Sequences - Rnomics 📊 Palace

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Sequences

Sequence MRPS11.gAug05

AGTCCCGGAACTGCTAGAACGAACCATTCGCATATGGAGGGGGTGACCCACCATCTCAGAACATTAAAAAAGGGAAAGAATCCCCTGGTGAACTACAGTG AAAGTCTTATTGAGCATTTAAATGGAAATAAAAATATTCAGTGGACCTAATGAAGAGTAGATGACTTTCCCTTCTGTCCCCTCCCCGACAGGCACTCATG GTACCGGCGCCGGCGCAGCTGTGACTGTCGCTGCAGACGGAAACTGACTGGGGTCAATTCAAGTCATGCAGGCTGTGAGAAACGCGGGGTCGCGGTTCCT GCGGTCCTGGACTTGGCCCCAGACAGCCGGGGTCGTGGCCAGAACGCCGGCCGGGACCATCTGCACAGGCGCTCGACAGCTCCAAGACGCTGCGGCCAAG CAGAAAGTTGAACAGAACGCGGCTCCCAGCCACACCAAGTTCAGAGTCCAGATATTGTCTATGGTTGATGAAATAAGAAACAGAGGTTTGACTGTATTTT TTAAATTGTGGGAAGAGGAACCTACAAAGGATCTGAAAATAATGAACACGGGTATACCTGCAGGGACAAGGAAGATGGGGAGTATGCATGAAAATCCCTT CTCATAGCGGAAAGTCCCCAGATGTGTCTGAAGTCAGCAAGTCAAGAAACAGCATCATAAGCACAGCAGTCACACATGCGGTGGTGGCACCAGAAGGACT GAAAAGGAATGGTGGGGGCAGCCACTTAAGAAGCAGCAGGGGGCACAGAGCTGTTATTTTTTAACCATGTGTTGTATTTCTTTGATTTTTAAAAAGTCGA GACAATTTTAAATAAAATCTTTCTTCTAATTGCAGCATTTACCCTCCCATTCCAGGAGAGGAGAGCTCTCTGAGGTGGGCAGGAAAGAAATTTGAGGAGA TCCCAATTGCACACATTAAAGCATCCCACAACAACACACAGATCCAGGTAGTCTCTGCTAGTAATGAGCCCCTTGCCTTTGCTTCCTGTGGCACAGAGGG ATTTCGGAATGCCAAGAAGGGCACAGGCATCGCAGCACAGACAGCAGGCATAGCCGCAGCGGCGTCTGCCATGCACGGACTGATCATGGGCGGCCTGGAA GTGATCTCAATCACAGACAACACCCCAATCCCACACAACGGCTGCCGCCCCAGGAAGGCTCGGAAGCTGTGATGGGAAGGAGGCCTGCACTTGGACCTGA CCTCAAGCCTCAGCTCCAGTGGGACCTTGTAAAATGCTCCCTGTCAGAGCTCTCCAGAATATGCTTGTTGGAGATCCTTCAGGCAGTAAGGGAGAGTTTT GCCTCCTTACACAGTGGCCTTTGCTTGCACCTCCAGCTGGAGATGGGTGTGCCCCAGAAGTAAGCTTTGCATCTCTTACAAGAGGGGAGCTACAGGGGCA GCCGTGGCCTAGGCCCAAACTCTGCTCTGAGAAAATAAATATCTGTACCACCTGTCATAATTTTGAGATTTTTTGCTTTCAGAGTTACGTAATTCCTAAT TCCTCTTGAAAAAGAGAGTGTGAAATGAGGTGAGGCCTCAGATGAAAGTAAAATATAAATGTGAGTTGCTATTTACCAGACACTTCTGGTTTCAGATATT TCTTTTCTAGCCCCTTACCCAAGATTTCTAGAGCTAATCCTAGTAACTTTTCTTATTAATGACTTATAATTTGGCCCCAAATTGGAGCTTTTTGCCACCT ACCTCTGGATTCTGATGGATTTCGCCATTATGGGCATGTTTAAAGTTAGCCCTAAACACAGGATTTTCTACAAGTGGACAGTCAAACTCCCCACACTAAA GTGGCAGTCATCGTTTACACTCCATGGGCTTCAGCAGTCCCAGCACTAACGAGAGAGTGCCCTAAAAGCGGGGAGGGTAGAGTTGTACAAAACATGATTC TTGGCCAGGCACGGTGGCTCACACCTGTAACCCTGGCACTTTGGGAGGCCAAGGCGGGTGGATCACTTGAGTCCAGTTAGAGACCAGCCTGGGCAACATG GTGAAACCCCCTCTCTACTAAAAATACAAAAATTAACCAGGCATGGTGGTGTGCGCCTGTAATCCCAGCTACTCTGGAGGCTGAGGCATGAAAATCGCTT GAACCCAGGAGGTGGAGGCTGCAGTGAGCTGAGATCATCCTACTGCACTCCAGCCCAGGTGACAGCGAGACTGTCTCAAAAAAATAAATAAATATAAATA AAAATTT

MRPS11.u.f.6 (forward primer)
MRPS11.u.r.10 (reverse primer)
Alternative acceptor

Frame 0

SPGTARTNHSHMEGVTHHLRTLKKGKNPLVNYS ESLIEHLNGNKNIQWT**RVDDFPFCPLPDRHSW YRRRRSCDCRCRRKLTGVNSSHAGCEKRGVAVP AVLDLAPDSRGRGQNAGRDHLHRRSTAPRRCGQ AES*TERGSQPHQVQSPDIVYG**NKKQRFDCIF *IVGRGTYKGSENNEHGYTCRDKEDGEYA*KSL LIAESPQMCLKSASQETAS*AQQSHMRWWHQKD *KGMVGAAT*EAAGGTELLFFNHVLYFFDF*KVE TILNKIFLLIAAFTLPFQERRAL*GGQERNLRR SQLHTLKHPTTTHRSR*SLLVMSPLPLLPVAQR DFGMPRRAQASQHRQQA*PQRRLPCTD*SWAAWK *SQSQTTPQSHTTAAAPGRLGSCDGKEACTWT* PQASAPVGPCKMLPVRALQNMLVGDPSGSKGEF CLLTQWPLLAPPAGDGCAPEVSFASLTRGELQGQ PWPRPKLCSEKINICTTCHNFEIFCFQSYVIPN SS*KRECEMR*GLR*K*NINVSCYLPDTSGFRY FFSSPLPKISRANPSNFSY**LIIWPQIGAFCHL PLDSDGFRHYGHV*S*P*TQDFLQVDSQTPHTK VAVIVYTPWASAVPALTRECPKSGEGRVVQNMI LGQARWLTPVTLALWEAKAGGSLESS*RPAWATW *NPLSTKNTKINQAWWCAPVIPATLEAEA*KSL EPRRWRLQ*AEIILLHSSPGDSETVSKK*ININ KN

Frame 1

VPELLERTIRIWRG*PTISEH*KRERIPW*TTV KVLLSI*MEIKIFSGPNEE*MTFPSVPSPTGTH GTGAGAAVTVAADGN*LGSIQVMQAVRNAGSRFL RSWTWPQTAGVVARTPAGTICTGARQLQDAAAK QKVEQNAAPSHTKFRVQILSMVDEIRNRGLTVF FKLWEEEPTKDLKIMNTGIPAGTRKMGSMHENPF S*RKVPRCV*SQQVKKQHHKHSSHTCGGGTRRT EKEWWGQPLKKQQGAQSCYFLTMCCISLIFKKS RQF*IKSFF*LQHLPSHSRRGELSEVGRKEI*GD PNCTH*SIPQQHTDPGSLC***APCLCFLWHRG ISECQEGHRHRSTDSRHSRSGVCHARTDHGRPG SDLNHRQHPNPTQRLPPQEGSEAVMGRRPALGPD LKPQLQWDLVKCSLSELSRICLLEILQAVRESF ASLHSGLCLHLQLEMGVPQK*ALHLLQEGSYRG SRGLGPNSALRK*ISVPPVIILRFFAFRVT*FLI PLEKESVK*GEASDESKI*M*VAIYQTLLVSDI SFLAPYPRFLELILVTFLINDL*FGPKLELFAT YLWILMDFAIMGMFKVSPKHRIFYKWTVKLPTLK WQSSFTLHGLQQSQH*RESALKAGRVELYKT*F LARHGGSHL*PWHFGRPRRVDHLSPVRDQPGQH GETPSLLKIQKLTRHGGVRL*SQLLWRLRHENRL NPGGGGCSELRSSYCTPAQVTARLSQKNK*I*I KI

Frame 2

SRNC*NEPFAYGGGDPPSQNIKKGKESPGELQ* KSY*AFKWK*KYSVDLMKSR*LSLLSPPRQALM VPAPAQL*LSLQTETDWGQFKSCRL*ETRGRGS CGPGLGPRQPGSWPERRPGPSAQALDSSKTLRPS RKLNRTRLPATPSSESRYCLWLMK*ETEV*LYF LNCGKRNLQRI*K**TRVYLQGQGRWGVCMKIP SHSGKSPDVSEVSKSRNSIISTAVTHAVVAPEGL KRNGGGSHLRSSRGHRAVIF*PCVVFL*FLKSR DNFK*NLSSNCSIYPPIPGEESSLRWAGKKFEE IPIAHIKASHNNTQIQVVSASNEPLAFASCGTEG FRNAKKGTGIAAQTAGIAAAASAMHGLIMGGLE VISITDNTPIPHNGCRPRKARKL*WEGGLHLDL TSSLSSSGTL*NAPCQSSPEYACWRSFRQ*GRVL PPYTVAFACTSSWRWVCPRSKLCISYKRGATGA AVA*AQTLL*ENKYLYHLS*F*DFLLSELRNS* FLLKKRV*NEVRPQMKVKYKCELLFTRHFWFQIF LF*PLTQDF*S*S**LFLLMTYNLAPNWSFLPP TSGF*WISPLWACLKLALNTGFSTSGQSNSPH* SGSHRLHSMGFSSPSTNERVP*KRGG*SCTKHDS WPGTVAHTCNPGTLGGQGGWIT*VQLETSLGNM VKPPLY*KYKN*PGMVVCACNPSYSGG*GMKIA *TQEVEAAVS*DHPTALQPR*QRDCLKKINKYK* KF

Sequence MRPS11.jAug05

MRPS11.u.f.6 (forward primer)
MRPS11.u.r.10 (reverse primer)
Alternative acceptor

Frame 0

SPGTARTNHSHMEGVTHHLRTLKKGKNPLVNYS ESLIEHLNGNKNIQWT**RVDDFPFCPLPDRHSW YRRRRSCDCRCRRKLTGVNSSHAGCEKRGVAVP AVLDLAPDSRQGRGQNAGRDHLHRRSTAPRRCG QAES*TERGSQPHQVQGQGRWGVCMKIPSHSGKS PDVSEVSKSRNSIISTAVTHAVVAPEGLKRNGG GSHLRSSRGHRAVIF*PCVVFL*FLKSRDNFK* NLSSNC

Frame 1

VPELLERTIRIWRG*PTISEH*KRERIPW*TTV KVLLSI*MEIKIFSGPNEE*MTFPSVPSPTGTH GTGAGAAVTVAADGN*LGSIQVMQAVRNAGSRFL RSWTWPQTAGRVVARTPAGTICTGARQLQDAAA KQKVEQNAAPSHTKFRDKEDGEYA*KSLLIAES PQMCLKSASQETAS*AQQSHMRWWHQKD*KGMVG AAT*EAAGGTELLFFNHVLYFFDF*KVETILNK IFLLIA

Frame 2

SRNC*NEPFAYGGGDPPSQNIKKGKESPGELQ* KSY*AFKWK*KYSVDLMKSR*LSLLSPPRQALM VPAPAQL*LSLQTETDWGQFKSCRL*ETRGRGS CGPGLGPRQPAGSWPERRPGPSAQALDSSKTLRP SRKLNRTRLPATPSSGTRKMGSMHENPFS*RKV PRCV*SQQVKKQHHKHSSHTCGGGTRRTEKEWW GQPLKKQQGAQSCYFLTMCCISLIFKKSRQF*IK SFF*L