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Sequences

Sequence NM_201224

ACTTCCGGAGACCTCACACAAGATGGCGGCACCCGAGGAACACGATTCTCCGACCGAAGCGTCCCAGCCGATTGTGGAAGAGGAGGAAACTAAAACATTT
AAAGACCTGGGTGTGACAGATGTGTTGTGTGAAGCTTGTGACCAGTTGGGATGGACAAAACCCACCAAGATCCAGATTGAAGCTATTCCTTTGGCCTTAC
AAGGTCGTGATATCATTGGGCTTGCAGAAACTGGCTCTGGAAAGACAGGCGCCTTTGCTTTGCCCATTCTAAACGCACTGCTGGAGACCCCGCAGCGTTT
GTTTGCCCTAGTTCTTACCCCGACTCGGGAGCTGGCCTTTCAGATCTCAGAGCAGTTTGAAGCCCTGGGGTCCTCTATTGGAGTGCAGAGTGCTGTGATT
GTAGGTGGAATTGATTCAATGTCTCAATCTTTGGCCCTTGCAAAAAAACCACATATAATAATAGCAACTCCTGGTCGACTGATTGACCACTTGGAAAATA
CGAAAGGTTTCAACTTGAGAGCTCTCAAATACTTGGTCATGGATGAAGCCGACCGAATACTGAATATGGATTTTGAGACAGAGGTTGACAAGATCCTCAA
AGTGATTCCTCGAGATCGGAAAACATTCCTCTTCTCTGCCACCATGACCAAGAAGGTTCAAAAACTTCAGCGAGCAGCTCTGAAGAATCCTGTGAAATGT
GCCGTTTCCTCTAAATACCAGACAGTTGAAAAATTACAGCAATATTATATTTTTATTCCCTCTAAATTCAAGAGTAAGCGCCTAGGATCCCTTAATAAGT
TTAAGGCCAAGGCCCGTTCCATTCTTCTAGCAACTGACGTTGCCAGCCGAGGTTTGGACATACCTCATGTAGATGTGGTTGTCAACTTTGACATTCCTAC
CCATTCCAAGGATTACATCCATCGAGTAGGTCGAACAGCTAGAGCTGGGCGCTCCGGAAAGGCTATTACTTTTGTCACACAGTATGATGTGGAACTCTTC
CAGCGCATAGAACACTTAATTGGGAAGAAACTACCAGGTTTTCCAACACAGGATGATGAGGTTATGATGCTGACAGAACGCGTCGCTGAAGCCCAAAGGT
TTGCCCGAATGGAGTTAAGGGAGCATGGAGAAAAGAAGAAACGCTCGCGAGAGGATGCTGGAGATAATGATGACACAGAGGGTGCTATTGGTGTCAGGAA
CAAGGTGGCTGGAGGAAAAATGAAGAAGCGGAAAGGCCGTTAATCACTTTTATGAAGGCTCGAGTTCTGCTGTTCTGTAAAAGAGAATTGGAGAATGAAA
CCTGCTCCAACAGAGATCATGAGACTGAAATTGGTCAGAATTGTGTCCAGAATGTGCTCAGCTAATTCAGTATTCTTCCCCATTCTGGGTTGGAGTTTAC
TGCAGAGTAATTCTTACAGTGCTGATGTCAAGACTGTTACTGTTCTTCGACTTTGATTCCTTGCTCATGACATGAGTAGGGTGTGCTCTTCTGTCACTTC
ACACAGACCTTTTGCCTTTTTTAGCTGCAAGTCAAGGACTAGGTTGATGATGCCCATGACCTGTAATTGTAAAGAAGCTTGGACATCTGCAAATGATATT
TAAACCATCTTGGCTTGTGCTTTATTCAAACTAATGTGAAACAATAAATTTAAATATTATTTTTAAAAGA
  • refseq_DDX47.F2 (forward primer)
  • refseq_DDX47.R2 (reverse primer)
  • Single exon skipping

Frame 0

TSGDLTQDGGTRGTRFSDRSVPADCGRGGN*NI
*RPGCDRCVV*SL*PVGMDKTHQDPD*SYSFGLT
RS*YHWACRNWLWKDRRLCFAHSKRTAGDPAAF
VCPSSYPDSGAGLSDLRAV*SPGVLYWSAECCD
CRWN*FNVSIFGPCKKTTYNNSNSWSTD*PLGKY
ERFQLESSQILGHG*SRPNTEYGF*DRG*QDPQ
SDSSRSENIPLLCHHDQEGSKTSASSSEESCEM
CRFL*IPDS*KITAILYFYSL*IQE*APRIP**V
*GQGPFHSSSN*RCQPRFGHTSCRCGCQL*HSY
PFQGLHPSSRSNS*SWALRKGYYFCHTV*CGTL
PAHRTLNWEETTRFSNTG**GYDADRTRR*SPKV
CPNGVKGAWRKEETLARGCWR***HRGCYWCQE
QGGWRKNEEAERPLITFMKARVLLFCKRELENE
TCSNRDHETEIGQNCVQNVLS*FSILPHSGLEFT
AE*FLQC*CQDCYCSSTLIPCS*HE*GVLFCHF
TQTFCLF*LQVKD*VDDAHDL*L*RSLDICK*Y
LNHLGLCFIQTNVKQ*I*ILFLK

Frame 1

LPETSHKMAAPEEHDSPTEASQPIVEEEETKTF
KDLGVTDVLCEACDQLGWTKPTKIQIEAIPLAL
QGRDIIGLAETGSGKTGAFALPILNALLETPQRL
FALVLTPTRELAFQISEQFEALGSSIGVQSAVI
VGGIDSMSQSLALAKKPHIIIATPGRLIDHLEN
TKGFNLRALKYLVMDEADRILNMDFETEVDKILK
VIPRDRKTFLFSATMTKKVQKLQRAALKNPVKC
AVSSKYQTVEKLQQYYIFIPSKFKSKRLGSLNK
FKAKARSILLATDVASRGLDIPHVDVVVNFDIPT
HSKDYIHRVGRTARAGRSGKAITFVTQYDVELF
QRIEHLIGKKLPGFPTQDDEVMMLTERVAEAQR
FARMELREHGEKKKRSREDAGDNDDTEGAIGVRN
KVAGGKMKKRKGR*SLL*RLEFCCSVKENWRMK
PAPTEIMRLKLVRIVSRMCSANSVFFPILGWSL
LQSNSYSADVKTVTVLRL*FLAHDMSRVCSSVTS
HRPFAFFSCKSRTRLMMPMTCNCKEAWTSANDI
*TILACALFKLM*NNKFKYYF*K

Frame 2

FRRPHTRWRHPRNTILRPKRPSRLWKRRKLKHL
KTWV*QMCCVKLVTSWDGQNPPRSRLKLFLWPY
KVVISLGLQKLALERQAPLLCPF*THCWRPRSV
CLP*FLPRLGSWPFRSQSSLKPWGPLLECRVL*L
*VELIQCLNLWPLQKNHI***QLLVD*LTTWKI
RKVST*ELSNTWSWMKPTEY*IWILRQRLTRSS
K*FLEIGKHSSSLPP*PRRFKNFSEQL*RIL*NV
PFPLNTRQLKNYSNIIFLFPLNSRVSA*DPLIS
LRPRPVPFF*QLTLPAEVWTYLM*MWLSTLTFL
PIPRITSIE*VEQLELGAPERLLLLSHSMMWNSS
SA*NT*LGRNYQVFQHRMMRL*C*QNASLKPKG
LPEWS*GSMEKRRNARERMLEIMMTQRVLLVSG
TRWLEEK*RSGKAVNHFYEGSSSAVL*KRIGE*N
LLQQRS*D*NWSELCPECAQLIQYSSPFWVGVY
CRVILTVLMSRLLLFFDFDSLLMT*VGCALLSL
HTDLLPFLAASQGLG**CP*PVIVKKLGHLQMIF
KPSWLVLYSN*CETINLNIIFKR

Sequence NM_016355

ACTTCCGGAGACCTCACACAAGATGGCGGCACCCGAGGAACACGATTCTCCGACCGAAGCGTCCCAGCCGATTGTGGAAGAGGAGGAAACTAAAACATTT
AAAGACCTGGGTGTGACAGATGTGTTGTGTGAAGCTTGTGACCAGTTGGGATGGACAAAACCCACCAAGATCCAGATTGAAGCTATTCCTTTGGCCTTAC
AAGGTCGTGATATCATTGGGCTTGCAGAAACTGGCTCTGGAAAGACAGGCGCCTTTGCTTTGCCCATTCTAAACGCACTGCTGGAGACCCCGCAGCGTTT
GTTTGCCCTAGTTCTTACCCCGACTCGGGAGCTGGCCTTTCAGATCTCAGAGCAGTTTGAAGCCCTGGGGTCCTCTATTGGAGTGCAGAGTGCTGTGATT
GTAGGTGGAATTGATTCAATGTCTCAATCTTTGGCCCTTGCAAAAAAACCACATATAATAATAGCAACTCCTGGTCGACTGATTGACCACTTGGAAAATA
CGAAAGGTTTCAACTTGAGAGCTCTCAAATACTTGGTCATGGATGAAGCCGACCGAATACTGAATATGGATTTTGAGACAGAGGTTGACAAGATCCTCAA
AGTGATTCCTCGAGATCGGAAAACATTCCTCTTCTCTGCCACCATGACCAAGAAGGTTCAAAAACTTCAGCGAGCAGCTCTGAAGAATCCTGTGAAATGT
GCCGTTTCCTCTAAATACCAGACAGTTGAAAAATTACAGCAATATTATATTTTTATTCCCTCTAAATTCAAGGATACCTACCTGGTTTATATTCTAAATG
AATTGGCTGGAAACTCCTTTATGATATTCTGCAGCACCTGTAATAATACCCAGAGAACAGCTTTGCTACTGCGAAATCTTGGCTTCACTGCCATCCCCCT
CCATGGACAAATGAGTCAGAGTAAGCGCCTAGGATCCCTTAATAAGTTTAAGGCCAAGGCCCGTTCCATTCTTCTAGCAACTGACGTTGCCAGCCGAGGT
TTGGACATACCTCATGTAGATGTGGTTGTCAACTTTGACATTCCTACCCATTCCAAGGATTACATCCATCGAGTAGGTCGAACAGCTAGAGCTGGGCGCT
CCGGAAAGGCTATTACTTTTGTCACACAGTATGATGTGGAACTCTTCCAGCGCATAGAACACTTAATTGGGAAGAAACTACCAGGTTTTCCAACACAGGA
TGATGAGGTTATGATGCTGACAGAACGCGTCGCTGAAGCCCAAAGGTTTGCCCGAATGGAGTTAAGGGAGCATGGAGAAAAGAAGAAACGCTCGCGAGAG
GATGCTGGAGATAATGATGACACAGAGGGTGCTATTGGTGTCAGGAACAAGGTGGCTGGAGGAAAAATGAAGAAGCGGAAAGGCCGTTAATCACTTTTAT
GAAGGCTCGAGTTCTGCTGTTCTGTAAAAGAGAATTGGAGAATGAAACCTGCTCCAACAGAGATCATGAGACTGAAATTGGTCAGAATTGTGTCCAGAAT
GTGCTCAGCTAATTCAGTATTCTTCCCCATTCTGGGTTGGAGTTTACTGCAGAGTAATTCTTACAGTGCTGATGTCAAGACTGTTACTGTTCTTCGACTT
TGATTCCTTGCTCATGACATGAGTAGGGTGTGCTCTTCTGTCACTTCACACAGACCTTTTGCCTTTTTTAGCTGCAAGTCAAGGACTAGGTTGATGATGC
CCATGACCTGTAATTGTAAAGAAGCTTGGACATCTGCAAATGATATTTAAACCATCTTGGCTTGTGCTTTATTCAAACTAATGTGAAACAATAAATTTAA
ATATTATTTTTAAAAGA
  • refseq_DDX47.F2 (forward primer)
  • refseq_DDX47.R2 (reverse primer)
  • Single exon skipping

Frame 0

TSGDLTQDGGTRGTRFSDRSVPADCGRGGN*NI
*RPGCDRCVV*SL*PVGMDKTHQDPD*SYSFGLT
RS*YHWACRNWLWKDRRLCFAHSKRTAGDPAAF
VCPSSYPDSGAGLSDLRAV*SPGVLYWSAECCD
CRWN*FNVSIFGPCKKTTYNNSNSWSTD*PLGKY
ERFQLESSQILGHG*SRPNTEYGF*DRG*QDPQ
SDSSRSENIPLLCHHDQEGSKTSASSSEESCEM
CRFL*IPDS*KITAILYFYSL*IQGYLPGLYSK*
IGWKLLYDILQHL**YPENSFATAKSWLHCHPP
PWTNESE*APRIP**V*GQGPFHSSSN*RCQPR
FGHTSCRCGCQL*HSYPFQGLHPSSRSNS*SWAL
RKGYYFCHTV*CGTLPAHRTLNWEETTRFSNTG
**GYDADRTRR*SPKVCPNGVKGAWRKEETLAR
GCWR***HRGCYWCQEQGGWRKNEEAERPLITFM
KARVLLFCKRELENETCSNRDHETEIGQNCVQN
VLS*FSILPHSGLEFTAE*FLQC*CQDCYCSST
LIPCS*HE*GVLFCHFTQTFCLF*LQVKD*VDDA
HDL*L*RSLDICK*YLNHLGLCFIQTNVKQ*I*
ILFLK

Frame 1

LPETSHKMAAPEEHDSPTEASQPIVEEEETKTF
KDLGVTDVLCEACDQLGWTKPTKIQIEAIPLAL
QGRDIIGLAETGSGKTGAFALPILNALLETPQRL
FALVLTPTRELAFQISEQFEALGSSIGVQSAVI
VGGIDSMSQSLALAKKPHIIIATPGRLIDHLEN
TKGFNLRALKYLVMDEADRILNMDFETEVDKILK
VIPRDRKTFLFSATMTKKVQKLQRAALKNPVKC
AVSSKYQTVEKLQQYYIFIPSKFKDTYLVYILN
ELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL
HGQMSQSKRLGSLNKFKAKARSILLATDVASRG
LDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGR
SGKAITFVTQYDVELFQRIEHLIGKKLPGFPTQD
DEVMMLTERVAEAQRFARMELREHGEKKKRSRE
DAGDNDDTEGAIGVRNKVAGGKMKKRKGR*SLL
*RLEFCCSVKENWRMKPAPTEIMRLKLVRIVSRM
CSANSVFFPILGWSLLQSNSYSADVKTVTVLRL
*FLAHDMSRVCSSVTSHRPFAFFSCKSRTRLMM
PMTCNCKEAWTSANDI*TILACALFKLM*NNKFK
YYF*K

Frame 2

FRRPHTRWRHPRNTILRPKRPSRLWKRRKLKHL
KTWV*QMCCVKLVTSWDGQNPPRSRLKLFLWPY
KVVISLGLQKLALERQAPLLCPF*THCWRPRSV
CLP*FLPRLGSWPFRSQSSLKPWGPLLECRVL*L
*VELIQCLNLWPLQKNHI***QLLVD*LTTWKI
RKVST*ELSNTWSWMKPTEY*IWILRQRLTRSS
K*FLEIGKHSSSLPP*PRRFKNFSEQL*RIL*NV
PFPLNTRQLKNYSNIIFLFPLNSRIPTWFIF*M
NWLETPL*YSAAPVIIPREQLCYCEILASLPSP
SMDK*VRVSA*DPLISLRPRPVPFF*QLTLPAEV
WTYLM*MWLSTLTFLPIPRITSIE*VEQLELGA
PERLLLLSHSMMWNSSSA*NT*LGRNYQVFQHR
MMRL*C*QNASLKPKGLPEWS*GSMEKRRNARER
MLEIMMTQRVLLVSGTRWLEEK*RSGKAVNHFY
EGSSSAVL*KRIGE*NLLQQRS*D*NWSELCPE
CAQLIQYSSPFWVGVYCRVILTVLMSRLLLFFDF
DSLLMT*VGCALLSLHTDLLPFLAASQGLG**C
P*PVIVKKLGHLQMIFKPSWLVLYSN*CETINL
NIIFKR

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