Sequences - Rnomics 📊 Palace

        ☰
    
        Rnomics 📊 Palace
    
                       Back to Rnomics Platform
            
                       Open Session

1 warning:

Access restricted to public data.
Please sign in at Rnomics Platform to access your data.

Navigation

Home

Sequences

Sequence CTDP1.eAug05

GAGGTGCAGCCGAGTGAGGGCCTTGGTGGGGTGCAGCCGGGTGAGGGCCCTGGTGGGGTACAGCTGGGTGAGGGCCCTGAGCCCTGCAGGGGTGCAGTCA GGTGAAGGCCCTGGTGGGATGCAGCCGAGTGAGGGCCCTGAGCCCTGGTGGGGTACAGCCAGGTGAGGGCCCTGGTGGGTGCAGCCGGATGTGGGCCCTG AGCCTCCAGTGCTGGCCGGAACAGCCTGACGCAGCCGGGTCTCCTGCAGGCACAGAGAAGGTGCTGCAGGCACAGGAGTGCGGACACCTGCACGTGGTCA ACCCTGACTGGCTGTGGAGCTGCCTGGAGCGCTGGGACAAGGTGGAGGAGCAGCTCTTCCCGCTCAGGGACGATCACACCAAGGCACAGAGGGAGAACAG CCCTGCGGCCTTTCCCGACCGGGAGGGTGTGCCCCCCACCGCCTTGTTCCACCCGATGCCGGTTCTTCCCAAGGCCCAGCCTGGCCCCGAGGTTCGGATC TACGACTCCAACACGGGGAAGCTCATCAGGACGGGCGCCCGGGGGCCCCCAGCACCCTCCAGCTCCCTACCCATCCGCCAGGAGCCCTCTTCCTTCAGAG GCCACAAGAGGAAGCTGAATGAAGAGGACGCCGCCAGCGAGTCCAGCAGGGAGTCCAGCAACGAGGATGAGGGCAGCAGCTCCGAGGCCGACGAGATGGC CAAGGCGCTGGAGGCGGAGCTCAACGACCTCATGTGAGCGCGGGCAGCGGGCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGA CCAGCCCTCAGTCTCGGTCCACGCTGCTTTCTTCCCAAAGGACATGTATATTTGCAGAGCTCCACATACAGAAACACATTATTTTGCAGAAATAGGTGTT TTTAAGAAGTTTTACTACAGGAATGTCTACTTTTGTAAGTGACAGGTGTTAAAGGCCCAGGTGTGCTGTGCCAAAGAGCTCAGCAGAGGCTCACGTGGCC CAGGCTGGTGCGCCCGCTGTCTCGGTAAGGGGCGGGTTGGTGTGTTTTCCCCTTGTGTACCAGAGCACATTCCTTAGGGGACGGCTTTGGGGGTCCCACG AGACATGGACTAGGAGTTTAAGCAGGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGCCGCCTGCTGCTCCCTCCTAG GGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTGGAGCTTCCTGCAGCCTCCTACGCAGGGTCCACGCCACGTGGCCTGGGCTGCCATCCTG CCGTCCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTTCCTGGGCGGCCTTTTATGTCTTGGAGACACCTGATGTAAAGTTTCTGTAAATCTATTTC ATATCTGACCCACCAAACAGATTTCTCTTTAATAAAAATCCTTTTTGTAAGTTCTCT

CTDP1.F7 (forward primer)
CTDP1.R7 (reverse primer)
Single exon skipping

Frame 0

EVQPSEGLGGVQPGEGPGGVQLGEGPEPCRGAV R*RPWWDAAE*GP*ALVGYSQVRALVGAAGCGP* ASSAGRNSLTQPGLLQAQRRCCRHRSADTCTWS TLTGCGAAWSAGTRWRSSSSRSGTITPRHRGRT ALRPFPTGRVCPPPPCSTRCRFFPRPSLAPRFGS TTPTRGSSSGRAPGGPQHPPAPYPSARSPLPSE ATRGS*MKRTPPASPAGSPATRMRAAAPRPTRW PRRWRRSSTTSCERGQRAGTEA*PTSSSTRTSPD QPSVSVHAAFFPKDMYICRAPHTETHYFAEIGV FKKFYYRNVYFCK*QVLKAQVCCAKELSRGSRG PGWCARCLGKGRVGVFSPCVPEHIP*GTALGVPR DMD*EFKQDSVRARAPSPAQTCLEPPPPAAPS* GTHFRGTP*LSGSLELPAASYAGSTPRGLGCHP AVLPLASWQGGVAFPGRPFMSWRHLM*SFCKSIS YLTHQTDFSLIKILFVSS

Frame 1

RCSRVRALVGCSRVRALVGYSWVRALSPAGVQS GEGPGGMQPSEGPEPWWGTAR*GPWWVQPDVGP EPPVLAGTA*RSRVSCRHREGAAGTGVRTPARGQ P*LAVELPGALGQGGGAALPAQGRSHQGTEGEQ PCGLSRPGGCAPHRLVPPDAGSSQGPAWPRGSD LRLQHGEAHQDGRPGAPSTLQLPTHPPGALFLQR PQEEAE*RGRRQRVQQGVQQRG*GQQLRGRRDG QGAGGGAQRPHVSAGSGQGLKPDRPPAALGRPR TSPQSRSTLLSSQRTCIFAELHIQKHIILQK*VF LRSFTTGMSTFVSDRC*RPRCAVPKSSAEAHVA QAGAPAVSVRGGLVCFPLVYQSTFLRGRLWGSH ETWTRSLSRTVCVHELRAQHRHAWNPRRLLLPPR EPISGERRDCRAAWSFLQPPTQGPRHVAWAAIL PSSHWHPGKGALLFLGGLLCLGDT*CKVSVNLF HI*PTKQISL**KSFL*VL

Frame 2

GAAE*GPWWGAAG*GPWWGTAG*GP*ALQGCSQ VKALVGCSRVRALSPGGVQPGEGPGGCSRMWAL SLQCWPEQPDAAGSPAGTEKVLQAQECGHLHVV NPDWLWSCLERWDKVEEQLFPLRDDHTKAQRENS PAAFPDREGVPPTALFHPMPVLPKAQPGPEVRI YDSNTGKLIRTGARGPPAPSSSLPIRQEPSSFR GHKRKLNEEDAASESSRESSNEDEGSSSEADEMA KALEAELNDLM*ARAAGRD*SLTDLQQHSDVPG PALSLGPRCFLPKGHVYLQSSTYRNTLFCRNRC F*EVLLQECLLL*VTGVKGPGVLCQRAQQRLTWP RLVRPLSR*GAGWCVFPLCTRAHSLGDGFGGPT RHGLGV*AGQCACTSSEPSTDMPGTPAACCSLL GNPFPGNAVTVGQPGASCSLLRRVHATWPGLPSC RPPTGILARGRCFSWAAFYVLETPDVKFL*IYF ISDPPNRFLFNKNPFCKFS

Sequence CTDP1.cAug05

GGAAGTCGGCGCGGGCTAGGCGACGGGTGGAAGCCGGTACCGAGAGGAACTACAGCGTCGCCGCCTGGGTTGTGTCGCCGCGGTAGGCGCTGCGCTCTGA GCGCAGCGCAGGCCCCGTACCGACCGCCCGCCCGCCCTCTGTCCGCGATGGAGGTGCCGGCCGCGGGTCGCGTTCCTGCCGAGGGCGCCCCGACGGCGGC TGTGGCCGAGGTGCGCTGCCCGGGGCCCGCGCCGCTGCGCCTGCTGGAGTGGAGGGTGGCGGCGGGCGCGGCCGTGCGCATCGGCTCGGTGCTGGCCGTG TTCGAGGCCGCCGCCTCCGCGCAGTCCTCCGGGGCCTCTCAGTCCCGTGTAGCCTCCGGGGGCTGCGTGCGCCCCGCGCGGCCGGAACGCAGGCTGAGGT CGGAGCGCGCGGGCGTGGTGCGGGAGCTGTGCGCGCAGCCGGGCCAGGTGGTCGCCCCAGGAGCGGTTCTGGTGAGGTTGGAAGGATGCAGCCACCCGGT TGTCATGAAAGGCCTGTGTGCTGAATGTGGCCAAGACCTCACCCAGTTGCAGAGTAAGAACGGGAAGCAGCAGGTGCCGCTGTCCACGGCGACCGTGTCC ATGGTGCACAGCGTGCCGGAGTTGATGGTGAGCTCCGAGCAAGCTGAACAGCTGGGAAGAGAAGACCAGCAGCGACTGCACCGAAACCGGAAGCTGGTGC TCATGGTGGACTTGGACCAGACGTTGATTCACACAACCGAGCAGCACTGTCAGCAGATGTCGAATAAAGGCATCTTTCACTTCCAGCTGGGCCGGGGTGA GCCCATGCTGCACACGCGCCTGCGTCCACACTGCAAGGACTTCCTGGAGAAGATCGCCAAGCTGTACGAGCTGCACGTCTTCACCTTCGGCAGCCGGCTG TACGCACACACCATCGCAGGCTTTTTAGACCCCGAGAAGAAGCTTTTTTCTCACCGAATATTATCAAGGGATGAATGTATTGACCCATTTTCTAAAACGG GAAACCTTAGAAATCTCTTTCCTTGTGGAGACTCAATGGTTTGCATTATTGATGATCGAGAAGATGTCTGGAAGTTTGCCCCCAATCTGATAACTGTGAA GAAATATGTATACTTCCAGGGCACGGGTGATATGAATGCGCCCCCTGGGTCCCGAGAATCTCAGACGAGAAAGAAAGTAAATCATTCTCGAGGCACTGAG GTCTCAGAGCCATCTCCGCCCGTGAGAGACCCTGAGGGGGTAACGCAGGCCCCTGGAGTGGAGCCCAGCAATGGCCTGGAGAAGCCTGCACGGGAGCTGA ACGGCAGCGAGGCCGCCACCCCGCGGGACTCACCCCGCCCCGGGAAGCCAGACGAGAGGGACATCTGGCCCCCTGCCCAGGCCCCCACCAGCAGCCAAGA GCTGGCAGGCGCTCCTGAGCCCCAGGGATCCTGTGCGCAGGGTGGCCGGGTGGCACCGGGACAGCGGCCTGCCCAGGGTGCCACGGGCACTGACCTGGAC TTTGACTTATCCAGCGACAGCGAGAGCAGCAGTGAGTCCGAGGGCACGAAGTCCTCCTCCTCCGCCTCTGATGGCGAAAGCGAGGGGAAAAGAGGCCGGC AGAAGCCGAAGGCTGCCCCAGAGGGAGCCGGGGCGCTGGCACAGGGCAGTTCCCTGGAGCCGGGGCGGCCTGCAGCACCGAGTCTCCCCGGAGAGGCCGA GCCTGGCGCGCATGCCCCGGACAAGGAGCCTGAGCTGGGTGGGCAGGAGGAGGGCGAGCGGGATGGCCTCTGCGGCCTGGGCAACGGCTGTGCCGACAGG AAGGAGGCGGAGACCGAGTCACAGAACAGCGAGCTGTCGGGGGTCACTGCGGGTGAGTCCCTGGACCAGAGCATGGAGGAGGAGGAGGAGGAGGACACGG ATGAGGATGACCACCTCATCTACCTGGAGGAGATCCTGGTCCGTGTACACACTGACTACTATGCCAAGTATGACCGCTACCTCAACAAGGAGATCGAGGA GGCGCCGGACATCCGCAAGATCGTGCCGGAGCTCAAGAGCAAGGTGCTGGCAGACGTGGCCATAATTTTCAGTGGGCTACACCCGACAAACTTCCCGATA GAGAAGACGCGGGAGCATTACCACGCCACGGCGCTGGGAGCGAAGATCCTCACTCGGCTGGTGCTGAGCCCCGACGCCCCTGACAGGGCCACGCACCTGA TCGCCGCGCGAGCTGGCACAGAGAAGGTGCTGCAGGCACAGGAGTGCGGACACCTGCACGTGGTCAACCCTGACTGGCTGTGGAGCTGCCTGGAGCGCTG GGACAAGGTGGAGGAGCAGCTCTTCCCGCTCAGGGACGATCACACCAAGGCACAGAGGGAGAACAGCCCTGCGGCCTTTCCCGACCGGGAGGGTGTGCCC CCCACCGCCTTGTTCCACCCGATGCCGGTTCTTCCCAAGGCCCAGCCTGGCCCCGAGGTTCGGATCTACGACTCCAACACGGGGAAGCTCATCAGGACGG GCGCCCGGGGGCCCCCAGCACCCTCCAGCTCCCTACCCATCCGCCAGGAGCCCTCTTCCTTCAGAGCGGTTCCGCCACCCCAGCCGCAGATGTTTGGTGA AGAGCTGCCTGACGCTCAGGACGGAGAGCAGCCTGGCCCTTCTAGAAGAAAGCGACAGCCCAGTATGTCTGAGACAATGCCGCTGTACACTCTTTGTAAG GAGGATTTAGAGAGTATGGACAAAGAGAGGCCACAAGAGGAAGCTGAATGAAGAGGACGCCGCCAGCGAGTCCAGCAGGGAGTCCAGCAACGAGGATGAG GGCAGCAGCTCCGAGGCCGACGAGATGGCCAAGGCGCTGGAGGCGGAGCTCAACGACCTCATGTGAGCGCGGGCAGCGGGCAGGGACTGAAGCCTGACCG ACCTCCAGCAGCACTCGGACGTCCCCGGACCAGCCCTCAGTCTCGGTCCACGCTGCTTTCTTCCCAAAGGACATGTATATTTGCAGAGCTCCACATACAG AAACACATTATTTTGCAGAAATAGGTGTTTTTAAGAAGTTTTACTACAGGAATGTCTACTTTTGTAAGTGACAGGTGTTAAAGGCCCAGGTGTGCTGTGC CAAAGAGCTCAGCAGAGGCTCACGTGGCCCAGGCTGGTGCGCCCGCTGTCTCGGTAAGGGGCGGGTTGGTGTGTTTTCCCCTTGTGTACCAGAGCACATT CCTTAGGGGACGGCTTTGGGGGTCCCACGAGACATGGACTAGGAGTTTAAGCAGGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGG AACCCCCGCCGCCTGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTGGAGCTTCCTGCAGCCTCCTACGCAGGGTC CACGCCACGTGGCCTGGGCTGCCATCCTGCCGTCCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTTCCTGGGCGGCCTTTTATGTCTTGGAGACAC CTGATGTAAAGTTTCTGTAAATCTATTTCATATCTGACCCACCAAACAGATTTCTCTTTAATAAAAATCCTTTTTGTAAGTTCTCT

CTDP1.F7 (forward primer)
CTDP1.R7 (reverse primer)
Single exon skipping

Frame 0

GSRRGLGDGWKPVPRGTTASPPGLCRRGRRCAL SAAQAPYRPPARPLSAMEVPAAGRVPAEGAPTAA VAEVRCPGPAPLRLLEWRVAAGAAVRIGSVLAV FEAAASAQSSGASQSRVASGGCVRPARPERRLR SERAGVVRELCAQPGQVVAPGAVLVRLEGCSHPV VMKGLCAECGQDLTQLQSKNGKQQVPLSTATVS MVHSVPELMVSSEQAEQLGREDQQRLHRNRKLV LMVDLDQTLIHTTEQHCQQMSNKGIFHFQLGRGE PMLHTRLRPHCKDFLEKIAKLYELHVFTFGSRL YAHTIAGFLDPEKKLFSHRILSRDECIDPFSKT GNLRNLFPCGDSMVCIIDDREDVWKFAPNLITVK KYVYFQGTGDMNAPPGSRESQTRKKVNHSRGTE VSEPSPPVRDPEGVTQAPGVEPSNGLEKPAREL NGSEAATPRDSPRPGKPDERDIWPPAQAPTSSQE LAGAPEPQGSCAQGGRVAPGQRPAQGATGTDLD FDLSSDSESSSESEGTKSSSSASDGESEGKRGR QKPKAAPEGAGALAQGSSLEPGRPAAPSLPGEAE PGAHAPDKEPELGGQEEGERDGLCGLGNGCADR KEAETESQNSELSGVTAGESLDQSMEEEEEEDT DEDDHLIYLEEILVRVHTDYYAKYDRYLNKEIEE APDIRKIVPELKSKVLADVAIIFSGLHPTNFPI EKTREHYHATALGAKILTRLVLSPDAPDRATHL IAARAGTEKVLQAQECGHLHVVNPDWLWSCLERW DKVEEQLFPLRDDHTKAQRENSPAAFPDREGVP PTALFHPMPVLPKAQPGPEVRIYDSNTGKLIRT GARGPPAPSSSLPIRQEPSSFRAVPPPQPQMFGE ELPDAQDGEQPGPSRRKRQPSMSETMPLYTLCK EDLESMDKERPQEEAE*RGRRQRVQQGVQQRG* GQQLRGRRDGQGAGGGAQRPHVSAGSGQGLKPDR PPAALGRPRTSPQSRSTLLSSQRTCIFAELHIQ KHIILQK*VFLRSFTTGMSTFVSDRC*RPRCAV PKSSAEAHVAQAGAPAVSVRGGLVCFPLVYQSTF LRGRLWGSHETWTRSLSRTVCVHELRAQHRHAW NPRRLLLPPREPISGERRDCRAAWSFLQPPTQG PRHVAWAAILPSSHWHPGKGALLFLGGLLCLGDT *CKVSVNLFHI*PTKQISL**KSFL*VL

Frame 1

EVGAG*ATGGSRYREELQRRRLGCVAAVGAAL* AQRRPRTDRPPALCPRWRCRPRVAFLPRAPRRR LWPRCAARGPRRCACWSGGWRRARPCASARCWPC SRPPPPRSPPGPLSPV*PPGAACAPRGRNAG*G RSARAWCGSCARSRARWSPQERFW*GWKDAATR LS*KACVLNVAKTSPSCRVRTGSSRCRCPRRPCP WCTACRS*W*APSKLNSWEEKTSSDCTETGSWC SWWTWTRR*FTQPSSTVSRCRIKASFTSSWAGV SPCCTRACVHTARTSWRRSPSCTSCTSSPSAAGC THTPSQAF*TPRRSFFLTEYYQGMNVLTHFLKR ETLEISFLVETQWFALLMIEKMSGSLPPI**L* RNMYTSRARVI*MRPLGPENLRRERK*IILEALR SQSHLRP*ETLRG*RRPLEWSPAMAWRSLHGS* TAARPPPRGTHPAPGSQTRGTSGPLPRPPPAAK SWQALLSPRDPVRRVAGWHRDSGLPRVPRALTWT LTYPATARAAVSPRARSPPPPPLMAKARGKEAG RSRRLPQREPGRWHRAVPWSRGGLQHRVSPERP SLARMPRTRSLSWVGRRRASGMASAAWATAVPTG RRRRPSHRTASCRGSLRVSPWTRAWRRRRRRTR MRMTTSSTWRRSWSVYTLTTMPSMTATSTRRSR RRRTSARSCRSSRARCWQTWP*FSVGYTRQTSR* RRRGSITTPRRWERRSSLGWC*APTPLTGPRT* SPRELAQRRCCRHRSADTCTWSTLTGCGAAWSA GTRWRSSSSRSGTITPRHRGRTALRPFPTGRVCP PPPCSTRCRFFPRPSLAPRFGSTTPTRGSSSGR APGGPQHPPAPYPSARSPLPSERFRHPSRRCLV KSCLTLRTESSLALLEESDSPVCLRQCRCTLFVR RI*RVWTKRGHKRKLNEEDAASESSRESSNEDE GSSSEADEMAKALEAELNDLM*ARAAGRD*SLT DLQQHSDVPGPALSLGPRCFLPKGHVYLQSSTYR NTLFCRNRCF*EVLLQECLLL*VTGVKGPGVLC QRAQQRLTWPRLVRPLSR*GAGWCVFPLCTRAH SLGDGFGGPTRHGLGV*AGQCACTSSEPSTDMPG TPAACCSLLGNPFPGNAVTVGQPGASCSLLRRV HATWPGLPSCRPPTGILARGRCFSWAAFYVLET PDVKFL*IYFISDPPNRFLFNKNPFCKFS

Frame 2

KSARARRRVEAGTERNYSVAAWVVSPR*ALRSE RSAGPVPTARPPSVRDGGAGRGSRSCRGRPDGG CGRGALPGARAAAPAGVEGGGGRGRAHRLGAGR VRGRRLRAVLRGLSVPCSLRGLRAPRAAGTQAEV GARGRGAGAVRAAGPGGRPRSGSGEVGRMQPPG CHERPVC*MWPRPHPVAE*EREAAGAAVHGDRV HGAQRAGVDGELRAS*TAGKRRPAATAPKPEAGA HGGLGPDVDSHNRAALSADVE*RHLSLPAGPG* AHAAHAPASTLQGLPGEDRQAVRAARLHLRQPA VRTHHRRLFRPREEAFFSPNIIKG*MY*PIF*NG KP*KSLSLWRLNGLHY**SRRCLEVCPQSDNCE EICILPGHG*YECAPWVPRISDEKESKSFSRH* GLRAISARERP*GGNAGPWSGAQQWPGEACTGAE RQRGRHPAGLTPPREARREGHLAPCPGPHQQPR AGRRS*APGILCAGWPGGTGTAACPGCHGH*PG L*LIQRQREQQ*VRGHEVLLLRL*WRKRGEKRPA EAEGCPRGSRGAGTGQFPGAGAACSTESPRRGR AWRACPGQGA*AGWAGGGRAGWPLRPGQRLCRQ EGGGDRVTEQRAVGGHCG*VPGPEHGGGGGGGHG *G*PPHLPGGDPGPCTH*LLCQV*PLPQQGDRG GAGHPQDRAGAQEQGAGRRGHNFQWATPDKLPD REDAGALPRHGAGSEDPHSAGAEPRRP*QGHAPD RRASWHREGAAGTGVRTPARGQP*LAVELPGAL GQGGGAALPAQGRSHQGTEGEQPCGLSRPGGCA PHRLVPPDAGSSQGPAWPRGSDLRLQHGEAHQDG RPGAPSTLQLPTHPPGALFLQSGSATPAADVW* RAA*RSGRRAAWPF*KKATAQYV*DNAAVHSL* GGFREYGQREATRGS*MKRTPPASPAGSPATRMR AAAPRPTRWPRRWRRSSTTSCERGQRAGTEA*P TSSSTRTSPDQPSVSVHAAFFPKDMYICRAPHT ETHYFAEIGVFKKFYYRNVYFCK*QVLKAQVCCA KELSRGSRGPGWCARCLGKGRVGVFSPCVPEHI P*GTALGVPRDMD*EFKQDSVRARAPSPAQTCL EPPPPAAPS*GTHFRGTP*LSGSLELPAASYAGS TPRGLGCHPAVLPLASWQGGVAFPGRPFMSWRH LM*SFCKSISYLTHQTDFSLIKILFVSS