Sequences - Rnomics 📊 Palace

        ☰
    
        Rnomics 📊 Palace
    
                       Back to Rnomics Platform
            
                       Open Session

1 warning:

Access restricted to public data.
Please sign in at Rnomics Platform to access your data.

Navigation

Home

Sequences

Sequence DDR1.nAug05

ATCCTGCTCCTGCTGCTCATCATTGCCCTCATGCTCTGGCGGCTGCACTGGCGCAGGCTCCTCAGCAAGGTCCTAGAGAGCCACCCCCGTACCAGGAGCC CCGGCCTCGTGGGAATCCGCCCCACTCCGCTCCCTGTGTCCCCAATGGCTCTGGTGCACCTGTGTGAGGTCGACAGCCCTCAAGAT

DDR1.F1 (forward primer)
DDR1.R1 (reverse primer)
Multiple exon skipping

Frame 0

ILLLLLIIALMLWRLHWRRLLSKVLESHPRTRS PGLVGIRPTPLPVSPMALVHLCEVDSPQD

Frame 1

SCSCCSSLPSCSGGCTGAGSSARS*RATPVPGA PASWESAPLRSLCPQWLWCTCVRSTALK

Frame 2

PAPAAHHCPHALAAALAQAPQQGPREPPPYQEP RPRGNPPHSAPCVPNGSGAPV*GRQPSR

Sequence DDR1.mAug05

ATCCTGCTCCTGCTGCTCATCATTGCCCTCATGCTCTGGCGGCTGCACTGGCGCAGGCTCCTCAGCAAGGCTGAACGGAGGGTGTTGGAAGAGGAGCTGA CGGTTCACCTCTCTGTCCCTGGGGACACTATCCTCATCAACAACCGCCCAGGTCCTAGAGAGCCACCCCCGTACCAGGAGCCCCGGCCTCGTGGGAATCC GCCCCACTCCGCTCCCTGTGTCCCCAATGGCTCTGGTGCACCTGTGTGAGGTCGACAGCCCTCAAGAT

DDR1.F1 (forward primer)
DDR1.R1 (reverse primer)
Multiple exon skipping

Frame 0

ILLLLLIIALMLWRLHWRRLLSKAERRVLEEEL TVHLSVPGDTILINNRPGPREPPPYQEPRPRGNP PHSAPCVPNGSGAPV*GRQPSR

Frame 1

SCSCCSSLPSCSGGCTGAGSSARLNGGCWKRS* RFTSLSLGTLSSSTTAQVLESHPRTRSPGLVGI RPTPLPVSPMALVHLCEVDSPQD

Frame 2

PAPAAHHCPHALAAALAQAPQQG*TEGVGRGAD GSPLCPWGHYPHQQPPRS*RATPVPGAPASWES APLRSLCPQWLWCTCVRSTALK

Sequence DDR1.hAug05

CTAGATTCCCCAGCTGCTGTTCTCTGGAGGGAGATGCTGCCCCCACCCCCTTAGGCCCGAGGGATCAGGAGCTATGGGACCAGAGGCCCTGTCATCTTTA CTGCTGCTGCTCTTGGTGGCAAGTGGAGATGCTGACATGAAGGGACATTTTGATCCTGCCAAGTGCCGCTATGCCCTGGGCATGCAGGACCGGACCATCC CAGACAGTGACATCTCTGCTTCCAGCTCCTGGTCAGATTCCACTGCCGCCCGCCACAGCAGGTTGGAGAGCAGTGACGGGGATGGGGCCTGGTGCCCCGC AGGGTCGGTGTTTCCCAAGGAGGAGGAGTACTTGCAGGTGGATCTACAACGACTGCACCTGGTGGCTCTGGTGGGCACCCAGGGACGGCATGCCGGGGGC CTGGGCAAGGAGTTCTCCCGGAGCTACCGGCTGCGTTACTCCCGGGATGGTCGCCGCTGGATGGGCTGGAAGGACCGCTGGGGTCAGGAGGTGATCTCAG GCAATGAGGACCCTGAGGGAGTGGTGCTGAAGGACCTTGGGCCCCCCATGGTTGCCCGACTGGTTCGCTTCTACCCCCGGGCTGACCGGGTCATGAGCGT CTGTCTGCGGGTAGAGCTCTATGGCTGCCTCTGGAGGGACTGGAGGATGGACTCCTGTCTTACACCGCCCCTGTGGGGCAGACAATGTATTTATCTGAGG CCGTGTACCTCAACGACTCCACCTATGACGGACATACCGTGGGCGGACTGCAGTATGGGGGTCTGGGCCAGCTGGCAGATGGTGTGGTGGGGCTGGATGA CTTTAGGAAGAGTCAGGAGCTGCGGGTCTGGCCAGGCTATGACTATGTGGGATGGAGCAACCACAGCTTCTCCAGTGGCTATGTGGAGATGGAGTTTGAG TTTGACCGGCTGAGGGCCTTCCAGGCTATGCAGGTCCACTGTAACAACATGCACACGCTGGGAGCCCGTCTGCCTGGCGGGGTGGAATGTCGCTTCCGGC GTGGCCCTGCCATGGCCTGGGAGGGGGAGCCCATGCGCCACAACCTAGGGGGCAACCTGGGGGACCCCAGAGCCCGGGCTGTCTCAGTGCCCCTTGGCGG CCGTGTGGCTCGCTTTCTGCAGTGCCGCTTCCTCTTTGCGGGGCCCTGGTTACTCTTCAGCGAAATCTCCTTCATCTCTGATGTGGTGAACAATTCCTCT CCGGCACTGGGAGGCACCTTCCCGCCAGCCCCCTGGTGGCCGCCTGGCCCACCTCCCACCAACTTCAGCAGCTTGGAGCTGGAGCCCAGAGGCCAGCAGC CCGTGGCCAAGGCCGAGGGGAGCCCGACCGCCATCCTCATCGGCTGCCTGGTGGCCATCATCCTGCTCCTGCTGCTCATCATTGCCCTCATGCTCTGGCG GCTGCACTGGCGCAGGCTCCTCAGCAAGGTCCTAGAGAGCCACCCCCGTACCAGGAGCCCCGGCCTCGTGGGAATCCGCCCCACTCCGCTCCCTGTGTCC CCAATGGCTCTGCGTTGCTGCTCTCCAATCCAGCCTACCGCCTCCTTCTGGCCACTTACGCCCGTCCCCCTCGAGGCCCGGGCCCCCCCACACCCGCCTG GGCCAAACCCACCAACACCCAGGGGCGTCACCGGGGGCAACACCTATGCTGTGCCTGCACTGCCCCCAGGGGCAGTCGGGGATGGGCCCCCCAGAGTGGA TTTCCCTCGATCTCGACTCCGCTTCAAGGAGAAGCTTGGCGAGGGCCAGTTTGGGGAGGTGCACCTGTGTGAGGTCGACAGCCCTCAAGATCTGGTTAGT CTTGATTTCCCCCTTAATGTGCGTAAGGGACACCCTTTGCTGGTAGCTGTCAAGATCTTACGGCCAGATGCCACCAAGAATGCCAGGAATGATTTCCTGA AAGAGGTGAAGATCATGTCGAGGCTCAAGGACCCAAACATCATTCGGCTGCTGGGCGTGTGTGTGCAGGACGACCCCCTCTGCATGATTACTGACTACAT GGAGAACGGCGACCTCAACCAGTTCCTCAGTGCCCACCAGCTGGAGGACAAGGCAGCCGAGGGGGCCCCTGGGGACGGGCAGGCTGCGCAGGGGCCCACC ATCAGCTACCCAATGCTGCTGCATGTGGCAGCCCAGATCGCCTCCGGCATGCGCTATCTGGCCACACTCAACTTTGTACATTTTTGGGGGGAGAGACACA GATTTTTACACTAATATATGGACCTAGCTTGAGGCAATTTTAATCCCCTGCACTAGGCAGGTAATAATAAAGGTTGAGTTTTCCACAACTGTGTGAGTGG GTTCCTTGGGAATTTGGTAACTCTGCCTCCTGCACCTCCCTCTGAACCCACTTCCCAACCCACTTCCCATCTTCCTTTTTTCCTGCCTCCTCATTCCATT TCCCATCACCTGTTTTGCCCAGCATTGTGTTCTGTTTCTGGATAATCCAGGCCTTTGCCTGTGGGACCTCAGGAGATGCATGAATGTCTGAGTGCATGAA CCTTCTCAACTCAGAGGGGTGCTCTGGTGGAGGCCTGGAAGGAATGCAGTCAGGCCAGGGGTGCTGAACCTTTTTTGTGCCATAAACGCCTTTGGCAGTC TGTAGAGGTCTACTGAGTCCTCCTCAGAATTAGGTTTTAAAACCTATAAAATGGACCAGGCATAGTGGCTCACCCCTGTAATCCCAGCACTTTGGGAGGC TGAGGTGGGTAGATCACTTGAGGCCAGGAGTTCGAGACCAACCTGGCCAACATAGCAAAACCCCATCTCTACTAAAGATACAAAAATTAGCAGGGTGTGG TGGCATGCGCCTGTAATCTCAGCTATTCAGGAGGCTGAGGCAGGAGAATTGCTTAGAACCCGGGAGGTGGGGGTTGCAGTGAGCTGAGATCACACAACTG TGCTCCAGCCTGGGCAACAGAGTGAGACTGTCTCAAAAACAGAACAACAACAACAACAAAACCCATAAAATGTATAGGATTATAAGGGAAACCAATGGAA ACAGTTTACCAAAATGCTAAAAAATTATGAAACTAATGTGCTTCTTTTTCATGTATTTAATAACAAGATCTAAAAACAGGTGTAATAAACTGACATTTTC CAAATACTA

DDR1.F1 (forward primer)
DDR1.R1 (reverse primer)
Multiple exon skipping

Frame 0

LDSPAAVLWREMLPPPP*ARGIRSYGTRGPVIF TAAALGGKWRC*HEGTF*SCQVPLCPGHAGPDHP RQ*HLCFQLLVRFHCRPPQQVGEQ*RGWGLVPR RVGVSQGGGVLAGGSTTTAPGGSGGHPGTACRG PGQGVLPELPAALLPGWSPLDGLEGPLGSGGDLR Q*GP*GSGAEGPWAPHGCPTGSLLPPG*PGHER LSAGRALWLPLEGLEDGLLSYTAPVGQTMYLSE AVYLNDSTYDGHTVGGLQYGGLGQLADGVVGLDD FRKSQELRVWPGYDYVGWSNHSFSSGYVEMEFE FDRLRAFQAMQVHCNNMHTLGARLPGGVECRFR RGPAMAWEGEPMRHNLGGNLGDPRARAVSVPLGG RVARFLQCRFLFAGPWLLFSEISFISDVVNNSS PALGGTFPPAPWWPPGPPPTNFSSLELEPRGQQ PVAKAEGSPTAILIGCLVAIILLLLLIIALMLWR LHWRRLLSKVLESHPRTRSPGLVGIRPTPLPVS PMALRCCSPIQPTASFWPLTPVPLEARAPPHPP GPNPPTPRGVTGGNTYAVPALPPGAVGDGPPRVD FPRSRLRFKEKLGEGQFGEVHLCEVDSPQDLVS LDFPLNVRKGHPLLVAVKILRPDATKNARNDFL KEVKIMSRLKDPNIIRLLGVCVQDDPLCMITDYM ENGDLNQFLSAHQLEDKAAEGAPGDGQAAQGPT ISYPMLLHVAAQIASGMRYLATLNFVHFWGERH RFLH*YMDLA*GNFNPLH*AGNNKG*VFHNCVSG FLGNLVTLPPAPPSEPTSQPTSHLPFFLPPHSI SHHLFCPALCSVSG*SRPLPVGPQEMHECLSA* TFSTQRGALVEAWKECSQARGAEPFLCHKRLWQS VEVY*VLLRIRF*NL*NGPGIVAHPCNPSTLGG *GG*IT*GQEFETNLANIAKPHLY*RYKN*QGV VACACNLSYSGG*GRRIA*NPGGGGCSELRSHNC APAWATE*DCLKNRTTTTTKPIKCIGL*GKPME TVYQNAKKL*N*CASFSCI**QDLKTGVIN*HF PNT

Frame 1

*IPQLLFSGGRCCPHPLRPEGSGAMGPEALSSL LLLLLVASGDADMKGHFDPAKCRYALGMQDRTI PDSDISASSSWSDSTAARHSRLESSDGDGAWCPA GSVFPKEEEYLQVDLQRLHLVALVGTQGRHAGG LGKEFSRSYRLRYSRDGRRWMGWKDRWGQEVIS GNEDPEGVVLKDLGPPMVARLVRFYPRADRVMSV CLRVELYGCLWRDWRMDSCLTPPLWGRQCIYLR PCTSTTPPMTDIPWADCSMGVWASWQMVWWGWM TLGRVRSCGSGQAMTMWDGATTASPVAMWRWSLS LTG*GPSRLCRSTVTTCTRWEPVCLAGWNVASG VALPWPGRGSPCATT*GATWGTPEPGLSQCPLA AVWLAFCSAASSLRGPGYSSAKSPSSLMW*TIPL RHWEAPSRQPPGGRLAHLPPTSAAWSWSPEASS PWPRPRGARPPSSSAAWWPSSCSCCSSLPSCSG GCTGAGSSARS*RATPVPGAPASWESAPLRSLCP QWLCVAALQSSLPPPSGHLRPSPSRPGPPHTRL GQTHQHPGASPGATPMLCLHCPQGQSGMGPPEW ISLDLDSASRRSLARASLGRCTCVRSTALKIWLV LISPLMCVRDTLCW*LSRSYGQMPPRMPGMIS* KR*RSCRGSRTQTSFGCWACVCRTTPSA*LLTT WRTATSTSSSVPTSWRTRQPRGPLGTGRLRRGPP SATQCCCMWQPRSPPACAIWPHSTLYIFGGRDT DFYTNIWT*LEAILIPCTRQVIIKVEFSTTV*V GSLGIW*LCLLHLPLNPLPNPLPIFLFSCLLIPF PITCFAQHCVLFLDNPGLCLWDLRRCMNV*VHE PSQLRGVLWWRPGRNAVRPGVLNLFCAINAFGS L*RSTESSSELGFKTYKMDQA*WLTPVIPALWEA EVGRSLEARSSRPTWPT*QNPISTKDTKISRVW WHAPVISAIQEAEAGELLRTREVGVAVS*DHTT VLQPGQQSETVSKTEQQQQQNP*NV*DYKGNQWK QFTKMLKNYETNVLLFHVFNNKI*KQV**TDIF QIL

Frame 2

RFPSCCSLEGDAAPTPLGPRDQELWDQRPCHLY CCCSWWQVEMLT*RDILILPSAAMPWACRTGPS QTVTSLLPAPGQIPLPPATAGWRAVTGMGPGAP QGRCFPRRRSTCRWIYNDCTWWLWWAPRDGMPGA WARSSPGATGCVTPGMVAAGWAGRTAGVRR*SQ AMRTLREWC*RTLGPPWLPDWFASTPGLTGS*A SVCG*SSMAASGGTGGWTPVLHRPCGADNVFI*G RVPQRLHL*RTYRGRTAVWGSGPAGRWCGGAG* L*EESGAAGLARL*LCGMEQPQLLQWLCGDGV* V*PAEGLPGYAGPL*QHAHAGSPSAWRGGMSLPA WPCHGLGGGAHAPQPRGQPGGPQSPGCLSAPWR PCGSLSAVPLPLCGALVTLQRNLLHL*CGEQFL SGTGRHLPASPLVAAWPTSHQLQQLGAGAQRPAA RGQGRGEPDRHPHRLPGGHHPAPAAHHCPHALA AALAQAPQQGPREPPPYQEPRPRGNPPHSAPCV PNGSALLLSNPAYRLLLATYARPPRGPGPPTPAW AKPTNTQGRHRGQHLCCACTAPRGSRGWAPQSG FPSISTPLQGEAWRGPVWGGAPV*GRQPSRSG* S*FPP*CA*GTPFAGSCQDLTARCHQECQE*FPE RGEDHVEAQGPKHHSAAGRVCAGRPPLHDY*LH GERRPQPVPQCPPAGGQGSRGGPWGRAGCAGAH HQLPNAAACGSPDRLRHALSGHTQLCTFLGGETQ IFTLIYGPSLRQF*SPALGR***RLSFPQLCEW VPWEFGNSASCTSL*THFPTHFPSSFFPASSFH FPSPVLPSIVFCFWIIQAFACGTSGDA*MSECMN LLNSEGCSGGGLEGMQSGQGC*TFFVP*TPLAV CRGLLSPPQN*VLKPIKWTRHSGSPL*SQHFGR LRWVDHLRPGVRDQPGQHSKTPSLLKIQKLAGCG GMRL*SQLFRRLRQENCLEPGRWGLQ*AEITQL CSSLGNRVRLSQKQNNNNNKTHKMYRIIRETNG NSLPKC*KIMKLMCFFFMYLITRSKNRCNKLTFS KY