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Sequences

Sequence SAT.kAug05

SAT.F3 (forward primer)
SAT.R6 (reverse primer)
Intron retention

Frame 0

EPGQCSNAQLLVAGRLVFIRHSPRFLGSWCQPD *EEDAPGRRMRNHLLLLFKYRGLVRKGKKSKRRK WLNS*SAQPLPPTAVTYCG*SRSWLNMNTWKNK *S*LMQKCRKSTGLRKDTALLVLPCTILPMTRG LASYCILRTSS**VIIEALA*DQKF*RI*ARYVL VFGFQICKFTGLF**WNKNWVLRAG*NVTECVF YSLIIGCNEVSLQQHALLGSRME*TIHQLL*KK RCF*SVQ*RGLETVQDRQGVLAKNGNRGVRSAAV DDNLHSILE*IPNFSCFLCCL**NNRMSTHSKA LLPVALLHV*NEVCLKWQSQMQFGESDLSP*IS FDKQQGGVILIYLKKTSFS*VI*MCTMYTLVLRV SV*FFFNKLLFDL

Frame 1

SRANVQMRSS*SRADWCLSVTRRGSLGHGASLT EKRTLPGDE*GTTSSYCSSTGAWSAKGRKAKDE NG*IRDPPSHCRRLQ*HTAADQGAG*I*IHGRTS NLN*CRSAERALDSGRTQHCWFCHVLFYL*PVD WQVIVS*GLLRDE*L*RLWHRIRNSEESKPGMS *FLVSKFVSLLDYFNDGIKIGS*EQAEMSLSVCF TLS**VAMRCRCSSMHFLVAEWNEPSINFYKRR GASDLSSEEGWRLFKIDKEYLLKMATEE*GVLL *MTTSILF*NKFPTSLAFYAVCSEIIE*APIPKL YYQWRCCMFEMRSV*SGNLRCSLESQIFLLEYL SINNKVV*S*YI*KKLHSRESFKCVQCTHWYLE FLFDSFLINYSLI*

Frame 2

AGPMFKCAALSRGPTGVYPSLAEVPWVMVPA*L RRGRSRETNEEPPPPTVQVQGPGPQREEKQKTK MAKFVIRPATAADCSDILRLIKELAKYEYMEEQ VILTDAEVPKEHWTPEGHSIVGFAMYYFTYDPWI GKLLYLEDFFVMSDYRGFGIGSEILKNLSQVCL SFWFPNL*VYWIILMME*KLGLESRLKCH*VCV LLSHNRLQ*GVAAAACTSW*QNGMNHPSTSIKEE VLLICPVKRVGDCSRSTRSTC*KWQQRSEECCC R*QPPFYFRINSQLLLLSMLFVVK**NEHPFQS FITSGVVACLK*GLFKVAISDAVWRVRSFSLNIF R*TTRWCDLNIFEKNFILVSHLNVYNVHTGT*S FCLILF**TTL*F

Sequence SAT.bAug05

GAGCCGGGCCAATGTTCAAATGCGCAGCTCTTAGTCGCGGGCCGACTGGTGTTTATCCGTCACTCGCCGAGGTTCCTTGGGTCATGGTGCCAGCCTGACT GAGAAGAGGACGCTCCCGGGAGACGAATGAGGAACCACCTCCTCCTACTGTTCAAGTACAGGGGCCTGGTCCGCAAAGGGAAGAAAAGCAAAAGACGAAA ATGGCTAAATTCGTGATCCGCCCAGCCACTGCCGCCGACTGCAGTGACATACTGCGGCTGATCAAGGAGCTGGCTAAATATGAATACATGGAAGAACAAG TAATCTTAACTGAAAAAGGTAATTCAACAGTGGCGGGACGGGGGACAAGCGTTCGGTGCCTGTCACCTTCGCCAAGGCCATTACCGCCCCTGCTCCCCCT TCTTGCAGATCTGCTAGAAGATGGTTTTGGAGAGCACCCCTTTTACCACTGCCTGGTTGCAGAAGTGCCGAAAGAGCACTGGACTCCGGAAGGTAACCCC TCGCCCTTTCCAGAAGCCAGAGAGACCAAGTGTTATGTAAGAAGTAGTGTCGGCTGTGTAGAACCACTGACTACACAGGCCGAAGTTACTGAGAACTTGG ACAGAAAAAATAGCCAGCAAGTGTTCAAACTACTGAGGAAAAAAAAAAATTAGATATGCTGCACTTAAGAATACTAGGGCAGGTTAAAAGAGCTGTTTAA GTAAGTATCAGAGTGCTGTGGAGACTCGGAAGTGTTTAAGCTGCTTAAGTAAGTATAAGTGCTGTGGAGACCCGGAAGAGTTAGATATAATGTCATTTGT TGTAATTCAGTTTCATAAAATGGTTCTTGTTTGACCCTAACGTAACAGTTTTTGTAATTGTGTTAAATCACATTTTTTTCTTTAATTTGTCCCAATCTTC AGGTTACAGTCTCTAGCTTCGCCATGTACATGGCCCTTCCGTGTACATGGATGGGCGGGGAGGTAACTAAAAGATCCTTTACACAATAAAGTAGATGATC ATGATAAATGAGGTAAGGTCCTATTATCACACACTTCAAACACGGTAGATCAGAAACCCACTATGATACTCGCTTCCTGTCTGTTTGCTAAGGAATATAA AATGGCTAGAAAGTTTAATTTGAAACCTTTGCCTCCATTTGGAATAGTAGACACCAGTTAAGAGGGTGTCAGATGCCTTTTTTTTTTTTTTTTTTTTGGC TGGTCCCTGTTGATTGGTCAGAAGACAGCTCAGCTAAAAGGGGAAGTTGTCTGGGTGGTTGCTTTTTTTCTGACGTCTGTTCCTCAGGCTGGAAGAAATG AGCAGAAAACAAGGGATGAGTACTTTTTAGAGTATGTGCATGTTACGTAATACCTGTTTCTGGGCAATGCTGCTTCTTCTGACTCAACAAATGGGGAGAG CAAATTGAAAATGCGTAAATTGGAAGGCAAGTTCTGAAATTAAACGTTGTACTTTGGCCTGATGTTCTGACCTTTAAGGAAGCAAGAGTTTGTAAACTTC CAAATATTTACTATTCTGAACTGCCGTGTAAACCTGACGTATTCCCAAGTCAACATACCAGTATACCAATAGGATGTGAATAATGTGTGTGTTGAGTTTA AAACCATAGCAGTTTTGCTCTGGCAAGTAATGAAAGCGTTCTCGCTTCCTGAGTGTGAGCTCCAGCAGACTGCAGAGTGGCCAGTCCACAGTTGTAGCCT GACTTCAGTGAGTTCTGATGTGTGCTTTTTGCAAATACATGTTCTCAGAACAGTGAGATCATCCAGCAGTGGCCTGGACTGCACTCACATAAAAATCATG AGACAGCCATGGCTACTTGTTTCTGTAATACATGCATGTGTGTTTTTTAAAACCTATGATAGGCCTCTGATTCTGCAGCTGCAACTTTTATGGAATGTTT TCCTTCTCCACATCTCATGTGATGCTCTTATTACAGGACACAGCATTGTTGGTTTTGCCATGTACTATTTTACCTATGACCCGTGGATTGGCAAGTTATT GTATCTTGAGGACTTCTTCGTGATGAGTGATTATAGAGGCTTTGGCATAGGATCAGAAATTCTGAAGAATCTAAGCCAGGTTGCAATGAGGTGTCGCTGC AGCAGCATGCACTTCTTGGTAGCAGAATGGAATGAACCATCCATCAACTTCTATAAAAGAAGAGGTGCTTCTGATCTGTCCAGTGAAGAGGGTTGGAGAC TGTTCAAGATCGACAAGGAGTACTTGCTAAAAATGGCAACAGAGGAGTGAGGAGTGCTGCTGTAGATGACAACCTCCATTCTATTTTAGAATAAATTCCC AACTTCTCTTGCTTTCTATGCTGTTTGTAGTGAAATAATAGAATGAGCACCCATTCCAAAGCTTTATTACCAGTGGCGTTGTTGCATGTTTGAAATGAGG TCTGTTTAAAGTGGCAATCTCAGATGCAGTTTGGAGAGTCAGATCTTTCTCCTTGAATATCTTTCGATAAACAACAAGGTGGTGTGATCTTAATATATTT GAAAAAAACTTCATTCTCGTGAGTCATTTAAATGTGTACAATGTACACACTGGTACTTAGAGTTTCTGTTTGATTCTTTTTTAATAAACTACTCTTTGAT TTAATTGTTTGGTGTAAGCA

SAT.F3 (forward primer)
SAT.R6 (reverse primer)
Intron retention

Frame 0

EPGQCSNAQLLVAGRLVFIRHSPRFLGSWCQPD *EEDAPGRRMRNHLLLLFKYRGLVRKGKKSKRRK WLNS*SAQPLPPTAVTYCG*SRSWLNMNTWKNK *S*LKKVIQQWRDGGQAFGACHLRQGHYRPCSP FLQIC*KMVLESTPFTTAWLQKCRKSTGLRKVTP RPFQKPERPSVM*EVVSAV*NH*LHRPKLLRTW TEKIASKCSNY*GKKKIRYAALKNTRAG*KSCL SKYQSAVETRKCLSCLSKYKCCGDPEELDIMSFV VIQFHKMVLV*P*RNSFCNCVKSHFFL*FVPIF RLQSLASPCTWPFRVHGWAGR*LKDPLHNKVDD HDK*GKVLLSHTSNTVDQKPTMILASCLFAKEYK MARKFNLKPLPPFGIVDTS*EGVRCLFFFFFFG WSLLIGQKTAQLKGEVVWVVAFFLTSVPQAGRN EQKTRDEYFLEYVHVT*YLFLGNAASSDSTNGES KLKMRKLEGKF*N*TLYFGLMF*PLRKQEFVNF QIFTILNCRVNLTYSQVNIPVYQ*DVNNVCVEF KTIAVLLWQVMKAFSLPECELQQTAEWPVHSCSL TSVSSDVCFLQIHVLRTVRSSSSGLDCTHIKIM RQPWLLVSVIHACVFFKTYDRPLILQLQLLWNV FLLHISCDALITGHSIVGFAMYYFTYDPWIGKLL YLEDFFVMSDYRGFGIGSEILKNLSQVAMRCRC SSMHFLVAEWNEPSINFYKRRGASDLSSEEGWR LFKIDKEYLLKMATEE*GVLL*MTTSILF*NKFP TSLAFYAVCSEIIE*APIPKLYYQWRCCMFEMR SV*SGNLRCSLESQIFLLEYLSINNKVV*S*YI *KKLHSRESFKCVQCTHWYLEFLFDSFLINYSLI *LFGVS

Frame 1

SRANVQMRSS*SRADWCLSVTRRGSLGHGASLT EKRTLPGDE*GTTSSYCSSTGAWSAKGRKAKDE NG*IRDPPSHCRRLQ*HTAADQGAG*I*IHGRTS NLN*KR*FNSGGTGDKRSVPVTFAKAITAPAPP SCRSARRWFWRAPLLPLPGCRSAERALDSGR*P LALSRSQRDQVLCKK*CRLCRTTDYTGRSY*ELG QKK*PASVQTTEEKKKLDMLHLRILGQVKRAV* VSIRVLWRLGSV*AA*VSISAVETRKS*I*CHL L*FSFIKWFLFDPNVTVFVIVLNHIFFFNLSQSS GYSL*LRHVHGPSVYMDGRGGN*KILYTIK*MI MINEVRSYYHTLQTR*IRNPL*YSLPVCLLRNI KWLESLI*NLCLHLE**TPVKRVSDAFFFFFFLA GPC*LVRRQLS*KGKLSGWLLFF*RLFLRLEEM SRKQGMSTF*SMCMLRNTCFWAMLLLLTQQMGR AN*KCVNWKASSEIKRCTLA*CSDL*GSKSL*TS KYLLF*TAV*T*RIPKSTYQYTNRM*IMCVLSL KP*QFCSGK**KRSRFLSVSSSRLQSGQSTVVA *LQ*VLMCAFCKYMFSEQ*DHPAVAWTALT*KS* DSHGYLFL*YMHVCFLKPMIGL*FCSCNFYGMF SFSTSHVMLLLQDTALLVLPCTILPMTRGLASY CILRTSS**VIIEALA*DQKF*RI*ARLQ*GVAA AACTSW*QNGMNHPSTSIKEEVLLICPVKRVGD CSRSTRSTC*KWQQRSEECCCR*QPPFYFRINS QLLLLSMLFVVK**NEHPFQSFITSGVVACLK*G LFKVAISDAVWRVRSFSLNIFR*TTRWCDLNIF EKNFILVSHLNVYNVHTGT*SFCLILF**TTL* FNCLV*A

Frame 2

AGPMFKCAALSRGPTGVYPSLAEVPWVMVPA*L RRGRSRETNEEPPPPTVQVQGPGPQREEKQKTK MAKFVIRPATAADCSDILRLIKELAKYEYMEEQ VILTEKGNSTVAGRGTSVRCLSPSPRPLPPLLPL LADLLEDGFGEHPFYHCLVAEVPKEHWTPEGNP SPFPEARETKCYVRSSVGCVEPLTTQAEVTENL DRKNSQQVFKLLRKKKN*ICCT*EY*GRLKELFK *VSECCGDSEVFKLLK*V*VLWRPGRVRYNVIC CNSVS*NGSCLTLT*QFL*LC*ITFFSLICPNL QVTVSSFAMYMALPCTWMGGEVTKRSFTQ*SR*S **MR*GPIITHFKHGRSETHYDTRFLSVC*GI* NG*KV*FETFASIWNSRHQLRGCQMPFFFFFFW LVPVDWSEDSSAKRGSCLGGCFFSDVCSSGWKK* AENKG*VLFRVCACYVIPVSGQCCFF*LNKWGE QIENA*IGRQVLKLNVVLWPDVLTFKEARVCKL PNIYYSELPCKPDVFPSQHTSIPIGCE*CVC*V* NHSSFALASNESVLAS*V*APADCRVASPQL*P DFSEF*CVLFANTCSQNSEIIQQWPGLHSHKNH ETAMATCFCNTCMCVF*NL**ASDSAAATFMECF PSPHLM*CSYYRTQHCWFCHVLFYL*PVDWQVI VS*GLLRDE*L*RLWHRIRNSEESKPGCNEVSL QQHALLGSRME*TIHQLL*KKRCF*SVQ*RGLET VQDRQGVLAKNGNRGVRSAAVDDNLHSILE*IP NFSCFLCCL**NNRMSTHSKALLPVALLHV*NE VCLKWQSQMQFGESDLSP*ISFDKQQGGVILIYL KKTSFS*VI*MCTMYTLVLRVSV*FFFNKLLFD LIVWCK