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Sequences

Sequence PIK3CD.bAug05

CTCGCGCCCAGCGCAGTCGCTCCGAGCGGCCGCGAGCAGAGCCGCCCAGCCCTGCCAGCTGCGCCGGGACGATAAGGAGTCAGGCCAGGGCGGGATGACA
CTCATTGATTCTAAAGCATCTTTAATCTGCCAGGCGGAGGGGGCTTTGCTGGTCTTTCTTGGACTATTCCAGAGAG
GACAACTGTCATCTGGGAAGTAAC
AACGC
AGGATGCCCCCTGGGGTGGACTGCCCCATGGAATTCTGGACCAAGGAGGAGAATCAGAGCGTTGTGGTTGACTTCCTGCTGCCCACAGGGGTCTA
CCTGAACTTCCCTGTGTCCCGCAATGCCAACCTCAGCACCATCAAGCAGCTGCTGTGGCACCGCGCCCAGTATGAGCCGCTCTTCCACATGCTCAGTGGC
CCCGAGGCCTATGTGTTCACCTGCATCAACCAGACAGCGGAGCAGCAAGAGCTGGAGGACGAGCAACGGCGTCTGTGTGACGTGCAGCCCTTCCTGCCCG
TCCTGCGCCTGGTGGCCCGTGAGGGCGACCGCGTGAAGAAGCTCATCAACTCACAGATCAGCCTCCTCATCGGCAAAGGCCTCCACGAGTTTGACTCCTT
GTGCGACCCAGAAGTGAACGACTTTCGCGCCAAGATGTGCCAATTCTGCGAGGAGGCGGCCGCCCGCCGGCAGCAGCTGGGCTGGGAGGCCTGGCTGCAG
TACAGTTTCCCCCTGCAGCTGGAGCCCTCGGCTCAAACCTGGGGGCCTGGTACCCTGCGGCTCCCGAACCGGGCCCTTCTGGTCAACGTTAAGTTTGAGG
GCAGCGAGGAGAGCTTCACCTTCCAGGTGTCCACCAAGGACGTGCCGCTGGCGCTGATGGCCTGTGCCCTGCGGAAGAAGGCCACAGTGTTCCGGCAGCC
GCTGGTGGAGCAGCCGGAAGACTACACGCTGCAGGTGAACGGCAGGCATGAGTACCTGTATGGCAGCTACCCGCTCTGCCAGTTCCAGTACATCTGCAGC
TGCCTGCACAGTGGGTTGACCCCTCACCTGACCATGGTCCATTCCTCCTCCATCCTCGCCATGCGGGATGAGCAGAGCAACCCTGCCCCCCAGGTCCAGA
AACCGCGTGCCAAACCACCTCCCATTCCTGCGAAGAAGCCTTCCTCTGTGTCCCTGTGGTCCCTGGAGCAGCCGTTCCGCATCGAGCTCATCCAGGGCAG
CAAAGTGAACGCCGACGAGCGGATGAAGCTGGTGGTGCAGGCCGGGCTTTTCCACGGCAACGAGATGCTGTGCAAGACGGTGTCCAGCTCGGAGGTGAGC
GTGTGCTCGGAGCCCGTGTGGAAGCAGCGGCTGGAGTTCGACATCAACATCTGCGACCTGCCCCGCATGGCCCGTCTCTGCTTTGCGCTGTACGCCGTGA
TCGAGAAAGCCAAGAAGGCTCGCTCCACCAAGAAGAAGTCCAAGAAGGCGGACTGCCCCATTGCCTGGGCCAACCTCATGCTGTTTGACTACAAGGACCA
GCTTAAGACCGGGGAACGCTGCCTCTACATGTGGCCCTCCGTCCCAGATGAGAAGGGCGAGCTGCTGAACCCCACGGGCACTGTGCGCAGTAACCCCAAC
ACGGATAGCGCCGCTGCCCTGCTCATCTGCCTGCCCGAGGTGGCCCCGCACCCCGTGTACTACCCCGCCCTGGAGAAGATCTTGGAGCTGGGGCGACACA
GCGAGTGTGTGCATGTCACCGAGGAGGAGCAGCTGCAGCTGCGGGAAATCCTGGAGCGGCGGGGGTCTGGGGAGCTGTATGAGCACGAGAAGGACCTGGT
GTGGAAGCTGCGGCATGAAGTCCAGGAGCACTTCCCGGAGGCGCTAGCCCGGCTGCTGCTGGTCACCAAGTGGAACAAGCATGAGGATGTGGCCCAGATG
CTCTACCTGCTGTGCTCCTGGCCGGAGCTGCCCGTCCTGAGCGCCCTGGAGCTGCTAGACTTCAGCTTCCCCGATTGCCACGTAGGCTCCTTCGCCATCA
AGTCGCTGCGGAAACTGACGGACGATGAGCTGTTCCAGTACCTGCTGCAGCTGGTGCAGGTGCTCAAGTACGAGTCCTACCTGGACTGCGAGCTGACCAA
ATTCCTGCTGGACCGGGCCCTGGCCAACCGCAAGATCGGCCACTTCCTTTTCTGGCACCTCCGCTCCGAGATGCACGTGCCGTCGGTGGCCCTGCGCTTC
GGCCTCATCCTGGAGGCCTACTGCAGGGGCAGCACCCACCACATGAAGGTGCTGATGAAGCAGGGGGAAGCACTGAGCAAACTGAAGGCCCTGAATGACT
TCGTCAAGCTGAGCTCTCAGAAGACCCCCAAGCCCCAGACCAAGGAGCTGATGCACTTGTGCATGCGGCAGGAGGCCTACCTAGAGGCCCTCTCCCACCT
GCAGTCCCCACTCGACCCCAGCACCCTGCTGGCTGAAGTCTGCGTGGAGCAGTGCACCTTCATGGACTCCAAGATGAAGCCCCTGTGGATCATGTACAGC
AACGAGGAGGCAGGCAGCGGCGGCAGCGTGGGCATCATCTTTAAGAACGGGGATGACCTCCGGCAGGACATGCTGACCCTGCAGATGATCCAGCTCATGG
ACGTCCTGTGGAAGCAGGAGGGGCTGGACCTGAGGATGACCCCCTATGGCTGCCTCCCCACCGGGGACCGCACAGGCCTCATTGAGGTGGTACTCCGTTC
AGACACCATCGCCAACATCCAACTCAACAAGAGCAACATGGCAGCCACAGCCGCCTTCAACAAGGATGCCCTGCTCAACTGGCTGAAGTCCAAGAACCCG
GGGGAGGCCCTGGATCGAGCCATTGAGGAGTTCACCCTCTCCTGTGCTGGCTATTGTGTGGCCACATATGTGCTGGGCATTGGCGATCGGCACAGCGACA
ACATCATGATCCGAGAGAGTGGGCAGCTGTTCCACATTGATTTTGGCCACTTTCTGGGGAATTTCAAGACCAAGTTTGGAATCAACCGCGAGCGTGTCCC
ATTCATCCTCACCTACGACTTTGTCCATGTGATTCAGCAGGGGAAGACTAATAATAGTGAGAAATTTGAACGGTTCCGGGGCTACTGTGAAAGGGCCTAC
ACCATCCTGCGGCGCCACGGGCTTCTCTTCCTCCACCTCTTTGCCCTGATGCGGGCGGCAGGCCTGCCTGAGCTCAGCTGCTCCAAAGACATCCAGTATC
TCAAGGACTCCCTGGCACTGGGGAAAACAGAGGAGGAGGCACTGAAGCACTTCCGAGTGAAGTTTAACGAAGCCCTCCGTGAGAGCTGGAAAACCAAAGT
GAACTGGCTGGCCCACAACGTGTCCAAAGACAACAGGCAGTAGTGGCTCCTCCCAGCCCTGGGCCCAAGAGGAGGCGGCTGCGGGTCGTGGGGACCAAGC
ACATTGGTCCTAAAGGGGCTGAAGAGCCTGAACTGCACCTAACGGGAAAGAACCGACATGGCTGCCTTTTGTTTACACTGGTTATTTATTTATGACTTGA
AATAGTTTAAGGAGCTAAACAGCCATAAACGGAAACGCCTCCTTCATGCAGCGGCGGTGCTGGGCCCCCCGAGGCTGCACCTGGCTCTCGGCTGAGGATT
GTCACCCCAAGTCTTCCAGCTGGTGGATCTGGGCCCAGCAAAGACTGTTCTCCTCCCGAGGGAACCTTCTTCCCAGGCCTCCCGCCAGACTGCCTGGGTC
CTGGCGCCTGGCGGTCACCTGGTGCCTACTGTCCGACAGGATGCCTTGATCCTCGTGCGACCCACCCTGTGTATCCTCCCTAGACTGAGTTCTGGCAGCT
CCCCGAGGCAGCCGGGGTACCCTCTAGATTCAGGGATGCTTGCTCTCCACTTTTCAAGTGGGTCTTGGGTACGAGAATTCCCTCATCTTTCTCTACTGTA
AAGTGATTTTGTTTGCAGGTAAGAAAATAATAGATGACTCACCACACCTCTACGGCTGGGGAGATCAGGCCCAGCCCCATAAAGGAGAATCTACGCTGGT
CCTCAGGACGTGTTAAAGAGATCTGGGCCTCATGTAGCTCACCCCGGTCACGCATGAAGGCAAAAGCAGGTCAGAAGCGAATACTCTGCCATTATCTCAA
AAATCTTTTTTTTTTTTTTGAGATGGGGTCTTCCTCTGTTGCCCAGGCTGGAGTGCAGTGGTGCAATCTTGGCTCACTGTAACCTCCGCCTCCCAGGTTC
AAGTGATTCTTCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGTGCACCACCGTACCCAGCTAATTTTTGTATTTTAGTAGAGACGGGGGTTTCAC
CATGTTGGCTGGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCCGCCTGAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCCGGC
CCACTCTGCCATTGTCTAAGCCACCTCTGAAAGCAGGTTTTAACAAAAGGATGAGGCCAGAACTCTTCCAGAACCATCACCTTTGGGAACCTGCTGTGAG
AGTGCTGAGGTACCAGAAGTGTGAGAACGAGGGGGCGTGCTGGGATCTTTCTCTCTGACTATACTTAGTTTGAAATGGTGCAGGCTTAGTCTTAAGCCTC
CAAAGGCCTGGATTTGAGCAGCTTTAGAAATGCAGGTTCTAGGGCTTCTCCCAGCCTTCAGAAGCCAACTAACTCTGCAGATGGGGCTAGGACTGTGGGC
TTTTAGCAGCCCACAGGTGATCCTAACATATCAGGCCATGGACTCAGGACCTGCCCGGTGATGCTGTTGATTTCTCAAAGGTCTTCCAAAACTCAACAGA
GCCAGAAGTAGCCGCCCGCTCAGCGGCTCAGGTGCCAGCTCTGTTCTGATTCACCAGGGGTCCGTCAGTAGTCATTGCCACCCGCGGGGCACCTCCCTGG
CCACACGCCTGTTCCCAGCAAGTGCTGAAACTCACTAGACCGTCTGCCTGTTTCGAAATGGGGAAAGCCGTGCGTGCGCGTTATTTATTTAAGTGCGCCT
GTGTGCGCGGGTGTGGGAGCACACTTTGCAAAGCCACAGCGTTTCTGGTTTTGGGTGTACAGTCTTGTGTGCCTGGCGAGAAGAATATTTTCTATTTTTT
TAAGTCATTTCATGTTTCTGTCTGGGGAAGGCAAGTTAGTTAAGTATCACTGATGTGGGTTGAGACCAGCACTCTGTGAAACCTTGAAATGAGAAGTAAA
GGCAGATGAAAAGAAAGAAAAAGCCTTTTTATGTTCTTTTATGTTCTCGGCTCAAAAAGAAACAAGGGAGTGTAGGTTTAAAACCAAAACAGGAGAGAAG
ACAAACCCCGCTCCGGCTGGAGTTAGTTAGAACCAGAACTTTATTGTAGCGGATACACTTTCTGACCTATCATGAGTATACACATCTGCGAAGGGAAACC
GCGCGGCGACAGCGTGAGGACATCCCCTGGGCGTGAGCGTCTGTCCGCTGTCTAAACAGAGCAGCTACAGGGACGGGACATGGAGGATGGCCACACATAG
CACAGCCACCAGTGTCCTCAGAACTAGCAGTCAGGGTCACAGAACAGTATTCAAAATGATTGCCCACCTGTTTTAGAAATCTAAAATTTTACATGTAACT
AAGAGCAAAGTGCTATGTGGGTTTTAGACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGGGCTCCTGGGGGAGAGGGATTTC
AACCCCCCTGATGGCAGGGGGTGCTCTGGGGAGGAGAGAGGAGAGAACAGGCTGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCT
GGACGTTCTGAGTACGGATCGCTCAGGCCTCCTGCCGTCTCCAAAAGGAGTGGTCAGCCGGTCTGCAGGACACCTCTCAGTTTCTCCTTTTACCAGCAGG
AAAATGTACATTTAAGCATAAACCACAAGGCTGCACACGGTGAGACCAGGCCACTGCCCAGGGAGCTGCTGTCGGAGGAGGAGTGTGGAAAAGGGGCCAG
GGACCCCGCACCCCACACCAAATTAGGAACAGGTAGAATCCCAAAGGCAAGGCCCGGCCACTTGTAGCTACCCTGATCCAGTCTCTTGAGCAGCACAGCT
AGAGGCCTGTGGCCCCCGACTCCCAGCCATACTCAGACCTGAGCAGGGGCTGGGGCGGGGCTGGGCGGGGTGGGCCTCTCCCTCTGGGGTCTGGGGAGGG
AGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTCACTTTACATTCCAGTCCCGGGTTACACTAGCACAAAGGACACAAGGAATCCGATTTAT
TTACAAAATATTAAAAAGTCAGTTAATCATCTACACAGTACCCCCCATCCTGCCATTATTTATACATGCACTAGTTTGGAAAAAATAAAAACTTTTTTTA
AAAAAAGAAAAAAATGATTACCGGGTGGGAGTGAGCATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGGGCCAGTGT
CCTCTCCCCGGGGGGAGACTCCAGACACAAACGCGGGGCCTGAGGCGCTGGGAGGCCCCTGTGCGAGCCGGATGGCGGCCAGAGAGGACGTGTCAGCTCC
TCGTGGGACTGAAGAGCGCGACCAGGCAGAGGGTGGGCGGGGAGCCTAGGGTCCTACACACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACA
CCTACTGGCCGAAATGACTTTGTACATCGTGGACCCTTGGGACTGGGAGAACGGATGGCAGCAGAGTCTTCGAAAGCAGAAACCGAGGTGGCCGGGGGCA
CGGGTCAGTAGCTGAGGGTGGAGTCATCCCACTCCAGCTGCTGCTGCCGGGTTGCGTTCTGGGGGTCGCCCTGCTCCCCCTCCTCCTCCTCGCTGCTCTC
CGACTCGGCGCTGGTGATGTCATCCTCTTCTTCGCCGTCCTCGCTTTCCTCTTCCTCTTCCTCTTCCTCCTCCTCCTCACTGCTGTGCTGGTCCTCATAG
G
  • PIK3CD.F1 (forward primer)
  • PIK3CD.R1 (reverse primer)
  • Mutually exclusive exon skipping

Frame 0

LAPSAVAPSGREQSRPALPAAPGR*GVRPGRDD
TH*F*SIFNLPGGGGFAGLSWTIPER
TTVIWEVT
T
QDAPWGGLPHGILDQGGESERCG*LPAAHRGL
PELPCVPQCQPQHHQAAAVAPRPV*AALPHAQW
PRGLCVHLHQPDSGAARAGGRATASV*RAALPAR
PAPGGP*GRPREEAHQLTDQPPHRQRPPRV*LL
VRPRSERLSRQDVPILRGGGRPPAAAGLGGLAA
VQFPPAAGALGSNLGAWYPAAPEPGPSGQR*V*G
QRGELHLPGVHQGRAAGADGLCPAEEGHSVPAA
AGGAAGRLHAAGERQA*VPVWQLPALPVPVHLQ
LPAQWVDPSPDHGPFLLHPRHAG*AEQPCPPGPE
TACQTTSHSCEEAFLCVPVVPGAAVPHRAHPGQ
QSERRRADEAGGAGRAFPRQRDAVQDGVQLGGE
RVLGARVEAAAGVRHQHLRPAPHGPSLLCAVRRD
RESQEGSLHQEEVQEGGLPHCLGQPHAV*LQGP
A*DRGTLPLHVALRPR*EGRAAEPHGHCAQ*PQ
HG*RRCPAHLPARGGPAPRVLPRPGEDLGAGATQ
RVCACHRGGAAAAAGNPGAAGVWGAV*AREGPG
VEAAA*SPGALPGGASPAAAGHQVEQA*GCGPD
ALPAVLLAGAARPERPGAARLQLPRLPRRLLRHQ
VAAETDGR*AVPVPAAAGAGAQVRVLPGLRADQ
IPAGPGPGQPQDRPLPFLAPPLRDARAVGGPAL
RPHPGGLLQGQHPPHEGADEAGGSTEQTEGPE*L
RQAELSEDPQAPDQGADALVHAAGGLPRGPLPP
AVPTRPQHPAG*SLRGAVHLHGLQDEAPVDHVQ
QRGGRQRRQRGHHL*ERG*PPAGHADPADDPAHG
RPVEAGGAGPEDDPLWLPPHRGPHRPH*GGTPF
RHHRQHPTQQEQHGSHSRLQQGCPAQLAEVQEP
GGGPGSSH*GVHPLLCWLLCGHICAGHWRSAQRQ
HHDPREWAAVPH*FWPLSGEFQDQVWNQPRACP
IHPHLRLCPCDSAGED****EI*TVPGLL*KGL
HHPAAPRASLPPPLCPDAGGRPA*AQLLQRHPVS
QGLPGTGENRGGGTEALPSEV*RSPP*ELENQS
ELAGPQRVQRQQAVVAPPSPGPKRRRLRVVGTK
HIGPKGAEEPELHLTGKNRHGCLLFTLVIYL*LE
IV*GAKQP*TETPPSCSGGAGPPEAAPGSRLRI
VTPSLPAGGSGPSKDCSPPEGTFFPGLPPDCLG
PGAWRSPGAYCPTGCLDPRATHPVYPP*TEFWQL
PEAAGVPSRFRDACSPLFKWVLGTRIPSSFSTV
K*FCLQVRK**MTHHTSTAGEIRPSPIKENLRW
SSGRVKEIWASCSSPRSRMKAKAGQKRILCHYLK
NLFFFFEMGSSSVAQAGVQWCNLGSL*PPPPRF
K*FFCLSLLSSWDYRCAPPYPANFCILVETGVS
PCWLGWSRTPDLR*STRLSLPKCWDYRHEPPRPA
HSAIV*ATSESRF*QKDEARTLPEPSPLGTCCE
SAEVPEV*ERGGVLGSFSLTILSLKWCRLSLKP
PKAWI*AALEMQVLGLLPAFRSQLTLQMGLGLWA
FSSPQVILTYQAMDSGPAR*CC*FLKGLPKLNR
ARSSRPLSGSGASSVLIHQGSVSSHCHPRGTSL
ATRLFPASAETH*TVCLFRNGESRACALFI*VRL
CARVWEHTLQSHSVSGFGCTVLCAWREEYFLFF
*VISCFCLGKAS*LSITDVG*DQHSVKP*NEK*
RQMKRKKKPFYVLLCSRLKKKQGSVGLKPKQERR
QTPLRLELVRTRTLL*RIHFLTYHEYTHLRRET
ARRQREDIPWA*ASVRCLNRAATGTGHGGWPHI
AQPPVSSELAVRVTEQYSK*LPTCFRNLKFYM*L
RAKCYVGFRP*LFVCSPALPPSKAAGLLGERDF
NPPDGRGCSGEERGENRLFWKIPAL*LRAMRLS
WTF*VRIAQASCRLQKEWSAGLQDTSQFLLLPAG
KCTFKHKPQGCTR*DQATAQGAAVGGGVWKRGQ
GPRTPHQIRNR*NPKGKARPLVATLIQSLEQHS
*RPVAPDSQPYSDLSRGWGGAGRGGPLPLGSGEG
GPGGKSPCSELRTSLYIPVPGYTSTKDTRNPIY
LQNIKKSVNHLHSTPHPAIIYTCTSLEKIKTFF
KKRKK*LPGGSEHVLPFVNEPSWHGFSGVRGASV
LSPGGDSRHKRGA*GAGRPLCEPDGGQRGRVSS
SWD*RARPGRGWAGSLGSYTPSTATIVAGRGLH
TYWPK*LCTSWTLGTGRTDGSRVFESRNRGGRGH
GSVAEGGVIPLQLLLPGCVLGVALLPLLLLAAL
RLGAGDVILFFAVLAFLFLFLFLLLLTAVLVLI

Frame 1

SRPAQSLRAAASRAAQPCQLRRDDKESGQGGMT
LIDSKASLICQAEGALLVFLGLFQR
GQLSSGK*
QR
RMPPGVDCPMEFWTKEENQSVVVDFLLPTGVY
LNFPVSRNANLSTIKQLLWHRAQYEPLFHMLSG
PEAYVFTCINQTAEQQELEDEQRRLCDVQPFLP
VLRLVAREGDRVKKLINSQISLLIGKGLHEFDSL
CDPEVNDFRAKMCQFCEEAAARRQQLGWEAWLQ
YSFPLQLEPSAQTWGPGTLRLPNRALLVNVKFE
GSEESFTFQVSTKDVPLALMACALRKKATVFRQP
LVEQPEDYTLQVNGRHEYLYGSYPLCQFQYICS
CLHSGLTPHLTMVHSSSILAMRDEQSNPAPQVQ
KPRAKPPPIPAKKPSSVSLWSLEQPFRIELIQGS
KVNADERMKLVVQAGLFHGNEMLCKTVSSSEVS
VCSEPVWKQRLEFDINICDLPRMARLCFALYAV
IEKAKKARSTKKKSKKADCPIAWANLMLFDYKDQ
LKTGERCLYMWPSVPDEKGELLNPTGTVRSNPN
TDSAAALLICLPEVAPHPVYYPALEKILELGRH
SECVHVTEEEQLQLREILERRGSGELYEHEKDLV
WKLRHEVQEHFPEALARLLLVTKWNKHEDVAQM
LYLLCSWPELPVLSALELLDFSFPDCHVGSFAI
KSLRKLTDDELFQYLLQLVQVLKYESYLDCELTK
FLLDRALANRKIGHFLFWHLRSEMHVPSVALRF
GLILEAYCRGSTHHMKVLMKQGEALSKLKALND
FVKLSSQKTPKPQTKELMHLCMRQEAYLEALSHL
QSPLDPSTLLAEVCVEQCTFMDSKMKPLWIMYS
NEEAGSGGSVGIIFKNGDDLRQDMLTLQMIQLM
DVLWKQEGLDLRMTPYGCLPTGDRTGLIEVVLRS
DTIANIQLNKSNMAATAAFNKDALLNWLKSKNP
GEALDRAIEEFTLSCAGYCVATYVLGIGDRHSD
NIMIRESGQLFHIDFGHFLGNFKTKFGINRERVP
FILTYDFVHVIQQGKTNNSEKFERFRGYCERAY
TILRRHGLLFLHLFALMRAAGLPELSCSKDIQY
LKDSLALGKTEEEALKHFRVKFNEALRESWKTKV
NWLAHNVSKDNRQ*WLLPALGPRGGGCGSWGPS
TLVLKGLKSLNCT*RERTDMAAFCLHWLFIYDL
K*FKELNSHKRKRLLHAAAVLGPPRLHLALG*GL
SPQVFQLVDLGPAKTVLLPREPSSQASRQTAWV
LAPGGHLVPTVRQDALILVRPTLCILPRLSSGS
SPRQPGYPLDSGMLALHFSSGSWVREFPHLSLL*
SDFVCR*ENNR*LTTPLRLGRSGPAP*RRIYAG
PQDVLKRSGPHVAHPGHA*RQKQVRSEYSAIIS
KIFFFFLRWGLPLLPRLECSGAILAHCNLRLPGS
SDSSASAS*VAGITGVHHRTQLIFVF**RRGFH
HVGWAGLELLTSGDPPA*ASQSAGITGMSHRAR
PTLPLSKPPLKAGFNKRMRPELFQNHHLWEPAVR
VLRYQKCENEGACWDLSL*LYLV*NGAGLVLSL
QRPGFEQL*KCRF*GFSQPSEAN*LCRWG*DCG
LLAAHR*S*HIRPWTQDLPGDAVDFSKVFQNSTE
PEVAARSAAQVPALF*FTRGPSVVIATRGAPPW
PHACSQQVLKLTRPSACFEMGKAVRARYLFKCA
CVRGCGSTLCKATAFLVLGVQSCVPGEKNIFYFF
KSFHVSVWGRQVS*VSLMWVETSTL*NLEMRSK
GR*KERKSLFMFFYVLGSKRNKGV*V*NQNRRE
DKPRSGWS*LEPELYCSGYTF*PIMSIHICEGKP
RGDSVRTSPGRERLSAV*TEQLQGRDMEDGHT*
HSHQCPQN*QSGSQNSIQNDCPPVLEI*NFTCN
*EQSAMWVLDHDCLFALLPYHQAKQQGSWGRGIS
TPLMAGGALGRREERTGCFGKFQHFDFGPCVSP
GRSEYGSLRPPAVSKRSGQPVCRTPLSFSFYQQ
ENVHLSINHKAAHGETRPLPRELLSEEECGKGAR
DPAPHTKLGTGRIPKARPGHL*LP*SSLLSSTA
RGLWPPTPSHTQT*AGAGAGLGGVGLSLWGLGR
EDPAGRARAQSSELHFTFQSRVTLAQRTQGIRFI
YKILKSQLIIYTVPPILPLFIHALVWKK*KLFL
KKEKNDYRVGVSMFYPLSTSPAGMAFLECEGPV
SSPRGETPDTNAGPEALGGPCASRMAAREDVSAP
RGTEERDQAEGGRGA*GPTHQAQRRSWRGGVCT
PTGRNDFVHRGPLGLGERMAAESSKAETEVAGG
TGQ*LRVESSHSSCCCRVAFWGSPCSPSSSSLLS
DSALVMSSSSSPSSLSSSSSSSSSSSLLCWSS*

Frame 2

RAQRSRSERPRAEPPSPASCAGTIRSQARAG*H
SLILKHL*SARRRGLCWSFLDYSRE
DNCHLGSN
NA
GCPLGWTAPWNSGPRRRIRALWLTSCCPQGS
T*TSLCPAMPTSAPSSSCCGTAPSMSRSSTCSVA
PRPMCSPASTRQRSSKSWRTSNGVCVTCSPSCP
SCAWWPVRATA*RSSSTHRSASSSAKASTSLTP
CATQK*TTFAPRCANSARRRPPAGSSWAGRPGCS
TVSPCSWSPRLKPGGLVPCGSRTGPFWSTLSLR
AARRASPSRCPPRTCRWR*WPVPCGRRPQCSGS
RWWSSRKTTRCR*TAGMSTCMAATRSASSSTSAA
ACTVG*PLT*PWSIPPPSSPCGMSRATLPPRSR
NRVPNHLPFLRRSLPLCPCGPWSSRSASSSSRA
AK*TPTSG*SWWCRPGFSTATRCCARRCPARR*A
CARSPCGSSGWSSTSTSATCPAWPVSALRCTP*
SRKPRRLAPPRRSPRRRTAPLPGPTSCCLTTRT
SLRPGNAASTCGPPSQMRRASC*TPRALCAVTPT
RIAPLPCSSACPRWPRTPCTTPPWRRSWSWGDT
ASVCMSPRRSSCSCGKSWSGGGLGSCMSTRRTW
CGSCGMKSRSTSRRR*PGCCWSPSGTSMRMWPRC
STCCAPGRSCPS*APWSC*TSASPIAT*APSPS
SRCGN*RTMSCSSTCCSWCRCSSTSPTWTAS*P
NSCWTGPWPTARSATSFSGTSAPRCTCRRWPCAS
ASSWRPTAGAAPTT*RC**SRGKH*AN*RP*MT
SSS*ALRRPPSPRPRS*CTCACGRRPT*RPSPT
CSPHSTPAPCWLKSAWSSAPSWTPR*SPCGSCTA
TRRQAAAAAWASSLRTGMTSGRTC*PCR*SSSW
TSCGSRRGWT*G*PPMAASPPGTAQASLRWYSV
QTPSPTSNSTRATWQPQPPSTRMPCSTG*SPRTR
GRPWIEPLRSSPSPVLAIVWPHMCWALAIGTAT
TS*SERVGSCSTLILATFWGISRPSLESTASVS
HSSSPTTLSM*FSRGRLIIVRNLNGSGATVKGPT
PSCGATGFSSSTSLP*CGRQACLSSAAPKTSSI
SRTPWHWGKQRRRH*STSE*SLTKPSVRAGKPK
*TGWPTTCPKTTGSSGSSQPWAQEEAAAGRGDQA
HWS*RG*RA*TAPNGKEPTWLPFVYTGYLFMT*
NSLRS*TAINGNASFMQRRCWAPRGCTWLSAED
CHPKSSSWWIWAQQRLFSSRGNLLPRPPARLPGS
WRLAVTWCLLSDRMP*SSCDPPCVSSLD*VLAA
PRGSRGTL*IQGCLLSTFQVGLGYENSLIFLYC
KVILFAGKKIIDDSPHLYGWGDQAQPHKGESTLV
LRTC*RDLGLM*LTPVTHEGKSRSEANTLPLSQ
KSFFFF*DGVFLCCPGWSAVVQSWLTVTSASQV
QVILLPQPPE*LGLQVCTTVPS*FLYFSRDGGFT
MLAGLVSNS*PQVIHPPEPPKVLGLQA*ATAPG
PLCHCLSHL*KQVLTKG*GQNSSRTITFGNLL*
EC*GTRSVRTRGRAGIFLSDYT*FEMVQA*S*AS
KGLDLSSFRNAGSRASPSLQKPTNSADGARTVG
F*QPTGDPNISGHGLRTCPVMLLISQRSSKTQQ
SQK*PPAQRLRCQLCSDSPGVRQ*SLPPAGHLPG
HTPVPSKC*NSLDRLPVSKWGKPCVRVIYLSAP
VCAGVGAHFAKPQRFWFWVYSLVCLARRIFSIF
LSHFMFLSGEGKLVKYH*CGLRPALCETLK*EVK
ADEKKEKAFLCSFMFSAQKETRECRFKTKTGEK
TNPAPAGVS*NQNFIVADTLSDLS*VYTSAKGN
RAATA*GHPLGVSVCPLSKQSSYRDGTWRMATHS
TATSVLRTSSQGHRTVFKMIAHLF*KSKILHVT
KSKVLCGF*TMTVCLLSCPTTKQSSRAPGGEGF
QPP*WQGVLWGGERREQAVLENSSTLTSGHASLL
DVLSTDRSGLLPSPKGVVSRSAGHLSVSPFTSR
KMYI*A*TTRLHTVRPGHCPGSCCRRRSVEKGP
GTPHPTPN*EQVESQRQGPATCSYPDPVS*AAQL
EACGPRLPAILRPEQGLGRGWAGWASPSGVWGG
RTRREEPVLRAPNFTLHSSPGLH*HKGHKESDL
FTKY*KVS*SSTQYPPSCHYLYMH*FGKNKNFF*
KKKKMITGWE*ACFTLCQRAQLAWLFWSARGQC
PLPGGRLQTQTRGLRRWEAPVRAGWRPERTCQL
LVGLKSATRQRVGGEPRVLHTKHSDDRGGEGSAH
LLAEMTLYIVDPWDWENGWQQSLRKQKPRWPGA
RVSS*GWSHPTPAAAAGLRSGGRPAPPPPPRCS
PTRRW*CHPLLRRPRFPLPLPLPPPPHCCAGPHR

Sequence PIK3CD.fAug05

CTCGCGCCCAGCGCAGTCGCTCCGAGCGGCCGCGAGCAGAGCCGCCCAGCCCTGCCAGCTGCGCCGGGACGCTGGTGGCCATGACTGGCTTTCGTGGATG
TGTATGTTCCTGAGGAAAGATGATTTGCTGTGCGTGCTCCTGTGGGGAGGACATGCAGTGTCTGCCTGGGAGAAGAGGCAGCTGAGGCCGTGGCCCGGAG
TAGTAGGAGCCACAAGCCACCCTGGGCAGGACGAGGCCCTGAGGGAG
GACAACTGTCATCTGGGAAGTAACAACGCAGGATGCCCCCTGGGGTGGACTGC
CCCATGGAATTCTGGACCAAGGAGGAGAATCAGAGCGTTGTGGTTGACTTCCTGCTGCCCACAGGGGTCTACCTGAACTTCCCTGTGTCCCGCAATGCCA
ACCTCAGCACCATCAAGCAGCTGCTGTGGCACCGCGCCCAGTATGAGCCGCTCTTCCACATGCTCAGTGGCCCCGAGGCCTATGTGTTCACCTGCATCAA
CCAGACAGCGGAGCAGCAAGAGCTGGAGGACGAGCAACGGCGTCTGTGTGACGTGCAGCCCTTCCTGCCCGTCCTGCGCCTGGTGGCCCGTGAGGGCGAC
CGCGTGAAGAAGCTCATCAACTCACAGATCAGCCTCCTGAGTAGCTGGGATTACAGGTGTGCACCACCGTACCCAGCTAATTTTTGTATTTTAGTAGAGA
CGGGGGTTTCACCATGTTGGCTGGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCCGCCTGAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCC
ACCGCGCCCGGCCCACTCTGCCATTGTCTAAGCCACCTCTGAAAGCAGGTTTTAACAAAAGGATGAGGCCAGAACTCTTCCAGAACCATCACCTTTGGGA
ACCTGCTGTGAGAGTGCTGAGGTACCAGAAGTGTGAGAACGAGGGGGCGTGCTGGGATCTTTCTCTCTGACTATACTTAGTTTGAAATGGTGCAGGCTTA
GTCTTAAGCCTCCAAAGGCCTGGATTTGAGCAGCTTTAGAAATGCAGGTTCTAGGGCTTCTCCCAGCCTTCAGAAGCCAACTAACTCTGCAGATGGGGCT
AGGACTGTGGGCTTTTAGCAGCCCACAGGTGATCCTAACATATCAGGCCATGGACTCAGGACCTGCCCGGTGATGCTGTTGATTTCTCAAAGGTCTTCCA
AAACTCAACAGAGCCAGAAGTAGCCGCCCGCTCAGCGGCTCAGGTGCCAGCTCTGTTCTGATTCACCAGGGGTCCGTCAGTAGTCATTGCCACCCGCGGG
GCACCTCCCTGGCCACACGCCTGTTCCCAGCAAGTGCTGAAACTCACTAGACCGTCTGCCTGTTTCGAAATGGGGAAAGCCGTGCGTGCGCGTTATTTAT
TTAAGTGCGCCTGTGTGCGCGGGTGTGGGAGCACACTTTGCAAAGCCACAGCGTTTCTGGTTTTGGGTGTACAGTCTTGTGTGCCTGGCGAGAAGAATAT
TTTCTATTTTTTTAAGTCATTTCATGTTTCTGTCTGGGGAAGGCAAGTTAGTTAAGTATCACTGATGTGGGTTGAGACCAGCACTCTGTGAAACCTTGAA
ATGAGAAGTAAAGGCAGATGAAAAGAAAGAAAAAGCCTTTTTATGTTCTTTTATGTTCTCGGCTCAAAAAGAAACAAGGGAGTGTAGGTTTAAAACCAAA
ACAGGAGAGAAGACAAACCCCGCTCCGGCTGGAGTTAGTTAGAACCAGAACTTTATTGTAGCGGATACACTTTCTGACCTATCATGAGTATACACATCTG
CGAAGGGAAACCGCGCGGCGACAGCGTGAGGACATCCCCTGGGCGTGAGCGTCTGTCCGCTGTCTAAACAGAGCAGCTACAGGGACGGGACATGGAGGAT
GGCCACACATAGCACAGCCACCAGTGTCCTCAGAACTAGCAGTCAGGGTCACAGAACAGTATTCAAAATGATTGCCCACCTGTTTTAGAAATCTAAAATT
TTACATGTAACTAAGAGCAAAGTGCTATGTGGGTTTTAGACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGGGCTCCTGGGG
GAGAGGGATTTCAACCCCCCTGATGGCAGGGGGTGCTCTGGGGAGGAGAGAGGAGAGAACAGGCTGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCA
TGCGTCTCTCCTGGACGTTCTGAGTACGGATCGCTCAGGCCTCCTGCCGTCTCCAAAAGGAGTGGTCAGCCGGTCTGCAGGACACCTCTCAGTTTCTCCT
TTTACCAGCAGGAAAATGTACATTTAAGCATAAACCACAAGGCTGCACACGGTGAGACCAGGCCACTGCCCAGGGAGCTGCTGTCGGAGGAGGAGTGTGG
AAAAGGGGCCAGGGACCCCGCACCCCACACCAAATTAGGAACAGGTAGAATCCCAAAGGCAAGGCCCGGCCACTTGTAGCTACCCTGATCCAGTCTCTTG
AGCAGCACAGCTAGAGGCCTGTGGCCCCCGACTCCCAGCCATACTCAGACCTGAGCAGGGGCTGGGGCGGGGCTGGGCGGGGTGGGCCTCTCCCTCTGGG
GTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTCACTTTACATTCCAGTCCCGGGTTACACTAGCACAAAGGACACAAGG
AATCCGATTTATTTACAAAATATTAAAAAGTCAGTTAATCATCTACACAGTACCCCCCATCCTGCCATTATTTATACATGCACTAGTTTGGAAAAAATAA
AAACTTTTTTTAAAAAAAGAAAAAAATGATTACCGGGTGGGAGTGAGCATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCG
AGGGGCCAGTGTCCTCTCCCCGGGGGGAGACTCCAGACACAAACGCGGGGCCTGAGGCGCTGGGAGGCCCCTGTGCGAGCCGGATGGCGGCCAGAGAGGA
CGTGTCAGCTCCTCGTGGGACTGAAGAGCGCGACCAGGCAGAGGGTGGGCGGGGAGCCTAGGGTCCTACACACCAAGCACAGCGACGATCGTGGCGGGGA
GGGGTCTGCACACCTACTGGCCGAAATGACTTTGTACATCGTGGACCCTTGGGACTGGGAGAACGGATGGCAGCAGAGTCTTCGAAAGCAGAAACCGAGG
TGGCCGGGGGCACGGGTCAGTAGCTGAGGGTGGAGTCATCCCACTCCAGCTGCTGCTGCCGGGTTGCGTTCTGGGGGTCGCCCTGCTCCCCCTCCTCCTC
CTCGCTGCTCTCCGACTCGGCGCTGGTGATGTCATCCTCTTCTTCGCCGTCCTCGCTTTCCTCTTCCTCTTCCTCTTCCTCCTCCTCCTCACTGCTGTGC
TGGTCCTCATAGG
  • PIK3CD.F1 (forward primer)
  • PIK3CD.R1 (reverse primer)
  • Mutually exclusive exon skipping

Frame 0

LAPSAVAPSGREQSRPALPAAPGRWWP*LAFVD
VYVPEER*FAVRAPVGRTCSVCLGEEAAEAVARS
SRSHKPPWAGRGPEG
GQLSSGK*QRRMPPGVDC
PMEFWTKEENQSVVVDFLLPTGVYLNFPVSRNA
NLSTIKQLLWHRAQYEPLFHMLSGPEAYVFTCIN
QTAEQQELEDEQRRLCDVQPFLPVLRLVAREGD
RVKKLINSQISLLSSWDYRCAPPYPANFCILVE
TGVSPCWLGWSRTPDLR*STRLSLPKCWDYRHEP
PRPAHSAIV*ATSESRF*QKDEARTLPEPSPLG
TCCESAEVPEV*ERGGVLGSFSLTILSLKWCRL
SLKPPKAWI*AALEMQVLGLLPAFRSQLTLQMGL
GLWAFSSPQVILTYQAMDSGPAR*CC*FLKGLP
KLNRARSSRPLSGSGASSVLIHQGSVSSHCHPR
GTSLATRLFPASAETH*TVCLFRNGESRACALFI
*VRLCARVWEHTLQSHSVSGFGCTVLCAWREEY
FLFF*VISCFCLGKAS*LSITDVG*DQHSVKP*
NEK*RQMKRKKKPFYVLLCSRLKKKQGSVGLKPK
QERRQTPLRLELVRTRTLL*RIHFLTYHEYTHL
RRETARRQREDIPWA*ASVRCLNRAATGTGHGG
WPHIAQPPVSSELAVRVTEQYSK*LPTCFRNLKF
YM*LRAKCYVGFRP*LFVCSPALPPSKAAGLLG
ERDFNPPDGRGCSGEERGENRLFWKIPAL*LRA
MRLSWTF*VRIAQASCRLQKEWSAGLQDTSQFLL
LPAGKCTFKHKPQGCTR*DQATAQGAAVGGGVW
KRGQGPRTPHQIRNR*NPKGKARPLVATLIQSL
EQHS*RPVAPDSQPYSDLSRGWGGAGRGGPLPLG
SGEGGPGGKSPCSELRTSLYIPVPGYTSTKDTR
NPIYLQNIKKSVNHLHSTPHPAIIYTCTSLEKI
KTFFKKRKK*LPGGSEHVLPFVNEPSWHGFSGVR
GASVLSPGGDSRHKRGA*GAGRPLCEPDGGQRG
RVSSSWD*RARPGRGWAGSLGSYTPSTATIVAG
RGLHTYWPK*LCTSWTLGTGRTDGSRVFESRNRG
GRGHGSVAEGGVIPLQLLLPGCVLGVALLPLLL
LAALRLGAGDVILFFAVLAFLFLFLFLLLLTAV
LVLI

Frame 1

SRPAQSLRAAASRAAQPCQLRRDAGGHDWLSWM
CMFLRKDDLLCVLLWGGHAVSAWEKRQLRPWPG
VVGATSHPGQDEALRE
DNCHLGSNNAGCPLGWTA
PWNSGPRRRIRALWLTSCCPQGST*TSLCPAMP
TSAPSSSCCGTAPSMSRSSTCSVAPRPMCSPAS
TRQRSSKSWRTSNGVCVTCSPSCPSCAWWPVRAT
A*RSSSTHRSAS*VAGITGVHHRTQLIFVF**R
RGFHHVGWAGLELLTSGDPPA*ASQSAGITGMS
HRARPTLPLSKPPLKAGFNKRMRPELFQNHHLWE
PAVRVLRYQKCENEGACWDLSL*LYLV*NGAGL
VLSLQRPGFEQL*KCRF*GFSQPSEAN*LCRWG
*DCGLLAAHR*S*HIRPWTQDLPGDAVDFSKVFQ
NSTEPEVAARSAAQVPALF*FTRGPSVVIATRG
APPWPHACSQQVLKLTRPSACFEMGKAVRARYL
FKCACVRGCGSTLCKATAFLVLGVQSCVPGEKNI
FYFFKSFHVSVWGRQVS*VSLMWVETSTL*NLE
MRSKGR*KERKSLFMFFYVLGSKRNKGV*V*NQ
NRREDKPRSGWS*LEPELYCSGYTF*PIMSIHIC
EGKPRGDSVRTSPGRERLSAV*TEQLQGRDMED
GHT*HSHQCPQN*QSGSQNSIQNDCPPVLEI*N
FTCN*EQSAMWVLDHDCLFALLPYHQAKQQGSWG
RGISTPLMAGGALGRREERTGCFGKFQHFDFGP
CVSPGRSEYGSLRPPAVSKRSGQPVCRTPLSFS
FYQQENVHLSINHKAAHGETRPLPRELLSEEECG
KGARDPAPHTKLGTGRIPKARPGHL*LP*SSLL
SSTARGLWPPTPSHTQT*AGAGAGLGGVGLSLW
GLGREDPAGRARAQSSELHFTFQSRVTLAQRTQG
IRFIYKILKSQLIIYTVPPILPLFIHALVWKK*
KLFLKKEKNDYRVGVSMFYPLSTSPAGMAFLEC
EGPVSSPRGETPDTNAGPEALGGPCASRMAARED
VSAPRGTEERDQAEGGRGA*GPTHQAQRRSWRG
GVCTPTGRNDFVHRGPLGLGERMAAESSKAETE
VAGGTGQ*LRVESSHSSCCCRVAFWGSPCSPSSS
SLLSDSALVMSSSSSPSSLSSSSSSSSSSSLLC
WSS*

Frame 2

RAQRSRSERPRAEPPSPASCAGTLVAMTGFRGC
VCS*GKMICCACSCGEDMQCLPGRRGS*GRGPE
**EPQATLGRTRP*GR
TTVIWEVTTQDAPWGGL
PHGILDQGGESERCG*LPAAHRGLPELPCVPQCQ
PQHHQAAAVAPRPV*AALPHAQWPRGLCVHLHQ
PDSGAARAGGRATASV*RAALPARPAPGGP*GR
PREEAHQLTDQPPE*LGLQVCTTVPS*FLYFSRD
GGFTMLAGLVSNS*PQVIHPPEPPKVLGLQA*A
TAPGPLCHCLSHL*KQVLTKG*GQNSSRTITFG
NLL*EC*GTRSVRTRGRAGIFLSDYT*FEMVQA*
S*ASKGLDLSSFRNAGSRASPSLQKPTNSADGA
RTVGF*QPTGDPNISGHGLRTCPVMLLISQRSS
KTQQSQK*PPAQRLRCQLCSDSPGVRQ*SLPPAG
HLPGHTPVPSKC*NSLDRLPVSKWGKPCVRVIY
LSAPVCAGVGAHFAKPQRFWFWVYSLVCLARRI
FSIFLSHFMFLSGEGKLVKYH*CGLRPALCETLK
*EVKADEKKEKAFLCSFMFSAQKETRECRFKTK
TGEKTNPAPAGVS*NQNFIVADTLSDLS*VYTS
AKGNRAATA*GHPLGVSVCPLSKQSSYRDGTWRM
ATHSTATSVLRTSSQGHRTVFKMIAHLF*KSKI
LHVTKSKVLCGF*TMTVCLLSCPTTKQSSRAPG
GEGFQPP*WQGVLWGGERREQAVLENSSTLTSGH
ASLLDVLSTDRSGLLPSPKGVVSRSAGHLSVSP
FTSRKMYI*A*TTRLHTVRPGHCPGSCCRRRSV
EKGPGTPHPTPN*EQVESQRQGPATCSYPDPVS*
AAQLEACGPRLPAILRPEQGLGRGWAGWASPSG
VWGGRTRREEPVLRAPNFTLHSSPGLH*HKGHK
ESDLFTKY*KVS*SSTQYPPSCHYLYMH*FGKNK
NFF*KKKKMITGWE*ACFTLCQRAQLAWLFWSA
RGQCPLPGGRLQTQTRGLRRWEAPVRAGWRPER
TCQLLVGLKSATRQRVGGEPRVLHTKHSDDRGGE
GSAHLLAEMTLYIVDPWDWENGWQQSLRKQKPR
WPGARVSS*GWSHPTPAAAAGLRSGGRPAPPPP
PRCSPTRRW*CHPLLRRPRFPLPLPLPPPPHCCA
GPHR

Sequence PIK3CD.eAug05

CTCGCGCCCAGCGCAGTCGCTCCGAGCGGCCGCGAGCAGAGCCGCCCAGCCCTGCCAGCTGCGCCGGGACGCTGGTGGCCATGACTGGCTTTCGTGGATG
TGTATGTTCCTGAGGAAAGATGATTTGCTGTGCGTGCTCCTGTGGGGAGGACATGCAGTGTCTGCCTGGGAGAAGAGGCAGCTGAGGCCGTGGCCCGGAG
TAGTAGGAGCCACAAGCCACCCTGGGCAGGACGAGGCCCTGAGGGAG
GACAACTGTCATCTGGGAAGTAACAACGCAGGATGCCCCCTGGGGTGGACTGC
CCCATGGAATTCTGGACCAAGGAGGAGAATCAGAGCGTTGTGGTTGACTTCCTGCTGCCCACAGGGGTCTACCTGAACTTCCCTGTGTCCCGCAATGCCA
ACCTCAGCACCATCAAGCAGCTGCTGTGGCACCGCGCCCAGTATGAGCCGCTCTTCCACATGCTCAGTGGCCCCGAGGCCTATGTGTTCACCTGCATCAA
CCAGACAGCGGAGCAGCAAGAGCTGGAGGACGAGCAACGGCGTCTGTGTGACGTGCAGCCCTTCCTGCCCGTCCTGCGCCTGGTGGCCCGTGAGGGCGAC
CGCGTGAAGAAGCTCATCAACTCACAGATCAGCCTCCTGAGTAGCTGGGATTACAGGTGTGCACCACCGTACCCAGCTAATTTTTGTATTTTAGTAGAGA
CGGGGGTTTCACCATGTTGGCTGGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCCGCCTGAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCC
ACCGCGCCCGGCCCACTCTGCCATTGTCTAAGCCACCTCTGAAAGCAGGTTTTAACAAAAGGATGAGGCCAGAACTCTTCCAGAACCATCACCTTTGGGA
ACCTGCTGTGAGAGTGCTGAGGTACCAGAAGTGTGAGAACGAGGGGGCGTGCTGGGATCTTTCTCTCTGACTATACTTAGTTTGAAATGGTGCAGGCTTA
GTCTTAAGCCTCCAAAGGCCTGGATTTGAGCAGCTTTAGAAATGCAGGTTCTAGGGCTTCTCCCAGCCTTCAGAAGCCAACTAACTCTGCAGATGGGGCT
AGGACTGTGGGCTTTTAGCAGCCCACAGGTGATCCTAACATATCAGGCCATGGACTCAGGACCTGCCCGGTGATGCTGTTGATTTCTCAAAGGTCTTCCA
AAACTCAACAGAGCCAGAAGTAGCCGCCCGCTCAGCGGCTCAGGTGCCAGCTCTGTTCTGATTCACCAGGGGTCCGTCAGTAGTCATTGCCACCCGCGGG
GCACCTCCCTGGCCACACGCCTGTTCCCAGCAAGTGCTGAAACTCACTAGACCGTCTGCCTGTTTCGAAATGGGGAAAGCCGTGCGTGCGCGTTATTTAT
TTAAGTGCGCCTGTGTGCGCGGGTGTGGGAGCACACTTTGCAAAGCCACAGCGTTTCTGGTTTTGGGTGTACAGTCTTGTGTGCCTGGCGAGAAGAATAT
TTTCTATTTTTTTAAGTCATTTCATGTTTCTGTCTGGGGAAGGCAAGTTAGTTAAGTATCACTGATGTGGGTTGAGACCAGCACTCTGTGAAACCTTGAA
ATGAGAAGTAAAGGCAGATGAAAAGAAAGAAAAAGCCTTTTTATGTTCTTTTATGTTCTCGGCTCAAAAAGAAACAAGGGAGTGTAGGTTTAAAACCAAA
ACAGGAGAGAAGACAAACCCCGCTCCGGCTGGAGTTAGTTAGAACCAGAACTTTATTGTAGCGGATACACTTTCTGACCTATCATGAGTATACACATCTG
CGAAGGGAAACCGCGCGGCGACAGCGTGAGGACATCCCCTGGGCGTGAGCGTCTGTCCGCTGTCTAAACAGAGCAGCTACAGGGACGGGACATGGAGGAT
GGCCACACATAGCACAGCCACCAGTGTCCTCAGAACTAGCAGTCAGGGTCACAGAACAGTATTCAAAATGATTGCCCACCTGTTTTAGAAATCTAAAATT
TTACATGTAACTAAGAGCAAAGTGCTATGTGGGTTTTAGACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGGGCTCCTGGGG
GAGAGGGATTTCAACCCCCCTGATGGCAGGGGGTGCTCTGGGGAGGAGAGAGGAGAGAACAGGCTGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCA
TGCGTCTCTCCTGGACGTTCTGAGTACGGATCGCTCAGGCCTCCTGCCGTCTCCAAAAGGAGTGGTCAGCCGGTCTGCAGGACACCTCTCAGTTTCTCCT
TTTACCAGCAGGAAAATGTACATTTAAGCATAAACCACAAGGCTGCACACGGTGAGACCAGGCCACTGCCCAGGGAGCTGCTGTCGGAGGAGGAGTGTGG
AAAAGGGGCCAGGGACCCCGCACCCCACACCAAATTAGGAACAGGTAGAATCCCAAAGGCAAGGCCCGGCCACTTGTAGCTACCCTGATCCAGTCTCTTG
AGCAGCACAGCTAGAGGCCTGTGGCCCCCGACTCCCAGCCATACTCAGACCTGAGCAGGGGCTGGGGCGGGGCTGGGCGGGGTGGGCCTCTCCCTCTGGG
GTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTCACTTTACATTCCAGTCCCGGGTTACACTAGCACAAAGGACACAAGG
AATCCGATTTATTTACAAAATATTAAAAAGTCAGTTAATCATCTACACAGTACCCCCCATCCTGCCATTATTTATACATGCACTAGTTTGGAAAAAATAA
AAACTTTTTTTAAAAAAAGAAAAAAATGATTACCGGGTGGGAGTGAGCATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCG
AGGGGCCAGTGTCCTCTCCCCGGGGGGAGACTCCAGACACAAACGCGGGGCCTGAGGCGCTGGGAGGCCCCTGTGCGAGCCGGATGGCGGCCAGAGAGGA
CGTGTCAGCTCCTCGTGGGACTGAAGAGCGCGACCAGGCAGAGGGTGGGCGGGGAGCCTAGGGTCCTACACACCAAGCACAGCGACGATCGTGGCGGGGA
GGGGTCTGCACACCTACTGGCCGAAATGACTTTGTACATCGTGGACCCTTGGGACTGGGAGAACGGATGGCAGCAGAGTCTTCGAAAGCAGAAACCGAGG
TGGCCGGGGGCACGGGTCAGTAGCTGAGGGTGGAGTCATCCCACTCCAGCTGCTGCTGCCGGGTTGCGTTCTGGGGGTCGCCCTGCTCCCCCTCCTCCTC
CTCGCTGCTCTCCGACTCGGCGCTGGTGATGTCATCCTCTTCTTCGCCGTCCTCGCTTTCCTCTTCCTCTTCCTCTTCCTCCTCCTCCTCACTGCTGTGC
TGGTCCTCATAGG
  • PIK3CD.F1 (forward primer)
  • PIK3CD.R1 (reverse primer)
  • Mutually exclusive exon skipping

Frame 0

LAPSAVAPSGREQSRPALPAAPGRWWP*LAFVD
VYVPEER*FAVRAPVGRTCSVCLGEEAAEAVARS
SRSHKPPWAGRGPEG
GQLSSGK*QRRMPPGVDC
PMEFWTKEENQSVVVDFLLPTGVYLNFPVSRNA
NLSTIKQLLWHRAQYEPLFHMLSGPEAYVFTCIN
QTAEQQELEDEQRRLCDVQPFLPVLRLVAREGD
RVKKLINSQISLLSSWDYRCAPPYPANFCILVE
TGVSPCWLGWSRTPDLR*STRLSLPKCWDYRHEP
PRPAHSAIV*ATSESRF*QKDEARTLPEPSPLG
TCCESAEVPEV*ERGGVLGSFSLTILSLKWCRL
SLKPPKAWI*AALEMQVLGLLPAFRSQLTLQMGL
GLWAFSSPQVILTYQAMDSGPAR*CC*FLKGLP
KLNRARSSRPLSGSGASSVLIHQGSVSSHCHPR
GTSLATRLFPASAETH*TVCLFRNGESRACALFI
*VRLCARVWEHTLQSHSVSGFGCTVLCAWREEY
FLFF*VISCFCLGKAS*LSITDVG*DQHSVKP*
NEK*RQMKRKKKPFYVLLCSRLKKKQGSVGLKPK
QERRQTPLRLELVRTRTLL*RIHFLTYHEYTHL
RRETARRQREDIPWA*ASVRCLNRAATGTGHGG
WPHIAQPPVSSELAVRVTEQYSK*LPTCFRNLKF
YM*LRAKCYVGFRP*LFVCSPALPPSKAAGLLG
ERDFNPPDGRGCSGEERGENRLFWKIPAL*LRA
MRLSWTF*VRIAQASCRLQKEWSAGLQDTSQFLL
LPAGKCTFKHKPQGCTR*DQATAQGAAVGGGVW
KRGQGPRTPHQIRNR*NPKGKARPLVATLIQSL
EQHS*RPVAPDSQPYSDLSRGWGGAGRGGPLPLG
SGEGGPGGKSPCSELRTSLYIPVPGYTSTKDTR
NPIYLQNIKKSVNHLHSTPHPAIIYTCTSLEKI
KTFFKKRKK*LPGGSEHVLPFVNEPSWHGFSGVR
GASVLSPGGDSRHKRGA*GAGRPLCEPDGGQRG
RVSSSWD*RARPGRGWAGSLGSYTPSTATIVAG
RGLHTYWPK*LCTSWTLGTGRTDGSRVFESRNRG
GRGHGSVAEGGVIPLQLLLPGCVLGVALLPLLL
LAALRLGAGDVILFFAVLAFLFLFLFLLLLTAV
LVLI

Frame 1

SRPAQSLRAAASRAAQPCQLRRDAGGHDWLSWM
CMFLRKDDLLCVLLWGGHAVSAWEKRQLRPWPG
VVGATSHPGQDEALRE
DNCHLGSNNAGCPLGWTA
PWNSGPRRRIRALWLTSCCPQGST*TSLCPAMP
TSAPSSSCCGTAPSMSRSSTCSVAPRPMCSPAS
TRQRSSKSWRTSNGVCVTCSPSCPSCAWWPVRAT
A*RSSSTHRSAS*VAGITGVHHRTQLIFVF**R
RGFHHVGWAGLELLTSGDPPA*ASQSAGITGMS
HRARPTLPLSKPPLKAGFNKRMRPELFQNHHLWE
PAVRVLRYQKCENEGACWDLSL*LYLV*NGAGL
VLSLQRPGFEQL*KCRF*GFSQPSEAN*LCRWG
*DCGLLAAHR*S*HIRPWTQDLPGDAVDFSKVFQ
NSTEPEVAARSAAQVPALF*FTRGPSVVIATRG
APPWPHACSQQVLKLTRPSACFEMGKAVRARYL
FKCACVRGCGSTLCKATAFLVLGVQSCVPGEKNI
FYFFKSFHVSVWGRQVS*VSLMWVETSTL*NLE
MRSKGR*KERKSLFMFFYVLGSKRNKGV*V*NQ
NRREDKPRSGWS*LEPELYCSGYTF*PIMSIHIC
EGKPRGDSVRTSPGRERLSAV*TEQLQGRDMED
GHT*HSHQCPQN*QSGSQNSIQNDCPPVLEI*N
FTCN*EQSAMWVLDHDCLFALLPYHQAKQQGSWG
RGISTPLMAGGALGRREERTGCFGKFQHFDFGP
CVSPGRSEYGSLRPPAVSKRSGQPVCRTPLSFS
FYQQENVHLSINHKAAHGETRPLPRELLSEEECG
KGARDPAPHTKLGTGRIPKARPGHL*LP*SSLL
SSTARGLWPPTPSHTQT*AGAGAGLGGVGLSLW
GLGREDPAGRARAQSSELHFTFQSRVTLAQRTQG
IRFIYKILKSQLIIYTVPPILPLFIHALVWKK*
KLFLKKEKNDYRVGVSMFYPLSTSPAGMAFLEC
EGPVSSPRGETPDTNAGPEALGGPCASRMAARED
VSAPRGTEERDQAEGGRGA*GPTHQAQRRSWRG
GVCTPTGRNDFVHRGPLGLGERMAAESSKAETE
VAGGTGQ*LRVESSHSSCCCRVAFWGSPCSPSSS
SLLSDSALVMSSSSSPSSLSSSSSSSSSSSLLC
WSS*

Frame 2

RAQRSRSERPRAEPPSPASCAGTLVAMTGFRGC
VCS*GKMICCACSCGEDMQCLPGRRGS*GRGPE
**EPQATLGRTRP*GR
TTVIWEVTTQDAPWGGL
PHGILDQGGESERCG*LPAAHRGLPELPCVPQCQ
PQHHQAAAVAPRPV*AALPHAQWPRGLCVHLHQ
PDSGAARAGGRATASV*RAALPARPAPGGP*GR
PREEAHQLTDQPPE*LGLQVCTTVPS*FLYFSRD
GGFTMLAGLVSNS*PQVIHPPEPPKVLGLQA*A
TAPGPLCHCLSHL*KQVLTKG*GQNSSRTITFG
NLL*EC*GTRSVRTRGRAGIFLSDYT*FEMVQA*
S*ASKGLDLSSFRNAGSRASPSLQKPTNSADGA
RTVGF*QPTGDPNISGHGLRTCPVMLLISQRSS
KTQQSQK*PPAQRLRCQLCSDSPGVRQ*SLPPAG
HLPGHTPVPSKC*NSLDRLPVSKWGKPCVRVIY
LSAPVCAGVGAHFAKPQRFWFWVYSLVCLARRI
FSIFLSHFMFLSGEGKLVKYH*CGLRPALCETLK
*EVKADEKKEKAFLCSFMFSAQKETRECRFKTK
TGEKTNPAPAGVS*NQNFIVADTLSDLS*VYTS
AKGNRAATA*GHPLGVSVCPLSKQSSYRDGTWRM
ATHSTATSVLRTSSQGHRTVFKMIAHLF*KSKI
LHVTKSKVLCGF*TMTVCLLSCPTTKQSSRAPG
GEGFQPP*WQGVLWGGERREQAVLENSSTLTSGH
ASLLDVLSTDRSGLLPSPKGVVSRSAGHLSVSP
FTSRKMYI*A*TTRLHTVRPGHCPGSCCRRRSV
EKGPGTPHPTPN*EQVESQRQGPATCSYPDPVS*
AAQLEACGPRLPAILRPEQGLGRGWAGWASPSG
VWGGRTRREEPVLRAPNFTLHSSPGLH*HKGHK
ESDLFTKY*KVS*SSTQYPPSCHYLYMH*FGKNK
NFF*KKKKMITGWE*ACFTLCQRAQLAWLFWSA
RGQCPLPGGRLQTQTRGLRRWEAPVRAGWRPER
TCQLLVGLKSATRQRVGGEPRVLHTKHSDDRGGE
GSAHLLAEMTLYIVDPWDWENGWQQSLRKQKPR
WPGARVSS*GWSHPTPAAAAGLRSGGRPAPPPP
PRCSPTRRW*CHPLLRRPRFPLPLPLPPPPHCCA
GPHR

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