFEQLKMK
KPSAKQQKEVEKVKPQCKEVHQTLILDPAQRKRL
QQQMQQHVQLLTQIHLLATCNPNLNPEASSTRI
CLKELGTFAQSSIALHHQYNPKFQTLFQPCNLM
GAMQLIEDFSTHVSIDCSPHKTVKKTVC*L*D*S
ILKGLSFLTL*SASTF*PARLPAN*Q*ESRTST
*TELLTTSLNFIRRPNSCQS*ENAVKRSSHISG
SHL*REKNTGSHSG*RPVCHPSRKNCGTWLMVLE
R*EI*LEPLRSTQIKA*KKTTQSWGVKLGTHCY
CLRV*S*N*SQLPTVSPRRLGDRSVHQS*NPSL
SNPAPLSSPASTLGKHQPNQLIQKPLRAKWCSGF
LTQYSQPLFYRQFQVSLHWGSVEVRVLSLLQHC
LLCPLRPGQASLCLSPRLCSLLPLCPR**CPPL
PLPCFESHM*DGDPQKEGEPGPFAVSNLPLLSTL
HLLSSLFLLPL*RL*ALAVAVT*SSLSMRLWPR
VPRLFPSPPSWLTLLPSPVH*TSPLWPPLSHP*
LFLAIL*IFLYHPPLKIRPT*MWTLLVLWLMGKM
PFRA*NPN*SPRNYLLSLLLFSPKWNIAQGLHQ
SINSAKKDCQRTVPIAGPL*KQRREGKLWSRSL
RASRSL*TTLPLGI*RKLSRWNLKMLQRKSVDFF
ELGE*ESGDWEPSLRPPIGGA*GVTNRKPLKGT
*TPDFATGALEQLALACSHSVEYTFASINLCFY
CF

Frame 1

REEEVEKAWARAAEVGLPAGRLLTSGRDPRWTQ
GSGGAWRPPPLPHFPVLSSLSASDTKRKQMS*W
KICLKLSKMRWDSPTWKMMAQKRRSVWLSLKLTL
TPLKLYGLRNYWPTY*MNNIR*RRNYLNS*R*R
NLQPNSRRR*RRLNPSVRKFIRP*FWTQHKGRD
SSSRCSSMFSS*HKSTFLPPATPISIRRPVAPGY
VLKSWEPLLKAPSPFTISTTPSFRPCSNPVT*W
ELCS*LKTSAHMSALTAALIKLSRRLFVSFRTE
AF*RD*VS*PSNQQVPSNLQDCPPTDSENQEPQH
EQSS*QHH*IL*EDQTAASPRKML*RDPATSVE
ATYRERRTPAPILVKGQSAIHPGRTAAHG*WC*
RGRKYDWNH*DQLRSRPRKRQLRVGE*NSVPTAI
A*GCSPETEASCRPFPQEGLETEAFISPETPPY
PTQPLSPAQLQPWENTSPINSFRSPSEQNGAPD
SSPNTASHCFTDSSRCPSTGGQWR*EF*VSCSTA
CYAP*GQDKLPSV*VPDFALFCPCAQGNDALPC
LFHVSKAICETETLKKKGSQGLSLYQTCPCYPP
CICYLHCSCYHCEDCEPWRWL*HDPACQCGCGPE
SPDYSHRHPLG*PYFLPLSIEPAPCGLLCLTLN
CFWQFCESSYTIHP*R*GPHECGHCLCCG*WGK
CLSGPRTQIRAPGTISSLCYCFPQSGT*PRASTS
R*TVPRRIVREQCLSLDRCENRGGKASSGAAPS
GHPGVSKQLFPWGFRGSCQDGT*RCYRGNQWIS
LS*ENKSLETGSLHFGLRLVAHRV*PIGNP*RVL
KPQILQLGLLSSLL*PAPTLWNILLLQ*ICAFI
AS

Frame 2

EKRRWRRLGLAPLKSAYPLAAS*QAGGIRGGPR
EAEEPGGHPLFLTSLYSHRSRPPTRKGSK*ADG
RSV*NFPR*DGILQHGR*WPRRGGACG*ASS*L
*HPSSSTV*GTTGQPTK*TTSDSEGTI*TAEDEE
TFSQTAEGGREG*TPV*GSSSDPDSGPSTKEET
PAADAAACSALDTNPPSCHLQPQSQSGGQ*HQD
MS*RAGNLCSKLHRPSPSVQPQVSDPVPTL*LDG
SYAAD*RLQHTCQH*LQPS*NCQEDCLLALGLK
HFEGTEFLNPLISKYLLTCKTARQLTVRIKNLN
MNRAPDNIIKFYKKTKQLPVLGKCCEEIQPHQWK
PPIEREEHRLPFWLKASLPSIQEELRHMADGAR
EVGNMTGTTEINSDQGLEKDNSELGSETRYPLL
LPKGVVLKLKPVADRFPKKAWRQKRSSVLKPLLI
QPSPSLQPSFNPGKTPAQSTHSEAPPSKMVLRI
PHPIQPATVLQTVPGVPPLGVSGGESFESPAAL
PAMPPEARTSFPLSESQTLLSSAPVPKVMMPSPA
SSMFRKPYVRRRPSKRRGARAFRCIKPAPVIHP
ASVIFTVPATTVKIVSLGGGCNMIQPVNAAVAQ
SPQTIPIATLLVNPTSFPCPLNQPLVASSVSPLI
VSGNSVNLPIPSTPEDKAHMNVDIACAVADGEN
AFQGLEPKLEPQELSPLSATVFPKVEHSPGPPP
VDKQCQEGLSENSAYRWTVVKTEEGRQALEPLPQ
GIQESLNNSSPGDLEEVVKMEPEDATEEISGFL
*ARRIRVWRLGAFTSASDWWRIGCNQ*ETPKGY
LNPRFCNWGS*AACFSLLPLCGIYFCFNKSVLLL
L

Sequence NM_139118

CCTCGATCCCCTCGCCGCGGTCCCATGGAGGAGGAGGCGAGCCGCAGCGCCGCGGCGACGAACCCAGGGAGTCGGCTTACCCGCTGGCCGCCTCCTGACA
AGCGGGAGGGATCCGCGGTGGACCCAGGGAAGCGGAGGAGCCTGGCGGCCACCCCCTCTTCCTCACTTCCCTGTACTCTCATCGCTCTCGGCCTCCGACA
CGAAAAGGAAGCAAATGAGCTGATGGAAGATCTGTTTGAAACTTTCCAAGATGAGATGGGATTCTCCAACATGGAAGATGATGGCCCAGAAGAGGAGGAG
CGTGTGGCTGAGCCTCAAGCTAACTTTAACACCCCTCAAGCTCTACGGTTTGAGGAACTACTGGCCAACCTACTAAATGAACAACATCAGATAGCGAAGG
AACTATTTGAACAGCTGAAGATGAAGAAACCTTCAGCCAAACAGCAGAAGGAGGTAGAGAAGGTTAAACCCCAGTGTAAGGAAGTTCATCAGACCCTGAT
TCTGGACCCAGCACAAAGGAAGAGACTCCAGCAGCAGATGCAGCAGCATGTTCAGCTCTTGACACAAATCCACCTTCTTGCCACCTGCAACCCCAATCTC
AATCCGGAGGCCAGTAGCACCAGGATATGTCTTAAAGAGCTGGGAACCTTTGCTCAAAGCTCCATCGCCCTTCACCATCAGTACAACCCCAAGTTTCAGA
CCCTGTTCCAACCCTGTAACTTGATGGGAGCTATGCAGCTGATTGAAGACTTCAGCACACATGTCAGCATTGACTGCAGCCCTCATAAAACTGTCAAGAA
GACTGCCAATGAATTTCCCTGTTTGCCAAAGCAAGTGGCTTGGATCCTGGCCACAAGCAAGGTTTTCATGTATCCAGAGTTACTTCCAGTGTGTTCCCTG
AAGGCAAAGAATCCCCAGGATAAGATCCTCTTCACCAAGGCTGAGGACAACAAGTACCTTCTAACCTGCAAGACTGCCCGCCAACTGACAGTGAGAATCA
AGAACCTCAACATGAACAGAGCTCCTGACAACATCATTAAATTTTATAAGAAGACCAAACAGCTGCCAGTCCTAGGAAAATGCTGTGAAGAGATCCAGCC
ACATCAGTGGAAGCCACCTATAGAGAGAGAAGAACACCGGCTCCCATTCTGGTTAAAGGCCAGTCTGCCATCCATCCAGGAAGAACTGCGGCACATGGCT
GATGGTGCTAGAGAGGTAGGAAATATGACTGGAACCACTGAGATCAACTCAGATCAAGGCCTAGAAAAAGACAACTCAGAGTTGGGGAGTGAAACTCGGT
ACCCACTGCTATTGCCTAAGGGTGTAGTCCTGAAACTGAAGCCAGTTGCCGACCGTTTCCCCAAGAAGGCTTGGAGACAGAAGCGTTCATCAGTCCTGAA
ACCCCTCCTTATCCAACCCAGCCCCTCTCTCCAGCCCAGCTTCAACCCTGGGAAAACACCAGCCCAATCAACTCATTCAGAAGCCCCTCCGAGCAAAATG
GTGCTCCGGATTCCTCACCCAATACAGCCAGCCACTGTTTTACAGACAGTTCCAGGTGTCCCTCCACTGGGGGTCAGTGGAGGTGAGAGTTTTGAGTCTC
CTGCAGCACTGCCTGCTATGCCCCCTGAGGCCAGGACAAGCTTCCCTCTGTCTGAGTCCCAGACTTTGCTCTCTTCTGCCCCTGTGCCCAAGGTAATGAT
GCCCTCCCCTGCCTCTTCCATGTTTCGAAAGCCATATGTGAGACGGAGACCCTCAAAAAGAAGGGGAGCCAGGGCCTTTCGCTGTATCAAACCTGCCCCT
GTTATCCACCCTGCATCTGTTATCTTCACTGTTCCTGCTACCACTGTGAAGATTGTGAGCCTTGGCGGTGGCTGTAACATGATCCAGCCTGTCAATGCGG
CTGTGGCCCAGAGTCCCCAGACTATTCCCATCGCCACCCTCTTGGTTAACCCTACTTCCTTCCCCTGTCCATTGAACCAGCCCCTTGTGGCCTCCTCTGT
CTCACCCTTAATTGTTTCTGGCAATTCTGTGAATCTTCCTATACCATCCACCCCTGAAGATAAGGCCCACATGAATGTGGACATTGCTTGTGCTGTGGCT
GATGGGGAAAATGCCTTTCAGGGCCTAGAACCCAAATTAGAGCCCCAGGAACTATCTCCTCTCTCTGCTACTGTTTTCCCCAAAGTGGAACATAGCCCAG
GGCCTCCACCAGTCGATAAACAGTGCCAAGAAGGATTGTCAGAGAACAGTGCCTATCGCTGGACCGTTGTGAAAACAGAGGAGGGAAGGCAAGCTCTGGA
GCCGCTCCCTCAGGGCATCCAGGAGTCTCTAAACAACTCTTCCCCTGGGGATTTAGAGGAAGTTGTCAAGATGGAACCTGAAGATGCTACAGAGGAAATC
AGTGGATTTCTTTGAGCTAGGAGAATAAGAGTCTGGAGACTGGGAGCCTTCACTTCGGCCTCCGATTGGTGGCGCATAGGGTGTAACCAATAGGAAACCC
CTAAAGGGTACTTAAACCCCAGATTTTGCAACTGGGGCTCTTGAGCAGCTTGCTTTAGCCTGCTCCCACTCTGTGGAATATACTTTTGCTTCAATAAATC
TGTGCTTTTATTGCTTCA
  • refseq_YY1AP1.F1 (forward primer)
  • refseq_YY1AP1.R1 (reverse primer)
  • Exon skipping and alternative donor or acceptor

Frame 0

PRSPRRGPMEEEASRSAAATNPGSRLTRWPPPD
KREGSAVDPGKRRSLAATPSSSLPCTLIALGLRH
EKEANELMEDLFETFQDEMGFSNMEDDGPEEEE
RVAEPQANFNTPQALRFEELLANLLNEQHQIAK
ELFEQLKMKKPSAKQQKEVEKVKPQCKEVHQTLI
LDPAQRKRLQQQMQQHVQLLTQIHLLATCNPNL
NPEASSTRICLKELGTFAQSSIALHHQYNPKFQ
TLFQPCNLMGAMQLIEDFSTHVSIDCSPHKTVKK
TANEFPCLPKQVAWILATSKVFMYPELLPVCSL
KAKNPQDKILFTKAEDNKYLLTCKTARQLTVRI
KNLNMNRAPDNIIKFYKKTKQLPVLGKCCEEIQP
HQWKPPIEREEHRLPFWLKASLPSIQEELRHMA
DGAREVGNMTGTTEINSDQGLEKDNSELGSETR
YPLLLPKGVVLKLKPVADRFPKKAWRQKRSSVLK
PLLIQPSPSLQPSFNPGKTPAQSTHSEAPPSKM
VLRIPHPIQPATVLQTVPGVPPLGVSGGESFES
PAALPAMPPEARTSFPLSESQTLLSSAPVPKVMM
PSPASSMFRKPYVRRRPSKRRGARAFRCIKPAP
VIHPASVIFTVPATTVKIVSLGGGCNMIQPVNA
AVAQSPQTIPIATLLVNPTSFPCPLNQPLVASSV
SPLIVSGNSVNLPIPSTPEDKAHMNVDIACAVA
DGENAFQGLEPKLEPQELSPLSATVFPKVEHSP
GPPPVDKQCQEGLSENSAYRWTVVKTEEGRQALE
PLPQGIQESLNNSSPGDLEEVVKMEPEDATEEI
SGFL*ARRIRVWRLGAFTSASDWWRIGCNQ*ET
PKGYLNPRFCNWGS*AACFSLLPLCGIYFCFNKS
VLLLL

Frame 1

LDPLAAVPWRRRRAAAPRRRTQGVGLPAGRLLT
SGRDPRWTQGSGGAWRPPPLPHFPVLSSLSASD
TKRKQMS*WKICLKLSKMRWDSPTWKMMAQKRRS
VWLSLKLTLTPLKLYGLRNYWPTY*MNNIR*RR
NYLNS*R*RNLQPNSRRR*RRLNPSVRKFIRP*
FWTQHKGRDSSSRCSSMFSS*HKSTFLPPATPIS
IRRPVAPGYVLKSWEPLLKAPSPFTISTTPSFR
PCSNPVT*WELCS*LKTSAHMSALTAALIKLSR
RLPMNFPVCQSKWLGSWPQARFSCIQSYFQCVP*
RQRIPRIRSSSPRLRTTSTF*PARLPAN*Q*ES
RTST*TELLTTSLNFIRRPNSCQS*ENAVKRSS
HISGSHL*REKNTGSHSG*RPVCHPSRKNCGTWL
MVLER*EI*LEPLRSTQIKA*KKTTQSWGVKLG
THCYCLRV*S*N*SQLPTVSPRRLGDRSVHQS*
NPSLSNPAPLSSPASTLGKHQPNQLIQKPLRAKW
CSGFLTQYSQPLFYRQFQVSLHWGSVEVRVLSL
LQHCLLCPLRPGQASLCLSPRLCSLLPLCPR**
CPPLPLPCFESHM*DGDPQKEGEPGPFAVSNLPL
LSTLHLLSSLFLLPL*RL*ALAVAVT*SSLSMR
LWPRVPRLFPSPPSWLTLLPSPVH*TSPLWPPL
SHP*LFLAIL*IFLYHPPLKIRPT*MWTLLVLWL
MGKMPFRA*NPN*SPRNYLLSLLLFSPKWNIAQ
GLHQSINSAKKDCQRTVPIAGPL*KQRREGKLW
SRSLRASRSL*TTLPLGI*RKLSRWNLKMLQRKS
VDFFELGE*ESGDWEPSLRPPIGGA*GVTNRKP
LKGT*TPDFATGALEQLALACSHSVEYTFASIN
LCFYCF

Frame 2

SIPSPRSHGGGGEPQRRGDEPRESAYPLAAS*Q
AGGIRGGPREAEEPGGHPLFLTSLYSHRSRPPT
RKGSK*ADGRSV*NFPR*DGILQHGR*WPRRGG
ACG*ASS*L*HPSSSTV*GTTGQPTK*TTSDSEG
TI*TAEDEETFSQTAEGGREG*TPV*GSSSDPD
SGPSTKEETPAADAAACSALDTNPPSCHLQPQS
QSGGQ*HQDMS*RAGNLCSKLHRPSPSVQPQVSD
PVPTL*LDGSYAAD*RLQHTCQH*LQPS*NCQE
DCQ*ISLFAKASGLDPGHKQGFHVSRVTSSVFP
EGKESPG*DPLHQG*GQQVPSNLQDCPPTDSENQ
EPQHEQSS*QHH*IL*EDQTAASPRKML*RDPA
TSVEATYRERRTPAPILVKGQSAIHPGRTAAHG
*WC*RGRKYDWNH*DQLRSRPRKRQLRVGE*NSV
PTAIA*GCSPETEASCRPFPQEGLETEAFISPE
TPPYPTQPLSPAQLQPWENTSPINSFRSPSEQN
GAPDSSPNTASHCFTDSSRCPSTGGQWR*EF*VS
CSTACYAP*GQDKLPSV*VPDFALFCPCAQGND
ALPCLFHVSKAICETETLKKKGSQGLSLYQTCP
CYPPCICYLHCSCYHCEDCEPWRWL*HDPACQCG
CGPESPDYSHRHPLG*PYFLPLSIEPAPCGLLC
LTLNCFWQFCESSYTIHP*R*GPHECGHCLCCG
*WGKCLSGPRTQIRAPGTISSLCYCFPQSGT*PR
ASTSR*TVPRRIVREQCLSLDRCENRGGKASSG
AAPSGHPGVSKQLFPWGFRGSCQDGT*RCYRGN
QWISLS*ENKSLETGSLHFGLRLVAHRV*PIGNP
*RVLKPQILQLGLLSSLL*PAPTLWNILLLQ*I
CAFIAS

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