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Sequences

Sequence NM_199487

AAAAGGAGGACGTAGAAAAGGGGACACCGGAAACTCACTCTTCACCCGGAAATGGTTATTGAGGAACATGGCGTTGCTGGTGCGAGTCCTTAGGAACCAG ACTAGCATTTCTCAGTGGGTTCCAGTATGCAGCCGATTGATACCTGTGTCTCCTACCCAAGGACAGGGGGACAGGGCTCTGTCTCGCACTTCCCAGTGGC CCCAGATGAGCCAGTCCCGAGCATGTGGTGGATCAGAACAGATTCCTGGAATAGACATACAGCTGAATAGGAAGTATCACACCACACGTAAGCTTTCTAC TACCAAAGATTCCCCACAGCCTGTTGAGGAGAAGGTTGGTGCTTTCACAAAGATAATAGAAGCCATGGGATTCACGGGACCTTTGAAATACAGGTGTCAG ATGCCTGATACATTCAATTCATGGTTTCTTATAACCCTACTCCACGTCTGGATGTGTCTAGTCCGAATGAAGCAGGAAGGCCGGAGTGGGAAGTACATGT GTCGTATCATAGTTCATTTTATGTGGGAGGATGTTCAGCAGCGCGGCAGAGTCATGGGGGTTAATCCCTATATCCTGAAGAAGAACATGATCCTCATGAC AAATCATTTCTATGCAGCGATCTTGGGATATGATGAGGGGATCCTTTCAGATGATCATGGGCTGGCCGCTGCCCTCTGGAGAACCTTCTTCAACCGGAAA TGTGAAGACCCTCGACATCTTGAATTGCTGGTAGAGTATGTGAGGAAACAGATACAGTACCTGGACTCCATGAACGGGGAGGATCTGCTTCTGACAGGGG AGGTGAGCTGGCGCCCTCTAGTGGAGAAGAATCCTCAGAGCATCCTGAAGCCCCATTCTCCGACTTACAACGACGAGGGACTTTGATGGGCTGGGCCCTC CGCACGGCCCGCCAGCTGGCTTCGAGGAACCTCCAGGAGAGAAGTGCCTGTTGGTCCAGGACCCTGCAGAAAGTGGCCTGAACTGACCTCTGAACAGCAT CTGTCAAATACCTGGCCCCATTTGTGTTGAGTTTCCTCTTAGTGTGCCCAGGAGTCTGATCTGCTGGGGTACAGGGCTGGGAGAACCCCTAGCTCTCCCG GGGTGTCCTCTCCCTTAGGGGAAGCCCCGAGTGAGAGTCCCCCAGCACACACTCCCCAACCCCCTCCAGCAACTACATGTGACTGATAGCTTTTCCCAAA GGCCAAGGAAGGGATGGTGTAGGTTCAAAAGGGAAACCCCCCAGGGCCTGCTGTGGCCTAGGAGCAGATTGTAATGCTGCCGAGTCCGGTCGGTGACCAC GCGTTGTCCCTCGGCTTTCAGCCATGGGGTTGAGTTGGCCATTAAAAGAAACAGAGACTTCTCTCTGCCATGGCCCTTCTTTATTCCAGGGACTTAGAAA CTTGCCTGAGATGGTGGACGCAGTAATGAGGGCACCGCGCAGCTCAGTTAGAGACGGAGAAAGGGAAGAGGCTGGGATGGTCTCTGCTGCTCTTGCCTCT AGTTCATGGAGATGTGTCTCTGTTCAGGCCAAGATACAGCCAGCCAGGCCTGTCGTCTGGGACCCAGGAGGCCTCTGATGACCAAGGGCTTTCACATCCT AAGTCATTTGGAAGGAGGCCTTGAGAACAAAGTCACCTTTGTCACTCCCAGTGAACTGAATGAGGAACATGCTGTCTCCTGTCTTGGCCTCCCCTTTCAT GAGATACTGGGGAGAAGAGAACATTCCTCCTGGCTTAGTTGTAGCAGACCCAGACCTGTGCCCAGCTTTGGTCCCCCTTCCCAACTTCTGAAGCACGTGC TGCAGAGCCACCTTGGTCTGAGCACCTGAGGACCAGCCCCTCCTCCCTCAGTGCGGGTCATCTCTTGGGGGATTTTCTTAAAGTGAAGAAAGGGGGTGGG GAACCATATTGCCCCTCCCTCCCCCATCAAACTTCCTTCATTTAACTTGCTATAAAATGAGTCATATAAAGAAACTCTATATGGGTGAGGTATATCCCAC TTCTGTGAAAACATTACAAATCAAACCGCTTCTCTCAGTTTATTTAAGATGCTTTTGTTGCGAGCGGAGCTCTAGAGTGAAGCCTCCTGTGTGTGTGTGA GATAATAACACCTTGTAACTCATTACAGCTGGGCACTATTTACATAAACCAGAGCTGAGCCAGGCAGGAATTTGCTGATTAATTTATTTTTAATGGAGTG AAGTATACCATGCACCAAAATAAACTTTACTGTGTGTACCTAA

refseq_C20orf44.F1 (forward primer)
refseq_C20orf44.R1 (reverse primer)
Exon skipping and alternative donor or acceptor

Frame 0

KRRT*KRGHRKLTLHPEMVIEEHGVAGASP*EP D*HFSVGSSMQPIDTCVSYPRTGGQGSVSHFPVA PDEPVPSMWWIRTDSWNRHTAE*EVSHHT*AFY YQRFPTAC*GEGWCFHKDNRSHGIHGTFEIQVS DA*YIQFMVSYNPTPRLDVSSPNEAGRPEWEVHV SYHSSFYVGGCSAARQSHGG*SLYPEEEHDPHD KSFLCSDLGI**GDPFR*SWAGRCPLENLLQPE M*RPSTS*IAGRVCEETDTVPGLHERGGSASDRG GELAPSSGEESSEHPEAPFSDLQRRGTLMGWAL RTARQLASRNLQERSACWSRTLQKVA*TDL*TA SVKYLAPFVLSFLLVCPGV*SAGVQGWENP*LSR GVLSLRGSPE*ESPSTHSPTPSSNYM*LIAFPK GQGRDGVGSKGKPPRACCGLGADCNAAESGR*P RVVPRLSAMGLSWPLKETETSLCHGPSLFQGLRN LPEMVDAVMRAPRSSVRDGEREEAGMVSAALAS SSWRCVSVQAKIQPARPVVWDPGGL**PRAFTS *VIWKEALRTKSPLSLPVN*MRNMLSPVLASPFM RYWGEENIPPGLVVADPDLCPALVPLPNF*STC CRATLV*APEDQPLLPQCGSSLGGFS*SEERGW GTILPLPPPSNFLHLTCYKMSHIKKLYMGEVYPT SVKTLQIKPLLSVYLRCFCCERSSRVKPPVCV* DNNTL*LITAGHYLHKPELSQAGIC*LIYF*WS EVYHAPK*TLLCVP

Frame 1

KGGRRKGDTGNSLFTRKWLLRNMALLVRVLRNQ TSISQWVPVCSRLIPVSPTQGQGDRALSRTSQW PQMSQSRACGGSEQIPGIDIQLNRKYHTTRKLST TKDSPQPVEEKVGAFTKIIEAMGFTGPLKYRCQ MPDTFNSWFLITLLHVWMCLVRMKQEGRSGKYM CRIIVHFMWEDVQQRGRVMGVNPYILKKNMILMT NHFYAAILGYDEGILSDDHGLAAALWRTFFNRK CEDPRHLELLVEYVRKQIQYLDSMNGEDLLLTG EVSWRPLVEKNPQSILKPHSPTYNDEGL*WAGPS ARPASWLRGTSRREVPVGPGPCRKWPELTSEQH LSNTWPHLC*VSS*CAQESDLLGYRAGRTPSSP GVSSPLGEAPSESPPAHTPQPPPATTCD**LFPK AKEGMV*VQKGNPPGPAVA*EQIVMLPSPVGDH ALSLGFQPWG*VGH*KKQRLLSAMALLYSRDLE TCLRWWTQ**GHRAAQLETEKGKRLGWSLLLLPL VHGDVSLFRPRYSQPGLSSGTQEASDDQGLSHP KSFGRRP*EQSHLCHSQ*TE*GTCCLLSWPPLS *DTGEKRTFLLA*L*QTQTCAQLWSPFPTSEARA AEPPWSEHLRTSPSSLSAGHLLGDFLKVKKGGG EPYCPSLPHQTSFI*LAIK*VI*RNSIWVRYIP LL*KHYKSNRFSQFI*DAFVASGALE*SLLCVCE IITPCNSLQLGTIYINQS*ARQEFAD*FIFNGV KYTMHQNKLYCVYL

Frame 2

KEDVEKGTPETHSSPGNGY*GTWRCWCESLGTR LAFLSGFQYAAD*YLCLLPKDRGTGLCLALPSG PR*ASPEHVVDQNRFLE*TYS*IGSITPHVSFL LPKIPHSLLRRRLVLSQR**KPWDSRDL*NTGVR CLIHSIHGFL*PYSTSGCV*SE*SRKAGVGSTC VVS*FILCGRMFSSAAESWGLIPIS*RRT*SS* QIISMQRSWDMMRGSFQMIMGWPLPSGEPSSTGN VKTLDILNCW*SM*GNRYSTWTP*TGRICF*QG R*AGAL*WRRILRAS*SPILRLTTTRDFDGLGP PHGPPAGFEEPPGEKCLLVQDPAESGLN*PLNSI CQIPGPICVEFPLSVPRSLICWGTGLGEPLALP GCPLP*GKPRVRVPQHTLPNPLQQLHVTDSFSQ RPRKGWCRFKRETPQGLLWPRSRL*CCRVRSVTT RCPSAFSHGVELAIKRNRDFSLPWPFFIPGT*K LA*DGGRSNEGTAQLS*RRRKGRGWDGLCCSCL *FMEMCLCSGQDTASQACRLGPRRPLMTKGFHIL SHLEGGLENKVTFVTPSELNEEHAVSCLGLPFH EILGRREHSSWLSCSRPRPVPSFGPPSQLLKHV LQSHLGLST*GPAPPPSVRVISWGIFLK*RKGVG NHIAPPSPIKLPSFNLL*NESYKETLYG*GISH FCENITNQTASLSLFKMLLLRAEL*SEASCVCV R**HLVTHYSWALFT*TRAEPGRNLLINLFLME* SIPCTKINFTVCT*

Sequence NM_018244

AAAAGGAGGACGTAGAAAAGGGGACACCGGAAACTCACTCTTCACCCGGAAATGGTTATTGAGGAACATGGCGTTGCTGGTGCGAGTCCTTAGGAACCAG ACTAGCATTTCTCAGTGGGTTCCAGTATGCAGCCGATTGATACCTGTGTCTCCTACCCAAGGACAGGGGGACAGGGCTCTGTCTCGCACTTCCCAGTGGC CCCAGATGAGCCAGTCCCGAGCATGTGGTGGATCAGAACAGATTCCTGGAATAGACATACAGCTGAATAGGAAGTATCACACCACACGTAAGCTTTCTAC TACCAAAGATTCCCCACAGCCTGTTGAGGAGAAGGTTGGTGCTTTCACAAAGATAATAGAAGCCATGGGATTCACGGGACCTTTGAAATACAGTAAATGG AAGATTAAGATTGCGGCCCTGCGCATGTATACTAGCTGTGTGGAGAAAACTGACTTCGAGGAATTCTTTCTAAGGTGTCAGATGCCTGATACATTCAATT CATGGTTTCTTATAACCCTACTCCACGTCTGGATGTGTCTAGTCCGAATGAAGCAGGAAGGCCGGAGTGGGAAGTACATGTGTCGTATCATAGTTCATTT TATGTGGGAGGATGTTCAGCAGCGCGGCAGAGTCATGGGGGTTAATCCCTATATCCTGAAGAAGAACATGATCCTCATGACAAATCATTTCTATGCAGCG ATCTTGGGATATGATGAGGGGATCCTTTCAGATGATCATGGGCTGGCCGCTGCCCTCTGGAGAACCTTCTTCAACCGGAAATGTGAAGACCCTCGACATC TTGAATTGCTGGTAGAGTATGTGAGGAAACAGATACAGTACCTGGACTCCATGAACGGGGAGGATCTGCTTCTGACAGGGGAGGTGAGCTGGCGCCCTCT AGTGGAGAAGAATCCTCAGAGCATCCTGAAGCCCCATTCTCCGACTTACAACGACGAGGGACTTTGATGGGCTGGGCCCTCCGCACGGCCCGCCAGCTGG CTTCGAGGAACCTCCAGGAGAGAAGTGCCTGTTGGTCCAGGACCCTGCAGAAAGTGGCCTGAACTGACCTCTGAACAGCATCTGTCAAATACCTGGCCCC ATTTGTGTTGAGTTTCCTCTTAGTGTGCCCAGGAGTCTGATCTGCTGGGGTACAGGGCTGGGAGAACCCCTAGCTCTCCCGGGGTGTCCTCTCCCTTAGG GGAAGCCCCGAGTGAGAGTCCCCCAGCACACACTCCCCAACCCCCTCCAGCAACTACATGTGACTGATAGCTTTTCCCAAAGGCCAAGGAAGGGATGGTG TAGGTTCAAAAGGGAAACCCCCCAGGGCCTGCTGTGGCCTAGGAGCAGATTGTAATGCTGCCGAGTCCGGTCGGTGACCACGCGTTGTCCCTCGGCTTTC AGCCATGGGGTTGAGTTGGCCATTAAAAGAAACAGAGACTTCTCTCTGCCATGGCCCTTCTTTATTCCAGGGACTTAGAAACTTGCCTGAGATGGTGGAC GCAGTAATGAGGGCACCGCGCAGCTCAGTTAGAGACGGAGAAAGGGAAGAGGCTGGGATGGTCTCTGCTGCTCTTGCCTCTAGTTCATGGAGATGTGTCT CTGTTCAGGCCAAGATACAGCCAGCCAGGCCTGTCGTCTGGGACCCAGGAGGCCTCTGATGACCAAGGGCTTTCACATCCTAAGTCATTTGGAAGGAGGC CTTGAGAACAAAGTCACCTTTGTCACTCCCAGTGAACTGAATGAGGAACATGCTGTCTCCTGTCTTGGCCTCCCCTTTCATGAGATACTGGGGAGAAGAG AACATTCCTCCTGGCTTAGTTGTAGCAGACCCAGACCTGTGCCCAGCTTTGGTCCCCCTTCCCAACTTCTGAAGCACGTGCTGCAGAGCCACCTTGGTCT GAGCACCTGAGGACCAGCCCCTCCTCCCTCAGTGCGGGTCATCTCTTGGGGGATTTTCTTAAAGTGAAGAAAGGGGGTGGGGAACCATATTGCCCCTCCC TCCCCCATCAAACTTCCTTCATTTAACTTGCTATAAAATGAGTCATATAAAGAAACTCTATATGGGTGAGGTATATCCCACTTCTGTGAAAACATTACAA ATCAAACCGCTTCTCTCAGTTTATTTAAGATGCTTTTGTTGCGAGCGGAGCTCTAGAGTGAAGCCTCCTGTGTGTGTGTGAGATAATAACACCTTGTAAC TCATTACAGCTGGGCACTATTTACATAAACCAGAGCTGAGCCAGGCAGGAATTTGCTGATTAATTTATTTTTAATGGAGTGAAGTATACCATGCACCAAA ATAAACTTTACTGTGTGTACCTAA

refseq_C20orf44.F1 (forward primer)
refseq_C20orf44.R1 (reverse primer)
Exon skipping and alternative donor or acceptor

Frame 0

KRRT*KRGHRKLTLHPEMVIEEHGVAGASP*EP D*HFSVGSSMQPIDTCVSYPRTGGQGSVSHFPVA PDEPVPSMWWIRTDSWNRHTAE*EVSHHT*AFY YQRFPTAC*GEGWCFHKDNRSHGIHGTFEIQ*M ED*DCGPAHVY*LCGEN*LRGILSKVSDA*YIQF MVSYNPTPRLDVSSPNEAGRPEWEVHVSYHSSF YVGGCSAARQSHGG*SLYPEEEHDPHDKSFLCS DLGI**GDPFR*SWAGRCPLENLLQPEM*RPSTS *IAGRVCEETDTVPGLHERGGSASDRGGELAPS SGEESSEHPEAPFSDLQRRGTLMGWALRTARQL ASRNLQERSACWSRTLQKVA*TDL*TASVKYLAP FVLSFLLVCPGV*SAGVQGWENP*LSRGVLSLR GSPE*ESPSTHSPTPSSNYM*LIAFPKGQGRDG VGSKGKPPRACCGLGADCNAAESGR*PRVVPRLS AMGLSWPLKETETSLCHGPSLFQGLRNLPEMVD AVMRAPRSSVRDGEREEAGMVSAALASSSWRCV SVQAKIQPARPVVWDPGGL**PRAFTS*VIWKEA LRTKSPLSLPVN*MRNMLSPVLASPFMRYWGEE NIPPGLVVADPDLCPALVPLPNF*STCCRATLV *APEDQPLLPQCGSSLGGFS*SEERGWGTILPLP PPSNFLHLTCYKMSHIKKLYMGEVYPTSVKTLQ IKPLLSVYLRCFCCERSSRVKPPVCV*DNNTL* LITAGHYLHKPELSQAGIC*LIYF*WSEVYHAPK *TLLCVP

Frame 1

KGGRRKGDTGNSLFTRKWLLRNMALLVRVLRNQ TSISQWVPVCSRLIPVSPTQGQGDRALSRTSQW PQMSQSRACGGSEQIPGIDIQLNRKYHTTRKLST TKDSPQPVEEKVGAFTKIIEAMGFTGPLKYSKW KIKIAALRMYTSCVEKTDFEEFFLRCQMPDTFN SWFLITLLHVWMCLVRMKQEGRSGKYMCRIIVHF MWEDVQQRGRVMGVNPYILKKNMILMTNHFYAA ILGYDEGILSDDHGLAAALWRTFFNRKCEDPRH LELLVEYVRKQIQYLDSMNGEDLLLTGEVSWRPL VEKNPQSILKPHSPTYNDEGL*WAGPSARPASW LRGTSRREVPVGPGPCRKWPELTSEQHLSNTWP HLC*VSS*CAQESDLLGYRAGRTPSSPGVSSPLG EAPSESPPAHTPQPPPATTCD**LFPKAKEGMV *VQKGNPPGPAVA*EQIVMLPSPVGDHALSLGF QPWG*VGH*KKQRLLSAMALLYSRDLETCLRWWT Q**GHRAAQLETEKGKRLGWSLLLLPLVHGDVS LFRPRYSQPGLSSGTQEASDDQGLSHPKSFGRR P*EQSHLCHSQ*TE*GTCCLLSWPPLS*DTGEKR TFLLA*L*QTQTCAQLWSPFPTSEARAAEPPWS EHLRTSPSSLSAGHLLGDFLKVKKGGGEPYCPS LPHQTSFI*LAIK*VI*RNSIWVRYIPLL*KHYK SNRFSQFI*DAFVASGALE*SLLCVCEIITPCN SLQLGTIYINQS*ARQEFAD*FIFNGVKYTMHQ NKLYCVYL

Frame 2

KEDVEKGTPETHSSPGNGY*GTWRCWCESLGTR LAFLSGFQYAAD*YLCLLPKDRGTGLCLALPSG PR*ASPEHVVDQNRFLE*TYS*IGSITPHVSFL LPKIPHSLLRRRLVLSQR**KPWDSRDL*NTVNG RLRLRPCACILAVWRKLTSRNSF*GVRCLIHSI HGFL*PYSTSGCV*SE*SRKAGVGSTCVVS*FI LCGRMFSSAAESWGLIPIS*RRT*SS*QIISMQR SWDMMRGSFQMIMGWPLPSGEPSSTGNVKTLDI LNCW*SM*GNRYSTWTP*TGRICF*QGR*AGAL *WRRILRAS*SPILRLTTTRDFDGLGPPHGPPAG FEEPPGEKCLLVQDPAESGLN*PLNSICQIPGP ICVEFPLSVPRSLICWGTGLGEPLALPGCPLP* GKPRVRVPQHTLPNPLQQLHVTDSFSQRPRKGWC RFKRETPQGLLWPRSRL*CCRVRSVTTRCPSAF SHGVELAIKRNRDFSLPWPFFIPGT*KLA*DGG RSNEGTAQLS*RRRKGRGWDGLCCSCL*FMEMCL CSGQDTASQACRLGPRRPLMTKGFHILSHLEGG LENKVTFVTPSELNEEHAVSCLGLPFHEILGRR EHSSWLSCSRPRPVPSFGPPSQLLKHVLQSHLGL ST*GPAPPPSVRVISWGIFLK*RKGVGNHIAPP SPIKLPSFNLL*NESYKETLYG*GISHFCENIT NQTASLSLFKMLLLRAEL*SEASCVCVR**HLVT HYSWALFT*TRAEPGRNLLINLFLME*SIPCTK INFTVCT*