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Sequences

Sequence NM_001009877

GGAAGAGAAGAAGCGGAAGCGAGAGAGGGAGCACTGTGACACGGAGGGAGAGGCTGACGACTTTGATCCTGGGAAGAAGGTGGAGGTGGAGCCGCCCCCA
GATCGGCCAGTCCGAGCGTGCCGGACACAGCCAGTTCTCGGTGGAACTTAAAATGCTGTGAGACACCAGACAGACAGATACTGTGAACTTGGAGCTCTCT
AATGAAGGGATACCAAAGTCTTGTATTCAATTTTTTTTTCCTTAAATTGTCAGCCGAAAATGAGAGCACACCTATTCAGCAACTCCTGGAACACTTCCTC
CGCCAGCTTCAGAGAAAAGATCCCCATGGATTTTTTGCTTTTCCTGTCACGGATGCAATTGCTCCTGGATATTCAATGATAATAAAACATCCCATGGATT
TTGGCACCATGAAAGACAAAATTGTAGCTAATGAATACAAGTCAGTTACGGAATTTAAGGCAGATTTCAAGCTGATGTGTGATAATGCAATGACATACAA
TAGGCCAGATACCGTGTACTACAAGTTGGCGAAGAAGATCCTTCACGCAGGCTTTAAGATGATGAGCAAACAGGCAGCTCTTTTGGGCAATGAAGATACA
GCTGTTGAGGAACCTGTCCCTGAAGTTGTACCAGTACAAGTAGAAACTGCCAAGAAATCCAAAAAGCCGAGTAGAGAAGTTATCAGCTGCATGTTTGAGC
CTGAAGGGAATGCCTGCAGCTTGACGGACAGTACCGCAGAGGAGCACGTGCTGGCGCTGGTGGAGCACGCAGCTGACGAAGCTCGGGACAGGATCAACCG
GTTCCTCCCAGGCGGCAAGATGGGCTATCTGAAGAGGAACGGGGACGGGAGCCTGCTCTACAGCGTGGTCAACACGGCCGAGCCGGACGCTGATGAGGAG
GAGACCCACCCGGTGGACTTGAGCTCGCTCTCCAGTAAGCTACTCCCAGGCTTCACCACGCTGGGCTTCAAAGACGAGAGAAGAAACAAAGTCACCTTTC
TCTCCAGTGCCACTACTGCGCTTTCGATGCAGAATAATTCAGTATTTGGCGACTTGAAGTCGGACGAGATGGAGCTGCTCTACTCAGCCTACGGAGATGA
GACAGGCGTGCAGTGTGCGCTGAGCCTGCAGGAGTTTGTGAAGGATGCTGGGAGCTACAGCAAGAAAGTGGTGGACGACCTCCTGGACCAGATCACAGGC
GGAGACCACTCTAGGACGCTCTTCCAGCTGAAGCAGAGAAGAAATGTTCCCATGAAGCCTCCAGATGAAGCCAAGGTTGGGGACACCCTAGGAGACAGCA
GCAGCTCTGTTCTGGAGTTCATGTCGATGAAGTCCTATCCCGACGTTTCTGTGGATATCTCCATGCTCAGCTCTCTGGGGAAGGTGAAGAAGGAGCTGGA
CCCTGACGACAGCCATTTGAACTTGGATGAGACGACGAAGCTCCTGCAGGACCTGCACGAAGCACAGGCGGAGCGCGGCGGCTCTCGGCCGTCGTCCAAC
CTCAGCTCCCTGTCCAACGCCTCCGAGAGGGACCAGCACCACCTGGGAAGCCCTTCTCGCCTGAGTGTCGGGGAGCAGCCAGACGTCACCCACGACCCCT
ATGAGTTTCTTCAGTCTCCAGAGCCTGCGGCCTCTGCCAAGACCTAACTCTAGACCACCTTCAGCTCTTTTATTTTATTTTTTTAGTTTTATTTTGCACG
TGTAGAGTTTTTGTCATCAGACAAGGACTTTGATCCTGTCCCCTTTGGCATGCGGGAAGCAGCCGCGGGGAGGTAATGAATTGTCTGTGGTATCATGTCA
GCAGAGTCTCCAAGCCCCACGAACCCTGAGGAGTGGAGTCATACGCGAAGGCCATATGGCCATCGTGTCAGCAGAGAGAGTCTCTGTACACAGCCCCGTG
AACCCTGAGGAGTGGAGTCATACACGAAGGGCGTGTGGCCATCGTGTCAGCAGAGAGAGTCTCTGTACACAGCCCCGTGAACCCTGAGGAGTGGAGTCAT
ACGCGAAGGGTGTGTGGCCAGGCTGCAGAGCTGCGTGCCGTTTGTGTCCGAGCATCACGTGTGGCTCCAGCCCTTGTTTCTGCCAGTGTAGACACCTCTG
TCTGCCCCACTGTCCTGGGGTCGCTCTTGGGAGGCACAGGCATGGGTGTGTCTGGCCTCATTCTGTATCAGTCCAGTGTGTTCCTGTCATAGTTTGTGTC
TCCCAGGCAGGCCATGGTAGGGGCCTCGCAGGGGCCATTGGGGAGCACAGGGCCAGGCTGGGGTGAGGAGAGCTCCCCTGTTTTCTGTTTAATTGATGAG
CCTGGGAAAGGAGTGTGTTCTGCCTGCCCGTTACAGTGGAGCGTTCCGTGTCCATAAAACGTTTTCTAACTGGG
  • refseq_BRD9.F1 (forward primer)
  • refseq_BRD9.R1 (reverse primer)
  • Alternative acceptor

Frame 0

GREEAEAREGAL*HGGRG*RL*SWEEGGGGAAP
RSASPSVPDTASSRWNLKCCETPDRQIL*TWSSL
MKGYQSLVFNFFFLKLSAENESTPIQQLLEHFL
RQLQRKDPHGFFAFPVTDAIAPGYSMIIKHPMD
FGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYN
RPDTVYYKLAKKILHAGFKMMSKQAALLGNEDT
AVEEPVPEVVPVQVETAKKSKKPSREVISCMFE
PEGNACSLTDSTAEEHVLALVEHAADEARDRINR
FLPGGKMGYLKRNGDGSLLYSVVNTAEPDADEE
ETHPVDLSSLSSKLLPGFTTLGFKDERRNKVTF
LSSATTALSMQNNSVFGDLKSDEMELLYSAYGDE
TGVQCALSLQEFVKDAGSYSKKVVDDLLDQITG
GDHSRTLFQLKQRRNVPMKPPDEAKVGDTLGDS
SSSVLEFMSMKSYPDVSVDISMLSSLGKVKKELD
PDDSHLNLDETTKLLQDLHEAQAERGGSRPSSN
LSSLSNASERDQHHLGSPSRLSVGEQPDVTHDP
YEFLQSPEPAASAKT*L*TTFSSFILFF*FYFAR
VEFLSSDKDFDPVPFGMREAAAGR**IVCGIMS
AESPSPTNPEEWSHTRRPYGHRVSRESLCTQPR
EP*GVESYTKGVWPSCQQRESLYTAP*TLRSGVI
REGCVARLQSCVPFVSEHHVWLQPLFLPV*TPL
SAPLSWGRSWEAQAWVCLASFCISPVCSCHSLC
LPGRPW*GPRRGHWGAQGQAGVRRAPLFSV*LMS
LGKECVLPARYSGAFRVHKTFSNW

Frame 1

EEKKRKREREHCDTEGEADDFDPGKKVEVEPPP
DRPVRACRTQPVLGGT*NAVRHQTDRYCELGAL
**RDTKVLYSIFFSLNCQPKMRAHLFSNSWNTSS
ASFREKIPMDFLLFLSRMQLLLDIQ***NIPWI
LAP*KTKL*LMNTSQLRNLRQISS*CVIMQ*HT
IGQIPCTTSWRRRSFTQALR**ANRQLFWAMKIQ
LLRNLSLKLYQYK*KLPRNPKSRVEKLSAACLS
LKGMPAA*RTVPQRSTCWRWWSTQLTKLGTGST
GSSQAARWAI*RGTGTGACSTAWSTRPSRTLMRR
RPTRWT*ARSPVSYSQASPRWASKTREETKSPF
SPVPLLRFRCRIIQYLAT*SRTRWSCSTQPTEM
RQACSVR*ACRSL*RMLGATARKWWTTSWTRSQA
ETTLGRSSS*SREEMFP*SLQMKPRLGTP*ETA
AALFWSSCR*SPIPTFLWISPCSALWGR*RRSW
TLTTAI*TWMRRRSSCRTCTKHRRSAAALGRRPT
SAPCPTPPRGTSTTWEALLA*VSGSSQTSPTTP
MSFFSLQSLRPLPRPNSRPPSALLFYFFSFILH
V*SFCHQTRTLILSPLACGKQPRGGNELSVVSCQ
QSLQAPRTLRSGVIREGHMAIVSAERVSVHSPV
NPEEWSHTRRACGHRVSRESLCTQPREP*GVES
YAKGVWPGCRAACRLCPSITCGSSPCFCQCRHLC
LPHCPGVALGRHRHGCVWPHSVSVQCVPVIVCV
SQAGHGRGLAGAIGEHRARLG*GELPCFLFN**
AWERSVFCLPVTVERSVSIKRFLTG

Frame 2

KRRSGSERGSTVTRRERLTTLILGRRWRWSRPQ
IGQSERAGHSQFSVELKML*DTRQTDTVNLELS
NEGIPKSCIQFFFP*IVSRK*EHTYSATPGTLP
PPASEKRSPWIFCFSCHGCNCSWIFNDNKTSHGF
WHHERQNCS**IQVSYGI*GRFQADV**CNDIQ
*ARYRVLQVGEEDPSRRL*DDEQTGSSFGQ*RY
SC*GTCP*SCTSTSRNCQEIQKAE*RSYQLHV*A
*RECLQLDGQYRRGARAGAGGARS*RSSGQDQP
VPPRRQDGLSEEERGREPALQRGQHGRAGR**G
GDPPGGLELALQ*ATPRLHHAGLQRREKKQSHLS
LQCHYCAFDAE*FSIWRLEVGRDGAALLSLRR*
DRRAVCAEPAGVCEGCWELQQESGGRPPGPDHR
RRPL*DALPAEAEKKCSHEASR*SQGWGHPRRQQ
QLCSGVHVDEVLSRRFCGYLHAQLSGEGEEGAG
P*RQPFELG*DDEAPAGPARSTGGARRLSAVVQ
PQLPVQRLREGPAPPGKPFSPECRGAARRHPRPL
*VSSVSRACGLCQDLTLDHLQLFYFIFLVLFCT
CRVFVIRQGL*SCPLWHAGSSRGEVMNCLWYHV
SRVSKPHEP*GVESYAKAIWPSCQQRESLYTAP*
TLRSGVIHEGRVAIVSAERVSVHSPVNPEEWSH
TRRVCGQAAELRAVCVRASRVAPALVSASVDTS
VCPTVLGSLLGGTGMGVSGLILYQSSVFLS*FVS
PRQAMVGASQGPLGSTGPGWGEESSPVFCLIDE
PGKGVCSACPLQWSVPCP*NVF*L

Sequence NM_023924

TTTCCGGCGCGGCCCAGCGAGCTCGGCAACCTCGGCGCAGCGAGCGCGGGCGGCCAGCCAGGGCCAGGGGGCGGTGGCGGCCAAGGTCCGACCGGGTGCC
AGCTGTTCCCAGCCCCCGCCTCGGGCCCGCCGCCGGCGCCGCCATGGGCAAGAAGCACAAGAAGCACAAGGCCGAGTGGCGCTCGTCCTACGAGGATTAT
GCCGACAAGCCCCTGGAGAAGCCTCTAAAGCTAGTCCTGAAGGTCGGAGGAAGTGAAGTGACTGAACTCTCAGGATCCGGCCACGACTCCAGTTACTATG
ATGACAGGTCAGACCATGAGCGAGAGAGGCACAAAGAAAAGAAAAAGAAGAAGAAGAAGAAGTCCGAGAAGGAGAAGCATCTGGACGATGAGGAAAGAAG
GAAGCGAAAGGAAGAGAAGAAGCGGAAGCGAGAGAGGGAGCACTGTGACACGGAGGGAGAGGCTGACGACTTTGATCCTGGGAAGAAGGTGGAGGTGGAG
CCGCCCCCAGATCGGCCAGTCCGAGCGTGCCGGACACAGCCAGTTCTCGGTGGAACTTAAAATGCTGTGAGACACCAGACAGACAGATACTGTGAACTTG
GAGCTCTCTAATGAAGGGATACCAAAGTCTTGTATTCAATTTTTTTTTCCTTAAATTGTCAGCCGAAAATGAGAGCACACCTATTCAGCAACTCCTGGAA
CACTTCCTCCGCCAGCTTCAGAGAAAAGATCCCCATGGATTTTTTGCTTTTCCTGTCACGGATGCAATTGCTCCTGGATATTCAATGATAATAAAACATC
CCATGGATTTTGGCACCATGAAAGACAAAATTGTAGCTAATGAATACAAGTCAGTTACGGAATTTAAGGCAGATTTCAAGCTGATGTGTGATAATGCAAT
GACATACAATAGGCCAGATACCGTGTACTACAAGTTGGCGAAGAAGATCCTTCACGCAGGCTTTAAGATGATGAGCAAAGAGCGGCTGTTAGCTTTGAAG
CGCAGCATGTCGTTTATGCAGGACATGGATTTTTCTCAGCAGGCAGCTCTTTTGGGCAATGAAGATACAGCTGTTGAGGAACCTGTCCCTGAAGTTGTAC
CAGTACAAGTAGAAACTGCCAAGAAATCCAAAAAGCCGAGTAGAGAAGTTATCAGCTGCATGTTTGAGCCTGAAGGGAATGCCTGCAGCTTGACGGACAG
TACCGCAGAGGAGCACGTGCTGGCGCTGGTGGAGCACGCAGCTGACGAAGCTCGGGACAGGATCAACCGGTTCCTCCCAGGCGGCAAGATGGGCTATCTG
AAGAGGAACGGGGACGGGAGCCTGCTCTACAGCGTGGTCAACACGGCCGAGCCGGACGCTGATGAGGAGGAGACCCACCCGGTGGACTTGAGCTCGCTCT
CCAGTAAGCTACTCCCAGGCTTCACCACGCTGGGCTTCAAAGACGAGAGAAGAAACAAAGTCACCTTTCTCTCCAGTGCCACTACTGCGCTTTCGATGCA
GAATAATTCAGTATTTGGCGACTTGAAGTCGGACGAGATGGAGCTGCTCTACTCAGCCTACGGAGATGAGACAGGCGTGCAGTGTGCGCTGAGCCTGCAG
GAGTTTGTGAAGGATGCTGGGAGCTACAGCAAGAAAGTGGTGGACGACCTCCTGGACCAGATCACAGGCGGAGACCACTCTAGGACGCTCTTCCAGCTGA
AGCAGAGAAGAAATGTTCCCATGAAGCCTCCAGATGAAGCCAAGGTTGGGGACACCCTAGGAGACAGCAGCAGCTCTGTTCTGGAGTTCATGTCGATGAA
GTCCTATCCCGACGTTTCTGTGGATATCTCCATGCTCAGCTCTCTGGGGAAGGTGAAGAAGGAGCTGGACCCTGACGACAGCCATTTGAACTTGGATGAG
ACGACGAAGCTCCTGCAGGACCTGCACGAAGCACAGGCGGAGCGCGGCGGCTCTCGGCCGTCGTCCAACCTCAGCTCCCTGTCCAACGCCTCCGAGAGGG
ACCAGCACCACCTGGGAAGCCCTTCTCGCCTGAGTGTCGGGGAGCAGCCAGACGTCACCCACGACCCCTATGAGTTTCTTCAGTCTCCAGAGCCTGCGGC
CTCTGCCAAGACCTAACTCTAGACCACCTTCAGCTCTTTTATTTTATTTTTTTAGTTTTATTTTGCACGTGTAGAGTTTTTGTCATCAGACAAGGACTTT
GATCCTGTCCCCTTTGGCATGCGGGAAGCAGCCGCGGGGAGGTAATGAATTGTCTGTGGTATCATGTCAGCAGAGTCTCCAAGCCCCACGAACCCTGAGG
AGTGGAGTCATACGCGAAGGCCATATGGCCATCGTGTCAGCAGAGAGAGTCTCTGTACACAGCCCCGTGAACCCTGAGGAGTGGAGTCATACACGAAGGG
CGTGTGGCCATCGTGTCAGCAGAGAGAGTCTCTGTACACAGCCCCGTGAACCCTGAGGAGTGGAGTCATACGCGAAGGGTGTGTGGCCAGGCTGCAGAGC
TGCGTGCCGTTTGTGTCCGAGCATCACGTGTGGCTCCAGCCCTTGTTTCTGCCAGTGTAGACACCTCTGTCTGCCCCACTGTCCTGGGGTCGCTCTTGGG
AGGCACAGGCATGGGTGTGTCTGGCCTCATTCTGTATCAGTCCAGTGTGTTCCTGTCATAGTTTGTGTCTCCCAGGCAGGCCATGGTAGGGGCCTCGCAG
GGGCCATTGGGGAGCACAGGGCCAGGCTGGGGTGAGGAGAGCTCCCCTGTTTTCTGTTTAATTGATGAGCCTGGGAAAGGAGTGTGTTCTGCCTGCCCGT
TACAGTGGAGCGTTCCGTGTCCATAAAACGTTTTCTAACTGGG
  • refseq_BRD9.F1 (forward primer)
  • refseq_BRD9.R1 (reverse primer)
  • Alternative acceptor

Frame 0

FPARPSELGNLGAASAGGQPGPGGGGGQGPTGC
QLFPAPASGPPPAPPWARSTRSTRPSGARPTRIM
PTSPWRSL*S*S*RSEEVK*LNSQDPATTPVTM
MTGQTMSERGTKKRKRRRRRSPRRRSIWTMRKE
GSERKRRSGSERGSTVTRRERLTTLILGRRWRWS
RPQIGQSERAGHSQFSVELKML*DTRQTDTVNL
ELSNEGIPKSCIQFFFP*IVSRK*EHTYSATPG
TLPPPASEKRSPWIFCFSCHGCNCSWIFNDNKTS
HGFWHHERQNCS**IQVSYGI*GRFQADV**CN
DIQ*ARYRVLQVGEEDPSRRL*DDEQRAAVSFE
AQHVVYAGHGFFSAGSSFGQ*RYSC*GTCP*SCT
STSRNCQEIQKAE*RSYQLHV*A*RECLQLDGQ
YRRGARAGAGGARS*RSSGQDQPVPPRRQDGLS
EEERGREPALQRGQHGRAGR**GGDPPGGLELAL
Q*ATPRLHHAGLQRREKKQSHLSLQCHYCAFDA
E*FSIWRLEVGRDGAALLSLRR*DRRAVCAEPA
GVCEGCWELQQESGGRPPGPDHRRRPL*DALPAE
AEKKCSHEASR*SQGWGHPRRQQQLCSGVHVDE
VLSRRFCGYLHAQLSGEGEEGAGP*RQPFELG*
DDEAPAGPARSTGGARRLSAVVQPQLPVQRLREG
PAPPGKPFSPECRGAARRHPRPL*VSSVSRACG
LCQDLTLDHLQLFYFIFLVLFCTCRVFVIRQGL
*SCPLWHAGSSRGEVMNCLWYHVSRVSKPHEP*G
VESYAKAIWPSCQQRESLYTAP*TLRSGVIHEG
RVAIVSAERVSVHSPVNPEEWSHTRRVCGQAAE
LRAVCVRASRVAPALVSASVDTSVCPTVLGSLLG
GTGMGVSGLILYQSSVFLS*FVSPRQAMVGASQ
GPLGSTGPGWGEESSPVFCLIDEPGKGVCSACP
LQWSVPCP*NVF*L

Frame 1

FRRGPASSATSAQRARAASQGQGAVAAKVRPGA
SCSQPPPRARRRRRHGQEAQEAQGRVALVLRGL
CRQAPGEASKASPEGRRK*SD*TLRIRPRLQLL*
*QVRP*AREAQRKEKEEEEEVREGEASGR*GKK
EAKGREEAEAREGAL*HGGRG*RL*SWEEGGGG
AAPRSASPSVPDTASSRWNLKCCETPDRQIL*TW
SSLMKGYQSLVFNFFFLKLSAENESTPIQQLLE
HFLRQLQRKDPHGFFAFPVTDAIAPGYSMIIKH
PMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAM
TYNRPDTVYYKLAKKILHAGFKMMSKERLLALK
RSMSFMQDMDFSQQAALLGNEDTAVEEPVPEVV
PVQVETAKKSKKPSREVISCMFEPEGNACSLTDS
TAEEHVLALVEHAADEARDRINRFLPGGKMGYL
KRNGDGSLLYSVVNTAEPDADEEETHPVDLSSL
SSKLLPGFTTLGFKDERRNKVTFLSSATTALSMQ
NNSVFGDLKSDEMELLYSAYGDETGVQCALSLQ
EFVKDAGSYSKKVVDDLLDQITGGDHSRTLFQL
KQRRNVPMKPPDEAKVGDTLGDSSSSVLEFMSMK
SYPDVSVDISMLSSLGKVKKELDPDDSHLNLDE
TTKLLQDLHEAQAERGGSRPSSNLSSLSNASER
DQHHLGSPSRLSVGEQPDVTHDPYEFLQSPEPAA
SAKT*L*TTFSSFILFF*FYFARVEFLSSDKDF
DPVPFGMREAAAGR**IVCGIMSAESPSPTNPE
EWSHTRRPYGHRVSRESLCTQPREP*GVESYTKG
VWPSCQQRESLYTAP*TLRSGVIREGCVARLQS
CVPFVSEHHVWLQPLFLPV*TPLSAPLSWGRSW
EAQAWVCLASFCISPVCSCHSLCLPGRPW*GPRR
GHWGAQGQAGVRRAPLFSV*LMSLGKECVLPAR
YSGAFRVHKTFSNW

Frame 2

SGAAQRARQPRRSERGRPARARGRWRPRSDRVP
AVPSPRLGPAAGAAMGKKHKKHKAEWRSSYEDY
ADKPLEKPLKLVLKVGGSEVTELSGSGHDSSYY
DDRSDHERERHKEKKKKKKKKSEKEKHLDDEERR
KRKEEKKRKREREHCDTEGEADDFDPGKKVEVE
PPPDRPVRACRTQPVLGGT*NAVRHQTDRYCEL
GAL**RDTKVLYSIFFSLNCQPKMRAHLFSNSWN
TSSASFREKIPMDFLLFLSRMQLLLDIQ***NI
PWILAP*KTKL*LMNTSQLRNLRQISS*CVIMQ
*HTIGQIPCTTSWRRRSFTQALR**AKSGC*L*S
AACRLCRTWIFLSRQLFWAMKIQLLRNLSLKLY
QYK*KLPRNPKSRVEKLSAACLSLKGMPAA*RT
VPQRSTCWRWWSTQLTKLGTGSTGSSQAARWAI*
RGTGTGACSTAWSTRPSRTLMRRRPTRWT*ARS
PVSYSQASPRWASKTREETKSPFSPVPLLRFRC
RIIQYLAT*SRTRWSCSTQPTEMRQACSVR*ACR
SL*RMLGATARKWWTTSWTRSQAETTLGRSSS*
SREEMFP*SLQMKPRLGTP*ETAAALFWSSCR*
SPIPTFLWISPCSALWGR*RRSWTLTTAI*TWMR
RRSSCRTCTKHRRSAAALGRRPTSAPCPTPPRG
TSTTWEALLA*VSGSSQTSPTTPMSFFSLQSLR
PLPRPNSRPPSALLFYFFSFILHV*SFCHQTRTL
ILSPLACGKQPRGGNELSVVSCQQSLQAPRTLR
SGVIREGHMAIVSAERVSVHSPVNPEEWSHTRR
ACGHRVSRESLCTQPREP*GVESYAKGVWPGCRA
ACRLCPSITCGSSPCFCQCRHLCLPHCPGVALG
RHRHGCVWPHSVSVQCVPVIVCVSQAGHGRGLA
GAIGEHRARLG*GELPCFLFN**AWERSVFCLPV
TVERSVSIKRFLTG

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