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Sequences

Sequence TSSC4.fAug05

GGCGTGGAGGAGTAGAGGGGCGAGCGCATGCGCACAGGACTACACGTCCCGACAGGCGTCGGGAGCGGCGGCCCAGTTCCTTGTGGGAGCTGTAGTTCTG
CAGGCGCGGAAGCCGTGGTGCTCGGCCGGCAGAGCACTCGGTTTCCCAGAGGGCTGAGCGCGCCGCACGGAGGTGCGGCGCCGACCAAGATGGAGACTGC
CGAGCAGCCTTGAGCCGGTAGGTTTGTGGTGAGGGAGGACGGGCCGCGCGGGCCGGCCGAGCCTCCGGGAGGTCACCGAGCGCAGCTTTAATACCTGAGC
TCGAAGGCCCCGCTGTGCTCGCCGACCCCCGTACCTCGCGGCCGGGCCCTTGGGACCCACAGCATCCTTGTGAGGCCCGGAGGCCTGTCCAGCCCGACTG
GACAGTGCCGAGGGGCACCGAGAGCCAGCTTGGCACCGAGAGTTCGTTTGTTCTCTGGCGGGGAGGTCTTGCTGGCACATATAGTGGAGAAAGGCCGGGC
TCTGCGTTCATGTGGAGAAAGAGACGGCTTCCTTCAGCCTACGGACATGAAGGAGTCAACTCTACCTTCCACTCGTTGCCGGCTTTCGCCGAGAACCCCG
AGAAACGGACTACCGGAGTCCCTATCTTGCAGCCCGATCCCCGCTACCCGTCGGAGTGCCCCGCTGACCAGGCTGCTTCTGGCCGCGGCGGCGTTCCGCT
GCAGAGGACGGGAGTGCGAATCTGGGAAGCAGGGTTCTGGTTGAACTCCAGCTTCGTCTGCAACATACTGTGTGACTTGGGCAAATTATTTCCCCCGCCC
CGTTCCTGCCAGCTTTAAAACGGTCATCAGTGGGGGGTGCTGCGTATCCCCTTTCACTGGGGTGGCTTCTTCACTGAGGAGAGTCGCGCCTCAGAGGAAC
TGAGGTCCTGCCTGTGTTCGACCTGGTGGGGGGCACTAAGAGCCCCTGATAGTACCCCTGACCCCATCCTTATTGGGTGCACAAGACACAGGTCACTCTG
GGCGGGCAAGGAGTTTTGGTAGCAGGAGAGGAGTCGGTGGATGGATGGCTGAGGACAGTGCAGAAGGGTGTGGCTGGGCCGTCTTTTTTTGCCTGGAAAT
TCAAGTTCTGAGGCACCCAGTCACTCCAGCACTAAATGGGTGCAGGAGGCAGCACTTGTCTGCCCAGCTGGAAAGGCAGGGTATGTGCTGAGTGTTACAG
GTGGAAGGCCACTGGAGGTCGCTCCAGGAGCCGCGGGGATTTACCTCTGCCTAACAGGGCTGCTCAAGGTGATGGTCGACACCCCACTTTCCTGAGAGCT
TGACCCTCAGATGCCAGGGCCTTGGCTGCAGATTCCTTGGGAGCTCCCGGGGATCTTCCAGCAAATAGGAGCAAATCTTTTCCCCGTGGATCAGGAAGGT
GCACGCTCTTTGTGGAATACGACTGCTCACCCCGCACAGCAAGCAGCTTATAAGTGGCCCTCCTGCCTGATTTCAGCCCTGGGTTCAAGCCCTGGGTGGC
TGCTTACTACCAAAATCGCTCAGTAGCTCCAAGCCTGCCTGCAGAGGGTTGGCACCATTAAATGAGTTGAGCAGCTGAACAGAGGCCATGCCGGGGCACT
CCGAGGCCTGAGACGACCACGCCTGTGCCGCTGAGGACCTTCATCAGGGCTCCGTCCACTTGGCCCGCTTGGCTGTCCAATCACACTCCAGTGTCAACCA
CTGGCACCCAGCAGCCAAGAGAGGTGTGGCGTGGCCCTGGGGACGCATGGCTGAGGCAGGAACAGGCCTCCTCCCAGCCACGGTGCAGCCATTCCATCTG
AGAGGCAT
GAGCTCCACCTTCTCCCAGCGCAGCCGTGACATCTTTGACTGCCTGGAGGGGGCGGCCAGACGGGCTCCATCCTCTGTGGCCCACACCAGCA
TGAGTGACAACGGAGGCTTCAAGCGGCCCCTAGCGCCCTCAGGCCGGTCTCCAGTGGAAGGCCTGGGCAGGGCCCATCGGAGCCCTGCCTCACCAAGGGT
GCCTCCGGTCCCCGACTACGTGGCACACCCCGAGCGCTGGACCAAGTACAGCCTGGAAGATGTGACCGAGGTCAGCGAGCAGAGCAATCAGGCCACCGCC
CTGGCCTTCCTGGGCTCCCAGAGCCTGGCTGCCCCCACTGACTGCGTGTCCTCCTTCAACCAGGATCCCTCCAGCTGTGGGGAGGGGAGGGTCATCTTCA
CCAAACCAGTCCGAGGGGTCGAAGCCAGACACGAGAGGAAGAGGGTCCTGGGGAAGGTGGGAGAGCCAGGCAGGGGCGGCCTTGGGAATCCTGCCACAGA
CAGGGGCGAGGGCCCTGTGGAGCTGGCCCATCTGGCCGGGCCCGGGAGCCCAGAGGCTGAGGAGTGGGGCAGCCACCATGGAGGCCTGCAGGAGGTGGAG
GCACTGTCAGGGTCTGTCCACAGTGGGTCTGTGCCAGGTCTCCCGCCGGTGGAAACTGTTGGCTTCCATGGCAGCAGGAAGCGGAGTCGAGACCACTTCC
GGAACAAGAGCAGCAGCCCCGAGGACCCAGGTGCTGAGGTCTGAGAGGGAGATGGCCCAGCCTGACCCCACTGGCCACTGCCATCCTGCTGCCTTCCCAG
TGGGGCTGGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCT
CCCAAGCAGAGACCTTGCTGAAGCTCCTGGGGTGTGGGGTGTGGGCTGGAAGCACTGGCTCCCTGGTAGGGACAATAAAGGTTTTGGGTCTTTCTGAGA
  • TSSC4.F10 (forward primer)
  • TSSC4.R7 (reverse primer)
  • Intron retention

Frame 0

GVEE*RGERMRTGLHVPTGVGSGGPVPCGSCSS
AGAEAVVLGRQSTRFPRGLSAPHGGAAPTKMETA
EQP*AGRFVVREDGPRGPAEPPGGHRAQL*YLS
SKAPLCSPTPVPRGRALGTHSILVRPGGLSSPT
GQCRGAPRASLAPRVRLFSGGEVLLAHIVEKGRA
LRSCGERDGFLQPTDMKESTLPSTRCRLSPRTP
RNGLPESLSCSPIPATRRSAPLTRLLLAAAAFR
CRGRECESGKQGSG*TPASSATYCVTWANYFPRP
VPASFKTVISGGCCVSPFTGVASSLRRVAPQRN
*GPACVRPGGGH*EPLIVPLTPSLLGAQDTGHS
GRARSFGSRRGVGGWMAEDSAEGCGWAVFFCLEI
QVLRHPVTPALNGCRRQHLSAQLERQGMC*VLQ
VEGHWRSLQEPRGFTSA*QGCSR*WSTPHFPES
LTLRCQGLGCRFLGSSRGSSSK*EQIFSPWIRKV
HALCGIRLLTPHSKQLISGPPA*FQPWVQALGG
CLLPKSLSSSKPACRGLAPLNELSS*TEAMPGH
SEA*DDHACAAEDLHQGSVHLARLAVQSHSSVNH
WHPAAKRGVAWPWGRMAEAGTGLLPATVQPFHL
RGM
SSTFSQRSRDIFDCLEGAARRAPSSVAHTS
MSDNGGFKRPLAPSGRSPVEGLGRAHRSPASPRV
PPVPDYVAHPERWTKYSLEDVTEVSEQSNQATA
LAFLGSQSLAAPTDCVSSFNQDPSSCGEGRVIF
TKPVRGVEARHERKRVLGKVGEPGRGGLGNPATD
RGEGPVELAHLAGPGSPEAEEWGSHHGGLQEVE
ALSGSVHSGSVPGLPPVETVGFHGSRKRSRDHF
RNKSSSPEDPGAEV*EGDGPA*PHWPLPSCCLPS
GAGQGAAWPLPSWNGRKPAGGTGGPGCSSGQHP
PKQRPC*SSWGVGCGLEALAPW*GQ*RFWVFLR

Frame 1

AWRSRGASACAQDYTSRQASGAAAQFLVGAVVL
QARKPWCSAGRALGFPEG*ARRTEVRRRPRWRL
PSSLEPVGLW*GRTGRAGRPSLREVTERSFNT*A
RRPRCARRPPYLAAGPLGPTASL*GPEACPARL
DSAEGHREPAWHREFVCSLAGRSCWHI*WRKAG
LCVHVEKETASFSLRT*RSQLYLPLVAGFRREPR
ETDYRSPYLAARSPLPVGVPR*PGCFWPRRRSA
AEDGSANLGSRVLVELQLRLQHTV*LGQIISPA
PFLPALKRSSVGGAAYPLSLGWLLH*GESRLRGT
EVLPVFDLVGGTKSP**YP*PHPYWVHKTQVTL
GGQGVLVAGEESVDGWLRTVQKGVAGPSFFAWK
FKF*GTQSLQH*MGAGGSTCLPSWKGRVCAECYR
WKATGGRSRSRGDLPLPNRAAQGDGRHPTFLRA
*PSDARALAADSLGAPGDLPANRSKSFPRGSGR
CTLFVEYDCSPRTASSL*VALLPDFSPGFKPWVA
AYYQNRSVAPSLPAEGWHH*MS*AAEQRPCRGT
PRPETTTPVPLRTFIRAPSTWPAWLSNHTPVST
TGTQQPREVWRGPGDAWLRQEQASSQPRCSHSI*
EA
*APPSPSAAVTSLTAWRGRPDGLHPLWPTPA
*VTTEASSGP*RPQAGLQWKAWAGPIGALPHQG
CLRSPTTWHTPSAGPSTAWKM*PRSASRAIRPPP
WPSWAPRAWLPPLTACPPSTRIPPAVGRGGSSS
PNQSEGSKPDTRGRGSWGRWESQAGAALGILPQ
TGARALWSWPIWPGPGAQRLRSGAATMEACRRWR
HCQGLSTVGLCQVSRRWKLLASMAAGSGVETTS
GTRAAAPRTQVLRSEREMAQPDPTGHCHPAAFP
VGLVRGQPGHCLAGMGGSLQVAPVALAAVLGSIL
PSRDLAEAPGVWGVGWKHWLPGRDNKGFGSF*

Frame 2

RGGVEGRAHAHRTTRPDRRRERRPSSLWEL*FC
RRGSRGARPAEHSVSQRAERAARRCGADQDGDC
RAALSR*VCGEGGRAARAGRASGRSPSAALIPE
LEGPAVLADPRTSRPGPWDPQHPCEARRPVQPDW
TVPRGTESQLGTESSFVLWRGGLAGTYSGERPG
SAFMWRKRRLPSAYGHEGVNSTFHSLPAFAENP
EKRTTGVPILQPDPRYPSECPADQAASGRGGVPL
QRTGVRIWEAGFWLNSSFVCNILCDLGKLFPPP
RSCQL*NGHQWGVLRIPFHWGGFFTEESRASEE
LRSCLCSTWWGALRAPDSTPDPILIGCTRHRSLW
AGKEFW*QERSRWMDG*GQCRRVWLGRLFLPGN
SSSEAPSHSSTKWVQEAALVCPAGKAGYVLSVT
GGRPLEVAPGAAGIYLCLTGLLKVMVDTPLS*EL
DPQMPGPWLQIPWELPGIFQQIGANLFPVDQEG
ARSLWNTTAHPAQQAAYKWPSCLISALGSSPGW
LLTTKIAQ*LQACLQRVGTIK*VEQLNRGHAGAL
RGLRRPRLCR*GPSSGLRPLGPLGCPITLQCQP
LAPSSQERCGVALGTHG*GRNRPPPSHGAAIPS
ERH
ELHLLPAQP*HL*LPGGGGQTGSILCGPHQH
E*QRRLQAAPSALRPVSSGRPGQGPSEPCLTKG
ASGPRLRGTPRALDQVQPGRCDRGQRAEQSGHR
PGLPGLPEPGCPH*LRVLLQPGSLQLWGGEGHLH
QTSPRGRSQTREEEGPGEGGRARQGRPWESCHR
QGRGPCGAGPSGRAREPRG*GVGQPPWRPAGGG
GTVRVCPQWVCARSPAGGNCWLPWQQEAESRPLP
EQEQQPRGPRC*GLRGRWPSLTPLATAILLPSQ
WGWSGGSLATA*LEWEEACRWHRWPWLQFWAAS
SQAETLLKLLGCGVWAGSTGSLVGTIKVLGLSE

Sequence TSSC4.dAug05

CCCTCCTCTTCCTGTTCTTGGTCAATTCCGGTCTTGTTTCCCCAACAAATGCCGTCGTTTCCGGGGCTGCTTCCGAGCCGGACCCAAGGGCCGGGGCGTG
GAGGAGTAGAGGGGCGAGCGCATGCGCACAGGACTACACGTCCCGACAGGCGTCGGGAGCGGCGGCCCAGTTCCTTGTGGGAGCTGTAGTTCTGCAGGCG
CGGAAGCCGTGGTGCTCGGCCGGCAGAGCACTCGGTTTCCCAGAGGGCTGAGCGCGCCGCACGGAGGTGCGGCGCCGACCAAGATGGAGACTGCCGAGCA
GCCTTGAGCCGGAAGGTGCACGCTCTTTGTGGAATACGACTGCTCACCCCGCACAGCAAGCAGCTTATAAGTGGCCCTCCTGCCTGATTTCAGCCCTGGG
TTCAAGCCCTGGGTGGCTGCTTACTACCAAAATCGCTCAGTAGCTCCAAGCCTGCCTGCAGAGGGTTGGCACCATTAAATGAGTTGAGCAGCTGAACAGA
GGCCATGCCGGGGCACTCCGAGGCCTGAGACGACCACGCCTGTGCCGCTGAGGACCTTCATCAGGGCTCCGTCCACTTGGCCCGCTTGGCTGTCCAATCA
CACTC
CAGTGTCAACCACTGGCACCCAGCAGCCAAGAGAGGTGTGGCGTGGCCCTGGGGACGCATGGCTGAGGCAGGAACAGGCCTCCTCCCAGCCACGG
TGCAGCCATTCCATCTGAGAGGCATGAGCTCCACCTTCTCCCAGCGCAGCCGTGACATCTTTGACTGCCTGGAGGGGGCGGCCAGACGGGCTCCATCCTC
TGTGGCCCACACCAGCATGAGTGACAACGGAGGCTTCAAGCGGCCCCTAGCGCCCTCAGGCCGGTCTCCAGTGGAAGGCCTGGGCAGGGCCCATCGGAGC
CCTGCCTCACCAAGGGTGCCTCCGGTCCCCGACTACGTGGCACACCCCGAGCGCTGGACCAAGTACAGCCTGGAAGATGTGACCGAGGTCTCCCGCCGGT
GGAAACTGTTGGCTTCCATGGCAGCAGGAAGCGGAGTCGAGACCACTTCCGGAACAAGAGCAGCAGCCCCGAGGACCCAGGTGCTGAGGTCTGAGAGGGA
GATGGCCCAGCCTGACCCCACTGGCCACTGCCATCCTGCTGCCTTCCCAGTGGGGCTGGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGA
AGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCTGGGGTGTGGGGTGTGGGCTGGA
AGCACTGGCTCCCTGGTAGGGACAATAAAGGTTTTGGGTCTTTCTGAGA
  • TSSC4.F10 (forward primer)
  • TSSC4.R7 (reverse primer)
  • Intron retention

Frame 0

PSSSCSWSIPVLFPQQMPSFPGLLPSRTQGPGR
GGVEGRAHAHRTTRPDRRRERRPSSLWEL*FCRR
GSRGARPAEHSVSQRAERAARRCGADQDGDCRA
ALSRKVHALCGIRLLTPHSKQLISGPPA*FQPW
VQALGGCLLPKSLSSSKPACRGLAPLNELSS*TE
AMPGHSEA*DDHACAAEDLHQGSVHLARLAVQS
HS
SVNHWHPAAKRGVAWPWGRMAEAGTGLLPAT
VQPFHLRGMSSTFSQRSRDIFDCLEGAARRAPSS
VAHTSMSDNGGFKRPLAPSGRSPVEGLGRAHRS
PASPRVPPVPDYVAHPERWTKYSLEDVTEVSRR
WKLLASMAAGSGVETTSGTRAAAPRTQVLRSERE
MAQPDPTGHCHPAAFPVGLVRGQPGHCLAGMGG
SLQVAPVALAAVLGSILPSRDLAEAPGVWGVGW
KHWLPGRDNKGFGSF*

Frame 1

PPLPVLGQFRSCFPNKCRRFRGCFRAGPKGRGV
EE*RGERMRTGLHVPTGVGSGGPVPCGSCSSAG
AEAVVLGRQSTRFPRGLSAPHGGAAPTKMETAEQ
P*AGRCTLFVEYDCSPRTASSL*VALLPDFSPG
FKPWVAAYYQNRSVAPSLPAEGWHH*MS*AAEQ
RPCRGTPRPETTTPVPLRTFIRAPSTWPAWLSNH
T
PVSTTGTQQPREVWRGPGDAWLRQEQASSQPR
CSHSI*EA*APPSPSAAVTSLTAWRGRPDGLHP
LWPTPA*VTTEASSGP*RPQAGLQWKAWAGPIGA
LPHQGCLRSPTTWHTPSAGPSTAWKM*PRSPAG
GNCWLPWQQEAESRPLPEQEQQPRGPRC*GLRG
RWPSLTPLATAILLPSQWGWSGGSLATA*LEWEE
ACRWHRWPWLQFWAASSQAETLLKLLGCGVWAG
STGSLVGTIKVLGLSE

Frame 2

LLFLFLVNSGLVSPTNAVVSGAASEPDPRAGAW
RSRGASACAQDYTSRQASGAAAQFLVGAVVLQA
RKPWCSAGRALGFPEG*ARRTEVRRRPRWRLPS
SLEPEGARSLWNTTAHPAQQAAYKWPSCLISALG
SSPGWLLTTKIAQ*LQACLQRVGTIK*VEQLNR
GHAGALRGLRRPRLCR*GPSSGLRPLGPLGCPI
TL
QCQPLAPSSQERCGVALGTHG*GRNRPPPSHG
AAIPSERHELHLLPAQP*HL*LPGGGGQTGSIL
CGPHQHE*QRRLQAAPSALRPVSSGRPGQGPSE
PCLTKGASGPRLRGTPRALDQVQPGRCDRGLPPV
ETVGFHGSRKRSRDHFRNKSSSPEDPGAEV*EG
DGPA*PHWPLPSCCLPSGAGQGAAWPLPSWNGR
KPAGGTGGPGCSSGQHPPKQRPC*SSWGVGCGLE
ALAPW*GQ*RFWVFLR

Sequence TSSC4.cAug05

CCCTCCTCTTCCTGTTCTTGGTCAATTCCGGTCTTGTTTCCCCAACAAATGCCGTCGTTTCCGGGGCTGCTTCCGAGCCGGACCCAAGGGCCGGGGCGTG
GAGGAGTAGAGGGGCGAGCGCATGCGCACAGGACTACACGTCCCGACAGGCGTCGGGAGCGGCGGCCCAGTTCCTTGTGGGAGCTGTAGTTCTGCAGGCG
CGGAAGCCGTGGTGCTCGGCCGGCAGAGCACTCGGTTTCCCAGAGGGCTGAGCGCGCCGCACGGAGGTGCGGCGCCGACCAAGATGGAGACTGCCGAGCA
GCCTTGAGCCGTTGAGCAGCTGAACAGAGGCCATGCCGGGGCACTCCGAGGCCTGAGACGACCACGCCTGTGCCGCTGAGGACCTTCATCAGGGCTCCGT
CCACTTGGCCCGCTTGGCTGTCCAATCACACTCCAGTGTCAACCACTGGCACCCAGCAGCCAAGAGAGGTGTGGCGTGGCCCTGGGGACGCATGGCTGAG
GCAGGAACAGGCCTCCTCCCAGCCACGGTGCAGCCATTCCATCTGAGAGGCATGAGCTCCACCTTCTCCCAGCGCAGCCGTGACATCTTTGACTGCCTGG
AGGGGGCGGCCAGACGGGCTCCATCCTCTGTGGCCCACACCAGCATGAGTGACAACGGAGGCTTCAAGCGGCCCCTAGCGCCCTCAGGCCGGTCTCCAGT
GGAAGGCCTGGGCAGGGCCCATCGGAGCCCTGCCTCACCAAGGGTGCCTCCGGTCCCCGACTACGTGGCACACCCCGAGCGCTGGACCAAGTACAGCCTG
GAAGATGTGACCGAGGTCAGCGAGCAGAGCAATCAGGCCACCGCCCTGGCCTTCCTGGGCTCCCAGAGCCTGGCTGCCCCCACTGACTGCGTGTCCTCCT
TCAACCAGGATCCCTCCAGCTGTGGGGAGGGGAGGGTCATCTTCACCAAACCAGTCCGAGGGGTCGAAGCCAGACACGAGAGGAAGAGGGTCCTGGGGAA
GGTGGGAGAGCCAGGCAGGGGCGGCCTTGGGAATCCTGCCACAGACAGGGGCGAGGGCCCTGTGGAGCTGGCCCATCTGGCCGGGCCCGGGAGCCCAGAG
GCTGAGGAGTGGGGCAGCCACCATGGAGGCCTGCAGGAGGTGGAGGCACTGTCAGGGTCTGTCCACAGTGGGTCTGTGCCAGGTCTCCCGCCGGTGGAAA
CTGTTGGCTTCCATGGCAGCAGGAAGCGGAGTCGAGACCACTTCCGGAACAAGAGCAGCAGCCCCGAGGACCCAGGTGCTGAGGTCTGAGAGGGAGATGG
CCCAGCCTGACCCCACTGGCCACTGCCATCCTGCTGCCTTCCCAGTGGGGCTGGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCT
GCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCTGGGGTGTGGGGTGTGGGCTGGAAGCAC
TGGCTCCCTGGTAGGGACAATAAAGGTTTTGGGTCTTTCTGAGA
  • TSSC4.F10 (forward primer)
  • TSSC4.R7 (reverse primer)
  • Intron retention

Frame 0

PSSSCSWSIPVLFPQQMPSFPGLLPSRTQGPGR
GGVEGRAHAHRTTRPDRRRERRPSSLWEL*FCRR
GSRGARPAEHSVSQRAERAARRCGADQDGDCRA
ALSR*AAEQRPCRGTPRPETTTPVPLRTFIRAP
STWPAWLSNHTPVSTTGTQQPREVWRGPGDAWLR
QEQASSQPRCSHSI*EA*APPSPSAAVTSLTAW
RGRPDGLHPLWPTPA*VTTEASSGP*RPQAGLQ
WKAWAGPIGALPHQGCLRSPTTWHTPSAGPSTAW
KM*PRSASRAIRPPPWPSWAPRAWLPPLTACPP
STRIPPAVGRGGSSSPNQSEGSKPDTRGRGSWG
RWESQAGAALGILPQTGARALWSWPIWPGPGAQR
LRSGAATMEACRRWRHCQGLSTVGLCQVSRRWK
LLASMAAGSGVETTSGTRAAAPRTQVLRSEREM
AQPDPTGHCHPAAFPVGLVRGQPGHCLAGMGGSL
QVAPVALAAVLGSILPSRDLAEAPGVWGVGWKH
WLPGRDNKGFGSF*

Frame 1

PPLPVLGQFRSCFPNKCRRFRGCFRAGPKGRGV
EE*RGERMRTGLHVPTGVGSGGPVPCGSCSSAG
AEAVVLGRQSTRFPRGLSAPHGGAAPTKMETAEQ
P*AVEQLNRGHAGALRGLRRPRLCR*GPSSGLR
PLGPLGCPITLQCQPLAPSSQERCGVALGTHG*
GRNRPPPSHGAAIPSERHELHLLPAQP*HL*LPG
GGGQTGSILCGPHQHE*QRRLQAAPSALRPVSS
GRPGQGPSEPCLTKGASGPRLRGTPRALDQVQP
GRCDRGQRAEQSGHRPGLPGLPEPGCPH*LRVLL
QPGSLQLWGGEGHLHQTSPRGRSQTREEEGPGE
GGRARQGRPWESCHRQGRGPCGAGPSGRAREPR
G*GVGQPPWRPAGGGGTVRVCPQWVCARSPAGGN
CWLPWQQEAESRPLPEQEQQPRGPRC*GLRGRW
PSLTPLATAILLPSQWGWSGGSLATA*LEWEEA
CRWHRWPWLQFWAASSQAETLLKLLGCGVWAGST
GSLVGTIKVLGLSE

Frame 2

LLFLFLVNSGLVSPTNAVVSGAASEPDPRAGAW
RSRGASACAQDYTSRQASGAAAQFLVGAVVLQA
RKPWCSAGRALGFPEG*ARRTEVRRRPRWRLPS
SLEPLSS*TEAMPGHSEA*DDHACAAEDLHQGSV
HLARLAVQSHSSVNHWHPAAKRGVAWPWGRMAE
AGTGLLPATVQPFHLRGMSSTFSQRSRDIFDCL
EGAARRAPSSVAHTSMSDNGGFKRPLAPSGRSPV
EGLGRAHRSPASPRVPPVPDYVAHPERWTKYSL
EDVTEVSEQSNQATALAFLGSQSLAAPTDCVSS
FNQDPSSCGEGRVIFTKPVRGVEARHERKRVLGK
VGEPGRGGLGNPATDRGEGPVELAHLAGPGSPE
AEEWGSHHGGLQEVEALSGSVHSGSVPGLPPVE
TVGFHGSRKRSRDHFRNKSSSPEDPGAEV*EGDG
PA*PHWPLPSCCLPSGAGQGAAWPLPSWNGRKP
AGGTGGPGCSSGQHPPKQRPC*SSWGVGCGLEA
LAPW*GQ*RFWVFLR

Sequence TSSC4.hAug05

GGCGTGGAGGAGTAGAGGGGCGAGCGCATGCGCACAGGACTACACGTCCCGACAGGCGTCGGGAGCGGCGGCCCAGTTCCTTGTGGGAGCTGTAGTTCTG
CAGGCGCGGAAGCCGTGGTGCTCGGCCGGCAGAGCACTCGGTTTCCCAGAGGGCTGAGCGCGCCGCACGGAGGTGCGGCGCCGACCAAGATGGAGACTGC
CGAGCAGCCTTGAGCCGGTAGGTTTGTGGTGAGGGAGGACGGGCCGCGCGGGCCGGCCGAGCCTCCGGGAGGTCACCGAGCGCAGCTTTAATACCTGAGC
TCGAAGGCCCCGCTGTGCTCGCCGACCCCCGTACCTCGCGGCCGGGCCCTTGGGACCCACAGCATCCTTGTGAGGCCCGGAGGCCTGTCCAGCCCGACTG
GACAGTGCCGAGGGGCACCGAGAGCCAGCTTGGCACCGAGAGTTCGTTTGTTCTCTGGCGGGGAGGTCTTGCTGGCACATATAGTGGAGAAAGGCCGGGC
TCTGCGTTCATGTGGAGAAAGAGACGGCTTCCTTCAGCCTACGGACATGAAGGAGTCAACTCTACCTTCCACTCGTTGCCGGCTTTCGCCGAGAACCCCG
AGAAACGGACTACCGGAGTCCCTATCTTGCAGCCCGATCCCCGCTACCCGTCGGAGTGCCCCGCTGACCAGGCTGCTTCTGGCCGCGGCGGCGTTCCGCT
GCAGAGGACGGGAGTGCGAATCTGGGAAGCAGGGTTCTGGTTGAACTCCAGCTTCGTCTGCAACATACTGTGTGACTTGGGCAAATTATTTCCCCCGCCC
CGTTCCTGCCAGCTTTAAAACGGTCATCAGTGGGGGGTGCTGCGTATCCCCTTTCACTGGGGTGGCTTCTTCACTGAGGAGAGTCGCGCCTCAGAGGAAC
TGAGTTGAGCAGCTGAACAGAGGCCATGCCGGGGCACTCCGAGGCCTGAGACGACCACGCCTGTGCCGCTGAGGACCTTCATCAGGGCTCCGTCCACTTG
GCCCGCTTGGCTGTCCAATCACACTCCAGTGTCAACCACTGGCACCCAGCAGCCAAGAGAGGTGTGGCGTGGCCCTGGGGACGCATGGCTGAGGCAGGAA
CAGGTGAGCCGTCCCCCAGCGTGGAGGGCGAACACGGGACGGAGTATGACACGCTGCCTTCCGACACAGTCTCCCTCAGTGACTCGGACTCTGACCTCAG
CTTGCCCGGTGGTGCTGAAGTGGAAGCACTGTCCCCGATGGGGCTGCCTGGGGAGGAGGATTCAGGTCCTGATGAGCCGCCCTCACCCCCGTCAG
GCCTC
CTCCCAGCCACGGTGCAGCCATTCCATCTGAGAGGCATGAGCTCCACCTTCTCCCAGCGCAGCCGTGACATCTTTGACTGCCTGGAGGGGGCGGCCAGAC
GGGCTCCATCCTCTGTGGCCCACACCAGCATGAGTGACAACGGAGGCTTCAAGCGGCCCCTAGCGCCCTCAGGCCGGTCTCCAGTGGAAGGCCTGGGCAG
GGCCCATCGGAGCCCTGCCTCACCAAGGGTGCCTCCGGTCCCCGACTACGTGGCACACCCCGAGCGCTGGACCAAGTACAGCCTGGAAGATGTGACCGAG
GTCAGCGAGCAGAGCAATCAGGCCACCGCCCTGGCCTTCCTGGGCTCCCAGAGCCTGGCTGCCCCCACTGACTGCGTGTCCTCCTTCAACCAGGATCCCT
CCAGCTGTGGGGAGGGGAGGGTCATCTTCACCAAACCAGTCCGAGGGGTCGAAGCCAGACACGAGAGGAAGAGGGTCCTGGGGAAGGTGGGAGAGCCAGG
CAGGGGCGGCCTTGGGAATCCTGCCACAGACAGGGGCGAGGGCCCTGTGGAGCTGGCCCATCTGGCCGGGCCCGGGAGCCCAGAGGCTGAGGAGTGGGGC
AGCCACCATGGAGGCCTGCAGGAGGTGGAGGCACTGTCAGGGTCTGTCCACAGTGGGTCTGTGCCAGGTCTCCCGCCGGTGGAAACTGTTGGCTTCCATG
GCAGCAGGAAGCGGAGTCGAGACCACTTCCGGAACAAGAGCAGCAGCCCCGAGGACCCAGGTGCTGAGGTCTGAGAGGGAGATGGCCCAGCCTGACCCCA
CTGGCCACTGCCATCCTGCTGCCTTCCCAGTGGGGCTGGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGT
GGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCTGGGGTGTGGGGTGTGGGCTGGAAGCACTGGCTCCCTGGTAGG
GACAATAAAGGTTTTGGGTCTTTCTGAGA
  • TSSC4.F10 (forward primer)
  • TSSC4.R7 (reverse primer)
  • Intron retention

Frame 0

GVEE*RGERMRTGLHVPTGVGSGGPVPCGSCSS
AGAEAVVLGRQSTRFPRGLSAPHGGAAPTKMETA
EQP*AGRFVVREDGPRGPAEPPGGHRAQL*YLS
SKAPLCSPTPVPRGRALGTHSILVRPGGLSSPT
GQCRGAPRASLAPRVRLFSGGEVLLAHIVEKGRA
LRSCGERDGFLQPTDMKESTLPSTRCRLSPRTP
RNGLPESLSCSPIPATRRSAPLTRLLLAAAAFR
CRGRECESGKQGSG*TPASSATYCVTWANYFPRP
VPASFKTVISGGCCVSPFTGVASSLRRVAPQRN
*VEQLNRGHAGALRGLRRPRLCR*GPSSGLRPL
GPLGCPITLQCQPLAPSSQERCGVALGTHG*GRN
R*AVPQRGGRTRDGV*HAAFRHSLPQ*LGL*PQ
LARWC*SGSTVPDGAAWGGGFRS**AALTPVR
P
PPSHGAAIPSERHELHLLPAQP*HL*LPGGGGQT
GSILCGPHQHE*QRRLQAAPSALRPVSSGRPGQ
GPSEPCLTKGASGPRLRGTPRALDQVQPGRCDR
GQRAEQSGHRPGLPGLPEPGCPH*LRVLLQPGSL
QLWGGEGHLHQTSPRGRSQTREEEGPGEGGRAR
QGRPWESCHRQGRGPCGAGPSGRAREPRG*GVG
QPPWRPAGGGGTVRVCPQWVCARSPAGGNCWLPW
QQEAESRPLPEQEQQPRGPRC*GLRGRWPSLTP
LATAILLPSQWGWSGGSLATA*LEWEEACRWHR
WPWLQFWAASSQAETLLKLLGCGVWAGSTGSLVG
TIKVLGLSE

Frame 1

AWRSRGASACAQDYTSRQASGAAAQFLVGAVVL
QARKPWCSAGRALGFPEG*ARRTEVRRRPRWRL
PSSLEPVGLW*GRTGRAGRPSLREVTERSFNT*A
RRPRCARRPPYLAAGPLGPTASL*GPEACPARL
DSAEGHREPAWHREFVCSLAGRSCWHI*WRKAG
LCVHVEKETASFSLRT*RSQLYLPLVAGFRREPR
ETDYRSPYLAARSPLPVGVPR*PGCFWPRRRSA
AEDGSANLGSRVLVELQLRLQHTV*LGQIISPA
PFLPALKRSSVGGAAYPLSLGWLLH*GESRLRGT
ELSS*TEAMPGHSEA*DDHACAAEDLHQGSVHL
ARLAVQSHSSVNHWHPAAKRGVAWPWGRMAEAG
TGEPSPSVEGEHGTEYDTLPSDTVSLSDSDSDLS
LPGGAEVEALSPMGLPGEEDSGPDEPPSPPS
GL
LPATVQPFHLRGMSSTFSQRSRDIFDCLEGAAR
RAPSSVAHTSMSDNGGFKRPLAPSGRSPVEGLGR
AHRSPASPRVPPVPDYVAHPERWTKYSLEDVTE
VSEQSNQATALAFLGSQSLAAPTDCVSSFNQDP
SSCGEGRVIFTKPVRGVEARHERKRVLGKVGEPG
RGGLGNPATDRGEGPVELAHLAGPGSPEAEEWG
SHHGGLQEVEALSGSVHSGSVPGLPPVETVGFH
GSRKRSRDHFRNKSSSPEDPGAEV*EGDGPA*PH
WPLPSCCLPSGAGQGAAWPLPSWNGRKPAGGTG
GPGCSSGQHPPKQRPC*SSWGVGCGLEALAPW*
GQ*RFWVFLR

Frame 2

RGGVEGRAHAHRTTRPDRRRERRPSSLWEL*FC
RRGSRGARPAEHSVSQRAERAARRCGADQDGDC
RAALSR*VCGEGGRAARAGRASGRSPSAALIPE
LEGPAVLADPRTSRPGPWDPQHPCEARRPVQPDW
TVPRGTESQLGTESSFVLWRGGLAGTYSGERPG
SAFMWRKRRLPSAYGHEGVNSTFHSLPAFAENP
EKRTTGVPILQPDPRYPSECPADQAASGRGGVPL
QRTGVRIWEAGFWLNSSFVCNILCDLGKLFPPP
RSCQL*NGHQWGVLRIPFHWGGFFTEESRASEE
LS*AAEQRPCRGTPRPETTTPVPLRTFIRAPSTW
PAWLSNHTPVSTTGTQQPREVWRGPGDAWLRQE
QVSRPPAWRANTGRSMTRCLPTQSPSVTRTLTS
ACPVVLKWKHCPRWGCLGRRIQVLMSRPHPRQ
AS
SQPRCSHSI*EA*APPSPSAAVTSLTAWRGRPD
GLHPLWPTPA*VTTEASSGP*RPQAGLQWKAWA
GPIGALPHQGCLRSPTTWHTPSAGPSTAWKM*PR
SASRAIRPPPWPSWAPRAWLPPLTACPPSTRIP
PAVGRGGSSSPNQSEGSKPDTRGRGSWGRWESQ
AGAALGILPQTGARALWSWPIWPGPGAQRLRSGA
ATMEACRRWRHCQGLSTVGLCQVSRRWKLLASM
AAGSGVETTSGTRAAAPRTQVLRSEREMAQPDP
TGHCHPAAFPVGLVRGQPGHCLAGMGGSLQVAPV
ALAAVLGSILPSRDLAEAPGVWGVGWKHWLPGR
DNKGFGSF*

Sequence TSSC4.gAug05

CCCTCCTCTTCCTGTTCTTGGTCAATTCCGGTCTTGTTTCCCCAACAAATGCCGTCGTTTCCGGGGCTGCTTCCGAGCCGGACCCAAGGGCCGGGGCGTG
GAGGAGTAGAGGGGCGAGCGCATGCGCACAGGACTACACGTCCCGACAGGCGTCGGGAGCGGCGGCCCAGTTCCTTGTGGGAGCTGTAGTTCTGCAGGCG
CGGAAGCCGTGGTGCTCGGCCGGCAGAGCACTCGGTTTCCCAGAGGGCTGAGCGCGCCGCACGGAGGTGCGGCGCCGACCAAGATGGAGACTGCCGAGCA
GCCTTGAGCCGGGCTGCTCAAGGTGATGGTCGACACCCCACTTTCCTGAGAGCTTGACCCTCAGATGCCAGGGCCTTGGCTGCAGATTCCTTGGGAGCTC
CCGGGGATCTTCCAGCAAATAGGAGCAAATCTTTTCCCCGTGGATCAGGAAGGTGCACGCTCTTTGTGGAATACGACTGCTCACCCCGCACAGCAAGCAG
CTTATAAGTGGCCCTCCTGCCTGATTTCAGCCCTGGGTTCAAGCCCTGGGTGGCTGCTTACTACCAAAATCGCTCAGTAGCTCCAAGCCTGCCTGCAGAG
GGTTGGCACCATTAAATGAGTTGAGCAGCTGAACAGAGGCCATGCCGGGGCACTCCGAGGCCTGAGACGACCACGCCTGTGCCGCTGAGGACCTTCATCA
GGGCTCCGTCCACTTGGCCCGCTTGGCTGTCCAATCACACTCCAGTGTCAACCACTGGCACCCAGCAGCCAAGAGAGGTGTGGCGTGGCCCTGGGGACGC
ATGGCTGAGGCAGGAACAGGTGAGCCGTCCCCCAGCGTGGAGGGCGAACACGGGACGGAGTATGACACGCTGCCTTCCGACACAGTCTCCCTCAGTGACT
CGGACTCTGACCTCAGCTTGCCCGGTGGTGCTGAAGTGGAAGCACTGTCCCCGATGGGGCTGCCTGGGGAGGAGGATTCAGGTCCTGATGAGCCGCCCTC
ACCCCCGTCAG
GCCTCCTCCCAGCCACGGTGCAGCCATTCCATCTGAGAGGCATGAGCTCCACCTTCTCCCAGCGCAGCCGTGACATCTTTGACTGCCTG
GAGGGGGCGGCCAGACGGGCTCCATCCTCTGTGGCCCACACCAGCATGAGTGACAACGGAGGCTTCAAGCGGCCCCTAGCGCCCTCAGGCCGGTCTCCAG
TGGAAGGCCTGGGCAGGGCCCATCGGAGCCCTGCCTCACCAAGGGTGCCTCCGGTCCCCGACTACGTGGCACACCCCGAGCGCTGGACCAAGTACAGCCT
GGAAGATGTGACCGAGGTCAGCGAGCAGAGCAATCAGGCCACCGCCCTGGCCTTCCTGGGCTCCCAGAGCCTGGCTGCCCCCACTGACTGCGTGTCCTCC
TTCAACCAGGATCCCTCCAGCTGTGGGGAGGGGAGGGTCATCTTCACCAAACCAGTCCGAGGGGTCGAAGCCAGACACGAGAGGAAGAGGGTCCTGGGGA
AGGTGGGAGAGCCAGGCAGGGGCGGCCTTGGGAATCCTGCCACAGACAGGGGCGAGGGCCCTGTGGAGCTGGCCCATCTGGCCGGGCCCGGGAGCCCAGA
GGCTGAGGAGTGGGGCAGCCACCATGGAGGCCTGCAGGAGGTGGAGGCACTGTCAGGGTCTGTCCACAGTGGGTCTGTGCCAGGTCTCCCGCCGGTGGAA
ACTGTTGGCTTCCATGGCAGCAGGAAGCGGAGTCGAGACCACTTCCGGAACAAGAGCAGCAGCCCCGAGGACCCAGGTGCTGAGGTCTGAGAGGGAGATG
GCCCAGCCTGACCCCACTGGCCACTGCCATCCTGCTGCCTTCCCAGTGGGGCTGGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCC
TGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCTGGGGTGTGGGGTGTGGGCTGGAAGCA
CTGGCTCCCTGGTAGGGACAATAAAGGTTTTGGGTCTTTCTGAGA
  • TSSC4.F10 (forward primer)
  • TSSC4.R7 (reverse primer)
  • Intron retention

Frame 0

PSSSCSWSIPVLFPQQMPSFPGLLPSRTQGPGR
GGVEGRAHAHRTTRPDRRRERRPSSLWEL*FCRR
GSRGARPAEHSVSQRAERAARRCGADQDGDCRA
ALSRAAQGDGRHPTFLRA*PSDARALAADSLGA
PGDLPANRSKSFPRGSGRCTLFVEYDCSPRTASS
L*VALLPDFSPGFKPWVAAYYQNRSVAPSLPAE
GWHH*MS*AAEQRPCRGTPRPETTTPVPLRTFI
RAPSTWPAWLSNHTPVSTTGTQQPREVWRGPGDA
WLRQEQVSRPPAWRANTGRSMTRCLPTQSPSVT
RTLTSACPVVLKWKHCPRWGCLGRRIQVLMSRP
HPRQ
ASSQPRCSHSI*EA*APPSPSAAVTSLTAW
RGRPDGLHPLWPTPA*VTTEASSGP*RPQAGLQ
WKAWAGPIGALPHQGCLRSPTTWHTPSAGPSTA
WKM*PRSASRAIRPPPWPSWAPRAWLPPLTACPP
STRIPPAVGRGGSSSPNQSEGSKPDTRGRGSWG
RWESQAGAALGILPQTGARALWSWPIWPGPGAQ
RLRSGAATMEACRRWRHCQGLSTVGLCQVSRRWK
LLASMAAGSGVETTSGTRAAAPRTQVLRSEREM
AQPDPTGHCHPAAFPVGLVRGQPGHCLAGMGGS
LQVAPVALAAVLGSILPSRDLAEAPGVWGVGWKH
WLPGRDNKGFGSF*

Frame 1

PPLPVLGQFRSCFPNKCRRFRGCFRAGPKGRGV
EE*RGERMRTGLHVPTGVGSGGPVPCGSCSSAG
AEAVVLGRQSTRFPRGLSAPHGGAAPTKMETAEQ
P*AGLLKVMVDTPLS*ELDPQMPGPWLQIPWEL
PGIFQQIGANLFPVDQEGARSLWNTTAHPAQQA
AYKWPSCLISALGSSPGWLLTTKIAQ*LQACLQR
VGTIK*VEQLNRGHAGALRGLRRPRLCR*GPSS
GLRPLGPLGCPITLQCQPLAPSSQERCGVALGT
HG*GRNR*AVPQRGGRTRDGV*HAAFRHSLPQ*L
GL*PQLARWC*SGSTVPDGAAWGGGFRS**AAL
TPVR
PPPSHGAAIPSERHELHLLPAQP*HL*LP
GGGGQTGSILCGPHQHE*QRRLQAAPSALRPVSS
GRPGQGPSEPCLTKGASGPRLRGTPRALDQVQP
GRCDRGQRAEQSGHRPGLPGLPEPGCPH*LRVL
LQPGSLQLWGGEGHLHQTSPRGRSQTREEEGPGE
GGRARQGRPWESCHRQGRGPCGAGPSGRAREPR
G*GVGQPPWRPAGGGGTVRVCPQWVCARSPAGG
NCWLPWQQEAESRPLPEQEQQPRGPRC*GLRGRW
PSLTPLATAILLPSQWGWSGGSLATA*LEWEEA
CRWHRWPWLQFWAASSQAETLLKLLGCGVWAGS
TGSLVGTIKVLGLSE

Frame 2

LLFLFLVNSGLVSPTNAVVSGAASEPDPRAGAW
RSRGASACAQDYTSRQASGAAAQFLVGAVVLQA
RKPWCSAGRALGFPEG*ARRTEVRRRPRWRLPS
SLEPGCSR*WSTPHFPESLTLRCQGLGCRFLGSS
RGSSSK*EQIFSPWIRKVHALCGIRLLTPHSKQ
LISGPPA*FQPWVQALGGCLLPKSLSSSKPACR
GLAPLNELSS*TEAMPGHSEA*DDHACAAEDLHQ
GSVHLARLAVQSHSSVNHWHPAAKRGVAWPWGR
MAEAGTGEPSPSVEGEHGTEYDTLPSDTVSLSD
SDSDLSLPGGAEVEALSPMGLPGEEDSGPDEPPS
PPS
GLLPATVQPFHLRGMSSTFSQRSRDIFDCL
EGAARRAPSSVAHTSMSDNGGFKRPLAPSGRSP
VEGLGRAHRSPASPRVPPVPDYVAHPERWTKYSL
EDVTEVSEQSNQATALAFLGSQSLAAPTDCVSS
FNQDPSSCGEGRVIFTKPVRGVEARHERKRVLG
KVGEPGRGGLGNPATDRGEGPVELAHLAGPGSPE
AEEWGSHHGGLQEVEALSGSVHSGSVPGLPPVE
TVGFHGSRKRSRDHFRNKSSSPEDPGAEV*EGD
GPA*PHWPLPSCCLPSGAGQGAAWPLPSWNGRKP
AGGTGGPGCSSGQHPPKQRPC*SSWGVGCGLEA
LAPW*GQ*RFWVFLR

Sequence TSSC4.eAug05

GGCGTGGAGGAGTAGAGGGGCGAGCGCATGCGCACAGGACTACACGTCCCGACAGGCGTCGGGAGCGGCGGCCCAGTTCCTTGTGGGAGCTGTAGTTCTG
CAGGCGCGGAAGCCGTGGTGCTCGGCCGGCAGAGCACTCGGTTTCCCAGAGGGCTGAGCGCGCCGCACGGAGGTGCGGCGCCGACCAAGATGGAGACTGC
CGAGCAGCCTTGAGCCGGTAGGTTTGTGGTGAGGGAGGACGGGCCGCGCGGGCCGGCCGAGCCTCCGGGAGGTCACCGAGCGCAGCTTTAATACCTGAGC
TCGAAGGCCCCGCTGTGCTCGCCGACCCCCGTACCTCGCGGCCGGGCCCTTGGGACCCACAGCATCCTTGTGAGGCCCGGAGGCCTGTCCAGCCCGACTG
GACAGTGCCGAGGGGCACCGAGAGCCAGCTTGGCACCGAGAGTTCGTTTGTTCTCTGGCGGGGAGGTCTTGCTGGCACATATAGTGGAGAAAGGCCGGGC
TCTGCGTTCATGTGGAGAAAGAGACGGCTTCCTTCAGCCTACGGACATGAAGGAGTCAACTCTACCTTCCACTCGTTGCCGGCTTTCGCCGAGAACCCCG
AGAAACGGACTACCGGAGTCCCTATCTTGCAGCCCGATCCCCGCTACCCGTCGGAGTGCCCCGCTGACCAGGCTGCTTCTGGCCGCGGCGGCGTTCCGCT
GCAGAGGACGGGAGTGCGAATCTGGGAAGCAGGGTTCTGGTTGAACTCCAGCTTCGTCTGCAACATACTGTGTGACTTGGGCAAATTATTTCCCCCGCCC
CGTTCCTGCCAGCTTTAAAACGGTCATCAGTGGGGGGTGCTGCGTATCCCCTTTCACTGGGGTGGCTTCTTCACTGAGGAGAGTCGCGCCTCAGAGGAAC
TGAGGTCCTGCCTGTGTTCGACCTGGTGGGGGGCACTAAGAGCCCCTGATAGTACCCCTGACCCCATCCTTATTGGGTGCACAAGACACAGGTCACTCTG
GGCGGGCAAGGAGTTTTGGTAGCAGGAGAGGAGTCGGTGGATGGATGGCTGAGGACAGTGCAGAAGGGTGTGGCTGGGCCGTCTTTTTTTGCCTGGAAAT
TCAAGTTCTGAGGCACCCAGTCACTCCAGCACTAAATGGGTGCAGGAGGCAGCACTTGTCTGCCCAGCTGGAAAGGCAGGGTATGTGCTGAGTGTTACAG
GTGGAAGGCCACTGGAGGTCGCTCCAGGAGCCGCGGGGATTTACCTCTGCCTAACAGGGCTGCTCAAGGTGATGGTCGACACCCCACTTTCCTGAGAGCT
TGACCCTCAGATGCCAGGGCCTTGGCTGCAGATTCCTTGGGAGCTCCCGGGGATCTTCCAGCAAATAGGAGCAAATCTTTTCCCCGTGGATCAGGAAGGT
GCACGCTCTTTGTGGAATACGACTGCTCACCCCGCACAGCAAGCAGCTTATAAGTGGCCCTCCTGCCTGATTTCAGCCCTGGGTTCAAGCCCTGGGTGGC
TGCTTACTACCAAAATCGCTCAGTAGCTCCAAGCCTGCCTGCAGAGGGTTGGCACCATTAAATGAGGTAACGAGTCAAAAGTCCCTACCCTGGGTCCTAG
CCTGTCAGGGGCTCCGAAAACCCAGGCTCAGGTCGGTCCTGCCCGGCACCTGTTTCACACATGTACACTCCGGTCTGAGGTTGGTCCTCTCCCCCACCCC
ACCCACCTGCAGTTGAGCAGCTGAACAGAGGCCATGCCGGGGCACTCCGAGGCCTGAGACGACCACGCCTGTGCCGCTGAGGACCTTCATCAGGGCTCCG
TCCACTTGGCCCGCTTGGCTGTCCAATCACACTCCAGTGTCAACCACTGGCACCCAGCAGCCAAGAGAGGTGTGGCGTGGCCCTGGGGACGCATGGCTGA
GGCAGGAACAGGTGAGCCGTCCCCCAGCGTGGAGGGCGAACACGGGACGGAGTATGACACGCTGCCTTCCGACACAGTCTCCCTCAGTGACTCGGACTCT
GACCTCAGCTTGCCCGGTGGTGCTGAAGTGGAAGCACTGTCCCCGATGGGGCTGCCTGGGGAGGAGGATTCAGGTCCTGATGAGCCGCCCTCACCCCCGT
CAG
GCCTCCTCCCAGCCACGGTGCAGCCATTCCATCTGAGAGGCATGAGCTCCACCTTCTCCCAGCGCAGCCGTGACATCTTTGACTGCCTGGAGGGGGC
GGCCAGACGGGCTCCATCCTCTGTGGCCCACACCAGCATGAGTGACAACGGAGGCTTCAAGCGGCCCCTAGCGCCCTCAGGCCGGTCTCCAGTGGAAGGC
CTGGGCAGGGCCCATCGGAGCCCTGCCTCACCAAGGGTGCCTCCGGTCCCCGACTACGTGGCACACCCCGAGCGCTGGACCAAGTACAGCCTGGAAGATG
TGACCGAGGTCAGCGAGCAGAGCAATCAGGCCACCGCCCTGGCCTTCCTGGGCTCCCAGAGCCTGGCTGCCCCCACTGACTGCGTGTCCTCCTTCAACCA
GGATCCCTCCAGCTGTGGGGAGGGGAGGGTCATCTTCACCAAACCAGTCCGAGGGGTCGAAGCCAGACACGAGAGGAAGAGGGTCCTGGGGAAGGTGGGA
GAGCCAGGCAGGGGCGGCCTTGGGAATCCTGCCACAGACAGGGGCGAGGGCCCTGTGGAGCTGGCCCATCTGGCCGGGCCCGGGAGCCCAGAGGCTGAGG
AGTGGGGCAGCCACCATGGAGGCCTGCAGGAGGTGGAGGCACTGTCAGGGTCTGTCCACAGTGGGTCTGTGCCAGGTCTCCCGCCGGTGGAAACTGTTGG
CTTCCATGGCAGCAGGAAGCGGAGTCGAGACCACTTCCGGAACAAGAGCAGCAGCCCCGAGGACCCAGGTGCTGAGGTCTGAGAGGGAGATGGCCCAGCC
TGACCCCACTGGCCACTGCCATCCTGCTGCCTTCCCAGTGGGGCTGGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTG
GCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCTGGGGTGTGGGGTGTGGGCTGGAAGCACTGGCTCC
CTGGTAGGGACAATAAAGGTTTTGGGTCTTTCTGAGA
  • TSSC4.F10 (forward primer)
  • TSSC4.R7 (reverse primer)
  • Intron retention

Frame 0

GVEE*RGERMRTGLHVPTGVGSGGPVPCGSCSS
AGAEAVVLGRQSTRFPRGLSAPHGGAAPTKMETA
EQP*AGRFVVREDGPRGPAEPPGGHRAQL*YLS
SKAPLCSPTPVPRGRALGTHSILVRPGGLSSPT
GQCRGAPRASLAPRVRLFSGGEVLLAHIVEKGRA
LRSCGERDGFLQPTDMKESTLPSTRCRLSPRTP
RNGLPESLSCSPIPATRRSAPLTRLLLAAAAFR
CRGRECESGKQGSG*TPASSATYCVTWANYFPRP
VPASFKTVISGGCCVSPFTGVASSLRRVAPQRN
*GPACVRPGGGH*EPLIVPLTPSLLGAQDTGHS
GRARSFGSRRGVGGWMAEDSAEGCGWAVFFCLEI
QVLRHPVTPALNGCRRQHLSAQLERQGMC*VLQ
VEGHWRSLQEPRGFTSA*QGCSR*WSTPHFPES
LTLRCQGLGCRFLGSSRGSSSK*EQIFSPWIRKV
HALCGIRLLTPHSKQLISGPPA*FQPWVQALGG
CLLPKSLSSSKPACRGLAPLNEVTSQKSLPWVL
ACQGLRKPRLRSVLPGTCFTHVHSGLRLVLSPTP
PTCS*AAEQRPCRGTPRPETTTPVPLRTFIRAP
STWPAWLSNHTPVSTTGTQQPREVWRGPGDAWL
RQEQVSRPPAWRANTGRSMTRCLPTQSPSVTRTL
TSACPVVLKWKHCPRWGCLGRRIQVLMSRPHPR
Q
ASSQPRCSHSI*EA*APPSPSAAVTSLTAWRG
RPDGLHPLWPTPA*VTTEASSGP*RPQAGLQWKA
WAGPIGALPHQGCLRSPTTWHTPSAGPSTAWKM
*PRSASRAIRPPPWPSWAPRAWLPPLTACPPST
RIPPAVGRGGSSSPNQSEGSKPDTRGRGSWGRWE
SQAGAALGILPQTGARALWSWPIWPGPGAQRLR
SGAATMEACRRWRHCQGLSTVGLCQVSRRWKLL
ASMAAGSGVETTSGTRAAAPRTQVLRSEREMAQP
DPTGHCHPAAFPVGLVRGQPGHCLAGMGGSLQV
APVALAAVLGSILPSRDLAEAPGVWGVGWKHWL
PGRDNKGFGSF*

Frame 1

AWRSRGASACAQDYTSRQASGAAAQFLVGAVVL
QARKPWCSAGRALGFPEG*ARRTEVRRRPRWRL
PSSLEPVGLW*GRTGRAGRPSLREVTERSFNT*A
RRPRCARRPPYLAAGPLGPTASL*GPEACPARL
DSAEGHREPAWHREFVCSLAGRSCWHI*WRKAG
LCVHVEKETASFSLRT*RSQLYLPLVAGFRREPR
ETDYRSPYLAARSPLPVGVPR*PGCFWPRRRSA
AEDGSANLGSRVLVELQLRLQHTV*LGQIISPA
PFLPALKRSSVGGAAYPLSLGWLLH*GESRLRGT
EVLPVFDLVGGTKSP**YP*PHPYWVHKTQVTL
GGQGVLVAGEESVDGWLRTVQKGVAGPSFFAWK
FKF*GTQSLQH*MGAGGSTCLPSWKGRVCAECYR
WKATGGRSRSRGDLPLPNRAAQGDGRHPTFLRA
*PSDARALAADSLGAPGDLPANRSKSFPRGSGR
CTLFVEYDCSPRTASSL*VALLPDFSPGFKPWVA
AYYQNRSVAPSLPAEGWHH*MR*RVKSPYPGS*
PVRGSENPGSGRSCPAPVSHMYTPV*GWSSPPP
HPPAVEQLNRGHAGALRGLRRPRLCR*GPSSGLR
PLGPLGCPITLQCQPLAPSSQERCGVALGTHG*
GRNR*AVPQRGGRTRDGV*HAAFRHSLPQ*LGL
*PQLARWC*SGSTVPDGAAWGGGFRS**AALTPV
R
PPPSHGAAIPSERHELHLLPAQP*HL*LPGGG
GQTGSILCGPHQHE*QRRLQAAPSALRPVSSGR
PGQGPSEPCLTKGASGPRLRGTPRALDQVQPGRC
DRGQRAEQSGHRPGLPGLPEPGCPH*LRVLLQP
GSLQLWGGEGHLHQTSPRGRSQTREEEGPGEGG
RARQGRPWESCHRQGRGPCGAGPSGRAREPRG*G
VGQPPWRPAGGGGTVRVCPQWVCARSPAGGNCW
LPWQQEAESRPLPEQEQQPRGPRC*GLRGRWPS
LTPLATAILLPSQWGWSGGSLATA*LEWEEACRW
HRWPWLQFWAASSQAETLLKLLGCGVWAGSTGS
LVGTIKVLGLSE

Frame 2

RGGVEGRAHAHRTTRPDRRRERRPSSLWEL*FC
RRGSRGARPAEHSVSQRAERAARRCGADQDGDC
RAALSR*VCGEGGRAARAGRASGRSPSAALIPE
LEGPAVLADPRTSRPGPWDPQHPCEARRPVQPDW
TVPRGTESQLGTESSFVLWRGGLAGTYSGERPG
SAFMWRKRRLPSAYGHEGVNSTFHSLPAFAENP
EKRTTGVPILQPDPRYPSECPADQAASGRGGVPL
QRTGVRIWEAGFWLNSSFVCNILCDLGKLFPPP
RSCQL*NGHQWGVLRIPFHWGGFFTEESRASEE
LRSCLCSTWWGALRAPDSTPDPILIGCTRHRSLW
AGKEFW*QERSRWMDG*GQCRRVWLGRLFLPGN
SSSEAPSHSSTKWVQEAALVCPAGKAGYVLSVT
GGRPLEVAPGAAGIYLCLTGLLKVMVDTPLS*EL
DPQMPGPWLQIPWELPGIFQQIGANLFPVDQEG
ARSLWNTTAHPAQQAAYKWPSCLISALGSSPGW
LLTTKIAQ*LQACLQRVGTIK*GNESKVPTLGPS
LSGAPKTQAQVGPARHLFHTCTLRSEVGPLPHP
THLQLSS*TEAMPGHSEA*DDHACAAEDLHQGS
VHLARLAVQSHSSVNHWHPAAKRGVAWPWGRMAE
AGTGEPSPSVEGEHGTEYDTLPSDTVSLSDSDS
DLSLPGGAEVEALSPMGLPGEEDSGPDEPPSPP
S
GLLPATVQPFHLRGMSSTFSQRSRDIFDCLEGA
ARRAPSSVAHTSMSDNGGFKRPLAPSGRSPVEG
LGRAHRSPASPRVPPVPDYVAHPERWTKYSLED
VTEVSEQSNQATALAFLGSQSLAAPTDCVSSFNQ
DPSSCGEGRVIFTKPVRGVEARHERKRVLGKVG
EPGRGGLGNPATDRGEGPVELAHLAGPGSPEAE
EWGSHHGGLQEVEALSGSVHSGSVPGLPPVETVG
FHGSRKRSRDHFRNKSSSPEDPGAEV*EGDGPA
*PHWPLPSCCLPSGAGQGAAWPLPSWNGRKPAG
GTGGPGCSSGQHPPKQRPC*SSWGVGCGLEALAP
W*GQ*RFWVFLR

Sequence TSSC4.bAug05

CCCTCCTCTTCCTGTTCTTGGTCAATTCCGGTCTTGTTTCCCCAACAAATGCCGTCGTTTCCGGGGCTGCTTCCGAGCCGGACCCAAGGGCCGGGGCGTG
GAGGAGTAGAGGGGCGAGCGCATGCGCACAGGACTACACGTCCCGACAGGCGTCGGGAGCGGCGGCCCAGTTCCTTGTGGGAGCTGTAGTTCTGCAGGCG
CGGAAGCCGTGGTGCTCGGCCGGCAGAGCACTCGGTTTCCCAGAGGGCTGAGCGCGCCGCACGGAGGTGCGGCGCCGACCAAGATGGAGACTGCCGAGCA
GCCTTGAGCCGGGCTGCTCAAGGTGATGGTCGACACCCCACTTTCCTGAGAGCTTGACCCTCAGATGCCAGGGCCTTGGCTGCAGATTCCTTGGGAGCTC
CCGGGGATCTTCCAGCAAATAGGAGCAAATCTTTTCCCCGTGGATCAGGAAGTTGAGCAGCTGAACAGAGGCCATGCCGGGGCACTCCGAGGCCTGAGAC
GACCACGCCTGTGCCGCTGAGGACCTTCATCAGGGCTCCGTCCACTTGGCCCGCTTGGCTGTCCAATCACACTCCAGTGTCAACCACTGGCACCCAGCAG
CCAAGAGAGGTGTGGCGTGGCCCTGGGGACGCATGGCTGAGGCAGGAACAGGTGAGCCGTCCCCCAGCGTGGAGGGCGAACACGGGACGGAGTATGACAC
GCTGCCTTCCGACACAGTCTCCCTCAGTGACTCGGACTCTGACCTCAGCTTGCCCGGTGGTGCTGAAGTGGAAGCACTGTCCCCGATGGGGCTGCCTGGG
GAGGAGGATTCAGGTCCTGATGAGCCGCCCTCACCCCCGTCAG
GCCTCCTCCCAGCCACGGTGCAGCCATTCCATCTGAGAGGCATGAGCTCCACCTTCT
CCCAGCGCAGCCGTGACATCTTTGACTGCCTGGAGGGGGCGGCCAGACGGGCTCCATCCTCTGTGGCCCACACCAGCATGAGTGACAACGGAGGCTTCAA
GCGGCCCCTAGCGCCCTCAGGCCGGTCTCCAGTGGAAGGCCTGGGCAGGGCCCATCGGAGCCCTGCCTCACCAAGGGTGCCTCCGGTCCCCGACTACGTG
GCACACCCCGAGCGCTGGACCAAGTACAGCCTGGAAGATGTGACCGAGGTCAGCGAGCAGAGCAATCAGGCCACCGCCCTGGCCTTCCTGGGCTCCCAGA
GCCTGGCTGCCCCCACTGACTGCGTGTCCTCCTTCAACCAGGATCCCTCCAGCTGTGGGGAGGGGAGGGTCATCTTCACCAAACCAGTCCGAGGGGTCGA
AGCCAGACACGAGAGGAAGAGGGTCCTGGGGAAGGTGGGAGAGCCAGGCAGGGGCGGCCTTGGGAATCCTGCCACAGACAGGGGCGAGGGCCCTGTGGAG
CTGGCCCATCTGGCCGGGCCCGGGAGCCCAGAGGCTGAGGAGTGGGGCAGCCACCATGGAGGCCTGCAGGAGGTGGAGGCACTGTCAGGGTCTGTCCACA
GTGGGTCTGTGCCAGGTCTCCCGCCGGTGGAAACTGTTGGCTTCCATGGCAGCAGGAAGCGGAGTCGAGACCACTTCCGGAACAAGAGCAGCAGCCCCGA
GGACCCAGGTGCTGAGGTCTGAGAGGGAGATGGCCCAGCCTGACCCCACTGGCCACTGCCATCCTGCTGCCTTCCCAGTGGGGCTGGTCAGGGGGCAGCC
TGGCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTGGCACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAA
GCTCCTGGGGTGTGGGGTGTGGGCTGGAAGCACTGGCTCCCTGGTAGGGACAATAAAGGTTTTGGGTCTTTCTGAGA
  • TSSC4.F10 (forward primer)
  • TSSC4.R7 (reverse primer)
  • Intron retention

Frame 0

PSSSCSWSIPVLFPQQMPSFPGLLPSRTQGPGR
GGVEGRAHAHRTTRPDRRRERRPSSLWEL*FCRR
GSRGARPAEHSVSQRAERAARRCGADQDGDCRA
ALSRAAQGDGRHPTFLRA*PSDARALAADSLGA
PGDLPANRSKSFPRGSGS*AAEQRPCRGTPRPET
TTPVPLRTFIRAPSTWPAWLSNHTPVSTTGTQQ
PREVWRGPGDAWLRQEQVSRPPAWRANTGRSMT
RCLPTQSPSVTRTLTSACPVVLKWKHCPRWGCLG
RRIQVLMSRPHPRQ
ASSQPRCSHSI*EA*APPS
PSAAVTSLTAWRGRPDGLHPLWPTPA*VTTEAS
SGP*RPQAGLQWKAWAGPIGALPHQGCLRSPTTW
HTPSAGPSTAWKM*PRSASRAIRPPPWPSWAPR
AWLPPLTACPPSTRIPPAVGRGGSSSPNQSEGS
KPDTRGRGSWGRWESQAGAALGILPQTGARALWS
WPIWPGPGAQRLRSGAATMEACRRWRHCQGLST
VGLCQVSRRWKLLASMAAGSGVETTSGTRAAAP
RTQVLRSEREMAQPDPTGHCHPAAFPVGLVRGQP
GHCLAGMGGSLQVAPVALAAVLGSILPSRDLAE
APGVWGVGWKHWLPGRDNKGFGSF*

Frame 1

PPLPVLGQFRSCFPNKCRRFRGCFRAGPKGRGV
EE*RGERMRTGLHVPTGVGSGGPVPCGSCSSAG
AEAVVLGRQSTRFPRGLSAPHGGAAPTKMETAEQ
P*AGLLKVMVDTPLS*ELDPQMPGPWLQIPWEL
PGIFQQIGANLFPVDQEVEQLNRGHAGALRGLR
RPRLCR*GPSSGLRPLGPLGCPITLQCQPLAPSS
QERCGVALGTHG*GRNR*AVPQRGGRTRDGV*H
AAFRHSLPQ*LGL*PQLARWC*SGSTVPDGAAW
GGGFRS**AALTPVR
PPPSHGAAIPSERHELHLL
PAQP*HL*LPGGGGQTGSILCGPHQHE*QRRLQ
AAPSALRPVSSGRPGQGPSEPCLTKGASGPRLR
GTPRALDQVQPGRCDRGQRAEQSGHRPGLPGLPE
PGCPH*LRVLLQPGSLQLWGGEGHLHQTSPRGR
SQTREEEGPGEGGRARQGRPWESCHRQGRGPCG
AGPSGRAREPRG*GVGQPPWRPAGGGGTVRVCPQ
WVCARSPAGGNCWLPWQQEAESRPLPEQEQQPR
GPRC*GLRGRWPSLTPLATAILLPSQWGWSGGS
LATA*LEWEEACRWHRWPWLQFWAASSQAETLLK
LLGCGVWAGSTGSLVGTIKVLGLSE

Frame 2

LLFLFLVNSGLVSPTNAVVSGAASEPDPRAGAW
RSRGASACAQDYTSRQASGAAAQFLVGAVVLQA
RKPWCSAGRALGFPEG*ARRTEVRRRPRWRLPS
SLEPGCSR*WSTPHFPESLTLRCQGLGCRFLGSS
RGSSSK*EQIFSPWIRKLSS*TEAMPGHSEA*D
DHACAAEDLHQGSVHLARLAVQSHSSVNHWHPA
AKRGVAWPWGRMAEAGTGEPSPSVEGEHGTEYDT
LPSDTVSLSDSDSDLSLPGGAEVEALSPMGLPG
EEDSGPDEPPSPPS
GLLPATVQPFHLRGMSSTF
SQRSRDIFDCLEGAARRAPSSVAHTSMSDNGGFK
RPLAPSGRSPVEGLGRAHRSPASPRVPPVPDYV
AHPERWTKYSLEDVTEVSEQSNQATALAFLGSQ
SLAAPTDCVSSFNQDPSSCGEGRVIFTKPVRGVE
ARHERKRVLGKVGEPGRGGLGNPATDRGEGPVE
LAHLAGPGSPEAEEWGSHHGGLQEVEALSGSVH
SGSVPGLPPVETVGFHGSRKRSRDHFRNKSSSPE
DPGAEV*EGDGPA*PHWPLPSCCLPSGAGQGAA
WPLPSWNGRKPAGGTGGPGCSSGQHPPKQRPC*
SSWGVGCGLEALAPW*GQ*RFWVFLR

Sequence TSSC4.aAug05

CCCTCCTCTTCCTGTTCTTGGTCAATTCCGGTCTTGTTTCCCCAACAAATGCCGTCGTTTCCGGGGCTGCTTCCGAGCCGGACCCAAGGGCCGGGGCGTG
GAGGAGTAGAGGGGCGAGCGCATGCGCACAGGACTACACGTCCCGACAGGCGTCGGGAGCGGCGGCCCAGTTCCTTGTGGGAGCTGTAGTTCTGCAGGCG
CGGAAGCCGTGGTGCTCGGCCGGCAGAGCACTCGGTTTCCCAGAGGGCTGAGCGCGCCGCACGGAGGTGCGGCGCCGACCAAGATGGAGACTGCCGAGCA
GCCTTGAGCCGTTGAGCAGCTGAACAGAGGCCATGCCGGGGCACTCCGAGGCCTGAGACGACCACGCCTGTGCCGCTGAGGACCTTCATCAGGGCTCCGT
CCACTTGGCCCGCTTGGCTGTCCAATCACACTCCAGTGTCAACCACTGGCACCCAGCAGCCAAGAGAGGTGTGGCGTGGCCCTGGGGACGCATGGCTGAG
GCAGGAACAGGTGAGCCGTCCCCCAGCGTGGAGGGCGAACACGGGACGGAGTATGACACGCTGCCTTCCGACACAGTCTCCCTCAGTGACTCGGACTCTG
ACCTCAGCTTGCCCGGTGGTGCTGAAGTGGAAGCACTGTCCCCGATGGGGCTGCCTGGGGAGGAGGATTCAGGTCCTGATGAGCCGCCCTCACCCCCGTC
AG
GCCTCCTCCCAGCCACGGTGCAGCCATTCCATCTGAGAGGCATGAGCTCCACCTTCTCCCAGCGCAGCCGTGACATCTTTGACTGCCTGGAGGGGGCG
GCCAGACGGGCTCCATCCTCTGTGGCCCACACCAGCATGAGTGACAACGGAGGCTTCAAGCGGCCCCTAGCGCCCTCAGGCCGGTCTCCAGTGGAAGGCC
TGGGCAGGGCCCATCGGAGCCCTGCCTCACCAAGGGTGCCTCCGGTCCCCGACTACGTGGCACACCCCGAGCGCTGGACCAAGTACAGCCTGGAAGATGT
GACCGAGGTCAGCGAGCAGAGCAATCAGGCCACCGCCCTGGCCTTCCTGGGCTCCCAGAGCCTGGCTGCCCCCACTGACTGCGTGTCCTCCTTCAACCAG
GATCCCTCCAGCTGTGGGGAGGGGAGGGTCATCTTCACCAAACCAGTCCGAGGGGTCGAAGCCAGACACGAGAGGAAGAGGGTCCTGGGGAAGGTGGGAG
AGCCAGGCAGGGGCGGCCTTGGGAATCCTGCCACAGACAGGGGCGAGGGCCCTGTGGAGCTGGCCCATCTGGCCGGGCCCGGGAGCCCAGAGGCTGAGGA
GTGGGGCAGCCACCATGGAGGCCTGCAGGAGGTGGAGGCACTGTCAGGGTCTGTCCACAGTGGGTCTGTGCCAGGTCTCCCGCCGGTGGAAACTGTTGGC
TTCCATGGCAGCAGGAAGCGGAGTCGAGACCACTTCCGGAACAAGAGCAGCAGCCCCGAGGACCCAGGTGCTGAGGTCTGAGAGGGAGATGGCCCAGCCT
GACCCCACTGGCCACTGCCATCCTGCTGCCTTCCCAGTGGGGCTGGTCAGGGGGCAGCCTGGCCACTGCCTAGCTGGAATGGGAGGAAGCCTGCAGGTGG
CACCGGTGGCCCTGGCTGCAGTTCTGGGCAGCATCCTCCCAAGCAGAGACCTTGCTGAAGCTCCTGGGGTGTGGGGTGTGGGCTGGAAGCACTGGCTCCC
TGGTAGGGACAATAAAGGTTTTGGGTCTTTCTGAGA
  • TSSC4.F10 (forward primer)
  • TSSC4.R7 (reverse primer)
  • Intron retention

Frame 0

PSSSCSWSIPVLFPQQMPSFPGLLPSRTQGPGR
GGVEGRAHAHRTTRPDRRRERRPSSLWEL*FCRR
GSRGARPAEHSVSQRAERAARRCGADQDGDCRA
ALSR*AAEQRPCRGTPRPETTTPVPLRTFIRAP
STWPAWLSNHTPVSTTGTQQPREVWRGPGDAWLR
QEQVSRPPAWRANTGRSMTRCLPTQSPSVTRTL
TSACPVVLKWKHCPRWGCLGRRIQVLMSRPHPR
Q
ASSQPRCSHSI*EA*APPSPSAAVTSLTAWRGR
PDGLHPLWPTPA*VTTEASSGP*RPQAGLQWKA
WAGPIGALPHQGCLRSPTTWHTPSAGPSTAWKM
*PRSASRAIRPPPWPSWAPRAWLPPLTACPPSTR
IPPAVGRGGSSSPNQSEGSKPDTRGRGSWGRWE
SQAGAALGILPQTGARALWSWPIWPGPGAQRLR
SGAATMEACRRWRHCQGLSTVGLCQVSRRWKLLA
SMAAGSGVETTSGTRAAAPRTQVLRSEREMAQP
DPTGHCHPAAFPVGLVRGQPGHCLAGMGGSLQV
APVALAAVLGSILPSRDLAEAPGVWGVGWKHWLP
GRDNKGFGSF*

Frame 1

PPLPVLGQFRSCFPNKCRRFRGCFRAGPKGRGV
EE*RGERMRTGLHVPTGVGSGGPVPCGSCSSAG
AEAVVLGRQSTRFPRGLSAPHGGAAPTKMETAEQ
P*AVEQLNRGHAGALRGLRRPRLCR*GPSSGLR
PLGPLGCPITLQCQPLAPSSQERCGVALGTHG*
GRNR*AVPQRGGRTRDGV*HAAFRHSLPQ*LGL*
PQLARWC*SGSTVPDGAAWGGGFRS**AALTPV
R
PPPSHGAAIPSERHELHLLPAQP*HL*LPGGG
GQTGSILCGPHQHE*QRRLQAAPSALRPVSSGRP
GQGPSEPCLTKGASGPRLRGTPRALDQVQPGRC
DRGQRAEQSGHRPGLPGLPEPGCPH*LRVLLQP
GSLQLWGGEGHLHQTSPRGRSQTREEEGPGEGGR
ARQGRPWESCHRQGRGPCGAGPSGRAREPRG*G
VGQPPWRPAGGGGTVRVCPQWVCARSPAGGNCW
LPWQQEAESRPLPEQEQQPRGPRC*GLRGRWPSL
TPLATAILLPSQWGWSGGSLATA*LEWEEACRW
HRWPWLQFWAASSQAETLLKLLGCGVWAGSTGS
LVGTIKVLGLSE

Frame 2

LLFLFLVNSGLVSPTNAVVSGAASEPDPRAGAW
RSRGASACAQDYTSRQASGAAAQFLVGAVVLQA
RKPWCSAGRALGFPEG*ARRTEVRRRPRWRLPS
SLEPLSS*TEAMPGHSEA*DDHACAAEDLHQGSV
HLARLAVQSHSSVNHWHPAAKRGVAWPWGRMAE
AGTGEPSPSVEGEHGTEYDTLPSDTVSLSDSDS
DLSLPGGAEVEALSPMGLPGEEDSGPDEPPSPPS
GLLPATVQPFHLRGMSSTFSQRSRDIFDCLEGA
ARRAPSSVAHTSMSDNGGFKRPLAPSGRSPVEG
LGRAHRSPASPRVPPVPDYVAHPERWTKYSLEDV
TEVSEQSNQATALAFLGSQSLAAPTDCVSSFNQ
DPSSCGEGRVIFTKPVRGVEARHERKRVLGKVG
EPGRGGLGNPATDRGEGPVELAHLAGPGSPEAEE
WGSHHGGLQEVEALSGSVHSGSVPGLPPVETVG
FHGSRKRSRDHFRNKSSSPEDPGAEV*EGDGPA
*PHWPLPSCCLPSGAGQGAAWPLPSWNGRKPAGG
TGGPGCSSGQHPPKQRPC*SSWGVGCGLEALAP
W*GQ*RFWVFLR

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