×
1 warning:
  • Access restricted to public data.
    Please sign in at Rnomics Platform to access your data.
Navigation
Sequences

Sequence NM_033294

GGGAGGAGAGAAAAGCCATGGCCGACAAGGTCCTGAAGGAGAAGAGAAAGCTGTTTATCCGTTCCATGGGTGAAGCTCCTCAGGCAGTGCAGGACAACCC
AGCTATGCCCACATCCTCAGGCTCAGAAGGGAATGTCAAGCTTTGCTCCCTAGAAGAAGCTCAAAGGATATGGAAACAAAAGTCGGCAGAGATTTATCCA
ATAATGGACAAGTCAAGCCGCACACGTCTTGCTCTCATTATCTGCAATGAAGAATTTGACAGTATTCCTAGAAGAACTGGAGCTGAGGTTGACATCACAG
GCATGACAATGCTGCTACAAAATCTGGGGTACAGCGTAGATGTGAAAAAAAATCTCACTGCTTCGGACATGACTACAGAGCTGGAGGCATTTGCACACCG
CCCAGAGCACAAGACCTCTGACAGCACGTTCCTGGTGTTCATGTCTCATGGTATTCGGGAAGGCATTTGTGGGAAGAAACACTCTGAGCAAGTCCCAGAT
ATACTACAACTCAATGCAATCTTTAACATGTTGAATACCAAGAACTGCCCAAGTTTGAAGGACAAACCGAAGGTGATCATCATCCAGGCCTGCCGTGGTG
ATAATGTTTCTTGGAGACATCCCACAATGGGCTCTGTTTTTATTGGAAGACTCATTGAACATATGCAAGAATATGCCTGTTCCTGTGATGTGGAGGAAAT
TTTCCGCAAGGTTCGATTTTCATTTGAGCAGCCAGATGGTAGAGCGCAGATGCCCACCACTGAAAGAGTGACTTTGACAAGATGTTTCTACCTCTTCCCA
GGACATTAAAATAAGGAAACTGTATGAATGTCTGTGGGCAGGAAGTGAAGAGATCCTTCTGTAAAGGTTTTTGGAATTATGTCTGCTGAATAATAAACTT
TTTTGAAATAATAAATCTGGTAGAAAAATGAAAA
  • refseq_CASP1.F2 (forward primer)
  • refseq_CASP1.R2 (reverse primer)
  • Exon skipping and alternative donor or acceptor

Frame 0

GRREKPWPTRS*RRRESCLSVPWVKLLRQCRTT
QLCPHPQAQKGMSSFAP*KKLKGYGNKSRQRFIQ
*WTSQAAHVLLSLSAMKNLTVFLEELELRLTSQ
A*QCCYKIWGTA*M*KKISLLRT*LQSWRHLHT
AQSTRPLTARSWCSCLMVFGKAFVGRNTLSKSQI
YYNSMQSLTC*IPRTAQV*RTNRR*SSSRPAVV
IMFLGDIPQWALFLLEDSLNICKNMPVPVMWRK
FSARFDFHLSSQMVERRCPPLKE*L*QDVSTSSQ
DIKIRKLYECLWAGSEEILL*RFLELCLLNNKL
F*NNKSGRKMK

Frame 1

GGEKSHGRQGPEGEEKAVYPFHG*SSSGSAGQP
SYAHILRLRRECQALLPRRSSKDMETKVGRDLS
NNGQVKPHTSCSHYLQ*RI*QYS*KNWS*G*HHR
HDNAATKSGVQRRCEKKSHCFGHDYRAGGICTP
PRAQDL*QHVPGVHVSWYSGRHLWEETL*ASPR
YTTTQCNL*HVEYQELPKFEGQTEGDHHPGLPW*
*CFLETSHNGLCFYWKTH*TYARICLFL*CGGN
FPQGSIFI*AARW*SADAHH*KSDFDKMFLPLP
RTLK*GNCMNVCGQEVKRSFCKGFWNYVC*IINF
FEIINLVEK*K

Frame 2

EERKAMADKVLKEKRKLFIRSMGEAPQAVQDNP
AMPTSSGSEGNVKLCSLEEAQRIWKQKSAEIYP
IMDKSSRTRLALIICNEEFDSIPRRTGAEVDIT
GMTMLLQNLGYSVDVKKNLTASDMTTELEAFAHR
PEHKTSDSTFLVFMSHGIREGICGKKHSEQVPD
ILQLNAIFNMLNTKNCPSLKDKPKVIIIQACRG
DNVSWRHPTMGSVFIGRLIEHMQEYACSCDVEEI
FRKVRFSFEQPDGRAQMPTTERVTLTRCFYLFP
GH*NKETV*MSVGRK*RDPSVKVFGIMSAE**T
FLK**IW*KNE

Sequence NM_033293

GGGAGGAGAGAAAAGCCATGGCCGACAAGGTCCTGAAGGAGAAGAGAAAGCTGTTTATCCGTTCCATGGGTGAAGCTCCTCAGGCAGTGCAGGACAACCC
AGCTATGCCCACATCCTCAGGCTCAGAAGGGAATGTCAAGCTTTGCTCCCTAGAAGAAGCTCAAAGGATATGGAAACAAAAGTCGGCAGAGATTTATCCA
ATAATGGACAAGTCAAGCCGCACACGTCTTGCTCTCATTATCTGCAATGAAGAATTTGACAGTATTCCTAGAAGAACTGGAGCTGAGGTTGACATCACAG
GCATGACAATGCTGCTACAAAATCTGGGGTACAGCGTAGATGTGAAAAAAAATCTCACTGCTTCGGACATGACTACAGAGCTGGAGGCATTTGCACACCG
CCCAGAGCACAAGACCTCTGACAGCACGTTCCTGGTGTTCATGTCTCATGGTATTCGGGAAGGCATTTGTGGGAAGAAACACTCTGAGCAAGTCCCAGAT
ATACTACAACTCAATGCAATCTTTAACATGTTGAATACCAAGAACTGCCCAAGTTTGAAGGACAAACCGAAGGTGATCATCATCCAGGCCTGCCGTGGTG
ACAGCCCTGGTGTGGTGTGGTTTAAAGATTCAGTAGGAGTTTCTGGAAACCTATCTTTACCAACTACAGAAGAGTTTGAGGATGATGCTATTAAGAAAGC
CCACATAGAGAAGGATTTTATCGCTTTCTGCTCTTCCACACCAGATAATGTTTCTTGGAGACATCCCACAATGGGCTCTGTTTTTATTGGAAGACTCATT
GAACATATGCAAGAATATGCCTGTTCCTGTGATGTGGAGGAAATTTTCCGCAAGGTTCGATTTTCATTTGAGCAGCCAGATGGTAGAGCGCAGATGCCCA
CCACTGAAAGAGTGACTTTGACAAGATGTTTCTACCTCTTCCCAGGACATTAAAATAAGGAAACTGTATGAATGTCTGTGGGCAGGAAGTGAAGAGATCC
TTCTGTAAAGGTTTTTGGAATTATGTCTGCTGAATAATAAACTTTTTTGAAATAATAAATCTGGTAGAAAAATGAAAA
  • refseq_CASP1.F2 (forward primer)
  • refseq_CASP1.R2 (reverse primer)
  • Exon skipping and alternative donor or acceptor

Frame 0

GRREKPWPTRS*RRRESCLSVPWVKLLRQCRTT
QLCPHPQAQKGMSSFAP*KKLKGYGNKSRQRFIQ
*WTSQAAHVLLSLSAMKNLTVFLEELELRLTSQ
A*QCCYKIWGTA*M*KKISLLRT*LQSWRHLHT
AQSTRPLTARSWCSCLMVFGKAFVGRNTLSKSQI
YYNSMQSLTC*IPRTAQV*RTNRR*SSSRPAVV
TALVWCGLKIQ*EFLETYLYQLQKSLRMMLLRK
PT*RRILSLSALPHQIMFLGDIPQWALFLLEDSL
NICKNMPVPVMWRKFSARFDFHLSSQMVERRCP
PLKE*L*QDVSTSSQDIKIRKLYECLWAGSEEI
LL*RFLELCLLNNKLF*NNKSGRKMK

Frame 1

GGEKSHGRQGPEGEEKAVYPFHG*SSSGSAGQP
SYAHILRLRRECQALLPRRSSKDMETKVGRDLS
NNGQVKPHTSCSHYLQ*RI*QYS*KNWS*G*HHR
HDNAATKSGVQRRCEKKSHCFGHDYRAGGICTP
PRAQDL*QHVPGVHVSWYSGRHLWEETL*ASPR
YTTTQCNL*HVEYQELPKFEGQTEGDHHPGLPW*
QPWCGVV*RFSRSFWKPIFTNYRRV*G*CY*ES
PHREGFYRFLLFHTR*CFLETSHNGLCFYWKTH
*TYARICLFL*CGGNFPQGSIFI*AARW*SADAH
H*KSDFDKMFLPLPRTLK*GNCMNVCGQEVKRS
FCKGFWNYVC*IINFFEIINLVEK*K

Frame 2

EERKAMADKVLKEKRKLFIRSMGEAPQAVQDNP
AMPTSSGSEGNVKLCSLEEAQRIWKQKSAEIYP
IMDKSSRTRLALIICNEEFDSIPRRTGAEVDIT
GMTMLLQNLGYSVDVKKNLTASDMTTELEAFAHR
PEHKTSDSTFLVFMSHGIREGICGKKHSEQVPD
ILQLNAIFNMLNTKNCPSLKDKPKVIIIQACRG
DSPGVVWFKDSVGVSGNLSLPTTEEFEDDAIKKA
HIEKDFIAFCSSTPDNVSWRHPTMGSVFIGRLI
EHMQEYACSCDVEEIFRKVRFSFEQPDGRAQMP
TTERVTLTRCFYLFPGH*NKETV*MSVGRK*RDP
SVKVFGIMSAE**TFLK**IW*KNE

Sequence NM_033292

GGGAGGAGAGAAAAGCCATGGCCGACAAGGTCCTGAAGGAGAAGAGAAAGCTGTTTATCCGTTCCATGGGTGAAGGTACAATAAATGGCTTACTGGATGA
ATTATTACAGACAAGGGTGCTGAACAAGGAAGAGATGGAGAAAGTAAAACGTGAAAATGCTACAGTTATGGATAAGACCCGAGCTTTGATTGACTCCGTT
ATTCCGAAAGGGGCACAGGCATGCCAAATTTGCATCACATACATTTGTGAAGAAGACAGTTACCTGGCAGGGACGCTGGGACTCTCAGCAGATCAAACAT
CTGGAAATTACCTTAATATGCAAGACTCTCAAGGAGTACTTTCTTCCTTTCCAG
CTCCTCAGGCAGTGCAGGACAACCCAGCTATGCCCACATCCTCAGG
CTCAGAAGGGAATGTCAA
GCTTTGCTCCCTAGAAGAAGCTCAAAGGATATGGAAACAAAAGTCGGCAGAGATTTATCCAATAATGGACAAGTCAAGCCGC
ACACGTCTTGCTCTCATTATCTGCAATGAAGAATTTGACAGTATTCCTAGAAGAACTGGAGCTGAGGTTGACATCACAGGCATGACAATGCTGCTACAAA
ATCTGGGGTACAGCGTAGATGTGAAAAAAAATCTCACTGCTTCGGACATGACTACAGAGCTGGAGGCATTTGCACACCGCCCAGAGCACAAGACCTCTGA
CAGCACGTTCCTGGTGTTCATGTCTCATGGTATTCGGGAAGGCATTTGTGGGAAGAAACACTCTGAGCAAGTCCCAGATATACTACAACTCAATGCAATC
TTTAACATGTTGAATACCAAGAACTGCCCAAGTTTGAAGGACAAACCGAAGGTGATCATCATCCAGGCCTGCCGTGGTGACAGCCCTGGTGTGGTGTGGT
TTAAAGATTCAGTAGGAGTTTCTGGAAACCTATCTTTACCAACTACAGAAGAGTTTGAGGATGATGCTATTAAGAAAGCCCACATAGAGAAGGATTTTAT
CGCTTTCTGCTCTTCCACACCAGATAATGTTTCTTGGAGACATCCCACAATGGGCTCTGTTTTTATTGGAAGACTCATTGAACATATGCAAGAATATGCC
TGTTCCTGTGATGTGGAGGAAATTTTCCGCAAGGTTCGATTTTCATTTGAGCAGCCAGATGGTAGAGCGCAGATGCCCACCACTGAAAGAGTGACTTTGA
CAAGATGTTTCTACCTCTTCCCAGGACATTAAAATAAGGAAACTGTATGAATGTCTGTGGGCAGGAAGTGAAGAGATCCTTCTGTAAAGGTTTTTGGAAT
TATGTCTGCTGAATAATAAACTTTTTTGAAATAATAAATCTGGTAGAAAAATGAAAA
  • refseq_CASP1.F2 (forward primer)
  • refseq_CASP1.R2 (reverse primer)
  • Exon skipping and alternative donor or acceptor

Frame 0

GRREKPWPTRS*RRRESCLSVPWVKVQ*MAYWM
NYYRQGC*TRKRWRK*NVKMLQLWIRPEL*LTPL
FRKGHRHAKFASHTFVKKTVTWQGRWDSQQIKH
LEITLICKTLKEYFLPFQ
LLRQCRTTQLCPHPQ
AQKGMS
SFAP*KKLKGYGNKSRQRFIQ*WTSQAA
HVLLSLSAMKNLTVFLEELELRLTSQA*QCCYK
IWGTA*M*KKISLLRT*LQSWRHLHTAQSTRPL
TARSWCSCLMVFGKAFVGRNTLSKSQIYYNSMQS
LTC*IPRTAQV*RTNRR*SSSRPAVVTALVWCG
LKIQ*EFLETYLYQLQKSLRMMLLRKPT*RRIL
SLSALPHQIMFLGDIPQWALFLLEDSLNICKNMP
VPVMWRKFSARFDFHLSSQMVERRCPPLKE*L*
QDVSTSSQDIKIRKLYECLWAGSEEILL*RFLE
LCLLNNKLF*NNKSGRKMK

Frame 1

GGEKSHGRQGPEGEEKAVYPFHG*RYNKWLTG*
IITDKGAEQGRDGESKT*KCYSYG*DPSFD*LR
YSERGTGMPNLHHIHL*RRQLPGRDAGTLSRSNI
WKLP*YARLSRSTFFLSS
SSGSAGQPSYAHILR
LRRECQ
ALLPRRSSKDMETKVGRDLSNNGQVKP
HTSCSHYLQ*RI*QYS*KNWS*G*HHRHDNAATK
SGVQRRCEKKSHCFGHDYRAGGICTPPRAQDL*
QHVPGVHVSWYSGRHLWEETL*ASPRYTTTQCN
L*HVEYQELPKFEGQTEGDHHPGLPW*QPWCGVV
*RFSRSFWKPIFTNYRRV*G*CY*ESPHREGFY
RFLLFHTR*CFLETSHNGLCFYWKTH*TYARIC
LFL*CGGNFPQGSIFI*AARW*SADAHH*KSDFD
KMFLPLPRTLK*GNCMNVCGQEVKRSFCKGFWN
YVC*IINFFEIINLVEK*K

Frame 2

EERKAMADKVLKEKRKLFIRSMGEGTINGLLDE
LLQTRVLNKEEMEKVKRENATVMDKTRALIDSV
IPKGAQACQICITYICEEDSYLAGTLGLSADQT
SGNYLNMQDSQGVLSSFP
APQAVQDNPAMPTSSG
SEGNVK
LCSLEEAQRIWKQKSAEIYPIMDKSSR
TRLALIICNEEFDSIPRRTGAEVDITGMTMLLQ
NLGYSVDVKKNLTASDMTTELEAFAHRPEHKTSD
STFLVFMSHGIREGICGKKHSEQVPDILQLNAI
FNMLNTKNCPSLKDKPKVIIIQACRGDSPGVVW
FKDSVGVSGNLSLPTTEEFEDDAIKKAHIEKDFI
AFCSSTPDNVSWRHPTMGSVFIGRLIEHMQEYA
CSCDVEEIFRKVRFSFEQPDGRAQMPTTERVTL
TRCFYLFPGH*NKETV*MSVGRK*RDPSVKVFGI
MSAE**TFLK**IW*KNE

Copyright ©2008,2017, all rights reserved.