Sequences - Rnomics 📊 Palace

        ☰
    
        Rnomics 📊 Palace
    
                       Back to Rnomics Platform
            
                       Open Session

1 warning:

Access restricted to public data.
Please sign in at Rnomics Platform to access your data.

Navigation

Home

Sequences

Sequence SAT.jAug05

SAT.F3 (forward primer)
SAT.R6 (reverse primer)
Intron retention

Frame 0

EPGQCSNAQLLVAGRLVFIRHSPRFLGSWCQPD *EEDAPGRRMRNHLLLLFKYRGLVRKGKKSKRRK WLNS*SAQPLPPTAVTYCG*SRSWLNMNTWKNK *S*LKKIC*KMVLESTPFTTAWLQKCRKSTGLR KVTPRPFQKPERPSVMTQHCWFCHVLFYL*PVDW QVIVS*GLLRDE*L*RLWHRIRNSEESKPGCNE VSLQQHALLGSRME*TIHQLL*KKRCF*SVQ*R GLETVQDRQGVLAKNGNRGVRSAAVDDNLHSILE *IPNFSCFLCCL**NNRMSTHSKALLPVALLHV *NEVCLKWQSQMQFGESDLSP*ISFDKQQGGVI LIYLKKTSFS*VI*MCTMYTLVLRVSV*FFFNKL LFDLIVWCK

Frame 1

SRANVQMRSS*SRADWCLSVTRRGSLGHGASLT EKRTLPGDE*GTTSSYCSSTGAWSAKGRKAKDE NG*IRDPPSHCRRLQ*HTAADQGAG*I*IHGRTS NLN*KRSARRWFWRAPLLPLPGCRSAERALDSG R*PLALSRSQRDQVL*HSIVGFAMYYFTYDPWI GKLLYLEDFFVMSDYRGFGIGSEILKNLSQVAMR CRCSSMHFLVAEWNEPSINFYKRRGASDLSSEE GWRLFKIDKEYLLKMATEE*GVLL*MTTSILF* NKFPTSLAFYAVCSEIIE*APIPKLYYQWRCCMF EMRSV*SGNLRCSLESQIFLLEYLSINNKVV*S *YI*KKLHSRESFKCVQCTHWYLEFLFDSFLIN YSLI*LFGVS

Frame 2

AGPMFKCAALSRGPTGVYPSLAEVPWVMVPA*L RRGRSRETNEEPPPPTVQVQGPGPQREEKQKTK MAKFVIRPATAADCSDILRLIKELAKYEYMEEQ VILTEKDLLEDGFGEHPFYHCLVAEVPKEHWTPE GNPSPFPEARETKCYDTALLVLPCTILPMTRGL ASYCILRTSS**VIIEALA*DQKF*RI*ARLQ* GVAAAACTSW*QNGMNHPSTSIKEEVLLICPVKR VGDCSRSTRSTC*KWQQRSEECCCR*QPPFYFR INSQLLLLSMLFVVK**NEHPFQSFITSGVVAC LK*GLFKVAISDAVWRVRSFSLNIFR*TTRWCDL NIFEKNFILVSHLNVYNVHTGT*SFCLILF**T TL*FNCLV*A

Sequence SAT.bAug05

GAGCCGGGCCAATGTTCAAATGCGCAGCTCTTAGTCGCGGGCCGACTGGTGTTTATCCGTCACTCGCCGAGGTTCCTTGGGTCATGGTGCCAGCCTGACT GAGAAGAGGACGCTCCCGGGAGACGAATGAGGAACCACCTCCTCCTACTGTTCAAGTACAGGGGCCTGGTCCGCAAAGGGAAGAAAAGCAAAAGACGAAA ATGGCTAAATTCGTGATCCGCCCAGCCACTGCCGCCGACTGCAGTGACATACTGCGGCTGATCAAGGAGCTGGCTAAATATGAATACATGGAAGAACAAG TAATCTTAACTGAAAAAGGTAATTCAACAGTGGCGGGACGGGGGACAAGCGTTCGGTGCCTGTCACCTTCGCCAAGGCCATTACCGCCCCTGCTCCCCCT TCTTGCAGATCTGCTAGAAGATGGTTTTGGAGAGCACCCCTTTTACCACTGCCTGGTTGCAGAAGTGCCGAAAGAGCACTGGACTCCGGAAGGTAACCCC TCGCCCTTTCCAGAAGCCAGAGAGACCAAGTGTTATGTAAGAAGTAGTGTCGGCTGTGTAGAACCACTGACTACACAGGCCGAAGTTACTGAGAACTTGG ACAGAAAAAATAGCCAGCAAGTGTTCAAACTACTGAGGAAAAAAAAAAATTAGATATGCTGCACTTAAGAATACTAGGGCAGGTTAAAAGAGCTGTTTAA GTAAGTATCAGAGTGCTGTGGAGACTCGGAAGTGTTTAAGCTGCTTAAGTAAGTATAAGTGCTGTGGAGACCCGGAAGAGTTAGATATAATGTCATTTGT TGTAATTCAGTTTCATAAAATGGTTCTTGTTTGACCCTAACGTAACAGTTTTTGTAATTGTGTTAAATCACATTTTTTTCTTTAATTTGTCCCAATCTTC AGGTTACAGTCTCTAGCTTCGCCATGTACATGGCCCTTCCGTGTACATGGATGGGCGGGGAGGTAACTAAAAGATCCTTTACACAATAAAGTAGATGATC ATGATAAATGAGGTAAGGTCCTATTATCACACACTTCAAACACGGTAGATCAGAAACCCACTATGATACTCGCTTCCTGTCTGTTTGCTAAGGAATATAA AATGGCTAGAAAGTTTAATTTGAAACCTTTGCCTCCATTTGGAATAGTAGACACCAGTTAAGAGGGTGTCAGATGCCTTTTTTTTTTTTTTTTTTTTGGC TGGTCCCTGTTGATTGGTCAGAAGACAGCTCAGCTAAAAGGGGAAGTTGTCTGGGTGGTTGCTTTTTTTCTGACGTCTGTTCCTCAGGCTGGAAGAAATG AGCAGAAAACAAGGGATGAGTACTTTTTAGAGTATGTGCATGTTACGTAATACCTGTTTCTGGGCAATGCTGCTTCTTCTGACTCAACAAATGGGGAGAG CAAATTGAAAATGCGTAAATTGGAAGGCAAGTTCTGAAATTAAACGTTGTACTTTGGCCTGATGTTCTGACCTTTAAGGAAGCAAGAGTTTGTAAACTTC CAAATATTTACTATTCTGAACTGCCGTGTAAACCTGACGTATTCCCAAGTCAACATACCAGTATACCAATAGGATGTGAATAATGTGTGTGTTGAGTTTA AAACCATAGCAGTTTTGCTCTGGCAAGTAATGAAAGCGTTCTCGCTTCCTGAGTGTGAGCTCCAGCAGACTGCAGAGTGGCCAGTCCACAGTTGTAGCCT GACTTCAGTGAGTTCTGATGTGTGCTTTTTGCAAATACATGTTCTCAGAACAGTGAGATCATCCAGCAGTGGCCTGGACTGCACTCACATAAAAATCATG AGACAGCCATGGCTACTTGTTTCTGTAATACATGCATGTGTGTTTTTTAAAACCTATGATAGGCCTCTGATTCTGCAGCTGCAACTTTTATGGAATGTTT TCCTTCTCCACATCTCATGTGATGCTCTTATTACAGGACACAGCATTGTTGGTTTTGCCATGTACTATTTTACCTATGACCCGTGGATTGGCAAGTTATT GTATCTTGAGGACTTCTTCGTGATGAGTGATTATAGAGGCTTTGGCATAGGATCAGAAATTCTGAAGAATCTAAGCCAGGTTGCAATGAGGTGTCGCTGC AGCAGCATGCACTTCTTGGTAGCAGAATGGAATGAACCATCCATCAACTTCTATAAAAGAAGAGGTGCTTCTGATCTGTCCAGTGAAGAGGGTTGGAGAC TGTTCAAGATCGACAAGGAGTACTTGCTAAAAATGGCAACAGAGGAGTGAGGAGTGCTGCTGTAGATGACAACCTCCATTCTATTTTAGAATAAATTCCC AACTTCTCTTGCTTTCTATGCTGTTTGTAGTGAAATAATAGAATGAGCACCCATTCCAAAGCTTTATTACCAGTGGCGTTGTTGCATGTTTGAAATGAGG TCTGTTTAAAGTGGCAATCTCAGATGCAGTTTGGAGAGTCAGATCTTTCTCCTTGAATATCTTTCGATAAACAACAAGGTGGTGTGATCTTAATATATTT GAAAAAAACTTCATTCTCGTGAGTCATTTAAATGTGTACAATGTACACACTGGTACTTAGAGTTTCTGTTTGATTCTTTTTTAATAAACTACTCTTTGAT TTAATTGTTTGGTGTAAGCA

SAT.F3 (forward primer)
SAT.R6 (reverse primer)
Intron retention

Frame 0

EPGQCSNAQLLVAGRLVFIRHSPRFLGSWCQPD *EEDAPGRRMRNHLLLLFKYRGLVRKGKKSKRRK WLNS*SAQPLPPTAVTYCG*SRSWLNMNTWKNK *S*LKKVIQQWRDGGQAFGACHLRQGHYRPCSP FLQIC*KMVLESTPFTTAWLQKCRKSTGLRKVTP RPFQKPERPSVM*EVVSAV*NH*LHRPKLLRTW TEKIASKCSNY*GKKKIRYAALKNTRAG*KSCL SKYQSAVETRKCLSCLSKYKCCGDPEELDIMSFV VIQFHKMVLV*P*RNSFCNCVKSHFFL*FVPIF RLQSLASPCTWPFRVHGWAGR*LKDPLHNKVDD HDK*GKVLLSHTSNTVDQKPTMILASCLFAKEYK MARKFNLKPLPPFGIVDTS*EGVRCLFFFFFFG WSLLIGQKTAQLKGEVVWVVAFFLTSVPQAGRN EQKTRDEYFLEYVHVT*YLFLGNAASSDSTNGES KLKMRKLEGKF*N*TLYFGLMF*PLRKQEFVNF QIFTILNCRVNLTYSQVNIPVYQ*DVNNVCVEF KTIAVLLWQVMKAFSLPECELQQTAEWPVHSCSL TSVSSDVCFLQIHVLRTVRSSSSGLDCTHIKIM RQPWLLVSVIHACVFFKTYDRPLILQLQLLWNV FLLHISCDALITGHSIVGFAMYYFTYDPWIGKLL YLEDFFVMSDYRGFGIGSEILKNLSQVAMRCRC SSMHFLVAEWNEPSINFYKRRGASDLSSEEGWR LFKIDKEYLLKMATEE*GVLL*MTTSILF*NKFP TSLAFYAVCSEIIE*APIPKLYYQWRCCMFEMR SV*SGNLRCSLESQIFLLEYLSINNKVV*S*YI *KKLHSRESFKCVQCTHWYLEFLFDSFLINYSLI *LFGVS

Frame 1

SRANVQMRSS*SRADWCLSVTRRGSLGHGASLT EKRTLPGDE*GTTSSYCSSTGAWSAKGRKAKDE NG*IRDPPSHCRRLQ*HTAADQGAG*I*IHGRTS NLN*KR*FNSGGTGDKRSVPVTFAKAITAPAPP SCRSARRWFWRAPLLPLPGCRSAERALDSGR*P LALSRSQRDQVLCKK*CRLCRTTDYTGRSY*ELG QKK*PASVQTTEEKKKLDMLHLRILGQVKRAV* VSIRVLWRLGSV*AA*VSISAVETRKS*I*CHL L*FSFIKWFLFDPNVTVFVIVLNHIFFFNLSQSS GYSL*LRHVHGPSVYMDGRGGN*KILYTIK*MI MINEVRSYYHTLQTR*IRNPL*YSLPVCLLRNI KWLESLI*NLCLHLE**TPVKRVSDAFFFFFFLA GPC*LVRRQLS*KGKLSGWLLFF*RLFLRLEEM SRKQGMSTF*SMCMLRNTCFWAMLLLLTQQMGR AN*KCVNWKASSEIKRCTLA*CSDL*GSKSL*TS KYLLF*TAV*T*RIPKSTYQYTNRM*IMCVLSL KP*QFCSGK**KRSRFLSVSSSRLQSGQSTVVA *LQ*VLMCAFCKYMFSEQ*DHPAVAWTALT*KS* DSHGYLFL*YMHVCFLKPMIGL*FCSCNFYGMF SFSTSHVMLLLQDTALLVLPCTILPMTRGLASY CILRTSS**VIIEALA*DQKF*RI*ARLQ*GVAA AACTSW*QNGMNHPSTSIKEEVLLICPVKRVGD CSRSTRSTC*KWQQRSEECCCR*QPPFYFRINS QLLLLSMLFVVK**NEHPFQSFITSGVVACLK*G LFKVAISDAVWRVRSFSLNIFR*TTRWCDLNIF EKNFILVSHLNVYNVHTGT*SFCLILF**TTL* FNCLV*A

Frame 2

AGPMFKCAALSRGPTGVYPSLAEVPWVMVPA*L RRGRSRETNEEPPPPTVQVQGPGPQREEKQKTK MAKFVIRPATAADCSDILRLIKELAKYEYMEEQ VILTEKGNSTVAGRGTSVRCLSPSPRPLPPLLPL LADLLEDGFGEHPFYHCLVAEVPKEHWTPEGNP SPFPEARETKCYVRSSVGCVEPLTTQAEVTENL DRKNSQQVFKLLRKKKN*ICCT*EY*GRLKELFK *VSECCGDSEVFKLLK*V*VLWRPGRVRYNVIC CNSVS*NGSCLTLT*QFL*LC*ITFFSLICPNL QVTVSSFAMYMALPCTWMGGEVTKRSFTQ*SR*S **MR*GPIITHFKHGRSETHYDTRFLSVC*GI* NG*KV*FETFASIWNSRHQLRGCQMPFFFFFFW LVPVDWSEDSSAKRGSCLGGCFFSDVCSSGWKK* AENKG*VLFRVCACYVIPVSGQCCFF*LNKWGE QIENA*IGRQVLKLNVVLWPDVLTFKEARVCKL PNIYYSELPCKPDVFPSQHTSIPIGCE*CVC*V* NHSSFALASNESVLAS*V*APADCRVASPQL*P DFSEF*CVLFANTCSQNSEIIQQWPGLHSHKNH ETAMATCFCNTCMCVF*NL**ASDSAAATFMECF PSPHLM*CSYYRTQHCWFCHVLFYL*PVDWQVI VS*GLLRDE*L*RLWHRIRNSEESKPGCNEVSL QQHALLGSRME*TIHQLL*KKRCF*SVQ*RGLET VQDRQGVLAKNGNRGVRSAAVDDNLHSILE*IP NFSCFLCCL**NNRMSTHSKALLPVALLHV*NE VCLKWQSQMQFGESDLSP*ISFDKQQGGVILIYL KKTSFS*VI*MCTMYTLVLRVSV*FFFNKLLFD LIVWCK