×
1 warning:
  • Access restricted to public data.
    Please sign in at Rnomics Platform to access your data.
Navigation
Sequences

Sequence FGFR3.cAug05

CGCGCGCTGCCTGAGGACGCCGCGGCCCCCGCCCCCGCCATGGGCGCCCCTGCCTGCGCCCTCGCGCTCTGCGTGGCCGTGGCCATCGTGGCCGGCGCCT
CCTCGGAGTCCTTGGGGACGGAGCAGCGCGTCGTGGGGCGAGCGGCAGAAGTCCCGGGCCCAGAGCCCGGCCAGCAGGAGCAGTTGGTCTTCGGCAGCGG
GGATGCTGTGGAGCTGAGCTGTCCCCCGCCCGGGGGTGGTCCCATGGGGCCCACTGTCTGGGTCAAGGATGGCACAGGGCTGGTGCCCTCGGAGCGTGTC
CTGGTGGGGCCCCAGCGGCTGCAGGTGCTGAATGCCTCCCACGAGGACTCCGGGGCCTACAGCTGCCGGCAGCGGCTCACGCAGCGCGTACTGTGCCACT
TCAGTGTGCGGGTGACAGACGCTCCATCCTCGGGAGATGACGAAGACGGGGAGGACGAGGCTGAGGACACAGGTGTGGACACAGGGGCCCCTTACTGGAC
ACGGCCCGAGCGGATGGACAAGAAGCTGCTGGCCGTGCCGGCCGCCAACACCGTCCGCTTCCGCTGCCCAGCCGCTGGCAACCCCACTCCCTCCATCTCC
TGGCTGAAGAACGGCAGGGAGTTCCGCGGCGAGCACCGCATTGGAGGCATCAAGCTGCGGCATCAGCAGTGGAGCCTGGTCATGGAAAGCGTGGTGCCCT
CGGACCGCGGCAACTACACCTGCGTCGTGGAGAACAAGTTTGGCAGCATCCGGCAGACGTACACGCTGGACGTGCTGGAGCGCTCCCCGCACCGGCCCAT
CCTGCAGGCGGGGCTGCCGGCCAACCAGACGGCGGTGCTGGGCAGCGACGTGGAGTTCCACTGCAAGGTGTACAGTGACGCACAGCCCCACATCCAGTGG
CTCAAGCACGTGGAGGTGAATGGCAGCAAGGTGGGCCCGGACGGCACACCCTACGTTACCGTGCTCAAGGTGTCCCTGGAGTCCAACGCGTCCATGAGCT
CCAACACACCAC
TGGTGCGCATCGCAAGGCTGTCCTCAGGGGAGGGCCCCACGCTGGCCAATGTCTCCGAGCTCGAGCTGCCTGCCGACCCCAAATGGGA
GCTGTCTCGGGCCCGGCTGACCCTGGGCAAGCCCCTTGGGGAGGGCTGCTTCGGCCAGGTGGTCATGGCGGAGGCCATCGGCATTGACAAGGACCGGGCC
GCCAAGCCTGTCACCGTAGCCGTGAAGATGCTGAAAGACGATGCCACTGACAAGGACCTGTCGGACCTGGTGTCTGAGATGGAGATGATGAAGATGATCG
GGAAACACAAAAACATCATCAACCTGCTGGGCGCCTGCACGCAGGGCGGGCCCCTGTACGTGCTGGTGGAGTACGCGGCCAAGGGTAACCTGCGGGAGTT
TCTGCGGGCGCGGCGGCCCCCGGGCCTGGACTACTCCTTCGACACCTGCAAGCCGCCCGAGGAGCAGCTCACCTTCAAGGACCTGGTGTCCTGTGCCTAC
CAGGTGGCCCGGGGCATGGAGTACTTGGCCTCCCAGAAGTGCATCCACAGGGACCTGGCTGCCCGCAATGTGCTGGTGACCGAGGACAACGTGATGAAGA
TCGCAGACTTCGGGCTGGCCCGGGACGTGCACAACCTCGACTACTACAAGAAGACGACCAACGGCCGGCTGCCCGTGAAGTGGATGGCGCCTGAGGCCTT
GTTTGACCGAGTCTACACTCACCAGAGTGACGTCTGGTCCTTTGGGGTCCTGCTCTGGGAGATCTTCACGCTGGGGGGCTCCCCGTACCCCGGCATCCCT
GTGGAGGAGCTCTTCAAGCTGCTGAAGGAGGGCCACCGCATGGACAAGCCCGCCAACTGCACACACGACCTGTACATGATCATGCGGGAGTGCTGGCATG
CCGCGCCCTCCCAGAGGCCCACCTTCAAGCAGCTGGTGGAGGACCTGGACCGTGTCCTTACCGTGACGTCCACCGACGAGTACCTGGACCTGTCGGCGCC
TTTCGAGCAGTACTCCCCGGGTGGCCAGGACACCCCCAGCTCCAGCTCCTCAGGGGACGACTCCGTGTTTGCCCACGACCTGCTGCCCCCGGCCCCACCC
AGCAGTGGGGGCTCGCGGACGTGAAGGGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTGCACAGCCACTCCCCGGCA
TGAGACTCAGTGCAGATGGAGAGACAGCTACACAGAGCTTTGGTCTGTGTGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGCACATCCGCGTGTGCCTGT
GTGCGTGCGCATCTTGCCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTGACTGGTGCTGCAGCACCGAGGGGCCTTTGT
TCTGGGGGGACCCAGTGCAGAATGTAAGTGGGCCCACCCGGTGGGACCCCCGTGGGGCAGGGAGCTGGGCCCGACATGGCTCCGGCCTCTGCCTTTGCAC
CACGGGACATCACAGGGTGGGCCTCGGCCCCTCCCACACCCAAAGCTGAGCCTGCAGGGAAGCCCCACATGTCCAGCACCTTGTGCCTGGGGTGTTAGTG
GCACCGCCTCCCCACCTCCAGGCTTTCCCACTTCCCACCCTGCCCCTCAGAGACTGAAATTACGGGTACCTGAAGATGGGAGCCTTTACCTTTTATGCAA
AAGGTTTATTCCGGAAACTAGTGTACATTTCTATAAATAGATGCTGTGTATATGGTATATATACATATATATATATAACATATATGGAAGAGGAAAAGGC
TGGTACAACGGAGGCCTGCGACCCTGGGGGCACAGGAGGCAGGCATGGCCCTGGGCGGGGCGTGGGGGGGCGTGGAGGGAGGCCCCAGGGGGTCTCACCC
ATGCAAGCAGAGGACCAGGGCCTTTTCTGGCACCGCAGTTTTGTTTTAAAACTGGACCTGTATATTTGTAAAGCTATTTATGGGCCCCTGGCACTCTTGT
TCCCACACCCCAACACTTCCAGCATTTAGCTGGCCACATGGCGGAGAGTTTTAATTTTTAACTTATTGACAACCGAGAAGGTTTATCCCGCCGATAGAGG
GACGGCCAAGAATGTACGTCCAGCCTGCCCCGGAGCTGGAGGATCCCCTCCAAGCCTAAAAGGTTGTTAATAGTTGGAGGTGATTCCAGTGAAGATATTT
TATTTCCTTTGTCCTTTTTCAGGAGAATTAGATTTCTATAGGATTTTTCTTTAGGAGATTTATTTTTTGGACTTCAAAGCAAGCTGGTATTTTCATACAA
ATTCTTCTAATTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCCCTGTGTGCAGGTTCCGATGTTATTAGATGTTACAAGTTTATA
TATATCTATATATATAATTTATTGAGTTTTTACAAGATGTATTTGTTGTAGACTTAACACTTCTTACGCAATGCTTCTAGAGTTTTATAGCCTGGACTGC
TACCTTTCAAAGCTTGGAGGGAAGCCGTGAATTCAGTTGGTTCGTTCTGTACTGTTACTGGGCCCTGAGTCTGGGCAGCTGTCCCTTGCTTGCCTGCAGG
GCCATGGCTCAGGGTGGTCTCTTCTTGGGGCCCAGTGCATGGTGGCCAGAGGTGTCACCCAAACCGGCAGGTGCGATTTTGTTAACCCAGCGACGAACTT
TCCGAAAAATAAAGACACCTGGTTGCTAACCTGG
  • FGFR3.F3 (forward primer)
  • FGFR3.R3 (reverse primer)
  • Exon skipping and alternative donor or acceptor

Frame 0

RALPEDAAAPAPAMGAPACALALCVAVAIVAGA
SSESLGTEQRVVGRAAEVPGPEPGQQEQLVFGSG
DAVELSCPPPGGGPMGPTVWVKDGTGLVPSERV
LVGPQRLQVLNASHEDSGAYSCRQRLTQRVLCH
FSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWT
RPERMDKKLLAVPAANTVRFRCPAAGNPTPSIS
WLKNGREFRGEHRIGGIKLRHQQWSLVMESVVP
SDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPI
LQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQW
LKHVEVNGSKVGPDGTPYVTVLKVSLESNASMS
SNTP
LVRIARLSSGEGPTLANVSELELPADPKWE
LSRARLTLGKPLGEGCFGQVVMAEAIGIDKDRA
AKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMI
GKHKNIINLLGACTQGGPLYVLVEYAAKGNLREF
LRARRPPGLDYSFDTCKPPEEQLTFKDLVSCAY
QVARGMEYLASQKCIHRDLAARNVLVTEDNVMK
IADFGLARDVHNLDYYKKTTNGRLPVKWMAPEAL
FDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP
VEELFKLLKEGHRMDKPANCTHDLYMIMRECWH
AAPSQRPTFKQLVEDLDRVLTVTSTDEYLDLSAP
FEQYSPGGQDTPSSSSSGDDSVFAHDLLPPAPP
SSGGSRT*RATGPQQCEGSLAAHPAAGAQPLPG
MRLSADGETATQSFGLCVCVCVCVCVCAHPRVPV
CVRILPPGAEVPWVSPLLCNGLLTGAAAPRGLC
SGGTQCRM*VGPPGGTPVGQGAGPDMAPASAFA
PRDITGWASAPPTPKAEPAGKPHMSSTLCLGC*W
HRLPTSRLSHFPPCPSETEITGT*RWEPLPFMQ
KVYSGN*CTFL*IDAVYMVYIHIYI*HIWKRKR
LVQRRPATLGAQEAGMALGGAWGGVEGGPRGSHP
CKQRTRAFSGTAVLF*NWTCIFVKLFMGPWHSC
SHTPTLPAFSWPHGGEF*FLTY*QPRRFIPPIE
GRPRMYVQPAPELEDPLQA*KVVNSWR*FQ*RYF
ISFVLFQEN*ISIGFFFRRFIFWTSKQAGIFIQ
ILLIAVCPRQGDGFQGGAGPVCRFRCY*MLQVY
IYLYI*FIEFLQDVFVVDLTLLTQCF*SFIAWTA
TFQSLEGSREFSWFVLYCYWALSLGSCPLLACR
AMAQGGLFLGPSAWWPEVSPKPAGAILLTQRRT
FRKIKTPGC*P

Frame 1

ARCLRTPRPPPPPWAPLPAPSRSAWPWPSWPAP
PRSPWGRSSASWGERQKSRAQSPASRSSWSSAA
GMLWS*AVPRPGVVPWGPLSGSRMAQGWCPRSVS
WWGPSGCRC*MPPTRTPGPTAAGSGSRSAYCAT
SVCG*QTLHPREMTKTGRTRLRTQVWTQGPLTG
HGPSGWTRSCWPCRPPTPSASAAQPLATPLPPSP
G*RTAGSSAASTALEASSCGISSGAWSWKAWCP
RTAATTPASWRTSLAASGRRTRWTCWSAPRTGP
SCRRGCRPTRRRCWAATWSSTARCTVTHSPTSSG
SSTWR*MAARWARTAHPTLPCSRCPWSPTRP*A
PTHH
WCASQGCPQGRAPRWPMSPSSSCLPTPNG
SCLGPG*PWASPLGRAASARWSWRRPSALTRTGP
PSLSP*P*RC*KTMPLTRTCRTWCLRWR**R*S
GNTKTSSTCWAPARRAGPCTCWWSTRPRVTCGS
FCGRGGPRAWTTPSTPASRPRSSSPSRTWCPVPT
RWPGAWSTWPPRSASTGTWLPAMCW*PRTT**R
SQTSGWPGTCTTSTTTRRRPTAGCP*SGWRLRP
CLTESTLTRVTSGPLGSCSGRSSRWGAPRTPASL
WRSSSSC*RRATAWTSPPTAHTTCT*SCGSAGM
PRPPRGPPSSSWWRTWTVSLP*RPPTSTWTCRR
LSSSTPRVARTPPAPAPQGTTPCLPTTCCPRPHP
AVGARGREGPLVPNNVRGP*QPTLLLVHSHSPA
*DSVQMERQLHRALVCVCVCACVCVCVHIRVCL
CACASCLQVQRYPGCPRCCATVS*LVLQHRGAFV
LGGPSAECKWAHPVGPPWGRELGPTWLRPLPLH
HGTSQGGPRPLPHPKLSLQGSPTCPAPCAWGVS
GTASPPPGFPTSHPAPQRLKLRVPEDGSLYLLCK
RFIPETSVHFYK*MLCIWYIYIYIYNIYGRGKG
WYNGGLRPWGHRRQAWPWAGRGGAWREAPGGLT
HASRGPGPFLAPQFCFKTGPVYL*SYLWAPGTLV
PTPQHFQHLAGHMAESFNF*LIDNREGLSRR*R
DGQECTSSLPRSWRIPSKPKRLLIVGGDSSEDI
LFPLSFFRRIRFL*DFSLGDLFFGLQSKLVFSYK
FF*LLCVPGRETVSREGPALCAGSDVIRCYKFI
YIYIYNLLSFYKMYLL*T*HFLRNASRVL*PGL
LPFKAWREAVNSVGSFCTVTGP*VWAAVPCLPAG
PWLRVVSSWGPVHGGQRCHPNRQVRFC*PSDEL
SEK*RHLVANL

Frame 2

RAA*GRRGPRPRHGRPCLRPRALRGRGHRGRRL
LGVLGDGAARRGASGRSPGPRARPAGAVGLRQR
GCCGAELSPARGWSHGAHCLGQGWHRAGALGAC
PGGAPAAAGAECLPRGLRGLQLPAAAHAARTVPL
QCAGDRRSILGR*RRRGGRG*GHRCGHRGPLLD
TARADGQEAAGRAGRQHRPLPLPSRWQPHSLHL
LAEERQGVPRRAPHWRHQAAASAVEPGHGKRGAL
GPRQLHLRRGEQVWQHPADVHAGRAGALPAPAH
PAGGAAGQPDGGAGQRRGVPLQGVQ*RTAPHPV
AQARGGEWQQGGPGRHTLRYRAQGVPGVQRVHEL
QHTT
GAHRKAVLRGGPHAGQCLRARAACRPQMG
AVSGPADPGQAPWGGLLRPGGHGGGHRH*QGPG
RQACHRSREDAERRCH*QGPVGPGV*DGDDEDDR
ETQKHHQPAGRLHAGRAPVRAGGVRGQG*PAGV
SAGAAAPGPGLLLRHLQAARGAAHLQGPGVLCL
PGGPGHGVLGLPEVHPQGPGCPQCAGDRGQRDED
RRLRAGPGRAQPRLLQEDDQRPAAREVDGA*GL
V*PSLHSPE*RLVLWGPALGDLHAGGLPVPRHP
CGGALQAAEGGPPHGQARQLHTRPVHDHAGVLAC
RALPEAHLQAAGGGPGPCPYRDVHRRVPGPVGA
FRAVLPGWPGHPQLQLLRGRLRVCPRPAAPGPT
QQWGLADVKGHWSPTM*GVPSSPPCCWCTATPRH
ETQCRWRDSYTELWSVCVCVRVCVCVCTSACAC
VRAHLASRCRGTLGVPAAVQRSPDWCCSTEGPL
FWGDPVQNVSGPTRWDPRGAGSWARHGSGLCLCT
TGHHRVGLGPSHTQS*ACREAPHVQHLVPGVLV
APPPHLQAFPLPTLPLRD*NYGYLKMGAFTFYA
KGLFRKLVYISINRCCVYGIYTYIYITYMEEEKA
GTTEACDPGGTGGRHGPGRGVGGRGGRPQGVSP
MQAEDQGLFWHRSFVLKLDLYICKAIYGPLALL
FPHPNTSSI*LATWRRVLIFNLLTTEKVYPADRG
TAKNVRPACPGAGGSPPSLKGC**LEVIPVKIF
YFLCPFSGELDFYRIFL*EIYFLDFKASWYFHT
NSSNCCVSQAGRRFPGRGRPCVQVPMLLDVTSLY
ISIYIIY*VFTRCICCRLNTSYAMLLEFYSLDC
YLSKLGGKP*IQLVRSVLLLGPESGQLSLACLQ
GHGSGWSLLGAQCMVARGVTQTGRCDFVNPATNF
PKNKDTWLLTW

Sequence FGFR3.aAug05

GCGGCGTCGCGGGCAGCTGGCGCCGCGCGGTCCTGCTCTGCCGGTCGCACGGACGCACCGGCGGGCCGCCGGCCGGAGGGACGGGGCGGGAGCTGGGCCC
GCGGACAGCGAGCCGGAGCGGGAGCCGCGCGTAGCGAGCCGGGCTCCGGCGCTCGCCAGTCTCCCGAGCGGCGCCCGCCTCCCGCCGGTGCCCGCGCCGG
GCCGTGGGGGGCAGCATGCCCGCGCGCGCTGCCTGAGGACGCCGCGGCCCCCGCCCCCGCCATGGGCGCCCCTGCCTGCGCCCTCGCGCTCTGCGTGGCC
GTGGCCATCGTGGCCGGCGCCTCCTCGGAGTCCTTGGGGACGGAGCAGCGCGTCGTGGGGCGAGCGGCAGAAGTCCCGGGCCCAGAGCCCGGCCAGCAGG
AGCAGTTGGTCTTCGGCAGCGGGGATGCTGTGGAGCTGAGCTGTCCCCCGCCCGGGGGTGGTCCCATGGGGCCCACTGTCTGGGTCAAGGATGGCACAGG
GCTGGTGCCCTCGGAGCGTGTCCTGGTGGGGCCCCAGCGGCTGCAGGTGCTGAATGCCTCCCACGAGGACTCCGGGGCCTACAGCTGCCGGCAGCGGCTC
ACGCAGCGCGTACTGTGCCACTTCAGTGTGCGGGTGACAGACGCTCCATCCTCGGGAGATGACGAAGACGGGGAGGACGAGGCTGAGGACACAGGTGTGG
ACACAGGGGCCCCTTACTGGACACGGCCCGAGCGGATGGACAAGAAGCTGCTGGCCGTGCCGGCCGCCAACACCGTCCGCTTCCGCTGCCCAGCCGCTGG
CAACCCCACTCCCTCCATCTCCTGGCTGAAGAACGGCAGGGAGTTCCGCGGCGAGCACCGCATTGGAGGCATCAAGCTGCGGCATCAGCAGTGGAGCCTG
GTCATGGAAAGCGTGGTGCCCTCGGACCGCGGCAACTACACCTGCGTCGTGGAGAACAAGTTTGGCAGCATCCGGCAGACGTACACGCTGGACGTGCTGG
AGCGCTCCCCGCACCGGCCCATCCTGCAGGCGGGGCTGCCGGCCAACCAGACGGCGGTGCTGGGCAGCGACGTGGAGTTCCACTGCAAGGTGTACAGTGA
CGCACAGCCCCACATCCAGTGGCTCAAGCACGTGGAGGTGAATGGCAGCAAGGTGGGCCCGGACGGCACACCCTACGTTACCGTGCTCAAGACGGCGGGC
GCTAACACCACCGACAAGGAGCTAGAGGTTCTCTCCTTGCACAACGTCACCTTTGAGGACGCCGGGGAGTACACCTGCCTGGCGGGCAATTCTATTGGGT
TTTCTCATCACTCTGCGTGGCTGGTGGTGCTGCCAGCCGAGGAGGAGCTGGTGGAGGCTGACGAGGCGGGCAGTGTGTATGCAGGCATCCTCAGCTACGG
GGTGGGCTTCTTCCTGTTCATCCTGGTGGTGGCGGCTGTGACGCTCTGCCGCCTGCGCAGCCCCCCCAAGAAAGGCCTGGGCTCCCCCACCGTGCACAAG
ATCTCCCGCTTCCCGCTCAAGCGACAGCAG
GTGTCCCTGGAGTCCAACGCGTCCATGAGCTCCAACACACCACTGGTGCGCATCGCAAGGCTGTCCTCAG
GGGAGGGCCCCACGCTGGCCAATGTCTCCGAGCTCGAGCTGCCTGCCGACCCCAAATGGGAGCTGTCTCGGGCCCGGCTGACCCTGGGCAAGCCCCTTGG
GGAGGGCTGCTTCGGCCAGGTGGTCATGGCGGAGGCCATCGGCATTGACAAGGACCGGGCCGCCAAGCCTGTCACCGTAGCCGTGAAGATGCTGAAAGAC
GATGCCACTGACAAGGACCTGTCGGACCTGGTGTCTGAGATGGAGATGATGAAGATGATCGGGAAACACAAAAACATCATCAACCTGCTGGGCGCCTGCA
CGCAGGGCGGGCCCCTGTACGTGCTGGTGGAGTACGCGGCCAAGGGTAACCTGCGGGAGTTTCTGCGGGCGCGGCGGCCCCCGGGCCTGGACTACTCCTT
CGACACCTGCAAGCCGCCCGAGGAGCAGCTCACCTTCAAGGACCTGGTGTCCTGTGCCTACCAGGTGGCCCGGGGCATGGAGTACTTGGCCTCCCAGAAG
TGCATCCACAGGGACCTGGCTGCCCGCAATGTGCTGGTGACCGAGGACAACGTGATGAAGATCGCAGACTTCGGGCTGGCCCGGGACGTGCACAACCTCG
ACTACTACAAGAAGACGACCAACCTGGTCCTTTGGGGTCCTGCTCTGGGAGATCTTCACGCTGGGGGGCTCCCCGTACCCCGGCATCCCTGTGGAGGAGC
TCTTCAAGCTGCTGAAGGAGGGCCACCGCATGGACAAGCCCGCCAACTGCACACACGACCTGTACATGATCATGCGGGAGTGCTGGCATGCCGCGCCCTC
CCAGAGGCCCACCTTCAAGCAGCTGGTGGAGGACCTGGACCGTGTCCTTACCGTGACGTCCACCGACGAGTACCTGGACCTGTCGGCGCCTTTCGAGCAG
TACTCCCCGGGTGGCCAGGACACCCCCAGCTCCAGCTCCTCAGGGGACGACTCCGTGTTTGCCCACGACCTGCTGCCCCCGGCCCCACCCAGCAGTGGGG
GCTCGCGGACGTGAAGGGCCACTGGTCCCCAACAATGTGAGGGGTCCCTAGCAGCCCACCCTGCTGCTGGTGCACAGCCACTCCCCGGCATGAGACTCAG
TGCAGATGGAGAGACAGCTACACAGAGCTTTGGTCTGTGTGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGCACATCCGCGTGTGCCTGTGTGCGTGCGC
ATCTTGCCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGTGCAACGGTCTCCTGACTGGTGCTGCAGCACCGAGGGGCCTTTGTTCTGGGGGGA
CCCAGTGCAGAATGTAAGTGGGCCCACCCGGTGGGACCCCCGTGGGGCAGGGAGCTGGGCCCGACATGGCTCCGGCCTCTGCCTTTGCACCACGGGACAT
CACAGGGTGGGCCTCGGCCCCTCCCACACCCAAAGCTGAGCCTGCAGGGAAGCCCCACATGTCCAGCACCTTGTGCCTGGGGTGTTAGTGGCACCGCCTC
CCCACCTCCAGGCTTTCCCACTTCCCACCCTGCCCCTCAGAGACTGAAATTACGGGTACCTGAAGATGGGAGCCTTTACCTTTTATGCAAAAGGTTTATT
CCGGAAACTAGTGTACATTTCTATAAATAGATGCTGTGTATATGGTATATATACATATATATATATAACATATATGGAAGAGGAAAAGGCTGGTACAACG
GAGGCCTGCGACCCTGGGGGCACAGGAGGCAGGCATGGCCCTGGGCGGGGCGTGGGGGGGCGTGGAGGGAGGCCCCAGGGGGTCTCACCCATGCAAGCAG
AGGACCAGGGCCTTTTCTGGCACCGCAGTTTTGTTTTAAAACTGGACCTGTATATTTGTAAAGCTATTTATGGGCCCCTGGCACTCTTGTTCCCACACCC
CAACACTTCCAGCATTTAGCTGGCCACATGGCGGAGAGTTTTAATTTTTAACTTATTGACAACCGAGAAGGTTTATCCCGCCGATAGAGGGACGGCCAAG
AATGTACGTCCAGCCTGCCCCGGAGCTGGAGGATCCCCTCCAAGCCTAAAAGGTTGTTAATAGTTGGAGGTGATTCCAGTGAAGATATTTTATTTCCTTT
GTCCTTTTTCAGGAGAATTAGATTTCTATAGGATTTTTCTTTAGGAGATTTATTTTTTGGACTTCAAAGCAAGCTGGTATTTTCATACAAATTCTTCTAA
TTGCTGTGTGTCCCAGGCAGGGAGACGGTTTCCAGGGAGGGGCCGGCCCTGTGTGCAGGTTCCGATGTTATTAGATGTTACAAGTTTATATATATCTATA
TATATAATTTATTGAGTTTTTACAAGATGTATTTGTTGTAGACTTAACACTTCTTACGCAATGCTTCTAGAGTTTTATAGCCTGGACTGCTACCTTTCAA
AGCTTGGAGGGAAGCCGTGAATTCAGTTGGTTCGTTCTGTACTGTTACTGGGCCCTGAGTCTGGGCAGCTGTCCCTTGCTTGCCTGCAGGGCCATGGCTC
AGGGTGGTCTCTTCTTGGGGCCCAGTGCATGGTGGCCAGAGGTGTCACCCAAACCGGCAGGTGCGATTTTGTTAACCCAGCGACGAACTTTCCGAAAAAT
AAAGACACCTGGTTGCTAACCTGG
  • FGFR3.F3 (forward primer)
  • FGFR3.R3 (reverse primer)
  • Exon skipping and alternative donor or acceptor

Frame 0

AASRAAGAARSCSAGRTDAPAGRRPEGRGGSWA
RGQRAGAGAARSEPGSGARQSPERRPPPAGARAG
PWGAACPRALPEDAAAPAPAMGAPACALALCVA
VAIVAGASSESLGTEQRVVGRAAEVPGPEPGQQ
EQLVFGSGDAVELSCPPPGGGPMGPTVWVKDGTG
LVPSERVLVGPQRLQVLNASHEDSGAYSCRQRL
TQRVLCHFSVRVTDAPSSGDDEDGEDEAEDTGV
DTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAG
NPTPSISWLKNGREFRGEHRIGGIKLRHQQWSL
VMESVVPSDRGNYTCVVENKFGSIRQTYTLDVL
ERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSD
AQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAG
ANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIG
FSHHSAWLVVLPAEEELVEADEAGSVYAGILSYG
VGFFLFILVVAAVTLCRLRSPPKKGLGSPTVHK
ISRFPLKRQQ
VSLESNASMSSNTPLVRIARLSS
GEGPTLANVSELELPADPKWELSRARLTLGKPLG
EGCFGQVVMAEAIGIDKDRAAKPVTVAVKMLKD
DATDKDLSDLVSEMEMMKMIGKHKNIINLLGAC
TQGGPLYVLVEYAAKGNLREFLRARRPPGLDYSF
DTCKPPEEQLTFKDLVSCAYQVARGMEYLASQK
CIHRDLAARNVLVTEDNVMKIADFGLARDVHNL
DYYKKTTNLVLWGPALGDLHAGGLPVPRHPCGGA
LQAAEGGPPHGQARQLHTRPVHDHAGVLACRAL
PEAHLQAAGGGPGPCPYRDVHRRVPGPVGAFRA
VLPGWPGHPQLQLLRGRLRVCPRPAAPGPTQQWG
LADVKGHWSPTM*GVPSSPPCCWCTATPRHETQ
CRWRDSYTELWSVCVCVRVCVCVCTSACACVRA
HLASRCRGTLGVPAAVQRSPDWCCSTEGPLFWGD
PVQNVSGPTRWDPRGAGSWARHGSGLCLCTTGH
HRVGLGPSHTQS*ACREAPHVQHLVPGVLVAPP
PHLQAFPLPTLPLRD*NYGYLKMGAFTFYAKGLF
RKLVYISINRCCVYGIYTYIYITYMEEEKAGTT
EACDPGGTGGRHGPGRGVGGRGGRPQGVSPMQA
EDQGLFWHRSFVLKLDLYICKAIYGPLALLFPHP
NTSSI*LATWRRVLIFNLLTTEKVYPADRGTAK
NVRPACPGAGGSPPSLKGC**LEVIPVKIFYFL
CPFSGELDFYRIFL*EIYFLDFKASWYFHTNSSN
CCVSQAGRRFPGRGRPCVQVPMLLDVTSLYISI
YIIY*VFTRCICCRLNTSYAMLLEFYSLDCYLS
KLGGKP*IQLVRSVLLLGPESGQLSLACLQGHGS
GWSLLGAQCMVARGVTQTGRCDFVNPATNFPKN
KDTWLLTW

Frame 1

RRRGQLAPRGPALPVARTHRRAAGRRDGAGAGP
ADSEPEREPRVASRAPALASLPSGARLPPVPAP
GRGGQHARARCLRTPRPPPPPWAPLPAPSRSAWP
WPSWPAPPRSPWGRSSASWGERQKSRAQSPASR
SSWSSAAGMLWS*AVPRPGVVPWGPLSGSRMAQ
GWCPRSVSWWGPSGCRC*MPPTRTPGPTAAGSGS
RSAYCATSVCG*QTLHPREMTKTGRTRLRTQVW
TQGPLTGHGPSGWTRSCWPCRPPTPSASAAQPL
ATPLPPSPG*RTAGSSAASTALEASSCGISSGAW
SWKAWCPRTAATTPASWRTSLAASGRRTRWTCW
SAPRTGPSCRRGCRPTRRRCWAATWSSTARCTV
THSPTSSGSSTWR*MAARWARTAHPTLPCSRRRA
LTPPTRS*RFSPCTTSPLRTPGSTPAWRAILLG
FLITLRGWWCCQPRRSWWRLTRRAVCMQASSAT
GWASSCSSWWWRL*RSAACAAPPRKAWAPPPCTR
SPASRSSDSR
CPWSPTRP*APTHHWCASQGCPQ
GRAPRWPMSPSSSCLPTPNGSCLGPG*PWASPL
GRAASARWSWRRPSALTRTGPPSLSP*P*RC*KT
MPLTRTCRTWCLRWR**R*SGNTKTSSTCWAPA
RRAGPCTCWWSTRPRVTCGSFCGRGGPRAWTTP
STPASRPRSSSPSRTWCPVPTRWPGAWSTWPPRS
ASTGTWLPAMCW*PRTT**RSQTSGWPGTCTTS
TTTRRRPTWSFGVLLWEIFTLGGSPYPGIPVEE
LFKLLKEGHRMDKPANCTHDLYMIMRECWHAAPS
QRPTFKQLVEDLDRVLTVTSTDEYLDLSAPFEQ
YSPGGQDTPSSSSSGDDSVFAHDLLPPAPPSSG
GSRT*RATGPQQCEGSLAAHPAAGAQPLPGMRLS
ADGETATQSFGLCVCVCVCVCVCAHPRVPVCVR
ILPPGAEVPWVSPLLCNGLLTGAAAPRGLCSGG
TQCRM*VGPPGGTPVGQGAGPDMAPASAFAPRDI
TGWASAPPTPKAEPAGKPHMSSTLCLGC*WHRL
PTSRLSHFPPCPSETEITGT*RWEPLPFMQKVY
SGN*CTFL*IDAVYMVYIHIYI*HIWKRKRLVQR
RPATLGAQEAGMALGGAWGGVEGGPRGSHPCKQ
RTRAFSGTAVLF*NWTCIFVKLFMGPWHSCSHT
PTLPAFSWPHGGEF*FLTY*QPRRFIPPIEGRPR
MYVQPAPELEDPLQA*KVVNSWR*FQ*RYFISF
VLFQEN*ISIGFFFRRFIFWTSKQAGIFIQILL
IAVCPRQGDGFQGGAGPVCRFRCY*MLQVYIYLY
I*FIEFLQDVFVVDLTLLTQCF*SFIAWTATFQ
SLEGSREFSWFVLYCYWALSLGSCPLLACRAMA
QGGLFLGPSAWWPEVSPKPAGAILLTQRRTFRKI
KTPGC*P

Frame 2

GVAGSWRRAVLLCRSHGRTGGPPAGGTGRELGP
RTASRSGSRA*RAGLRRSPVSRAAPASRRCPRR
AVGGSMPARAA*GRRGPRPRHGRPCLRPRALRG
RGHRGRRLLGVLGDGAARRGASGRSPGPRARPAG
AVGLRQRGCCGAELSPARGWSHGAHCLGQGWHR
AGALGACPGGAPAAAGAECLPRGLRGLQLPAAA
HAARTVPLQCAGDRRSILGR*RRRGGRG*GHRCG
HRGPLLDTARADGQEAAGRAGRQHRPLPLPSRW
QPHSLHLLAEERQGVPRRAPHWRHQAAASAVEP
GHGKRGALGPRQLHLRRGEQVWQHPADVHAGRAG
ALPAPAHPAGGAAGQPDGGAGQRRGVPLQGVQ*
RTAPHPVAQARGGEWQQGGPGRHTLRYRAQDGG
R*HHRQGARGSLLAQRHL*GRRGVHLPGGQFYWV
FSSLCVAGGAASRGGAGGG*RGGQCVCRHPQLR
GGLLPVHPGGGGCDALPPAQPPQERPGLPHRAQ
DLPLPAQATA
GVPGVQRVHELQHTTGAHRKAVLR
GGPHAGQCLRARAACRPQMGAVSGPADPGQAPW
GGLLRPGGHGGGHRH*QGPGRQACHRSREDAER
RCH*QGPVGPGV*DGDDEDDRETQKHHQPAGRLH
AGRAPVRAGGVRGQG*PAGVSAGAAAPGPGLLL
RHLQAARGAAHLQGPGVLCLPGGPGHGVLGLPE
VHPQGPGCPQCAGDRGQRDEDRRLRAGPGRAQPR
LLQEDDQPGPLGSCSGRSSRWGAPRTPASLWRS
SSSC*RRATAWTSPPTAHTTCT*SCGSAGMPRP
PRGPPSSSWWRTWTVSLP*RPPTSTWTCRRLSSS
TPRVARTPPAPAPQGTTPCLPTTCCPRPHPAVG
ARGREGPLVPNNVRGP*QPTLLLVHSHSPA*DS
VQMERQLHRALVCVCVCACVCVCVHIRVCLCACA
SCLQVQRYPGCPRCCATVS*LVLQHRGAFVLGG
PSAECKWAHPVGPPWGRELGPTWLRPLPLHHGT
SQGGPRPLPHPKLSLQGSPTCPAPCAWGVSGTAS
PPPGFPTSHPAPQRLKLRVPEDGSLYLLCKRFI
PETSVHFYK*MLCIWYIYIYIYNIYGRGKGWYN
GGLRPWGHRRQAWPWAGRGGAWREAPGGLTHASR
GPGPFLAPQFCFKTGPVYL*SYLWAPGTLVPTP
QHFQHLAGHMAESFNF*LIDNREGLSRR*RDGQ
ECTSSLPRSWRIPSKPKRLLIVGGDSSEDILFPL
SFFRRIRFL*DFSLGDLFFGLQSKLVFSYKFF*
LLCVPGRETVSREGPALCAGSDVIRCYKFIYIY
IYNLLSFYKMYLL*T*HFLRNASRVL*PGLLPFK
AWREAVNSVGSFCTVTGP*VWAAVPCLPAGPWL
RVVSSWGPVHGGQRCHPNRQVRFC*PSDELSEK
*RHLVANL

Copyright ©2008,2017, all rights reserved.