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Sequences

Sequence FANCA.bAug05

TCACGAGATACTTTGTGCAGCTGCTTATCTCCAGGCCTTATTAAAAAGTTTCAGTTCCTCATGTTCAGATTGTTCTCAGAGGCCCGACAGCCTCTTTCTG
AGGAGGACGTAGCCAGCCTTTCCTGGAGACCCTTGCACCTTCCTTCTGCAGACTGGCAGAGAGCTGCCCTCTCTCTCTGGACACACAGAACCTTCCGAGA
GGTGTTGAAAGAGGAAGATGTTCACTTAACTTACCAAGACTGGTTACACCTGGAGCTGGAAATTCAACCTGAAGCTGATGCTCTTTCAGATACTGAACGC
TCAAGGAGTTATGACCACTCAGAAAATTCTGATTTGGTCTTTGGTGGCCGCACAGGAAATGAGGATATTATTTCCAGATTGCAGGAGATGGTAGCTGACC
TGGAGCTGCAGCAAGACCTCATAGTGCCTCTCGGCCACACCCCTTCCCAGGAGCACTTCCTCTTTGAGATTTTCCGCAGACGGCTCCAGGCTCTGACAAG
CGGGTGGAGCGTGGCTGCCAGCCTTCAGAGACAGAGGGAGCTGCTAATGTACAAACGGATCCTCCTCCGCCTGCCTTCGTCTGTCCTCTGCGGCAGCAGC
TTCCAGGCAGAACAGCCCATCACTGCCAGATGCGAGCAGTTCTTCCACTTGGTCAACTCTGAGATGAGAAACTTCTGCTCCCACGGAGGTGCCCTGACAC
AGGACATCACTGCCCACTTCTTCAGGGGCCTCCTGAACGCCTGTCTGCGGAGCAGAGACCCCTCCCTGATGGTCGACTTCATACTGGCCAAGTGCCAGAC
GAAATGCCCCTTAATTTTGACCTCTGCTCTGGTGTGGTGGCCGAGCCTGGAGCCTGTGCTGCTCTGCCGGTGGAGGAGACACTGCCAGAGCCCGCTGCCC
CGGGAACTGCAGAAGCTACAAGAAGGCCGGCAGTTTGCCAGCGATTTCCTCTCCCCTGAGGCTGCCTCCCCAGCACCCAACCCGGACTGGCTCTCAGCTG
CTGCACTGCACTTTGCGATTCAACAAGTCAGGGAAGAAAACATCAGGAAGCAGCTAAAGAAGCTGGACTGCGAGAGAGAGGAGCTATTGGTTTTCCTTTT
CTTCTTCTCCTTGATGGGCCTGCTGTCGTCACATCTGACCTCAAATAGCACCACAGACCTGCCAAAGGCTTTCCACGTTTGTGCAGCAATCCTCGAGTGT
TTAGAGAAGAGGAAGATATCCTGGCTGGCACTCTTTCAGTTGACAGAGAGTGACCTCAGGCTGGGGCGGCTCCTCCTCCGTGTGGCCCCGGATCAGCACA
CCAGGCTGCTGCCTTTCGCTTTTTACAGTCTTCTCTCCTACTTCCATGAAGACGCGGCCATCAGGGAAGAGGCCTTCCTGCATGTTGCTGTGGACATGTA
CTTGAAGCTGGTCCAGCTCTTCGTGGCTGGGGATACAAGCACAGTTTCACCTCCAGCTGGCAGGAGCCTGGAGCTCAAGGGTCAGGCAGGGCAACCCCGT
GGAACTGATAACAAAAGCTCGTCTTTTTCTGCTGCAGTTAATACCTCGGTGCCCGAAAAAGAGCTTCTCACACGTGGCAGAGCTGCTGGCTGATCGTGGG
GACTGCGACCCAGAGGTGAGCGCCGCCCTCCAGAGCAGACAGCAGGCTGCCCCTGACGCTGACCTGTCCCAGGAGCCTCATCTCTTCTGACGGGACCTGC
CACTGCACACCAGCCCAGCTCCCGTGTAAATAATTTATTACAAGCATAACATGGAGCTCTTGTTGCACTAAAAAGTGGATTACAAATCTCCTCGACTGCT
TTAGTGGGGAAAGGAATCAATTATTTATGAACTGTCCGGCCCCGAGTCACTCAGCGTTTGCGGGAAAATAAACCACTGGTCCCAGAGCAGAGGAAGGCTA
CTTGAGCCGGACACCAAGCCCGCCTCCAGCACCAAGGGCGGGCAGCACCCTCCGACCCTCCCATGCGGGTGCACACGAAGGGTGAGGCTGACACAGCCAC
TGCGGAGTCCAGGCTGCTAGAGGTGCTCATCCTCACTGCCGTCCTCAGGTGGGTTCGGGCTTCACCGCCTGGCCCTCTGTGGTCACAGAGGGGCTCGGTG
GCCCAGGTGGTGGTTCCGCCTCCAGGGGCAGGGCCTTGTCCTGGGTCTGTGTCAGCGGGTGCACCATGGACATGTGTACATTGAGGTTGTGGGCCTTCTC
AAACCGCCGGCCACACTGGTCACAGGCAAAGTCCAGCTCAGTCTCAGCCTTGTGTTTGGTCATGTGGTACTTGAGGGATGCCCGCTGCCTGCACTGGAAC
CCACAGACCTCACACCTGGGGGACAGAGGCAGATAAGAAGGTGCGAGGGCCACAGCCCTGGGAGGGGGTCCTGACTCACACTTACTGCAAAGGCTTGGCT
CCCGAATGTCGCATTTGGTGGACGAGAAGGTGCTTCCGCTGCTTGAAGGTTTGTCCACATTCGTCACAGATATAGTTCCGCACCTCTGAGAGGGGAGAGT
CCAGTGAGTCCAGGCCCCTGATGCTCCAACCTCCCGGGGGGACGACGATGACAATGTGAAACCATCACAGCTGGGAAGACATTTCTGCACATGGTTCACC
ATGCAGTGGGCCCAAGCAAGGGGCCTATGAGGGCCTCGTTTATTAAGATCTTTAAACTGCTTTATACACTGTCACGTGGCTTCATCAGCTGTGTGCATTT
CAGGATGGTTTTTAAAGAAACCTCAGAAAGCTATTTCCTT
  • FANCA.F13 (forward primer)
  • FANCA.R12 (reverse primer)
  • Mutually exclusive exon skipping

Frame 0

SRDTLCSCLSPGLIKKFQFLMFRLFSEARQPLS
EEDVASLSWRPLHLPSADWQRAALSLWTHRTFRE
VLKEEDVHLTYQDWLHLELEIQPEADALSDTER
SRSYDHSENSDLVFGGRTGNEDIISRLQEMVAD
LELQQDLIVPLGHTPSQEHFLFEIFRRRLQALTS
GWSVAASLQRQRELLMYKRILLRLPSSVLCGSS
FQAEQPITARCEQFFHLVNSEMRNFCSHGGALT
QDITAHFFRGLLNACLRSRDPSLMVDFILAKCQT
KCPLILTSALVWWPSLEPVLLCRWRRHCQSPLP
RELQKLQEGRQFASDFLSPEAASPAPNPDWLSA
AALHFAIQQVREENIRKQLKKLDCEREELLVFLF
FFSLMGLLSSHLTSNSTTDLPKAFHVCAAILEC
LEKRKISWLALFQLTESDLRLGRLLLRVAPDQH
TRLLPFAFYSLLSYFHEDAAIREEAFLHVAVDMY
LKLVQLFVAGDTSTVSPPAGRSLELKGQAGQPR
GTDNKSSSFSAAVNTSVPEKELLTRGRAAG*SW
GLRPRGERRPPEQTAGCP*R*PVPGASSLLTGPA
TAHQPSSRVNNLLQA*HGALVALKSGLQISSTA
LVGKGINYL*TVRPRVTQRLRENKPLVPEQRKA
T*AGHQARLQHQGRAAPSDPPMRVHTKGEADTAT
AESRLLEVLILTAVLRWVRASPPGPLWSQRGSV
AQVVVPPPGAGPCPGSVSAGAPWTCVH*GCGPS
QTAGHTGHRQSPAQSQPCVWSCGT*GMPAACTGT
HRPHTWGTEADKKVRGPQPWEGVLTHTYCKGLA
PECRIWWTRRCFRCLKVCPHSSQI*FRTSERGE
SSESRPLMLQPPGGTTMTM*NHHSWEDISAHGSP
CSGPKQGAYEGLVY*DL*TALYTVTWLHQLCAF
QDGF*RNLRKLFP

Frame 1

HEILCAAAYLQALLKSFSSSCSDCSQRPDSLFL
RRT*PAFPGDPCTFLLQTGRELPSLSGHTEPSE
RC*KRKMFT*LTKTGYTWSWKFNLKLMLFQILNA
QGVMTTQKILIWSLVAAQEMRILFPDCRRW*LT
WSCSKTS*CLSATPLPRSTSSLRFSADGSRL*Q
AGGAWLPAFRDRGSC*CTNGSSSACLRLSSAAAA
SRQNSPSLPDASSSSTWSTLR*ETSAPTEVP*H
RTSLPTSSGAS*TPVCGAETPP*WSTSYWPSAR
RNAP*F*PLLWCGGRAWSLCCSAGGGDTARARCP
GNCRSYKKAGSLPAISSPLRLPPQHPTRTGSQL
LHCTLRFNKSGKKTSGSS*RSWTARERSYWFSF
SSSP*WACCRHI*PQIAPQTCQRLSTFVQQSSSV
*RRGRYPGWHSFS*QRVTSGWGGSSSVWPRIST
PGCCLSLFTVFSPTSMKTRPSGKRPSCMLLWTC
T*SWSSSSWLGIQAQFHLQLAGAWSSRVRQGNPV
ELITKARLFLLQLIPRCPKKSFSHVAELLADRG
DCDPEVSAALQSRQQAAPDADLSQEPHLF*RDL
PLHTSPAPV*IIYYKHNMELLLH*KVDYKSPRLL
*WGKESIIYELSGPESLSVCGKINHWSQSRGRL
LEPDTKPASSTKGGQHPPTLPCGCTRRVRLTQP
LRSPGC*RCSSSLPSSGGFGLHRLALCGHRGARW
PRWWFRLQGQGLVLGLCQRVHHGHVYIEVVGLL
KPPATLVTGKVQLSLSLVFGHVVLEGCPLPALE
PTDLTPGGQRQIRRCEGHSPGRGS*LTLTAKAWL
PNVAFGGREGASAA*RFVHIRHRYSSAPLRGES
PVSPGP*CSNLPGGRR*QCETITAGKTFLHMVH
HAVGPSKGPMRASFIKIFKLLYTLSRGFISCVHF
RMVFKETSESYFL

Frame 2

TRYFVQLLISRPY*KVSVPHVQIVLRGPTASF*
GGRSQPFLETLAPSFCRLAESCPLSLDTQNLPR
GVERGRCSLNLPRLVTPGAGNST*S*CSFRY*T
LKEL*PLRKF*FGLWWPHRK*GYYFQIAGDGS*P
GAAARPHSASRPHPFPGALPL*DFPQTAPGSDK
RVERGCQPSETEGAANVQTDPPPPAFVCPLRQQ
LPGRTAHHCQMRAVLPLGQL*DEKLLLPRRCPDT
GHHCPLLQGPPERLSAEQRPLPDGRLHTGQVPD
EMPLNFDLCSGVVAEPGACAALPVEETLPEPAA
PGTAEATRRPAVCQRFPLP*GCLPSTQPGLALSC
CTALCDSTSQGRKHQEAAKEAGLRERGAIGFPF
LLLLDGPAVVTSDLK*HHRPAKGFPRLCSNPRV
FREEEDILAGTLSVDRE*PQAGAAPPPCGPGSAH
QAAAFRFLQSSLLLP*RRGHQGRGLPACCCGHV
LEAGPALRGWGYKHSFTSSWQEPGAQGSGRATP
WN**QKLVFFCCS*YLGARKRASHTWQSCWLIVG
TATQR*APPSRADSRLPLTLTCPRSLISSDGTC
HCTPAQLPCK*FITSITWSSCCTKKWITNLLDC
FSGERNQLFMNCPAPSHSAFAGK*TTGPRAEEGY
LSRTPSPPPAPRAGSTLRPSHAGAHEG*G*HSH
CGVQAARGAHPHCRPQVGSGFTAWPSVVTEGLG
GPGGGSASRGRALSWVCVSGCTMDMCTLRLWAFS
NRRPHWSQAKSSSVSALCLVMWYLRDARCLHWN
PQTSHLGDRGR*EGARATALGGGPDSHLLQRLG
SRMSHLVDEKVLPLLEGLSTFVTDIVPHL*EGRV
Q*VQAPDAPTSRGDDDDNVKPSQLGRHFCTWFT
MQWAQARGL*GPRLLRSLNCFIHCHVASSAVCI
SGWFLKKPQKAIS

Sequence FANCA.eAug05

GAGGACCATGTGTGGACGTGTGCTCCCTGCAGTGCTCACCCGGCTCTGCCAGCTGCTCCGTCACCAGGTGAGGCTCTCCTTCATGGGGGCCACCCTTGGG
GGCCCACTCTGAGGGCCAGGCTGCTACTTCTCAATTCGTCTTCAGTGCCCTGGAAAATTCCAGCTTGGAAGAGGGCAGTCTGCTCTGCCACCCTCATTCT
CGTTGCAGGGCCCGAGCCTGAGTGCCCCACATGTGCTGGGGTTGGCTGCCCTGGCCGTGCACCTGGGTGAGTCCAGGTCTGCGCTCCCAGAGGTGGATGT
GGGTCCTCCTGCACCTGGTGCTGGCCTTCCTGTCCCTGCGCTCTTTGACAGCCTCCTGACCTGTAGGACGAGGGATTCCTTGTTCTTCTGCCTGAAATTT
TGTACAGCAGCAATTTCTTACTCTCTCTGCAAGTTTTCTTCCCAGTCACGAGATACTTTGTGCAGCTGCTTATCTCCAGGCCTTATTAAAAAGTTTCAGT
TCCTCATGTTCAGATTGTTCTCAGAGGCCCGACAGCCTCTTTCTGAGGAGGACGTAGCCAGCCTTTCCTGGAGACCCTTGCACCTTCCTTCTGCAGACTG
GCAGAGAGCTGCCCTCTCTCTCTGGACACACAGAACCTTCCGAGAGGTGTTGAAAGAGGAAGATGTTCACTTAACTTACCAAGACTGGTTACACCTGGAG
CTGGAAATTCAACCTGAAGCTGATGCTCTTTCAGATACTGAACGGCAGGACTTCCACCAGTGGGCGATCCATGAGCACTTTCTCCCTGAGTCCTCGGCTT
CAGGGGGCTGTGACGGAGACCTGCAGGCTGCGTGTACCATTCTTGTCAACGCACTGATGGATTTCCACCAAAGGAGATGGTAGCTGACCTGGAGCTGCAG
CAAGACCTCATAGTGCCTCTCGGCCACACCCCTTCCCAGGAGCACTTCCTCTTTGAGATTTTCCGCAGACGGCTCCAGGCTCTGACAAGCGGGTGGAGCG
TGGCTGCCAGCCTTCAGAGACAGAGGGAGCTGCTAATGTACAAACGGATCCTCCTCCGCCTGCCTTCGTCTGTCCTCTGCGGCAGCAGCTTCCAGGCAGA
ACAGCCCATCACTGCCAGATGCGAGCAGTTCTTCCACTTGGTCAACTCTGAGATGAGAAACTTCTGCTCCCACGGAGGTGCCCTGACACAGGACATCACT
GCCCACTTCTTCAGGGGCCTCCTGAACGCCTGTCTGCGGAGCAGAGACCCCTCCCTGATGGTCGACTTCATACTGGCCAAGTGCCAGACGAAATGCCCCT
TAATTTTGACCTCTGCTCTGGTGTGGTGGCCGAGCCTGGAGCCTGTGCTGCTCTGCCGGTGGAGGAGACACTGCCAGAGCCCGCTGCCCCGGGAACTGCA
GAAGCTACAAGAAGGCCGGCAGTTTGCCAGCGAGTACGTGTGGGTGGTGAGATGGGGTGTGCCCGCCCAGATGCACTTCGGGACCTGCTCAAGGTCATCT
CCTAAACACCCTGGCTTGCTTGAGAGAAGCGGTGTGGGCAGCCTCTCGTGTGAGCAGGGAGAAAAGAACCGAGTTCTCGTGGTGGTGGGCGCCTGTAATC
CCAACTACTGGGGAGGCCGAGGCAGGAGAATCAGTTGAACCCAGGAGGTGGAGTTTCCAGTGAGCCGAGATCACTCCAACGGCCAATAGAGCAAGACTCT
GTCCA
  • FANCA.F13 (forward primer)
  • FANCA.R12 (reverse primer)
  • Mutually exclusive exon skipping

Frame 0

EDHVWTCAPCSAHPALPAAPSPGEALLHGGHPW
GPTLRARLLLLNSSSVPWKIPAWKRAVCSATLIL
VAGPEPECPTCAGVGCPGRAPG*VQVCAPRGGC
GSSCTWCWPSCPCAL*QPPDL*DEGFLVLLPEI
LYSSNFLLSLQVFFPVTRYFVQLLISRPY*KVSV
PHVQIVLRGPTASF*GGRSQPFLETLAPSFCRL
AESCPLSLDTQNLPRGVERGRCSLNLPRLVTPG
AGNST*S*CSFRY*TAGLPPVGDP*ALSP*VLGF
RGL*RRPAGCVYHSCQRTDGFPPKEMVADLELQ
QDLIVPLGHTPSQEHFLFEIFRRRLQALTSGWS
VAASLQRQRELLMYKRILLRLPSSVLCGSSFQAE
QPITARCEQFFHLVNSEMRNFCSHGGALTQDIT
AHFFRGLLNACLRSRDPSLMVDFILAKCQTKCP
LILTSALVWWPSLEPVLLCRWRRHCQSPLPRELQ
KLQEGRQFASEYVWVVRWGVPAQMHFGTCSRSS
PKHPGLLERSGVGSLSCEQGEKNRVLVVVGACN
PNYWGGRGRRIS*TQEVEFPVSRDHSNGQ*SKTL
S

Frame 1

RTMCGRVLPAVLTRLCQLLRHQVRLSFMGATLG
GPL*GPGCYFSIRLQCPGKFQLGRGQSALPPSF
SLQGPSLSAPHVLGLAALAVHLGESRSALPEVDV
GPPAPGAGLPVPALFDSLLTCRTRDSLFFCLKF
CTAAISYSLCKFSSQSRDTLCSCLSPGLIKKFQ
FLMFRLFSEARQPLSEEDVASLSWRPLHLPSADW
QRAALSLWTHRTFREVLKEEDVHLTYQDWLHLE
LEIQPEADALSDTERQDFHQWAIHEHFLPESSA
SGGCDGDLQAACTILVNALMDFHQRRW*LTWSCS
KTS*CLSATPLPRSTSSLRFSADGSRL*QAGGA
WLPAFRDRGSC*CTNGSSSACLRLSSAAAASRQ
NSPSLPDASSSSTWSTLR*ETSAPTEVP*HRTSL
PTSSGAS*TPVCGAETPP*WSTSYWPSARRNAP
*F*PLLWCGGRAWSLCCSAGGGDTARARCPGNC
RSYKKAGSLPASTCGW*DGVCPPRCTSGPAQGHL
LNTLACLREAVWAASRVSREKRTEFSWWWAPVI
PTTGEAEAGESVEPRRWSFQ*AEITPTANRARL
CP

Frame 2

GPCVDVCSLQCSPGSASCSVTR*GSPSWGPPLG
AHSEGQAATSQFVFSALENSSLEEGSLLCHPHS
RCRARA*VPHMCWGWLPWPCTWVSPGLRSQRWM
WVLLHLVLAFLSLRSLTAS*PVGRGIPCSSA*NF
VQQQFLTLSASFLPSHEILCAAAYLQALLKSFS
SSCSDCSQRPDSLFLRRT*PAFPGDPCTFLLQT
GRELPSLSGHTEPSERC*KRKMFT*LTKTGYTWS
WKFNLKLMLFQILNGRTSTSGRSMSTFSLSPRL
QGAVTETCRLRVPFLSTH*WISTKGDGS*PGAA
ARPHSASRPHPFPGALPL*DFPQTAPGSDKRVER
GCQPSETEGAANVQTDPPPPAFVCPLRQQLPGR
TAHHCQMRAVLPLGQL*DEKLLLPRRCPDTGHH
CPLLQGPPERLSAEQRPLPDGRLHTGQVPDEMPL
NFDLCSGVVAEPGACAALPVEETLPEPAAPGTA
EATRRPAVCQRVRVGGEMGCARPDALRDLLKVI
S*TPWLA*EKRCGQPLV*AGRKEPSSRGGGRL*S
QLLGRPRQENQLNPGGGVSSEPRSLQRPIEQDS
V

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