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Sequences

Sequence C11ORF4.aAug05

GGCTATGGGCGGAAGTTTTCTTCAGAGACCGAGGGACGGGAATCCGTTGCCGCCCCCGGCCGGGCGGCACGACCCCGATTTGGGTATAGGAGAGAGGAGC
GTGGGAACTGGCGGACCCCCATACAAGTAAAGGCGGGCGGCACGGGGCACGGCCCACCCGGGGACCCCCTGGATGCGGCACGGCCCCCGCAACTCGGCCG
CCCTCCTGCCGCCTCCCGTAACCCCGGGCGCCCGCCAGCGGCGCAGCTCGCGCCAATTCTCGTACGGTTTCACGCCGGGTGCGGCGCTGGACTGCGGAGC
CAGCCGGGCCGCTGCGCAATTTGCGTAGCGAACGGCGCCCGCGCAGGCGCGGAGGGGGAGGGGGGCGGAGCAGCGGGAGCCGGGGAGCCGGAGCCCCGGG
TCCCCACGACCTGAGCCGGCTCTCCCATCAGCGGCCTGAGGACCTGGCGTCCGCCTCCTCCCTCCCCTTGAGGCTGGAGCGTGGACGCGGTGGGGGAGGG
TGGGGCGGGGGCAGCTTTCGAGAATTACGAGGACAGGAGGCAGAGGCCCTCCCCATCCGCATTATTGGAGGAGAGAGAGCCTCCCCCAGCTTGGGGAGGG
GGAGAGCGGGGCATTGGGCGCCCCTCGCAGCGGCCGCTGCCCTGACCCGACGGGTATCAGCCGGCTCTCCCCCTCCACCCAGGACGACATGAACGACCGA
GGCCAGGGAGTCCTCTCCTTGGGCCTCTGCATCCCCCCATCCTTGGCTCTGGGGTAGGCCCAGGGAGGAGACACCCCCAACCCCTATCCGGTCTGTCCTG
GAGAAAAGAGACTGCCCTTCCATGCCCCTGAGTGAGGGGCCTGGGGCCCAGGCTGCCTGTGTTCCCCAAGGGCAAGGGTCTCTCTGTTGAGGAGGAGGGG
CCTGTCAGCCACAACTTCTTTCCTCCTGAGCGCCCCATCTCCCTCTCTGCACCCTGCAATTCCCACCCCTCCGTATTTATTTCCCTGGTCCCGCCGACAG
TCCCTCCTTGTCTGTCTCCGGGATTCAGGCCTCCCTCCCTGACATGGAGAGTAACCTGTCTGGCCTGGTGCCTGCTGCCGGGCTGGTGCCTGCGCTGCCA
CCTGCTGTGACCCTGGGGCTGACAGCTGCCTACACCACCCTGTATGCCCTGCTCTTCTTCTCCGTCTATGCCCAGCTCTGGCTGGTGCTTCTGTATGGGC
ACAAGCGTCTCAGCTATCAGACGGTGTTCCTGGCCCTCTGTCTGCTCTGGGCCGCCTTGCGTACCACCCTCTTCTCCTTCTACTTCCGAGATACTCCCCG
CGCCAACCGCCTGGGGCCCTTGCCCTTCTGGCTTCTCTACTGCTGCCCCGTCTGCCTGCAGTTCTTCACCTTGACGCTTATGAACCTCTACTTTGCCCAG
GTGGTGTTCAAGGCCAAGGTGAAGCGTCGGCCGGAGATGAGCCGAGGCTTGCTCGCTGTCCGAGGGGCCTTTGTGGGGGCCTCGCTGCTCTTTCTGCTGG
TGAACGTGCTGTGTGCTGTGCTCTCCCATCGGCGCCGGGCACAGCCCTGGGCCCTGCTGCTTGTCCGCGTCCTGGTGAGCGACTCCCTGTTCGTCATCTG
CGCGCTGTCTCTTGCTGCCTGCCTCTGCCTCGTCGCCAGGCGGGCGCCCTCCACTAGCATCTACCTGGAGGCCAAGGGGACCAGTGTGTGCCAGGCGGCC
GCGATGGGTGGCGCCATGGTCCTGCTCTATGCCAGCCGGGCCTGCTACAACCTGACAGCACTGGCCTTGGCCCCCCAGAGCCGGCTGGACACCTTCGATT
ACGACTGGTACAATGTGTCTGACCAGGCGGACCTGGTGAATGACCTGGGGAACAAAGGCTACCTGGTATTTGGCCTCATCCTCTTCGTGTGGGAGCTACT
GCCCACCACCCTGCTGGTGGGCTTCTTCCGGGTGCACCGGCCCCCACAGGACCTGAGCACCAGCCACATCCTCAATGGGCAGGTCTTTGCCTCTCGGTCC
TACTTCTTTGACCGGGCTGGGCACTGTGAAGATGAGGGCTGCTCCTGGGAGCACAGCCGGGGTGAGAGCACCAGTATGTCGGGCAGTCTAGGCTCTGGGA
GCTGGTATGGTGCCATCGGGCGTGAGCCGGGCTGGTATGGGGGCAGCCAGACGAAGACCACTCCTCTGCTCTTCTCCCAGGTGCCAGGACCAGGCGGCCA
CCACCACAGTCTCTACTCCACCCCACAGACGTGATCCCCCTCCCTCCCCCACAGAATACCCAGGCCCCAGTCCCCCTCACCCTAGGCCCCTGTGCCAAGT
TTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTGGCTACCCCCTCCTCTGGCCGGCTCCTTGCTGCTCCTGTCATAGTGAGCTTGTGCCGTCCCCC
TAGGATGGGGGGCATGGCCCTGGCTGCCAGATGCCCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACCTCTCCTGTGCC
TGCCACTCAATAAACAGTGTCTGCGCCCCACAGTTGTG
  • C11ORF4.F1 (forward primer)
  • C11ORF4.R14 (reverse primer)
  • Intron retention

Frame 0

GYGRKFSSETEGRESVAAPGRAARPRFGYRREE
RGNWRTPIQVKAGGTGHGPPGDPLDAARPPQLGR
PPAASRNPGRPPAAQLAPILVRFHAGCGAGLRS
QPGRCAICVANGARAGAEGEGGGAAGAGEPEPR
VPTT*AGSPISGLRTWRPPPPSP*GWSVDAVGEG
GAGAAFENYEDRRQRPSPSALLEEREPPPAWGG
GERGIGRPSQRPLP*PDGYQPALPLHPGRHERP
RPGSPLLGPLHPPILGSGVGPGRRHPQPLSGLSW
RKETALPCP*VRGLGPRLPVFPKGKGLSVEEEG
PVSHNFFPPERPISLSAPCNSHPSVFISLVPPT
VPPCLSPGFRPPSLTWRVTCLAWCLLPGWCLRCH
LL*PWG*QLPTPPCMPCSSSPSMPSSGWCFCMG
TSVSAIRRCSWPSVCSGPPCVPPSSPSTSEILP
APTAWGPCPSGFSTAAPSACSSSP*RL*TSTLPR
WCSRPR*SVGRR*AEACSLSEGPLWGPRCSFCW
*TCCVLCSPIGAGHSPGPCCLSASW*ATPCSSS
ARCLLLPASASSPGGRPPLASTWRPRGPVCARRP
RWVAPWSCSMPAGPATT*QHWPWPPRAGWTPSI
TTGTMCLTRRTW*MTWGTKATWYLASSSSCGSY
CPPPCWWASSGCTGPHRT*APATSSMGRSLPLGP
TSLTGLGTVKMRAAPGSTAGVRAPVCRAV*ALG
AGMVPSGVSRAGMGAARRRPLLCSSPRCQDQAA
TTTVSTPPHRRDPPPSPTEYPGPSPPHPRPLCQV
CLPLLAQDPGGRGYPLLWPAPCCSCHSELVPSP
*DGGHGPGCQMPTAPWHDLPPLLPHRSQLPLLC
LPLNKQCLRPTVV

Frame 1

AMGGSFLQRPRDGNPLPPPAGRHDPDLGIGERS
VGTGGPPYK*RRAARGTAHPGTPWMRHGPRNSA
ALLPPPVTPGARQRRSSRQFSYGFTPGAALDCGA
SRAAAQFA*RTAPAQARRGRGAEQREPGSRSPG
SPRPEPALPSAA*GPGVRLLPPLEAGAWTRWGR
VGRGQLSRITRTGGRGPPHPHYWRRESLPQLGEG
ESGALGAPRSGRCPDPTGISRLSPSTQDDMNDR
GQGVLSLGLCIPPSLALG*AQGGDTPNPYPVCP
GEKRLPFHAPE*GAWGPGCLCSPRARVSLLRRRG
LSATTSFLLSAPSPSLHPAIPTPPYLFPWSRRQ
SLLVCLRDSGLPP*HGE*PVWPGACCRAGACAA
TCCDPGADSCLHHPVCPALLLRLCPALAGASVWA
QASQLSDGVPGPLSALGRLAYHPLLLLLPRYSP
RQPPGALALLASLLLPRLPAVLHLDAYEPLLCP
GGVQGQGEASAGDEPRLARCPRGLCGGLAALSAG
ERAVCCALPSAPGTALGPAACPRPGERLPVRHL
RAVSCCLPLPRRQAGALH*HLPGGQGDQCVPGG
RDGWRHGPALCQPGLLQPDSTGLGPPEPAGHLRL
RLVQCV*PGGPGE*PGEQRLPGIWPHPLRVGAT
AHHPAGGLLPGAPAPTGPEHQPHPQWAGLCLSV
LLL*PGWAL*R*GLLLGAQPG*EHQYVGQSRLWE
LVWCHRA*AGLVWGQPDEDHSSALLPGARTRRP
PPQSLLHPTDVIPLPPPQNTQAPVPLTLGPCAK
FVCRFLPRILGVVATPSSGRLLAAPVIVSLCRPP
RMGGMALAARCPQHPGMTCHLCFHTGASYLSCA
CHSINSVCAPQL

Frame 2

LWAEVFFRDRGTGIRCRPRPGGTTPIWV*ERGA
WELADPHTSKGGRHGARPTRGPPGCGTAPATRP
PSCRLP*PRAPASGAARANSRTVSRRVRRWTAE
PAGPLRNLRSERRPRRRGGGGGRSSGSRGAGAPG
PHDLSRLSHQRPEDLASASSLPLRLERGRGGGG
WGGGSFRELRGQEAEALPIRIIGGERASPSLGR
GRAGHWAPLAAAAALTRRVSAGSPPPPRTT*TTE
ARESSPWASASPHPWLWGRPREETPPTPIRSVL
EKRDCPSMPLSEGPGAQAACVPQGQGSLC*GGG
ACQPQLLSS*APHLPLCTLQFPPLRIYFPGPADS
PSLSVSGIQASLPDMESNLSGLVPAAGLVPALP
PAVTLGLTAAYTTLYALLFFSVYAQLWLVLLYG
HKRLSYQTVFLALCLLWAALRTTLFSFYFRDTPR
ANRLGPLPFWLLYCCPVCLQFFTLTLMNLYFAQ
VVFKAKVKRRPEMSRGLLAVRGAFVGASLLFLL
VNVLCAVLSHRRRAQPWALLLVRVLVSDSLFVIC
ALSLAACLCLVARRAPSTSIYLEAKGTSVCQAA
AMGGAMVLLYASRACYNLTALALAPQSRLDTFD
YDWYNVSDQADLVNDLGNKGYLVFGLILFVWELL
PTTLLVGFFRVHRPPQDLSTSHILNGQVFASRS
YFFDRAGHCEDEGCSWEHSRGESTSMSGSLGSG
SWYGAIGREPGWYGGSQTKTTPLLFSQVPGPGGH
HHSLYSTPQT*SPSLPHRIPRPQSPSP*APVPS
LSAASCPGSWGSWLPPPLAGSLLLLS**ACAVP
LGWGAWPWLPDAHSTLA*PATSASTPEPATSPVP
ATQ*TVSAPHSC

Sequence C11ORF4.dAug05

GCTTTATTAACATTTGGTAGTGAGCACGGCCCCCAGGGCATCGCGGGGGCTCGGGTCCCGGTGACGCAACGGTTAAACCTGGCTCGCGACTTAGCGCAGG
CGCCTGGGGGAAAGCCCGGAGCCTGAGGGCGGGGCCACGGAGCCACTTCCGGCGGCTGTGGGCGGAAAACCCAAAACTTCCGATGGGACCAAGCCTTCCG
TGGCTTCACACGCACCGGAAGGGAATCTGGGTCAGCCCTCCCTCCAAAGGAGACAGCACGGATCCTCTTTTTGCATAGGCCTGAGGGAAGTACTTCCGCC
CATATTCAAGATGGCTGCCCAGGGCAGTGGGAACGGGTGGAGTTTCGGGATGTGGAGCGAAGGTCACTGGGAGGGGGCGGAGCTTCCCCTGCCCAAGTTC
CGATCCCACCAGGACTGGAAGACTCGCGTCCAGCTGGAGCTTTGCCGCATCTGCGTTGCTGTGCCCGCGCTCTTCGGGCGAGGAAGTCCCTTCTGGTGGA
GGGAGAAAAGGGTTACATGAGTTAGATTACCATGGCAGCTCGAGCCAGGCTCTCCACTTCCGTGAGCCTTCCTCTAAGTGAGATCGGGGGGGAGATAATG
AAGGCCACAACTCCCAGGAGGCTCCACGCCGGGCGGTCAGGGACGCTCGCGAGGACGCATGGGCCCCCAGGAATGGGAACTGGTTAGATCCCAGGAACTC
CGTGCCGGAGACGGGAAGAGAGGATGCCTAGGGCCCTAAATGGAAAGGCCAGAGCTGGAGACCTAGCACCCAGAAGATGAGACCGCAATTCGAGAATCAA
AGGGCCGGGAGCGATGGCCTCCCTCCCTGACATGGAGAGTAACCTGTCTGGCCTGGTGCCTGCTGCCGGGCTGGTGCCTGCGCTGCCACCTGCTGTGACC
CTGGGGCTGACAGCTGCCTACACCACCCTGTATGCCCTGCTCTTCTTCTCCGTCTATGCCCAGCTCTGGCTGGTGCTTCTGTATGGGCACAAGCGTCTCA
GCTATCAGACGGTGTTCCTGGCCCTCTGTCTGCTCTGGGCCGCCTTGCGTACCACCCTCTTCTCCTTCTACTTCCGAGATACTCCCCGCGCCAACCGCCT
GGGGCCCTTGCCCTTCTGGCTTCTCTACTGCTGCCCCGTCTGCCTGCAGTTCTTCACCTTGACGCTTATGAACCTCTACTTTGCCCAGGTGGTGTTCAAG
GCCAAGGTGAAGCGTCGGCCGGAGATGAGCCGAGGCTTGCTCGCTGTCCGAGGGGCCTTTGTGGGGGCCTCGCTGCTCTTTCTGCTGGTGAACGTGCTGT
GTGCTGTGCTCTCCCATCGGCGCCGGGCACAGCCCTGGGCCCTGCTGCTTGTCCGCGTCCTGGTGAGCGACTCCCTGTTCGTCATCTGCGCGCTGTCTCT
TGCTGCCTGCCTCTGCCTCGTCGCCAGGCGGGCGCCCTCCACTAGCATCTACCTGGAGGCCAAGGGGACCAGTGTGTGCCAGGCGGCCGCGATGGGTGGC
GCCATGGTCCTGCTCTATGCCAGCCGGGCCTGCTACAACCTGACAGCACTGGCCTTGGCCCCCCAGAGCCGGCTGGACACCTTCGATTACGACTGGTACA
ATGTGTCTGACCAGGTGGGCATACGCATGTCTGCCACCTCCTTAGTAGCCGTGGCACCTTGGCCCCAGCTGGCCTGGGCCCTGTCCCACTACCCCTTTGG
CGTGACTGCAGACTGGCACCAGCCCCTGCCTTCCCACAGGCGGACCTGGTGAATGACCTGGGGAACAAAGGCTACCTGGTATTTGGCCTCATCCTCTTCG
TGTGGGAGCTACTGCCCACCACCCTGCTGGTGGGCTTCTTCCGGGTGCACCGGCCCCCACAGGACCTGAGCACCAGCCACATCCTCAATGGGCAGGTCTT
TGCCTCTCGGTCCTACTTCTTTGACCGGGCTGGGCACTGTGAAGATGAGGGCTGCTCCTGGGAGCACAGCCGGGGTGAGAGCACCAGTATGTCGGGCAGT
CTAGGCTCTGGGAGCTGGTATGGTGCCATCGGGCGTGAGCCGGGCTGGTATGGGGGCAGCCAGACGAAGACCACTCCTCTGCTCTTCTCCCAGGTGCCAG
GACCAGGCGGCCACCACCACAGTCTCTACTCCACCCCACAGACGTGATCCCCCTCCCTCCCCCACAGAATACCCAGGCCCCAGTCCCCCTCACCCTAGGC
CCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTGGCTACCCCCTCCTCTGGCCGGCTCCTTGCTGCTCCTGTCATAGTGAGCT
TGTGCCGTCCCCCTAGGATGGGGGGCATGGCCCTGGCTGCCAGATGCCCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTA
CCTCTCCTGTGCCTGCCACTCAATAAACAGTGTCTGCGCCCCACAGTTGTG
  • C11ORF4.F1 (forward primer)
  • C11ORF4.R14 (reverse primer)
  • Intron retention

Frame 0

ALLTFGSEHGPQGIAGARVPVTQRLNLARDLAQ
APGGKPGA*GRGHGATSGGCGRKTQNFRWDQAFR
GFTRTGRESGSALPPKETARILFLHRPEGSTSA
HIQDGCPGQWERVEFRDVERRSLGGGGASPAQV
PIPPGLEDSRPAGALPHLRCCARALRARKSLLVE
GEKGYMS*ITMAARARLSTSVSLPLSEIGGEIM
KATTPRRLHAGRSGTLARTHGPPGMGTG*IPGT
PCRRREERMPRALNGKARAGDLAPRR*DRNSRIK
GPGAMASLPDMESNLSGLVPAAGLVPALPPAVT
LGLTAAYTTLYALLFFSVYAQLWLVLLYGHKRL
SYQTVFLALCLLWAALRTTLFSFYFRDTPRANRL
GPLPFWLLYCCPVCLQFFTLTLMNLYFAQVVFK
AKVKRRPEMSRGLLAVRGAFVGASLLFLLVNVL
CAVLSHRRRAQPWALLLVRVLVSDSLFVICALSL
AACLCLVARRAPSTSIYLEAKGTSVCQAAAMGG
AMVLLYASRACYNLTALALAPQSRLDTFDYDWY
NVSDQVGIRMSATSLVAVAPWPQLAWALSHYPFG
VTADWHQPLPSHRRTW*MTWGTKATWYLASSSS
CGSYCPPPCWWASSGCTGPHRT*APATSSMGRS
LPLGPTSLTGLGTVKMRAAPGSTAGVRAPVCRAV
*ALGAGMVPSGVSRAGMGAARRRPLLCSSPRCQ
DQAATTTVSTPPHRRDPPPSPTEYPGPSPPHPR
PLCQVCLPLLAQDPGGRGYPLLWPAPCCSCHSEL
VPSP*DGGHGPGCQMPTAPWHDLPPLLPHRSQL
PLLCLPLNKQCLRPTVV

Frame 1

LY*HLVVSTAPRASRGLGSR*RNG*TWLAT*RR
RLGESPEPEGGATEPLPAAVGGKPKTSDGTKPS
VASHAPEGNLGQPSLQRRQHGSSFCIGLREVLPP
IFKMAAQGSGNGWSFGMWSEGHWEGAELPLPKF
RSHQDWKTRVQLELCRICVAVPALFGRGSPFWW
REKRVT*VRLPWQLEPGSPLP*AFL*VRSGGR**
RPQLPGGSTPGGQGRSRGRMGPQEWELVRSQEL
RAGDGKRGCLGP*MERPELET*HPEDETAIRES
KGRERWPPSLTWRVTCLAWCLLPGWCLRCHLL*P
WG*QLPTPPCMPCSSSPSMPSSGWCFCMGTSVS
AIRRCSWPSVCSGPPCVPPSSPSTSEILPAPTA
WGPCPSGFSTAAPSACSSSP*RL*TSTLPRWCSR
PR*SVGRR*AEACSLSEGPLWGPRCSFCW*TCC
VLCSPIGAGHSPGPCCLSASW*ATPCSSSARCL
LLPASASSPGGRPPLASTWRPRGPVCARRPRWVA
PWSCSMPAGPATT*QHWPWPPRAGWTPSITTGT
MCLTRWAYACLPPP**PWHLGPSWPGPCPTTPL
A*LQTGTSPCLPTGGPGE*PGEQRLPGIWPHPLR
VGATAHHPAGGLLPGAPAPTGPEHQPHPQWAGL
CLSVLLL*PGWAL*R*GLLLGAQPG*EHQYVGQ
SRLWELVWCHRA*AGLVWGQPDEDHSSALLPGAR
TRRPPPQSLLHPTDVIPLPPPQNTQAPVPLTLG
PCAKFVCRFLPRILGVVATPSSGRLLAAPVIVS
LCRPPRMGGMALAARCPQHPGMTCHLCFHTGASY
LSCACHSINSVCAPQL

Frame 2

FINIW**ARPPGHRGGSGPGDATVKPGSRLSAG
AWGKARSLRAGPRSHFRRLWAENPKLPMGPSLP
WLHTHRKGIWVSPPSKGDSTDPLFA*A*GKYFR
PYSRWLPRAVGTGGVSGCGAKVTGRGRSFPCPSS
DPTRTGRLASSWSFAASALLCPRSSGEEVPSGG
GRKGLHELDYHGSSSQALHFREPSSK*DRGGDN
EGHNSQEAPRRAVRDAREDAWAPRNGNWLDPRNS
VPETGREDA*GPKWKGQSWRPSTQKMRPQFENQ
RAGSDGLPP*HGE*PVWPGACCRAGACAATCCD
PGADSCLHHPVCPALLLRLCPALAGASVWAQASQ
LSDGVPGPLSALGRLAYHPLLLLLPRYSPRQPP
GALALLASLLLPRLPAVLHLDAYEPLLCPGGVQ
GQGEASAGDEPRLARCPRGLCGGLAALSAGERAV
CCALPSAPGTALGPAACPRPGERLPVRHLRAVS
CCLPLPRRQAGALH*HLPGGQGDQCVPGGRDGW
RHGPALCQPGLLQPDSTGLGPPEPAGHLRLRLVQ
CV*PGGHTHVCHLLSSRGTLAPAGLGPVPLPLW
RDCRLAPAPAFPQADLVNDLGNKGYLVFGLILF
VWELLPTTLLVGFFRVHRPPQDLSTSHILNGQVF
ASRSYFFDRAGHCEDEGCSWEHSRGESTSMSGS
LGSGSWYGAIGREPGWYGGSQTKTTPLLFSQVP
GPGGHHHSLYSTPQT*SPSLPHRIPRPQSPSP*A
PVPSLSAASCPGSWGSWLPPPLAGSLLLLS**A
CAVPLGWGAWPWLPDAHSTLA*PATSASTPEPA
TSPVPATQ*TVSAPHSC

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