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Sequences

Sequence C11ORF4.bAug05

CAAGGCTCCTCGTCCGCATCCTTTTTCCTCCCTCCTTCGGCCCCGGGGCTCACATCCTCGCTGCCTCACACCTTGGGCGTGTGTGGGAGCAGGAGAGGGA TTCTCTGGGGTCCCCATTTGGAACCTGGAGACCCACTTCTGCCAACAAGTCCTTCAGCCCCTCTGGGCCTTAGTTTCCCCCCAGTGAAGTGGGGATAGTG ACAGCTCCCCCGGGAGCCAGTGAAAACTTTGTGAAGGGAGTGATTACTGCGGGCGAAGGCGCTTGGCACAGCCACAACTGAAGCTCAGCCGTCGGATGTG ATTATTGTTGCTATTGTTACCGCTCCGCCTGGACTGGGTGCCCGGTCGGAAAGTCCCGCTCCCCGCTCCTCCTCCCAGGCGCGGAAGCTTCGCGCCGCCC GCCTCGGGGGACACCTCCCGCGCCATCTCGGGGGCACTGGAGATAAGGAAAGGAACCTCCTCCCTGGCTGGGATGGCTGCCCGGGCGCGGGAGGAGGGCC GGGGACCCGGTGAGGGAGGACCGTAGGGCCCGTGGGGGCTTCACGCCTGGCAGGCGGCCGGCCAGGCCTCCCTCCCTGACATGGAGAGTAACCTGTCTGG CCTGGTGCCTGCTGCCGGGCTGGTGCCTGCGCTGCCACCTGCTGTGACCCTGGGGCTGACAGCTGCCTACACCACCCTGTATGCCCTGCTCTTCTTCTCC GTCTATGCCCAGCTCTGGCTGGTGCTTCTGTATGGGCACAAGCGTCTCAGCTATCAGACGGTGTTCCTGGCCCTCTGTCTGCTCTGGGCCGCCTTGCGTA CCACCCTCTTCTCCTTCTACTTCCGAGATACTCCCCGCGCCAACCGCCTGGGGCCCTTGCCCTTCTGGCTTCTCTACTGCTGCCCCGTCTGCCTGCAGTT CTTCACCTTGACGCTTATGAACCTCTACTTTGCCCAGGTGGTGTTCAAGGCCAAGGTGAAGCGTCGGCCGGAGATGAGCCGAGGCTTGCTCGCTGTCCGA GGGGCCTTTGTGGGGGCCTCGCTGCTCTTTCTGCTGGTGAACGTGCTGTGTGCTGTGCTCTCCCATCGGCGCCGGGCACAGCCCTGGGCCCTGCTGCTTG TCCGCGTCCTGGTGAGCGACTCCCTGTTCGTCATCTGCGCGCTGTCTCTTGCTGCCTGCCTCTGCCTCGTCGCCAGGCGGGCGCCCTCCACTAGCATCTA CCTGGAGGCCAAGGCGGACCTGGTGAATGACCTGGGGAACAAAGGCTACCTGGTATTTGGCCTCATCCTCTTCGTGTGGGAGCTACTGCCCACCACCCTG CTGGTGGGCTTCTTCCGGGTGCACCGGCCCCCACAGGACCTGAGCACCAGCCACATCCTCAATGGGCAGGTCTTTGCCTCTCGGTCCTACTTCTTTGACC GGGCTGGGCACTGTGAAGATGAGGGCTGCTCCTGGGAGCACAGCCGGGGTGAGAGCACCAGTATGTCGGGCAGTCTAGGCTCTGGGAGCTGGTATGGTGC CATCGGGCGTGAGCCGGGCTGGTATGGGGGCAGCCAGACGAAGACCACTCCTCTGCTCTTCTCCCAGGTGCCAGGACCAGGCGGCCACCACCACAGTCTC TACTCCACCCCACAGACGTGATCCCCCTCCCTCCCCCACAGAATACCCAGGCCCCAGTCCCCCTCACCCTAGGCCCCTGTGCCAAGTTTGTCTGCCGCTT CTTGCCCAGGATCCTGGGGGTCGTGGCTACCCCCTCCTCTGGCCGGCTCCTTGCTGCTCCTGTCATAGTGAGCTTGTGCCGTCCCCCTAGGATGGGGGGC ATGGCCCTGGCTGCCAGATGCCCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACCTCTCCTGTGCCTGCCACTCAATAA ACAGTGTCTGCGCCCCACAGTTGTG

C11ORF4.F2 (forward primer)
C11ORF4.R2 (reverse primer)
Alternative acceptor

Frame 0

QGSSSASFFLPPSAPGLTSSLPHTLGVCGSRRG ILWGPHLEPGDPLLPTSPSAPLGLSFPPVKWG** QLPREPVKTL*RE*LLRAKALGTATTEAQPSDV IIVAIVTAPPGLGARSESPAPRSSSQARKLRAA RLGGHLPRHLGGTGDKERNLLPGWDGCPGAGGGP GTR*GRTVGPVGASRLAGGRPGLPP*HGE*PVW PGACCRAGACAATCCDPGADSCLHHPVCPALLL RLCPALAGASVWAQASQLSDGVPGPLSALGRLAY HPLLLLLPRYSPRQPPGALALLASLLLPRLPAV LHLDAYEPLLCPGGVQGQGEASAGDEPRLARCP RGLCGGLAALSAGERAVCCALPSAPGTALGPAAC PRPGERLPVRHLRAVSCCLPLPRRQAGALH*HL PGGQGGPGE*PGEQRLPGIWPHPLRVGATAHHP AGGLLPGAPAPTGPEHQPHPQWAGLCLSVLLL*P GWAL*R*GLLLGAQPG*EHQYVGQSRLWELVWC HRA*AGLVWGQPDEDHSSALLPGARTRRPPPQS LLHPTDVIPLPPPQNTQAPVPLTLGPCAKFVCRF LPRILGVVATPSSGRLLAAPVIVSLCRPPRMGG MALAARCPQHPGMTCHLCFHTGASYLSCACHSI NSVCAPQL

Frame 1

KAPRPHPFSSLLRPRGSHPRCLTPWACVGAGEG FSGVPIWNLETHFCQQVLQPLWALVSPQ*SGDS DSSPGSQ*KLCEGSDYCGRRRLAQPQLKLSRRM* LLLLLLPLRLDWVPGRKVPLPAPPPRRGSFAPP ASGDTSRAISGALEIRKGTSSLAGMAARAREEG RGPGEGGP*GPWGLHAWQAAGQASLPDMESNLSG LVPAAGLVPALPPAVTLGLTAAYTTLYALLFFS VYAQLWLVLLYGHKRLSYQTVFLALCLLWAALR TTLFSFYFRDTPRANRLGPLPFWLLYCCPVCLQF FTLTLMNLYFAQVVFKAKVKRRPEMSRGLLAVR GAFVGASLLFLLVNVLCAVLSHRRRAQPWALLL VRVLVSDSLFVICALSLAACLCLVARRAPSTSIY LEAKADLVNDLGNKGYLVFGLILFVWELLPTTL LVGFFRVHRPPQDLSTSHILNGQVFASRSYFFD RAGHCEDEGCSWEHSRGESTSMSGSLGSGSWYGA IGREPGWYGGSQTKTTPLLFSQVPGPGGHHHSL YSTPQT*SPSLPHRIPRPQSPSP*APVPSLSAA SCPGSWGSWLPPPLAGSLLLLS**ACAVPLGWGA WPWLPDAHSTLA*PATSASTPEPATSPVPATQ* TVSAPHSC

Frame 2

RLLVRILFPPSFGPGAHILAASHLGRVWEQERD SLGSPFGTWRPTSANKSFSPSGP*FPPSEVGIV TAPPGASENFVKGVITAGEGAWHSHN*SSAVGC DYCCYCYRSAWTGCPVGKSRSPLLLPGAEASRRP PRGTPPAPSRGHWR*GKEPPPWLGWLPGRGRRA GDPVREDRRARGGFTPGRRPARPPSLTWRVTCL AWCLLPGWCLRCHLL*PWG*QLPTPPCMPCSSSP SMPSSGWCFCMGTSVSAIRRCSWPSVCSGPPCV PPSSPSTSEILPAPTAWGPCPSGFSTAAPSACS SSP*RL*TSTLPRWCSRPR*SVGRR*AEACSLSE GPLWGPRCSFCW*TCCVLCSPIGAGHSPGPCCL SASW*ATPCSSSARCLLLPASASSPGGRPPLAS TWRPRRTW*MTWGTKATWYLASSSSCGSYCPPPC WWASSGCTGPHRT*APATSSMGRSLPLGPTSLT GLGTVKMRAAPGSTAGVRAPVCRAV*ALGAGMV PSGVSRAGMGAARRRPLLCSSPRCQDQAATTTVS TPPHRRDPPPSPTEYPGPSPPHPRPLCQVCLPL LAQDPGGRGYPLLWPAPCCSCHSELVPSP*DGG HGPGCQMPTAPWHDLPPLLPHRSQLPLLCLPLNK QCLRPTVV

Sequence C11ORF4.dAug05

GCTTTATTAACATTTGGTAGTGAGCACGGCCCCCAGGGCATCGCGGGGGCTCGGGTCCCGGTGACGCAACGGTTAAACCTGGCTCGCGACTTAGCGCAGG CGCCTGGGGGAAAGCCCGGAGCCTGAGGGCGGGGCCACGGAGCCACTTCCGGCGGCTGTGGGCGGAAAACCCAAAACTTCCGATGGGACCAAGCCTTCCG TGGCTTCACACGCACCGGAAGGGAATCTGGGTCAGCCCTCCCTCCAAAGGAGACAGCACGGATCCTCTTTTTGCATAGGCCTGAGGGAAGTACTTCCGCC CATATTCAAGATGGCTGCCCAGGGCAGTGGGAACGGGTGGAGTTTCGGGATGTGGAGCGAAGGTCACTGGGAGGGGGCGGAGCTTCCCCTGCCCAAGTTC CGATCCCACCAGGACTGGAAGACTCGCGTCCAGCTGGAGCTTTGCCGCATCTGCGTTGCTGTGCCCGCGCTCTTCGGGCGAGGAAGTCCCTTCTGGTGGA GGGAGAAAAGGGTTACATGAGTTAGATTACCATGGCAGCTCGAGCCAGGCTCTCCACTTCCGTGAGCCTTCCTCTAAGTGAGATCGGGGGGGAGATAATG AAGGCCACAACTCCCAGGAGGCTCCACGCCGGGCGGTCAGGGACGCTCGCGAGGACGCATGGGCCCCCAGGAATGGGAACTGGTTAGATCCCAGGAACTC CGTGCCGGAGACGGGAAGAGAGGATGCCTAGGGCCCTAAATGGAAAGGCCAGAGCTGGAGACCTAGCACCCAGAAGATGAGACCGCAATTCGAGAATCAA AGGGCCGGGAGCGATGGCCTCCCTCCCTGACATGGAGAGTAACCTGTCTGGCCTGGTGCCTGCTGCCGGGCTGGTGCCTGCGCTGCCACCTGCTGTGACC CTGGGGCTGACAGCTGCCTACACCACCCTGTATGCCCTGCTCTTCTTCTCCGTCTATGCCCAGCTCTGGCTGGTGCTTCTGTATGGGCACAAGCGTCTCA GCTATCAGACGGTGTTCCTGGCCCTCTGTCTGCTCTGGGCCGCCTTGCGTACCACCCTCTTCTCCTTCTACTTCCGAGATACTCCCCGCGCCAACCGCCT GGGGCCCTTGCCCTTCTGGCTTCTCTACTGCTGCCCCGTCTGCCTGCAGTTCTTCACCTTGACGCTTATGAACCTCTACTTTGCCCAGGTGGTGTTCAAG GCCAAGGTGAAGCGTCGGCCGGAGATGAGCCGAGGCTTGCTCGCTGTCCGAGGGGCCTTTGTGGGGGCCTCGCTGCTCTTTCTGCTGGTGAACGTGCTGT GTGCTGTGCTCTCCCATCGGCGCCGGGCACAGCCCTGGGCCCTGCTGCTTGTCCGCGTCCTGGTGAGCGACTCCCTGTTCGTCATCTGCGCGCTGTCTCT TGCTGCCTGCCTCTGCCTCGTCGCCAGGCGGGCGCCCTCCACTAGCATCTACCTGGAGGCCAAGGGGACCAGTGTGTGCCAGGCGGCCGCGATGGGTGGC GCCATGGTCCTGCTCTATGCCAGCCGGGCCTGCTACAACCTGACAGCACTGGCCTTGGCCCCCCAGAGCCGGCTGGACACCTTCGATTACGACTGGTACA ATGTGTCTGACCAGGTGGGCATACGCATGTCTGCCACCTCCTTAGTAGCCGTGGCACCTTGGCCCCAGCTGGCCTGGGCCCTGTCCCACTACCCCTTTGG CGTGACTGCAGACTGGCACCAGCCCCTGCCTTCCCACAGGCGGACCTGGTGAATGACCTGGGGAACAAAGGCTACCTGGTATTTGGCCTCATCCTCTTCG TGTGGGAGCTACTGCCCACCACCCTGCTGGTGGGCTTCTTCCGGGTGCACCGGCCCCCACAGGACCTGAGCACCAGCCACATCCTCAATGGGCAGGTCTT TGCCTCTCGGTCCTACTTCTTTGACCGGGCTGGGCACTGTGAAGATGAGGGCTGCTCCTGGGAGCACAGCCGGGGTGAGAGCACCAGTATGTCGGGCAGT CTAGGCTCTGGGAGCTGGTATGGTGCCATCGGGCGTGAGCCGGGCTGGTATGGGGGCAGCCAGACGAAGACCACTCCTCTGCTCTTCTCCCAGGTGCCAG GACCAGGCGGCCACCACCACAGTCTCTACTCCACCCCACAGACGTGATCCCCCTCCCTCCCCCACAGAATACCCAGGCCCCAGTCCCCCTCACCCTAGGC CCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTGGCTACCCCCTCCTCTGGCCGGCTCCTTGCTGCTCCTGTCATAGTGAGCT TGTGCCGTCCCCCTAGGATGGGGGGCATGGCCCTGGCTGCCAGATGCCCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTA CCTCTCCTGTGCCTGCCACTCAATAAACAGTGTCTGCGCCCCACAGTTGTG

C11ORF4.F2 (forward primer)
C11ORF4.R2 (reverse primer)
Alternative acceptor

Frame 0

ALLTFGSEHGPQGIAGARVPVTQRLNLARDLAQ APGGKPGA*GRGHGATSGGCGRKTQNFRWDQAFR GFTRTGRESGSALPPKETARILFLHRPEGSTSA HIQDGCPGQWERVEFRDVERRSLGGGGASPAQV PIPPGLEDSRPAGALPHLRCCARALRARKSLLVE GEKGYMS*ITMAARARLSTSVSLPLSEIGGEIM KATTPRRLHAGRSGTLARTHGPPGMGTG*IPGT PCRRREERMPRALNGKARAGDLAPRR*DRNSRIK GPGAMASLPDMESNLSGLVPAAGLVPALPPAVT LGLTAAYTTLYALLFFSVYAQLWLVLLYGHKRL SYQTVFLALCLLWAALRTTLFSFYFRDTPRANRL GPLPFWLLYCCPVCLQFFTLTLMNLYFAQVVFK AKVKRRPEMSRGLLAVRGAFVGASLLFLLVNVL CAVLSHRRRAQPWALLLVRVLVSDSLFVICALSL AACLCLVARRAPSTSIYLEAKGTSVCQAAAMGG AMVLLYASRACYNLTALALAPQSRLDTFDYDWY NVSDQVGIRMSATSLVAVAPWPQLAWALSHYPFG VTADWHQPLPSHRRTW*MTWGTKATWYLASSSS CGSYCPPPCWWASSGCTGPHRT*APATSSMGRS LPLGPTSLTGLGTVKMRAAPGSTAGVRAPVCRAV *ALGAGMVPSGVSRAGMGAARRRPLLCSSPRCQ DQAATTTVSTPPHRRDPPPSPTEYPGPSPPHPR PLCQVCLPLLAQDPGGRGYPLLWPAPCCSCHSEL VPSP*DGGHGPGCQMPTAPWHDLPPLLPHRSQL PLLCLPLNKQCLRPTVV

Frame 1

LY*HLVVSTAPRASRGLGSR*RNG*TWLAT*RR RLGESPEPEGGATEPLPAAVGGKPKTSDGTKPS VASHAPEGNLGQPSLQRRQHGSSFCIGLREVLPP IFKMAAQGSGNGWSFGMWSEGHWEGAELPLPKF RSHQDWKTRVQLELCRICVAVPALFGRGSPFWW REKRVT*VRLPWQLEPGSPLP*AFL*VRSGGR** RPQLPGGSTPGGQGRSRGRMGPQEWELVRSQEL RAGDGKRGCLGP*MERPELET*HPEDETAIRES KGRERWPPSLTWRVTCLAWCLLPGWCLRCHLL*P WG*QLPTPPCMPCSSSPSMPSSGWCFCMGTSVS AIRRCSWPSVCSGPPCVPPSSPSTSEILPAPTA WGPCPSGFSTAAPSACSSSP*RL*TSTLPRWCSR PR*SVGRR*AEACSLSEGPLWGPRCSFCW*TCC VLCSPIGAGHSPGPCCLSASW*ATPCSSSARCL LLPASASSPGGRPPLASTWRPRGPVCARRPRWVA PWSCSMPAGPATT*QHWPWPPRAGWTPSITTGT MCLTRWAYACLPPP**PWHLGPSWPGPCPTTPL A*LQTGTSPCLPTGGPGE*PGEQRLPGIWPHPLR VGATAHHPAGGLLPGAPAPTGPEHQPHPQWAGL CLSVLLL*PGWAL*R*GLLLGAQPG*EHQYVGQ SRLWELVWCHRA*AGLVWGQPDEDHSSALLPGAR TRRPPPQSLLHPTDVIPLPPPQNTQAPVPLTLG PCAKFVCRFLPRILGVVATPSSGRLLAAPVIVS LCRPPRMGGMALAARCPQHPGMTCHLCFHTGASY LSCACHSINSVCAPQL

Frame 2

FINIW**ARPPGHRGGSGPGDATVKPGSRLSAG AWGKARSLRAGPRSHFRRLWAENPKLPMGPSLP WLHTHRKGIWVSPPSKGDSTDPLFA*A*GKYFR PYSRWLPRAVGTGGVSGCGAKVTGRGRSFPCPSS DPTRTGRLASSWSFAASALLCPRSSGEEVPSGG GRKGLHELDYHGSSSQALHFREPSSK*DRGGDN EGHNSQEAPRRAVRDAREDAWAPRNGNWLDPRNS VPETGREDA*GPKWKGQSWRPSTQKMRPQFENQ RAGSDGLPP*HGE*PVWPGACCRAGACAATCCD PGADSCLHHPVCPALLLRLCPALAGASVWAQASQ LSDGVPGPLSALGRLAYHPLLLLLPRYSPRQPP GALALLASLLLPRLPAVLHLDAYEPLLCPGGVQ GQGEASAGDEPRLARCPRGLCGGLAALSAGERAV CCALPSAPGTALGPAACPRPGERLPVRHLRAVS CCLPLPRRQAGALH*HLPGGQGDQCVPGGRDGW RHGPALCQPGLLQPDSTGLGPPEPAGHLRLRLVQ CV*PGGHTHVCHLLSSRGTLAPAGLGPVPLPLW RDCRLAPAPAFPQADLVNDLGNKGYLVFGLILF VWELLPTTLLVGFFRVHRPPQDLSTSHILNGQVF ASRSYFFDRAGHCEDEGCSWEHSRGESTSMSGS LGSGSWYGAIGREPGWYGGSQTKTTPLLFSQVP GPGGHHHSLYSTPQT*SPSLPHRIPRPQSPSP*A PVPSLSAASCPGSWGSWLPPPLAGSLLLLS**A CAVPLGWGAWPWLPDAHSTLA*PATSASTPEPA TSPVPATQ*TVSAPHSC