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Sequence NM_080598
CTCAGCTAGGGCCTGCCGGTTCCTAGTGCGTGCCCAGCAGTCCTCAGGTCACCTTCACTACCGGGCCAAGGACCCCGTGGGAACTCGCAGCCTTCGCCACACTCGTTCCTCGCGCATCCATGGAGGGGTGCCTACAGAGAAGACCTGCGTGGCAAAAACCTAAACGAAGAGATGAGGGGCATGGAGAGGAGTAGGATAAG
AGAATAAAGATAACAGTGGGGGGGAGACGTTAGTTTCCTTTATATCTTTTGTTACTGGCGGTAGCAGTGAAGTTAGAAACGGTTTTAAAACAAATTTCAG
ACAGGCATTTTCCAAAGGCAAGCCTGGAGCGCACGGATCTGTATAACCGCGGAAGGCCCTGTTTCCGGTCCCTTGCGCCTGCGCTCTTGCAGCCAAGAAG
GCGGGAGGCTGGAGTAGAGGGAAGCCTGCAACCGGAAGTGAAGGCAGATTTCCCTCCTTCGTCGCTGTTGCTGCCGCCATACGCGCTCTCCCTGTTTAGT
TATGGCAGAGAACGATGTGGACAATGAGCTCTTGGACTATGAAGATGATGAGGTGGAGACAGCAGCTGGGGGAGATGGGGCTGAGGCCCCTGCCAAGAAG
GATGTCAAGGGCTCCTATGTCTCCATCCACAGCTCTGGCTTTCGTGACTTCCTGCTCAAGCCAGAGTTGCTCCGGGCCATTGTCGACTGTGGCTTTGAGC
ATCCGTCAGAAGTCCAGCATGAGTGCATCCCTCAGGCCATTCTGGGAATGGATGTCCTGTGCCAGGCCAAGTCGGGCATGGGAAAGACAGCAGTGTTTGT
CTTGGCCACACTGCAACAGCTGGAGCCAGTTACTGGGCAGGTGTCTGTACTGGTGATGTGTCACACTCGGGAGTTGGCTTTTCAGATCAGCAAGGAATAT
GAGCGCTTCTCTAAATACATGCCCAATGTCAAGGTTGCTGTTTTTTTTGGTGGTCTGTCTATCAAGAAGGATGAAGAGGTGCTGAAGAAGAACTGCCCGC
ATATCGTCGTGGGGACTCCAGGCCGTATCCTAGCCCTGGCTCGAAATAAGAGCCTCAACCTCAAACACATTAAACACTTTATTTTGGATGAATGTGATAA
GATGCTTGAACAGCTCGACATGCGTCGGGATGTCCAGGAAATTTTTCGCATGACCCCCCACGAGAAGCAGGTCATGATGTTCAGTGCTACCTTGAGCAAA
GAGATCCGTCCAGTCTGCCGCAAGTTCATGCAAGATCCAATGGAGATCTTCGTGGATGATGAGACGAAGTTGACGCTGCATGGGTTGCAGCAGTACTACG
TGAAACTGAAGGACAACGAGAAGAACCGGAAGCTCTTTGACCTTCTGGATGTCCTTGAGTTCAACCAGGTGGTGATCTTTGTGAAGTCTGTGCAGCGGTG
CATTGCCTTGGCCCAGCTACTAGTGGAGCAGAACTTCCCAGCCATTGCCATCCACCGTGGGATGCCCCAGGAGGAGAGGCTTTCTCGGTATCAGCAGTTT
AAAGATTTTCAACGACGAATTCTTGTGGCTACCAACCTATTTGGCCGAGGCATGGACATCGAGCGGGTGAACATTGCTTTTAATTATGACATGCCTGAGG
ATTCTGACACCTACCTGCATCGGGTGGCCAGAGCAGGCCGGTTTGGCACCAAGGGCTTGGCTATCACATTTGTGTCCGATGAGAATGATGCCAAGATCCT
CAATGATGTGCAGGATCGCTTTGAGGTCAATATTAGTGAGCTGCCTGATGAGATAGACATCTCCTCCTACATTGAACAGACACGGTAGAAGACTCGCCCA
TTTTGGAATGTGACCGTCTGTCCTTCAGGAGAGGACACCAGGGTGGGGGTGAAGGAGACACTACTGCCCCCACCCCTGACAGCCCCCACCCCATGGCTTC
CATCTTTTGCATCACCACCACTCCTGAACCCCCATTTCTGATTTGTCAGAATTTTTTTTTAACAAAACTAAAAATGAAACACATGTGTCTGTGGTATCTA
TAA
- refseq_BAT1.F1 (forward primer)
- refseq_BAT1.R1 (reverse primer)
- Alternative acceptor
Frame 0
LS*GLPVPSACPAVLRSPSLPGQGPRGNSQPSPHSFLAHPWRGAYREDLRGKNLNEEMRGMERSRIR
E*R*QWGGDVSFLYIFCYWR*Q*S*KRF*NKFQ
TGIFQRQAWSARICITAEGPVSGPLRLRSCSQE
GGRLE*REACNRK*RQISLLRRCCCRHTRSPCLV
MAENDVDNELLDYEDDEVETAAGGDGAEAPAKK
DVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFE
HPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFV
LATLQQLEPVTGQVSVLVMCHTRELAFQISKEY
ERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCP
HIVVGTPGRILALARNKSLNLKHIKHFILDECDK
MLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSK
EIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYY
VKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRC
IALAQLLVEQNFPAIAIHRGMPQEERLSRYQQF
KDFQRRILVATNLFGRGMDIERVNIAFNYDMPE
DSDTYLHRVARAGRFGTKGLAITFVSDENDAKIL
NDVQDRFEVNISELPDEIDISSYIEQTR*KTRP
FWNVTVCPSGEDTRVGVKETLLPPPLTAPTPWL
PSFASPPLLNPHF*FVRIFF*QN*K*NTCVCGIY
Frame 1
SARACRFLVRAQQSSGHLHYRAKDPVGTRSLRHTRSSRIHGGVPTEKTCVAKT*TKR*GAWRGVG*
ENKDNSGGETLVSFISFVTGGSSEVRNGFKTNFR
QAFSKGKPGAHGSV*PRKALFPVPCACALAAKK
AGGWSRGKPATGSEGRFPSFVAVAAAIRALPV*
LWQRTMWTMSSWTMKMMRWRQQLGEMGLRPLPRR
MSRAPMSPSTALAFVTSCSSQSCSGPLSTVALS
IRQKSSMSASLRPFWEWMSCARPSRAWERQQCL
SWPHCNSWSQLLGRCLYW*CVTLGSWLFRSARNM
SASLNTCPMSRLLFFLVVCLSRRMKRC*RRTAR
ISSWGLQAVS*PWLEIRASTSNTLNTLFWMNVI
RCLNSSTCVGMSRKFFA*PPTRSRS*CSVLP*AK
RSVQSAASSCKIQWRSSWMMRRS*RCMGCSSTT
*N*RTTRRTGSSLTFWMSLSSTRW*SL*SLCSG
ALPWPSY*WSRTSQPLPSTVGCPRRRGFLGISSL
KIFNDEFLWLPTYLAEAWTSSG*TLLLIMTCLR
ILTPTCIGWPEQAGLAPRAWLSHLCPMRMMPRS
SMMCRIALRSILVSCLMR*TSPPTLNRHGRRLAH
FGM*PSVLQERTPGWG*RRHYCPHP*QPPPHGF
HLLHHHHS*TPISDLSEFFFNKTKNETHVSVVS
I
Frame 2
QLGPAGS*CVPSSPQVTFTTGPRTPWELAAFATLVPRASMEGCLQRRPAWQKPKRRDEGHGEE*DK
RIKITVGGRR*FPLYLLLLAVAVKLETVLKQIS
DRHFPKASLERTDLYNRGRPCFRSLAPALLQPRR
REAGVEGSLQPEVKADFPPSSLLLPPYALSLFS
YGRERCGQ*ALGL*R**GGDSSWGRWG*GPCQE
GCQGLLCLHPQLWLS*LPAQARVAPGHCRLWL*A
SVRSPA*VHPSGHSGNGCPVPGQVGHGKDSSVC
LGHTATAGASYWAGVCTGDVSHSGVGFSDQQGI
*ALL*IHAQCQGCCFFWWSVYQEG*RGAEEELPA
YRRGDSRPYPSPGSK*EPQPQTH*TLYFG*M**
DA*TARHASGCPGNFSHDPPREAGHDVQCYLEQ
RDPSSLPQVHARSNGDLRG**DEVDAAWVAAVLR
ETEGQREEPEAL*PSGCP*VQPGGDLCEVCAAV
HCLGPATSGAELPSHCHPPWDAPGGEAFSVSAV
*RFSTTNSCGYQPIWPRHGHRAGEHCF*L*HA*G
F*HLPASGGQSRPVWHQGLGYHICVR*E*CQDP
Q*CAGSL*GQY**AA**DRHLLLH*TDTVEDSP
ILECDRLSFRRGHQGGGEGDTTAPTPDSPHPMAS
IFCITTTPEPPFLICQNFFLTKLKMKHMCLWYL
*
Sequence NM_004640
CTCAGCTAGGGCCTGCCGGTTCCTAGTGCGTGCCCAGCAGTCCTCAGGTCACCTTCACTACCGGGCCAAGGACCCCGTGGGAACTCGCAGCCTTCGCCACACTCGTTCCTCGCGCATCCATGGAGGGGTGCCTACAGAGAAGACCTGCGTGGCAAAAACCTAAACGAAGAGATGAGGGGCATGGAGAGGAGTAGGATAAG
AGAATAAAGATAACAGTGGGGGGGAGACGTTAGTTTCCTTTATATCTTTTGTTACTGGCGGTAGCAGTGAAGTTAGAAACGGTTTTAAAACAAATTTCAG
ACAGGCATTTTCCAAAGGCAAGCCTGGAGCGCACGGATCTGTATAACCGCGGAAGGCCCTGTTTCCGGTCCCTTGCGCCTGCGCTCTTGCAGCCAAGAAG
GCGGGAGGCTGGAGTAGAGGGAAGCCTGCAACCGGAAGTGAAGGCAGATTTCCCTCCTTCGTCGCTGTTGCTGCCGCCATACGCGCTCTCCCTGTTTAGC
TCTTCTGTTAGAAATAGTATCTTTGTTTTCCTTTGCTGTTCCTCAATCCCCTACTCTTCACCCCTTGTTTTCACCTATTTTGCGAGAACCCATCCAGATC
CCCCTTCCCTTCTTCCCCTGCCGGCCCAGTTATGGCAGAGAACGATGTGGACAATGAGCTCTTGGACTATGAAGATGATGAGGTGGAGACAGCAGCTGGG
GGAGATGGGGCTGAGGCCCCTGCCAAGAAGGATGTCAAGGGCTCCTATGTCTCCATCCACAGCTCTGGCTTTCGTGACTTCCTGCTCAAGCCAGAGTTGC
TCCGGGCCATTGTCGACTGTGGCTTTGAGCATCCGTCAGAAGTCCAGCATGAGTGCATCCCTCAGGCCATTCTGGGAATGGATGTCCTGTGCCAGGCCAA
GTCGGGCATGGGAAAGACAGCAGTGTTTGTCTTGGCCACACTGCAACAGCTGGAGCCAGTTACTGGGCAGGTGTCTGTACTGGTGATGTGTCACACTCGG
GAGTTGGCTTTTCAGATCAGCAAGGAATATGAGCGCTTCTCTAAATACATGCCCAATGTCAAGGTTGCTGTTTTTTTTGGTGGTCTGTCTATCAAGAAGG
ATGAAGAGGTGCTGAAGAAGAACTGCCCGCATATCGTCGTGGGGACTCCAGGCCGTATCCTAGCCCTGGCTCGAAATAAGAGCCTCAACCTCAAACACAT
TAAACACTTTATTTTGGATGAATGTGATAAGATGCTTGAACAGCTCGACATGCGTCGGGATGTCCAGGAAATTTTTCGCATGACCCCCCACGAGAAGCAG
GTCATGATGTTCAGTGCTACCTTGAGCAAAGAGATCCGTCCAGTCTGCCGCAAGTTCATGCAAGATCCAATGGAGATCTTCGTGGATGATGAGACGAAGT
TGACGCTGCATGGGTTGCAGCAGTACTACGTGAAACTGAAGGACAACGAGAAGAACCGGAAGCTCTTTGACCTTCTGGATGTCCTTGAGTTCAACCAGGT
GGTGATCTTTGTGAAGTCTGTGCAGCGGTGCATTGCCTTGGCCCAGCTACTAGTGGAGCAGAACTTCCCAGCCATTGCCATCCACCGTGGGATGCCCCAG
GAGGAGAGGCTTTCTCGGTATCAGCAGTTTAAAGATTTTCAACGACGAATTCTTGTGGCTACCAACCTATTTGGCCGAGGCATGGACATCGAGCGGGTGA
ACATTGCTTTTAATTATGACATGCCTGAGGATTCTGACACCTACCTGCATCGGGTGGCCAGAGCAGGCCGGTTTGGCACCAAGGGCTTGGCTATCACATT
TGTGTCCGATGAGAATGATGCCAAGATCCTCAATGATGTGCAGGATCGCTTTGAGGTCAATATTAGTGAGCTGCCTGATGAGATAGACATCTCCTCCTAC
ATTGAACAGACACGGTAGAAGACTCGCCCATTTTGGAATGTGACCGTCTGTCCTTCAGGAGAGGACACCAGGGTGGGGGTGAAGGAGACACTACTGCCCC
CACCCCTGACAGCCCCCACCCCATGGCTTCCATCTTTTGCATCACCACCACTCCTGAACCCCCATTTCTGATTTGTCAGAATTTTTTTTTAACAAAACTA
AAAATGAAACACATGTGTCTGTGGTATCTATAA
- refseq_BAT1.F1 (forward primer)
- refseq_BAT1.R1 (reverse primer)
- Alternative acceptor
Frame 0
LS*GLPVPSACPAVLRSPSLPGQGPRGNSQPSPHSFLAHPWRGAYREDLRGKNLNEEMRGMERSRIR
E*R*QWGGDVSFLYIFCYWR*Q*S*KRF*NKFQ
TGIFQRQAWSARICITAEGPVSGPLRLRSCSQE
GGRLE*REACNRK*RQISLLRRCCCRHTRSPCLA
LLLEIVSLFSFAVPQSPTLHPLFSPILREPIQI
PLPFFPCRPSYGRERCGQ*ALGL*R**GGDSSW
GRWG*GPCQEGCQGLLCLHPQLWLS*LPAQARVA
PGHCRLWL*ASVRSPA*VHPSGHSGNGCPVPGQ
VGHGKDSSVCLGHTATAGASYWAGVCTGDVSHS
GVGFSDQQGI*ALL*IHAQCQGCCFFWWSVYQEG
*RGAEEELPAYRRGDSRPYPSPGSK*EPQPQTH
*TLYFG*M**DA*TARHASGCPGNFSHDPPREA
GHDVQCYLEQRDPSSLPQVHARSNGDLRG**DEV
DAAWVAAVLRETEGQREEPEAL*PSGCP*VQPG
GDLCEVCAAVHCLGPATSGAELPSHCHPPWDAP
GGEAFSVSAV*RFSTTNSCGYQPIWPRHGHRAGE
HCF*L*HA*GF*HLPASGGQSRPVWHQGLGYHI
CVR*E*CQDPQ*CAGSL*GQY**AA**DRHLLL
H*TDTVEDSPILECDRLSFRRGHQGGGEGDTTAP
TPDSPHPMASIFCITTTPEPPFLICQNFFLTKL
KMKHMCLWYL*
Frame 1
SARACRFLVRAQQSSGHLHYRAKDPVGTRSLRHTRSSRIHGGVPTEKTCVAKT*TKR*GAWRGVG*
ENKDNSGGETLVSFISFVTGGSSEVRNGFKTNFR
QAFSKGKPGAHGSV*PRKALFPVPCACALAAKK
AGGWSRGKPATGSEGRFPSFVAVAAAIRALPV*
LFC*K*YLCFPLLFLNPLLFTPCFHLFCENPSRS
PFPSSPAGPVMAENDVDNELLDYEDDEVETAAG
GDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPEL
LRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAK
SGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTR
ELAFQISKEYERFSKYMPNVKVAVFFGGLSIKK
DEEVLKKNCPHIVVGTPGRILALARNKSLNLKHI
KHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQ
VMMFSATLSKEIRPVCRKFMQDPMEIFVDDETK
LTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQV
VIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQ
EERLSRYQQFKDFQRRILVATNLFGRGMDIERV
NIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITF
VSDENDAKILNDVQDRFEVNISELPDEIDISSY
IEQTR*KTRPFWNVTVCPSGEDTRVGVKETLLP
PPLTAPTPWLPSFASPPLLNPHF*FVRIFF*QN*
K*NTCVCGIY
Frame 2
QLGPAGS*CVPSSPQVTFTTGPRTPWELAAFATLVPRASMEGCLQRRPAWQKPKRRDEGHGEE*DK
RIKITVGGRR*FPLYLLLLAVAVKLETVLKQIS
DRHFPKASLERTDLYNRGRPCFRSLAPALLQPRR
REAGVEGSLQPEVKADFPPSSLLLPPYALSLFS
SSVRNSIFVFLCCSSIPYSSPLVFTYFARTHPD
PPSLLPLPAQLWQRTMWTMSSWTMKMMRWRQQLG
EMGLRPLPRRMSRAPMSPSTALAFVTSCSSQSC
SGPLSTVALSIRQKSSMSASLRPFWEWMSCARP
SRAWERQQCLSWPHCNSWSQLLGRCLYW*CVTLG
SWLFRSARNMSASLNTCPMSRLLFFLVVCLSRR
MKRC*RRTARISSWGLQAVS*PWLEIRASTSNT
LNTLFWMNVIRCLNSSTCVGMSRKFFA*PPTRSR
S*CSVLP*AKRSVQSAASSCKIQWRSSWMMRRS
*RCMGCSSTT*N*RTTRRTGSSLTFWMSLSSTR
W*SL*SLCSGALPWPSY*WSRTSQPLPSTVGCPR
RRGFLGISSLKIFNDEFLWLPTYLAEAWTSSG*
TLLLIMTCLRILTPTCIGWPEQAGLAPRAWLSH
LCPMRMMPRSSMMCRIALRSILVSCLMR*TSPPT
LNRHGRRLAHFGM*PSVLQERTPGWG*RRHYCP
HP*QPPPHGFHLLHHHHS*TPISDLSEFFFNKT
KNETHVSVVSI
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