Back to Rnomics Platform
Open Session
×
1 warning:
- Access restricted to public data.
Please sign in at Rnomics Platform to access your data.
Sequence NM_001007468
AACGCCAGCGCCTGCGCACTGAGGGCGGCCTGGTCGTCGTCTGCGGCGGCGGCGGCGGCTGAGGAGCCCGGCTGAGGCGCCAGTACCCGGCCCGGTCCGCATTTCGCCTTCCGGCTTCGGTTTCCCTCGGCCCAGCACGCCCCGGCCCCGCCCCAGCCCTCCTGATCCCTCGCAGCCCGGCTCCGGCCGCCCGCCTCTGC
CGCCGCAATGATGATGATGGCGCTGAGCAAGACCTTCGGGCAGAAGCCCGTGAAGTTCCAGCTGGAGGACGACGGCGAGTTCTACATGATCGGCTCCGAG
GTGGGAAACTACCTCCGTATGTTCCGAGGTTCTCTGTACAAGAGATACCCCTCACTCTGGAGGCGACTAGCCACTGTGGAAGAGAGGAAGAAAATAGTTG
CATCGTCACATGATCACGGATACACGACTCTAGCCACCAGTGTGACCCTGTTAAAAGCCTCGGAAGTGGAAGAGATTCTGGATGGCAACGATGAGAAGTA
CAAGGCTGTGTCCATCAGCACAGAGCCCCCCACCTACCTCAGGGAACAGAAGGCCAAGAGGAACAGCCAGTGGGTACCCACCCTGCCCAACAGCTCCCAC
CACTTAGATGCCGTGCCATGCTCCACAACCATCAACAGGAACCGCATGGGCCGAGACAAGAAGAGAACCTTCCCCCTTTGCTTTGATGACCATGACCCAG
CTGTGATCCATGAGAACGCATCTCAGCCCGAGGTGCTGGTCCCCATCCGGCTGGACATGGAGATCGATGGGCAGAAGCTGCGAGACGCCTTCACCTGGAA
CATGAATGAGAAGTTGATGACGCCTGAGATGTTTTCAGAAATCCTCTGTGACGATCTGGATTTGAACCCGCTGACGTTTGTGCCAGCCATCGCCTCTGCC
ATCAGACAGCAGATCGAGTCCTACCCCACGGACAGCATCCTGGAGGACCAGTCAGACCAGCGCGTCATCATCAAGCTGAACATCCATGTGGGAAACATTT
CCCTGGTGGACCAGTTTGAGTGGGACATGTCAGAGAAGGAGAACTCACCAGAGAAGTTTGCCCTGAAGCTGTGCTCGGAGCTGGGGTTGGGCGGGGAGTT
TGTCACCACCATCGCATACAGCATCCGGGGACAGCTGAGCTGGCATCAGAAGACCTACGCCTTCAGCGAGAACCCTCTGCCCACAGTGGAGATTGCCATC
CGGAACACGGGCGATGCGGACCAGTGGTGCCCACTGCTGGAGACTCTGACAGACGCTGAGATGGAGAAGAAGATCCGCGACCAGGACAGGAACACGAGGC
GGATGAGGCGTCTTGCCAACACGGCCCCGGCCTGGTAACCAGCCCATCAGCACACGGCTCCCACGGAGCATCTCAGAAGATTGGGCCGCCTCTCCTCCAT
CTTCTGGCAAGGACAGAGGCGAGGGGACAGCCCAGCGCCATCCTGAGGATCGGGTGGGGGTGGAGTGGGGGCTTCCAGGTGGCCCTTCCCGGCACACATT
CCATTTGTTGAGCCCCAGTCCTGCCCCCCACCCCACCCTCCCTACCCCTCCCCAGTCTCTGGGGTCAGGAAGAAACCTTATTTTAGGTTGTGTTTTGTTT
TTGTATAGGAGCCCCAGGCAGGGCTAGTAACAGTTTTTAAATAAAAGGCAACAGGTCATGTTCAATTTCTTCAACA
- refseq_SMARCB1.F2 (forward primer)
- refseq_SMARCB1.R2 (reverse primer)
- Alternative donor
Frame 0
NASACALRAAWSSSAAAAAAEEPG*GASTRPGPHFAFRLRFPSAQHAPAPPQPS*SLAARLRPPASA
AAMMMMALSKTFGQKPVKFQLEDDGEFYMIGSE
VGNYLRMFRGSLYKRYPSLWRRLATVEERKKIV
ASSHDHGYTTLATSVTLLKASEVEEILDGNDEKY
KAVSISTEPPTYLREQKAKRNSQWVPTLPNSSH
HLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDP
AVIHENASQPEVLVPIRLDMEIDGQKLRDAFTWN
MNEKLMTPEMFSEILCDDLDLNPLTFVPAIASA
IRQQIESYPTDSILEDQSDQRVIIKLNIHVGNI
SLVDQFEWDMSEKENSPEKFALKLCSELGLGGEF
VTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAI
RNTGDADQWCPLLETLTDAEMEKKIRDQDRNTR
RMRRLANTAPAW*PAHQHTAPTEHLRRLGRLSSI
FWQGQRRGDSPAPS*GSGGGGVGASRWPFPAHI
PFVEPQSCPPPHPPYPSPVSGVRKKPYFRLCFV
FV*EPQAGLVTVFK*KATGHVQFLQ
Frame 1
TPAPAH*GRPGRRLRRRRRLRSPAEAPVPGPVRISPSGFGFPRPSTPRPRPSPPDPSQPGSGRPPL
PPQ***WR*ARPSGRSP*SSSWRTTASST*SAPR
WETTSVCSEVLCTRDTPHSGGD*PLWKRGRK*L
HRHMITDTRL*PPV*PC*KPRKWKRFWMATMRS
TRLCPSAQSPPPTSGNRRPRGTASGYPPCPTAPT
T*MPCHAPQPSTGTAWAETRREPSPFALMTMTQ
L*SMRTHLSPRCWSPSGWTWRSMGRSCETPSPG
T*MRS**RLRCFQKSSVTIWI*TR*RLCQPSPLP
SDSRSSPTPRTASWRTSQTSASSSS*TSMWETF
PWWTSLSGTCQRRRTHQRSLP*SCARSWGWAGS
LSPPSHTASGDS*AGIRRPTPSARTLCPQWRLPS
GTRAMRTSGAHCWRL*QTLRWRRRSATRTGTRG
G*GVLPTRPRPGNQPISTRLPRSISEDWAASPP
SSGKDRGEGTAQRHPEDRVGVEWGLPGGPSRHTF
HLLSPSPAPHPTLPTPPQSLGSGRNLILGCVLF
LYRSPRQG**QFLNKRQQVMFNFFN
Frame 2
RQRLRTEGGLVVVCGGGGG*GARLRRQYPARSAFRLPASVSLGPARPGPAPALLIPRSPAPAARLC
RRNDDDGAEQDLRAEAREVPAGGRRRVLHDRLR
GGKLPPYVPRFSVQEIPLTLEATSHCGREEENSC
IVT*SRIHDSSHQCDPVKSLGSGRDSGWQR*EV
QGCVHQHRAPHLPQGTEGQEEQPVGTHPAQQLP
PLRCRAMLHNHQQEPHGPRQEENLPPLL**P*PS
CDP*ERISARGAGPHPAGHGDRWAEAARRLHLE
HE*EVDDA*DVFRNPL*RSGFEPADVCASHRLC
HQTADRVLPHGQHPGGPVRPARHHQAEHPCGKHF
PGGPV*VGHVREGELTREVCPEAVLGAGVGRGV
CHHHRIQHPGTAELASEDLRLQREPSAHSGDCH
PEHGRCGPVVPTAGDSDRR*DGEEDPRPGQEHEA
DEASCQHGPGLVTSPSAHGSHGASQKIGPPLLH
LLARTEARGQPSAILRIGWGWSGGFQVALPGTH
SIC*APVLPPTPPSLPLPSLWGQEETLF*VVFCF
CIGAPGRASNSF*IKGNRSCSISST
Sequence NM_003073
AACGCCAGCGCCTGCGCACTGAGGGCGGCCTGGTCGTCGTCTGCGGCGGCGGCGGCGGCTGAGGAGCCCGGCTGAGGCGCCAGTACCCGGCCCGGTCCGCATTTCGCCTTCCGGCTTCGGTTTCCCTCGGCCCAGCACGCCCCGGCCCCGCCCCAGCCCTCCTGATCCCTCGCAGCCCGGCTCCGGCCGCCCGCCTCTGC
CGCCGCAATGATGATGATGGCGCTGAGCAAGACCTTCGGGCAGAAGCCCGTGAAGTTCCAGCTGGAGGACGACGGCGAGTTCTACATGATCGGCTCCGAG
GTGGGAAACTACCTCCGTATGTTCCGAGGTTCTCTGTACAAGAGATACCCCTCACTCTGGAGGCGACTAGCCACTGTGGAAGAGAGGAAGAAAATAGTTG
CATCGTCACATGGTAAAAAAACAAAACCTAACACTAAGGATCACGGATACACGACTCTAGCCACCAGTGTGACCCTGTTAAAAGCCTCGGAAGTGGAAGA
GATTCTGGATGGCAACGATGAGAAGTACAAGGCTGTGTCCATCAGCACAGAGCCCCCCACCTACCTCAGGGAACAGAAGGCCAAGAGGAACAGCCAGTGG
GTACCCACCCTGCCCAACAGCTCCCACCACTTAGATGCCGTGCCATGCTCCACAACCATCAACAGGAACCGCATGGGCCGAGACAAGAAGAGAACCTTCC
CCCTTTGCTTTGATGACCATGACCCAGCTGTGATCCATGAGAACGCATCTCAGCCCGAGGTGCTGGTCCCCATCCGGCTGGACATGGAGATCGATGGGCA
GAAGCTGCGAGACGCCTTCACCTGGAACATGAATGAGAAGTTGATGACGCCTGAGATGTTTTCAGAAATCCTCTGTGACGATCTGGATTTGAACCCGCTG
ACGTTTGTGCCAGCCATCGCCTCTGCCATCAGACAGCAGATCGAGTCCTACCCCACGGACAGCATCCTGGAGGACCAGTCAGACCAGCGCGTCATCATCA
AGCTGAACATCCATGTGGGAAACATTTCCCTGGTGGACCAGTTTGAGTGGGACATGTCAGAGAAGGAGAACTCACCAGAGAAGTTTGCCCTGAAGCTGTG
CTCGGAGCTGGGGTTGGGCGGGGAGTTTGTCACCACCATCGCATACAGCATCCGGGGACAGCTGAGCTGGCATCAGAAGACCTACGCCTTCAGCGAGAAC
CCTCTGCCCACAGTGGAGATTGCCATCCGGAACACGGGCGATGCGGACCAGTGGTGCCCACTGCTGGAGACTCTGACAGACGCTGAGATGGAGAAGAAGA
TCCGCGACCAGGACAGGAACACGAGGCGGATGAGGCGTCTTGCCAACACGGCCCCGGCCTGGTAACCAGCCCATCAGCACACGGCTCCCACGGAGCATCT
CAGAAGATTGGGCCGCCTCTCCTCCATCTTCTGGCAAGGACAGAGGCGAGGGGACAGCCCAGCGCCATCCTGAGGATCGGGTGGGGGTGGAGTGGGGGCT
TCCAGGTGGCCCTTCCCGGCACACATTCCATTTGTTGAGCCCCAGTCCTGCCCCCCACCCCACCCTCCCTACCCCTCCCCAGTCTCTGGGGTCAGGAAGA
AACCTTATTTTAGGTTGTGTTTTGTTTTTGTATAGGAGCCCCAGGCAGGGCTAGTAACAGTTTTTAAATAAAAGGCAACAGGTCATGTTCAATTTCTTCA
ACA
- refseq_SMARCB1.F2 (forward primer)
- refseq_SMARCB1.R2 (reverse primer)
- Alternative donor
Frame 0
NASACALRAAWSSSAAAAAAEEPG*GASTRPGPHFAFRLRFPSAQHAPAPPQPS*SLAARLRPPASA
AAMMMMALSKTFGQKPVKFQLEDDGEFYMIGSE
VGNYLRMFRGSLYKRYPSLWRRLATVEERKKIV
ASSHGKKTKPNTKDHGYTTLATSVTLLKASEVEE
ILDGNDEKYKAVSISTEPPTYLREQKAKRNSQW
VPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTF
PLCFDDHDPAVIHENASQPEVLVPIRLDMEIDGQ
KLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPL
TFVPAIASAIRQQIESYPTDSILEDQSDQRVII
KLNIHVGNISLVDQFEWDMSEKENSPEKFALKLC
SELGLGGEFVTTIAYSIRGQLSWHQKTYAFSEN
PLPTVEIAIRNTGDADQWCPLLETLTDAEMEKK
IRDQDRNTRRMRRLANTAPAW*PAHQHTAPTEHL
RRLGRLSSIFWQGQRRGDSPAPS*GSGGGGVGA
SRWPFPAHIPFVEPQSCPPPHPPYPSPVSGVRK
KPYFRLCFVFV*EPQAGLVTVFK*KATGHVQFLQ
Frame 1
TPAPAH*GRPGRRLRRRRRLRSPAEAPVPGPVRISPSGFGFPRPSTPRPRPSPPDPSQPGSGRPPL
PPQ***WR*ARPSGRSP*SSSWRTTASST*SAPR
WETTSVCSEVLCTRDTPHSGGD*PLWKRGRK*L
HRHMVKKQNLTLRITDTRL*PPV*PC*KPRKWK
RFWMATMRSTRLCPSAQSPPPTSGNRRPRGTASG
YPPCPTAPTT*MPCHAPQPSTGTAWAETRREPS
PFALMTMTQL*SMRTHLSPRCWSPSGWTWRSMG
RSCETPSPGT*MRS**RLRCFQKSSVTIWI*TR*
RLCQPSPLPSDSRSSPTPRTASWRTSQTSASSS
S*TSMWETFPWWTSLSGTCQRRRTHQRSLP*SC
ARSWGWAGSLSPPSHTASGDS*AGIRRPTPSART
LCPQWRLPSGTRAMRTSGAHCWRL*QTLRWRRR
SATRTGTRGG*GVLPTRPRPGNQPISTRLPRSI
SEDWAASPPSSGKDRGEGTAQRHPEDRVGVEWGL
PGGPSRHTFHLLSPSPAPHPTLPTPPQSLGSGR
NLILGCVLFLYRSPRQG**QFLNKRQQVMFNFF
N
Frame 2
RQRLRTEGGLVVVCGGGGG*GARLRRQYPARSAFRLPASVSLGPARPGPAPALLIPRSPAPAARLC
RRNDDDGAEQDLRAEAREVPAGGRRRVLHDRLR
GGKLPPYVPRFSVQEIPLTLEATSHCGREEENSC
IVTW*KNKT*H*GSRIHDSSHQCDPVKSLGSGR
DSGWQR*EVQGCVHQHRAPHLPQGTEGQEEQPV
GTHPAQQLPPLRCRAMLHNHQQEPHGPRQEENLP
PLL**P*PSCDP*ERISARGAGPHPAGHGDRWA
EAARRLHLEHE*EVDDA*DVFRNPL*RSGFEPA
DVCASHRLCHQTADRVLPHGQHPGGPVRPARHHQ
AEHPCGKHFPGGPV*VGHVREGELTREVCPEAV
LGAGVGRGVCHHHRIQHPGTAELASEDLRLQRE
PSAHSGDCHPEHGRCGPVVPTAGDSDRR*DGEED
PRPGQEHEADEASCQHGPGLVTSPSAHGSHGAS
QKIGPPLLHLLARTEARGQPSAILRIGWGWSGG
FQVALPGTHSIC*APVLPPTPPSLPLPSLWGQEE
TLF*VVFCFCIGAPGRASNSF*IKGNRSCSISS
T
Copyright ©2008,2017, all rights reserved. 