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Sequences

Sequence APC.dAug05

GGCGGAAAAGCGGGCTGTCTCGGAAACTCAGAGCCGGGTTCCTCCCGGGTTTCTGCCGGGTTTCTCCCTGCGGCTCCTGGGTTGTTGAGACTCTTGTGAA
GATGGCTTGCGCTGCCGCGCGGTCCCCGGCCGACCAGGACAGGTTTATTTGTATCTATCCTGCTTATTTAAATAATAAGAAGACCATCGCAGAGGGAAGG
CGAATCCCCATAAGTAAGTGTTTATGTTTTTAACTGTTCAGGCTGTTGAAAATCCTACAGCTACAGAGATTCAAGATGTATGTTCAGCAGTTGGACTTAA
CGTATTTCTTGAGGTTAAGAATGTCTGAGGGGTCAGGCGGTGCTGGCAAGATGGCTGCACTTGAGAAGATGACGTTTCCCAAGAAGATGACATTTCCAGA
GAAACCAAGCCACAAAAAGTACAGGGCCGCCCTGAAGAAGGAGAAACGAAAGAAACGTCGGCAGGAACTTGCTCGACTGAGAGACTCAGGACTCTCACAG
GAGGAGGAAGAGGACACTTTTATTGAAGAACAACAACTAGAAGAAGAGAAGCTATTGGAAAGAGAGAGGGAAAGATTACATGAGGAGTGGTTGCTGAGGG
AGCAGAAGGCACAAGAAGAATTCAGAATAAAGAAGGAAAAGGAAGAGGCGGCTAAAAAATGGCTAGAAGAACAAGAGAGAAAGTTAAAGGAACAATGGAA
AGAACAGCAGAGGAAAGAGAGAGAAGAGGAGGAGCAGAAACAACAGGAGAAGAAAGAAAAAGAGGAAGCTGTGCAGAAGATGCTGGATCAGGCTGAAAAT
GATTTAGAAAATAGTACCACATGGCAAAACCCAGAACCACCCGTGGATTTCAGAGTAATGGAGAAGGATCGAGCTAATTGTCCCTTCTACAGTAAAACAG
GAGCTTGCAGATTTGGAGACAGATGTTCACGTAAACATAATTTCCCAACATCTAGTCCTACCCTTCTTATTAAGAGCATGTTTACAACGTTTGGAATGGA
GCAGTGCAGGAGGGATGACTATGACCCTGACGCAAGCCTGGAGTACAGCGAGGAAGAAACCTACCAACAGTTCCTAGATTTCTATGAGGATGTGTTGCCC
GAGTTCAAGAACGTGGGGAAAGTGATTCAGTTCAAGGTCAGCTGCAATTTGGAACCTCACCTGAGGGGCAATGTATATGTTCAGTACCAGTCGGAAGAAG
AATGCCAAGCAGCCCTTTCTCTGTTTAACGGACGATGGTATGCAGGACGACAGCTGCAATGTGAATTCTGCCCAGTGACCCGGTGGAAAATGGCGATTTG
TGGTTTATTTGAAATACAACAATGTCCAAGAGGAAAACACTGCAACTTTCTTCATGTGTTCAGAAATCCCAACAATGAATTCTGGGAAGCTAATAGAGAC
ATCTACTTGTCTTCAGATCAGACTGGCTCCTCCTTTGGCAAGAACTCCGAGAGGAGGGAGAAGATGGGCCACCACGACCACTACTACAGCAGGCAGCGGG
GAAGGAGAAACCCTAGTCCAGACCACACCTACAAAAGAAATGGGGAATCCGAGAGAAAAAAGAGTAGTCATAGGGGGAAGAAATCTCACAAACGCACATC
AAAGAGTCGGGAGAGGCACAATTCACCAAGCAGAGGAAGAAATAGGCACCGCAGCTGGGACCAGGGCCGCCGGAGCCAGAGCCGCAGGAGCCACCGCAGC
CGGAGCCAAAGTTCCTCTAGGTGCCGAAGTCGTGGGAGGAGGAAGTCGGGTAATAGAGACAGAACTGTTCAGAGTCCCCAATCCAAATAAACTAGTTTTG
TTCTT
  • APC.F16 (forward primer)
  • APC.R14 (reverse primer)
  • Single exon skipping

Frame 0

GGKAGCLGNSEPGSSRVSAGFLPAAPGLLRLL*
RWLALPRGPRPTRTGLFVSILLI*IIRRPSQREG
ESP*VSVYVFNCSGC*KSYSYRDSRCMFSSWT*
RIS*G*ECLRGQAVLARWLHLRR*RFPRR*HFQ
RNQATKSTGPP*RRRNERNVGRNLLD*ETQDSHR
RRKRTLLLKNNN*KKRSYWKERGKDYMRSGC*G
SRRHKKNSE*RRKRKRRLKNG*KNKRES*RNNG
KNSRGKREKRRSRNNRRRKKKRKLCRRCWIRLKM
I*KIVPHGKTQNHPWISE*WRRIELIVPSTVKQ
ELADLETDVHVNIISQHLVLPFLLRACLQRLEW
SSAGGMTMTLTQAWSTARKKPTNSS*ISMRMCCP
SSRTWGK*FSSRSAAIWNLT*GAMYMFSTSRKK
NAKQPFLCLTDDGMQDDSCNVNSAQ*PGGKWRF
VVYLKYNNVQEENTATFFMCSEIPTMNSGKLIET
STCLQIRLAPPLARTPRGGRRWATTTTTTAGSG
EGETLVQTTPTKEMGNPREKRVVIGGRNLTNAH
QRVGRGTIHQAEEEIGTAAGTRAAGARAAGATAA
GAKVPLGAEVVGGGSRVIETELFRVPNPNKLVL
F

Frame 1

AEKRAVSETQSRVPPGFLPGFSLRLLGC*DSCE
DGLRCRAVPGRPGQVYLYLSCLFK**EDHRRGK
ANPHK*VFMFLTVQAVENPTATEIQDVCSAVGLN
VFLEVKNV*GVRRCWQDGCT*EDDVSQEDDISR
ETKPQKVQGRPEEGETKETSAGTCSTERLRTLT
GGGRGHFY*RTTTRRREAIGKREGKIT*GVVAEG
AEGTRRIQNKEGKGRGG*KMARRTREKVKGTME
RTAEERERRGGAETTGEERKRGSCAEDAGSG*K
*FRK*YHMAKPRTTRGFQSNGEGSS*LSLLQ*NR
SLQIWRQMFT*T*FPNI*SYPSY*EHVYNVWNG
AVQEG*L*P*RKPGVQRGRNLPTVPRFL*GCVA
RVQERGESDSVQGQLQFGTSPEGQCICSVPVGRR
MPSSPFSV*RTMVCRTTAAM*ILPSDPVENGDL
WFI*NTTMSKRKTLQLSSCVQKSQQ*ILGS**R
HLLVFRSDWLLLWQELREEGEDGPPRPLLQQAAG
KEKP*SRPHLQKKWGIREKKE*S*GEEISQTHI
KESGEAQFTKQRKK*APQLGPGPPEPEPQEPPQ
PEPKFL*VPKSWEEEVG**RQNCSESPIQIN*FC
S

Frame 2

RKSGLSRKLRAGFLPGFCRVSPCGSWVVETLVK
MACAAARSPADQDRFICIYPAYLNNKKTIAEGR
RIPISKCLCF*LFRLLKILQLQRFKMYVQQLDL
TYFLRLRMSEGSGGAGKMAALEKMTFPKKMTFPE
KPSHKKYRAALKKEKRKKRRQELARLRDSGLSQ
EEEEDTFIEEQQLEEEKLLERERERLHEEWLLR
EQKAQEEFRIKKEKEEAAKKWLEEQERKLKEQWK
EQQRKEREEEEQKQQEKKEKEEAVQKMLDQAEN
DLENSTTWQNPEPPVDFRVMEKDRANCPFYSKT
GACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGME
QCRRDDYDPDASLEYSEEETYQQFLDFYEDVLP
EFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEE
ECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAIC
GLFEIQQCPRGKHCNFLHVFRNPNNEFWEANRD
IYLSSDQTGSSFGKNSERREKMGHHDHYYSRQR
GRRNPSPDHTYKRNGESERKKSSHRGKKSHKRTS
KSRERHNSPSRGRNRHRSWDQGRRSQSRRSHRS
RSQSSSRCRSRGRRKSGNRDRTVQSPQSK*TSF
VL

Sequence APC.qAug05

GCCACGCAGAAAAAGGAGGGGTTGAAAAGGGAGTACCCATCTGATATCTAGGCAGCATGAATTGGCCTTTGGTTCCCTGCCACCCGACCCTTTTCTCCTG
CCTCTTACTGCTCTAGTGATACCACTTATGCTATTGTCTATGGCAGGTTTATTTGTATCTATCCTGCTTATTTAAATAATAAGAAGACCATCGCAGAGGG
AAGGCGAATCCCCATAAGTAAGGCTGTTGAAAATCCTACAGCTACAGAGATTCAAGATGTATGTTCAGCAGTTGGACTTAACGTATTTCTTGAGAAAAAT
AAAATGTACTCTAGAGAATGGAATCGTGATGTCCAATACAGAGGCAGAGTCCGGGTCCAGCTCAAACAGGAAGATGGGAGCCTCTGCCTTGTACAGTTCC
CATCAC
GTTAAGAATGTCTGAGGGGTCAGGCGGTGCTGGCAAGATGGCTGCACTTGAGAAGATGACGTTTCCCAAGAAGATGACATTTCCAGAGAAACCA
AGCCACAAAAAGTACAGGGCCGCCCTGAAGAAGGAGAAACGAAAGAAACGTCGGCAGGAACTTGCTCGACTGAGAGACTCAGGACTCTCACAGGAGGAGG
AAGAGGACACTTTTATTGAAGAACAACAACTAGAAGAAGAGAAGCTATTGGAAAGAGAGAGGGAAAGATTACATGAGGAGTGGTTGCTGAGGGAGCAGAA
GGCACAAGAAGAATTCAGAATAAAGAAGGAAAAGGAAGAGGCGGCTAAAAAATGGCTAGAAGAACAAGAGAGAAAGTTAAAGGAACAATGGAAAGAACAG
CAGAGGAAAGAGAGAGAAGAGGAGGAGCAGAAACAACAGGAGAAGAAAGAAAAAGAGGAAGCTGTGCAGAAGATGCTGGATCAGGCTGAAAATGATTTAG
AAAATAGTACCACATGGCAAAACCCAGAACCACCCGTGGATTTCAGAGTAATGGAGAAGGATCGAGCTAATTGTCCCTTCTACAGTAAAACAGGAGCTTG
CAGATTTGGAGACAGATGTTCACGTAAACATAATTTCCCAACATCTAGTCCTACCCTTCTTATTAAGAGCATGTTTACAACGTTTGGAATGGAGCAGTGC
AGGAGGGATGACTATGACCCTGACGCAAGCCTGGAGTACAGCGAGGAAGAAACCTACCAACAGTTCCTAGATTTCTATGAGGATGTGTTGCCCGAGTTCA
AGAACGTGGGGAAAGTGATTCAGTTCAAGGTCAGCTGCAATTTGGAACCTCACCTGAGGGGCAATGTATATGTTCAGTACCAGTCGGAAGAAGAATGCCA
AGCAGCCCTTTCTCTGTTTAACGGACGATGGTATGCAGGACGACAGCTGCAATGTGAATTCTGCCCAGTGACCCGGTGGAAAATGGCGATTTGTGGTTTA
TTTGAAATACAACAATGTCCAAGAGGAAAACACTGCAACTTTCTTCATGTGTTCAGAAATCCCAACAATGAATTCTGGGAAGCTAATAGAGACATCTACT
TGTCTTCAGATCAGACTGGCTCCTCCTTTGGCAAGAACTCCGAGAGGAGGGAGAAGATGGGCCACCACGACCACTACTACAGCAGGCAGCGGGGAAGGAG
AAACCCTAGTCCAGACCACACCTACAAAAGAAATGGGGAATCCGAGAGAAAAAAGAGTAGTCATAGGGGGAAGAAATCTCACAAACGCACATCAAAGAGT
CGGGAGAGGCACAATTCACCAAGCAGAGGAAGAAATAGGCACCGCAGCTGGGACCAGGGCCGCCGGAGCCAGAGCCGCAGGAGCCACCGCAGCCGGAGCC
AAAGTTCCTCTAGGTGCCGAAGTCGTGGGAGGAGGAAGTCGGGTAATAGAGACAGAACTGTTCAGAGTCCCCAATCCAAATAAACTAGTTTTGTTCTT
  • APC.F16 (forward primer)
  • APC.R14 (reverse primer)
  • Single exon skipping

Frame 0

ATQKKEGLKREYPSDI*AA*IGLWFPATRPFSP
ASYCSSDTTYAIVYGRFICIYPAYLNNKKTIAEG
RRIPISKAVENPTATEIQDVCSAVGLNVFLEKN
KMYSREWNRDVQYRGRVRVQLKQEDGSLCLVQF
PS
R*ECLRGQAVLARWLHLRR*RFPRR*HFQRNQ
ATKSTGPP*RRRNERNVGRNLLD*ETQDSHRRR
KRTLLLKNNN*KKRSYWKERGKDYMRSGC*GSR
RHKKNSE*RRKRKRRLKNG*KNKRES*RNNGKNS
RGKREKRRSRNNRRRKKKRKLCRRCWIRLKMI*
KIVPHGKTQNHPWISE*WRRIELIVPSTVKQEL
ADLETDVHVNIISQHLVLPFLLRACLQRLEWSSA
GGMTMTLTQAWSTARKKPTNSS*ISMRMCCPSS
RTWGK*FSSRSAAIWNLT*GAMYMFSTSRKKNA
KQPFLCLTDDGMQDDSCNVNSAQ*PGGKWRFVVY
LKYNNVQEENTATFFMCSEIPTMNSGKLIETST
CLQIRLAPPLARTPRGGRRWATTTTTTAGSGEG
ETLVQTTPTKEMGNPREKRVVIGGRNLTNAHQRV
GRGTIHQAEEEIGTAAGTRAAGARAAGATAAGA
KVPLGAEVVGGGSRVIETELFRVPNPNKLVLF

Frame 1

PRRKRRG*KGSTHLISRQHELAFGSLPPDPFLL
PLTALVIPLMLLSMAGLFVSILLI*IIRRPSQR
EGESP*VRLLKILQLQRFKMYVQQLDLTYFLRKI
KCTLENGIVMSNTEAESGSSSNRKMGASALYSS
HH
VKNV*GVRRCWQDGCT*EDDVSQEDDISRET
KPQKVQGRPEEGETKETSAGTCSTERLRTLTGGG
RGHFY*RTTTRRREAIGKREGKIT*GVVAEGAE
GTRRIQNKEGKGRGG*KMARRTREKVKGTMERT
AEERERRGGAETTGEERKRGSCAEDAGSG*K*FR
K*YHMAKPRTTRGFQSNGEGSS*LSLLQ*NRSL
QIWRQMFT*T*FPNI*SYPSY*EHVYNVWNGAV
QEG*L*P*RKPGVQRGRNLPTVPRFL*GCVARVQ
ERGESDSVQGQLQFGTSPEGQCICSVPVGRRMP
SSPFSV*RTMVCRTTAAM*ILPSDPVENGDLWF
I*NTTMSKRKTLQLSSCVQKSQQ*ILGS**RHLL
VFRSDWLLLWQELREEGEDGPPRPLLQQAAGKE
KP*SRPHLQKKWGIREKKE*S*GEEISQTHIKE
SGEAQFTKQRKK*APQLGPGPPEPEPQEPPQPEP
KFL*VPKSWEEEVG**RQNCSESPIQIN*FCS

Frame 2

HAEKGGVEKGVPI*YLGSMNWPLVPCHPTLFSC
LLLL**YHLCYCLWQVYLYLSCLFK**EDHRRG
KANPHK*GC*KSYSYRDSRCMFSSWT*RIS*EK
*NVL*RMES*CPIQRQSPGPAQTGRWEPLPCTVP
IT
LRMSEGSGGAGKMAALEKMTFPKKMTFPEKP
SHKKYRAALKKEKRKKRRQELARLRDSGLSQEE
EEDTFIEEQQLEEEKLLERERERLHEEWLLREQK
AQEEFRIKKEKEEAAKKWLEEQERKLKEQWKEQ
QRKEREEEEQKQQEKKEKEEAVQKMLDQAENDL
ENSTTWQNPEPPVDFRVMEKDRANCPFYSKTGAC
RFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQC
RRDDYDPDASLEYSEEETYQQFLDFYEDVLPEF
KNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQ
AALSLFNGRWYAGRQLQCEFCPVTRWKMAICGL
FEIQQCPRGKHCNFLHVFRNPNNEFWEANRDIY
LSSDQTGSSFGKNSERREKMGHHDHYYSRQRGRR
NPSPDHTYKRNGESERKKSSHRGKKSHKRTSKS
RERHNSPSRGRNRHRSWDQGRRSQSRRSHRSRS
QSSSRCRSRGRRKSGNRDRTVQSPQSK*TSFVL

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