Sequences - Rnomics 📊 Palace

        ☰
    
        Rnomics 📊 Palace
    
                       Back to Rnomics Platform
            
                       Open Session

1 warning:

Access restricted to public data.
Please sign in at Rnomics Platform to access your data.

Navigation

Home

Sequences

Sequence NM_032141

GGCCACGTTCAGCGGACACGGGAGCAAGATGGCGATTCCGGGCAGGCAGTATGGGCTTATTTTGCCAAAGAAAACACAGCAGTTGCACCCTGTTTTGCAA AAACCATCAGTGTTTGGGAATGATTCTGATGATGATGATGAGACCTCTGTGAGTGAAAGCCTTCAGAGGGAAGCTGCTAAGAAGCAGGCCATGAAACAGA CCAAACTGGAAATCCAGAAGGCCCTTGCAGAAGATGCTACTGTGTATGAATATGACAGTATTTATGATGAAATGCAGAAAAAAAAGGAGGAAAATAATCC CAAATTGCTTTTGGGGAAAGACAGAAAGCCCAAGTATATTCACAACTTGCTAAAAGCAGTTGAGATCAGAAAAAAGGAACAGGAAAAAAGAATGGAAAAG AAAATACAGAGAGAACGAGAAATGGAAAAGGGGGAGTTTGATGATAAAGAAGCATTTGTGACATCTGCATATAAGAAAAAACTGCAAGAGAGAGCTGAAG AAGAAGAAAGAGAAAAGAGGGCTGCTGCACTGGAAGCATGTTTGGATGTAACCAAGCAGAAAGATCTCAGTGGATTTTATAGGCACCTATTAAATCAAGC AGTTGGTGAAGAGGAAGTACCTAAATGCAGCTTTCGTGAAGCCAGATCTGGTATAAAGGAAGAAAAATCAAGGGGCTTCTCCAATGAAGTAAGTTCAAAA AACAGAATACCACAAGAGAAATGCATTCTTCAAACTGATGTGAAAGTAGAGGAAAACCCAGATGCAGACAGTGACTTCGATGCTAAGAGCAGTGCGGATG ATGAAATAGAAGAAACTAGAGTGAACTGCAGAAGGGAAAAGGTCATAGAGACCCCTGAGAATGACTTCAAGCACCACAGGAGTCAAAACCACTCTCGGTC ACCTAGTGAAGAAAGAGGGCACAGTACCAGGCACCACACGAAAGGATCACGAACGTCGAGAGGACATGAGAAAAGGGAAGATCAGCACCAGCAGAAGCAA TCCAGAGACCAAGAGAACCATTACACTGACCGTGATTACCGGAAAGAAAGGGATTCTCATAGGCACAGAGAGGCCAGTCATAGAGATTCCCATTGGAAGA GGCATGAACAGGAAGATAAACCAAGGGCGAGGGACCAAAGAGAAAGAAGTGACAGAGTATGGAAAAGGGAGAAAGATAGGGAGAAATATTCCCAAAGAGA ACAAGAAAGAGATAGACAACAAAATGATCAGAACCGACCCAGTGAGAAAGGAGAGAAGGAAGAGAAAAGCAAAGCAAAGGAAGAGCATATGAAAGTAAGG AAGGAAAGATATGAAAATAATGATAAATACAGAGATAGAGAAAAACGAGAGGTAGGTGTTCAGTCTTCAGAAAGAAATCAAGACAGAAAGGAAAGCAGCC CAAATTCTAGGGCAAAGGATAAATTTCTTGACCAAGAAAGATCCAACAAAATGAGAAACATGGCAAAGGACAAAGAAAGAAACCAAGAGAAACCCTCTAA TTCTGAATCATCACTGGGAGCAAAACACAGACTCACAGAGGAAGGGCAAGAGAAGGGTAAAGAACAAGAGAGACCACCTGAGGCAGTGAGCAAGTTTGCA AAGCGGAACAATGAAGAAACTGTAATGTCAGCTAGAGACAGGTACTTGGCCAGGCAGATGGCGCGGGTTAATGCAAAGACCTATATTGAGAAAGAAGATG ATTGATGGCTACCCCAAGAGAAAGATTTAAGGAAGCACAGAAAACTGTAATTCCTGGAACCTGCTGCGTAAAACCATAAAGGAGTGTGTTACCAGTAGTT TGGAGGGCATTTTTAAATTTATTTTCAAAATTTTAAGTTAAAAGTCAGTCTTACAGCTTGGATGTTTGGATGTGGATGTTTGGCTGAATTTATATATAGT GTGTACTCATCAATACCACATTCTTTGTTGTATTCAAGAACCGTTAAGAGTGTGCTAATTCCCTGTAGGTACATAATGAGGAAAATTTGCTCCACTACAA CCATTAAAAAATAATTTTGGCCAGATACGGTAGCTCGTGCCTGTAATACCAACATTTTGGGAGGCCAAGGCAGAAGGATATTGAGGCTAGGCATTCAAGA CCAGCCTAGGCAGGATAATAAGACCTTGTCTCTATTTAAAAAACAAAAAGCCTAGCATGGTAGTCCATGCCTGTAGTCCCAGCTGTTCGAGAGGCTGAGG CAAGAAGATCACTTGAGCCTAGGAATTTGATGTTACAGTGAGGTATGATCATGCCACTGCACTCCAACCTGGGCAACAGAATGAGACCCTGTCTCTAAAA AATTTTTTTTAAATAAATAATTTAACTCTTCTAATAATGTTTTGTTGCAGGAAATGTATTTCAGATAAAATATGGATTTGAAAAACAGAAAATATACTTT ATGTTCTGAAATTTGTATTTAAGTATAAAATGTGAATCATCTTGTCTAAATAGCTTACAGCATAGTTGGCTTAAATGAAAATAAAATGATATGCTTATA

refseq_CCDC55.F1 (forward primer)
refseq_CCDC55.R1 (reverse primer)
Single exon skipping

Frame 0

GHVQRTREQDGDSGQAVWAYFAKENTAVAPCFA KTISVWE*F*****DLCE*KPSEGSC*EAGHETD QTGNPEGPCRRCYCV*I*QYL**NAEKKGGK*S QIAFGERQKAQVYSQLAKSS*DQKKGTGKKNGK ENTERTRNGKGGV***RSICDICI*EKTARES*R RRKRKEGCCTGSMFGCNQAERSQWIL*APIKSS SW*RGST*MQLS*SQIWYKGRKIKGLLQ*SKFK KQNTTREMHSSN*CESRGKPRCRQ*LRC*EQCG* *NRRN*SELQKGKGHRDP*E*LQAPQESKPLSV T**RKRAQYQAPHERITNVERT*EKGRSAPAEA IQRPREPLH*P*LPERKGFS*AQRGQS*RFPLEE A*TGR*TKGEGPKRKK*QSMEKGER*GEIFPKR TRKR*TTK*SEPTQ*ERREGREKQSKGRAYESK EGKI*K***IQR*RKTRGRCSVFRKKSRQKGKQP KF*GKG*IS*PRKIQQNEKHGKGQRKKPRETL* F*IITGSKTQTHRGRAREG*RTRETT*GSEQVC KAEQ*RNCNVS*RQVLGQADGAG*CKDLY*ERR* LMATPRERFKEAQKTVIPGTCCVKP*RSVLPVV WRAFLNLFSKF*VKSQSYSLDVWMWMFG*IYI* CVLINTTFFVVFKNR*ECANSL*VHNEENLLHYN H*KIILARYGSSCL*YQHFGRPRQKDIEARHSR PA*AG**DLVSI*KTKSLAW*SMPVVPAVREAE ARRSLEPRNLMLQ*GMIMPLHSNLGNRMRPCL*K IFFK*II*LF**CFVAGNVFQIKYGFEKQKIYF MF*NLYLSIKCESSCLNSLQHSWLK*K*NDMLI

Frame 1

ATFSGHGSKMAIPGRQYGLILPKKTQQLHPVLQ KPSVFGNDSDDDDETSVSESLQREAAKKQAMKQ TKLEIQKALAEDATVYEYDSIYDEMQKKKEENNP KLLLGKDRKPKYIHNLLKAVEIRKKEQEKRMEK KIQREREMEKGEFDDKEAFVTSAYKKKLQERAE EEEREKRAAALEACLDVTKQKDLSGFYRHLLNQA VGEEEVPKCSFREARSGIKEEKSRGFSNEVSSK NRIPQEKCILQTDVKVEENPDADSDFDAKSSAD DEIEETRVNCRREKVIETPENDFKHHRSQNHSRS PSEERGHSTRHHTKGSRTSRGHEKREDQHQQKQ SRDQENHYTDRDYRKERDSHRHREASHRDSHWK RHEQEDKPRARDQRERSDRVWKREKDREKYSQRE QERDRQQNDQNRPSEKGEKEEKSKAKEEHMKVR KERYENNDKYRDREKREVGVQSSERNQDRKESS PNSRAKDKFLDQERSNKMRNMAKDKERNQEKPSN SESSLGAKHRLTEEGQEKGKEQERPPEAVSKFA KRNNEETVMSARDRYLARQMARVNAKTYIEKED D*WLPQEKDLRKHRKL*FLEPAA*NHKGVCYQ*F GGHF*IYFQNFKLKVSLTAWMFGCGCLAEFIYS VYSSIPHSLLYSRTVKSVLIPCRYIMRKICSTT TIKK*FWPDTVARACNTNILGGQGRRILRLGIQD QPRQDNKTLSLFKKQKA*HGSPCL*SQLFERLR QEDHLSLGI*CYSEV*SCHCTPTWATE*DPVSK KFFLNK*FNSSNNVLLQEMYFR*NMDLKNRKYTL CSEICI*V*NVNHLV*IAYSIVGLNENKMICL

Frame 2

PRSADTGARWRFRAGSMGLFCQRKHSSCTLFCK NHQCLGMILMMMMRPL*VKAFRGKLLRSRP*NR PNWKSRRPLQKMLLCMNMTVFMMKCRKKRRKII PNCFWGKTESPSIFTTC*KQLRSEKRNRKKEWKR KYRENEKWKRGSLMIKKHL*HLHIRKNCKRELK KKKEKRGLLHWKHVWM*PSRKISVDFIGTY*IK QLVKRKYLNAAFVKPDLV*RKKNQGASPMK*VQK TEYHKRNAFFKLM*K*RKTQMQTVTSMLRAVRM MK*KKLE*TAEGKRS*RPLRMTSSTTGVKTTLG HLVKKEGTVPGTTRKDHERREDMRKGKISTSRSN PETKRTITLTVITGKKGILIGTERPVIEIPIGR GMNRKINQGRGTKEKEVTEYGKGRKIGRNIPKE NKKEIDNKMIRTDPVRKERRKRKAKQRKSI*K*G RKDMKIMINTEIEKNER*VFSLQKEIKTERKAA QILGQRINFLTKKDPTK*ETWQRTKKETKRNPL ILNHHWEQNTDSQRKGKRRVKNKRDHLRQ*ASLQ SGTMKKL*CQLETGTWPGRWRGLMQRPILRKKM IDGYPKRKI*GSTENCNSWNLLRKTIKECVTSS LEGIFKFIFKILS*KSVLQLGCLDVDVWLNLYIV CTHQYHILCCIQEPLRVC*FPVGT**GKFAPLQ PLKNNFGQIR*LVPVIPTFWEAKAEGY*G*AFK TSLGRIIRPCLYLKNKKPSMVVHACSPSCSRG*G KKIT*A*EFDVTVRYDHATALQPGQQNETLSLK NFF*INNLTLLIMFCCRKCISDKIWI*KTENIL YVLKFVFKYKM*IILSK*LTA*LA*MKIK*YAY

Sequence NM_001033563

GGCCACGTTCAGCGGACACGGGAGCAAGATGGCGATTCCGGGCAGGCAGTATGGGCTTATTTTGCCAAAGAAAACACAGCAGTTGCACCCTGTTTTGCAA AAACCATCAGTGTTTGGGAATGATTCTGATGATGATGATGAGTAGAGACGGGGCTTCATCAGGTTGGCCACGCTGATCTCAAACTCCTGAGCTCAAGTGA TCCAGCCGCCTCAGCCTCCCAAAGCGCTGGGATTACAGACCTCTGTGAGTGAAAGCCTTCAGAGGGAAGCTGCTAAGAAGCAGGCCATGAAACAGACCAA ACTGGAAATCCAGAAGGCCCTTGCAGAAGATGCTACTGTGTATGAATATGACAGTATTTATGATGAAATGCAGAAAAAAAAGGAGGAAAATAATCCCAAA TTGCTTTTGGGGAAAGACAGAAAGCCCAAGTATATTCACAACTTGCTAAAAGCAGTTGAGATCAGAAAAAAGGAACAGGAAAAAAGAATGGAAAAGAAAA TACAGAGAGAACGAGAAATGGAAAAGGGGGAGTTTGATGATAAAGAAGCATTTGTGACATCTGCATATAAGAAAAAACTGCAAGAGAGAGCTGAAGAAGA AGAAAGAGAAAAGAGGGCTGCTGCACTGGAAGCATGTTTGGATGTAACCAAGCAGAAAGATCTCAGTGGATTTTATAGGCACCTATTAAATCAAGCAGTT GGTGAAGAGGAAGTACCTAAATGCAGCTTTCGTGAAGCCAGATCTGGTATAAAGGAAGAAAAATCAAGGGGCTTCTCCAATGAAGTAAGTTCAAAAAACA GAATACCACAAGAGAAATGCATTCTTCAAACTGATGTGAAAGTAGAGGAAAACCCAGATGCAGACAGTGACTTCGATGCTAAGAGCAGTGCGGATGATGA AATAGAAGAAACTAGAGTGAACTGCAGAAGGGAAAAGGTCATAGAGACCCCTGAGAATGACTTCAAGCACCACAGGAGTCAAAACCACTCTCGGTCACCT AGTGAAGAAAGAGGGCACAGTACCAGGCACCACACGAAAGGATCACGAACGTCGAGAGGACATGAGAAAAGGGAAGATCAGCACCAGCAGAAGCAATCCA GAGACCAAGAGAACCATTACACTGACCGTGATTACCGGAAAGAAAGGGATTCTCATAGGCACAGAGAGGCCAGTCATAGAGATTCCCATTGGAAGAGGCA TGAACAGGAAGATAAACCAAGGGCGAGGGACCAAAGAGAAAGAAGTGACAGAGTATGGAAAAGGGAGAAAGATAGGGAGAAATATTCCCAAAGAGAACAA GAAAGAGATAGACAACAAAATGATCAGAACCGACCCAGTGAGAAAGGAGAGAAGGAAGAGAAAAGCAAAGCAAAGGAAGAGCATATGAAAGTAAGGAAGG AAAGATATGAAAATAATGATAAATACAGAGATAGAGAAAAACGAGAGGTAGGTGTTCAGTCTTCAGAAAGAAATCAAGACAGAAAGGAAAGCAGCCCAAA TTCTAGGGCAAAGGATAAATTTCTTGACCAAGAAAGATCCAACAAAATGAGAAACATGGCAAAGGACAAAGAAAGAAACCAAGAGAAACCCTCTAATTCT GAATCATCACTGGGAGCAAAACACAGACTCACAGAGGAAGGGCAAGAGAAGGGTAAAGAACAAGAGAGACCACCTGAGGCAGTGAGCAAGTTTGCAAAGC GGAACAATGAAGAAACTGTAATGTCAGCTAGAGACAGGTACTTGGCCAGGCAGATGGCGCGGGTTAATGCAAAGACCTATATTGAGAAAGAAGATGATTG ATGGCTACCCCAAGAGAAAGATTTAAGGAAGCACAGAAAACTGTAATTCCTGGAACCTGCTGCGTAAAACCATAAAGGAGTGTGTTACCAGTAGTTTGGA GGGCATTTTTAAATTTATTTTCAAAATTTTAAGTTAAAAGTCAGTCTTACAGCTTGGATGTTTGGATGTGGATGTTTGGCTGAATTTATATATAGTGTGT ACTCATCAATACCACATTCTTTGTTGTATTCAAGAACCGTTAAGAGTGTGCTAATTCCCTGTAGGTACATAATGAGGAAAATTTGCTCCACTACAACCAT TAAAAAATAATTTTGGCCAGATACGGTAGCTCGTGCCTGTAATACCAACATTTTGGGAGGCCAAGGCAGAAGGATATTGAGGCTAGGCATTCAAGACCAG CCTAGGCAGGATAATAAGACCTTGTCTCTATTTAAAAAACAAAAAGCCTAGCATGGTAGTCCATGCCTGTAGTCCCAGCTGTTCGAGAGGCTGAGGCAAG AAGATCACTTGAGCCTAGGAATTTGATGTTACAGTGAGGTATGATCATGCCACTGCACTCCAACCTGGGCAACAGAATGAGACCCTGTCTCTAAAAAATT TTTTTTAAATAAATAATTTAACTCTTCTAATAATGTTTTGTTGCAGGAAATGTATTTCAGATAAAATATGGATTTGAAAAACAGAAAATATACTTTATGT TCTGAAATTTGTATTTAAGTATAAAATGTGAATCATCTTGTCTAAATAGCTTACAGCATAGTTGGCTTAAATGAAAATAAAATGATATGCTTATA

refseq_CCDC55.F1 (forward primer)
refseq_CCDC55.R1 (reverse primer)
Single exon skipping

Frame 0

GHVQRTREQDGDSGQAVWAYFAKENTAVAPCFA KTISVWE*F*****VETGLHQVGHADLKLLSSSD PAASASQSAGITDLCE*KPSEGSC*EAGHETDQ TGNPEGPCRRCYCV*I*QYL**NAEKKGGK*SQ IAFGERQKAQVYSQLAKSS*DQKKGTGKKNGKEN TERTRNGKGGV***RSICDICI*EKTARES*RR RKRKEGCCTGSMFGCNQAERSQWIL*APIKSSS W*RGST*MQLS*SQIWYKGRKIKGLLQ*SKFKKQ NTTREMHSSN*CESRGKPRCRQ*LRC*EQCG** NRRN*SELQKGKGHRDP*E*LQAPQESKPLSVT **RKRAQYQAPHERITNVERT*EKGRSAPAEAIQ RPREPLH*P*LPERKGFS*AQRGQS*RFPLEEA *TGR*TKGEGPKRKK*QSMEKGER*GEIFPKRT RKR*TTK*SEPTQ*ERREGREKQSKGRAYESKEG KI*K***IQR*RKTRGRCSVFRKKSRQKGKQPK F*GKG*IS*PRKIQQNEKHGKGQRKKPRETL*F *IITGSKTQTHRGRAREG*RTRETT*GSEQVCKA EQ*RNCNVS*RQVLGQADGAG*CKDLY*ERR*L MATPRERFKEAQKTVIPGTCCVKP*RSVLPVVW RAFLNLFSKF*VKSQSYSLDVWMWMFG*IYI*CV LINTTFFVVFKNR*ECANSL*VHNEENLLHYNH *KIILARYGSSCL*YQHFGRPRQKDIEARHSRP A*AG**DLVSI*KTKSLAW*SMPVVPAVREAEAR RSLEPRNLMLQ*GMIMPLHSNLGNRMRPCL*KI FFK*II*LF**CFVAGNVFQIKYGFEKQKIYFM F*NLYLSIKCESSCLNSLQHSWLK*K*NDMLI

Frame 1

ATFSGHGSKMAIPGRQYGLILPKKTQQLHPVLQ KPSVFGNDSDDDDE*RRGFIRLATLISNS*AQV IQPPQPPKALGLQTSVSESLQREAAKKQAMKQTK LEIQKALAEDATVYEYDSIYDEMQKKKEENNPK LLLGKDRKPKYIHNLLKAVEIRKKEQEKRMEKK IQREREMEKGEFDDKEAFVTSAYKKKLQERAEEE EREKRAAALEACLDVTKQKDLSGFYRHLLNQAV GEEEVPKCSFREARSGIKEEKSRGFSNEVSSKN RIPQEKCILQTDVKVEENPDADSDFDAKSSADDE IEETRVNCRREKVIETPENDFKHHRSQNHSRSP SEERGHSTRHHTKGSRTSRGHEKREDQHQQKQS RDQENHYTDRDYRKERDSHRHREASHRDSHWKRH EQEDKPRARDQRERSDRVWKREKDREKYSQREQ ERDRQQNDQNRPSEKGEKEEKSKAKEEHMKVRK ERYENNDKYRDREKREVGVQSSERNQDRKESSPN SRAKDKFLDQERSNKMRNMAKDKERNQEKPSNS ESSLGAKHRLTEEGQEKGKEQERPPEAVSKFAK RNNEETVMSARDRYLARQMARVNAKTYIEKEDD* WLPQEKDLRKHRKL*FLEPAA*NHKGVCYQ*FG GHF*IYFQNFKLKVSLTAWMFGCGCLAEFIYSV YSSIPHSLLYSRTVKSVLIPCRYIMRKICSTTTI KK*FWPDTVARACNTNILGGQGRRILRLGIQDQ PRQDNKTLSLFKKQKA*HGSPCL*SQLFERLRQ EDHLSLGI*CYSEV*SCHCTPTWATE*DPVSKKF FLNK*FNSSNNVLLQEMYFR*NMDLKNRKYTLC SEICI*V*NVNHLV*IAYSIVGLNENKMICL

Frame 2

PRSADTGARWRFRAGSMGLFCQRKHSSCTLFCK NHQCLGMILMMMMSRDGASSGWPR*SQTPELK* SSRLSLPKRWDYRPL*VKAFRGKLLRSRP*NRP NWKSRRPLQKMLLCMNMTVFMMKCRKKRRKIIPN CFWGKTESPSIFTTC*KQLRSEKRNRKKEWKRK YRENEKWKRGSLMIKKHL*HLHIRKNCKRELKK KKEKRGLLHWKHVWM*PSRKISVDFIGTY*IKQL VKRKYLNAAFVKPDLV*RKKNQGASPMK*VQKT EYHKRNAFFKLM*K*RKTQMQTVTSMLRAVRMM K*KKLE*TAEGKRS*RPLRMTSSTTGVKTTLGHL VKKEGTVPGTTRKDHERREDMRKGKISTSRSNP ETKRTITLTVITGKKGILIGTERPVIEIPIGRG MNRKINQGRGTKEKEVTEYGKGRKIGRNIPKENK KEIDNKMIRTDPVRKERRKRKAKQRKSI*K*GR KDMKIMINTEIEKNER*VFSLQKEIKTERKAAQ ILGQRINFLTKKDPTK*ETWQRTKKETKRNPLIL NHHWEQNTDSQRKGKRRVKNKRDHLRQ*ASLQS GTMKKL*CQLETGTWPGRWRGLMQRPILRKKMI DGYPKRKI*GSTENCNSWNLLRKTIKECVTSSLE GIFKFIFKILS*KSVLQLGCLDVDVWLNLYIVC THQYHILCCIQEPLRVC*FPVGT**GKFAPLQP LKNNFGQIR*LVPVIPTFWEAKAEGY*G*AFKTS LGRIIRPCLYLKNKKPSMVVHACSPSCSRG*GK KIT*A*EFDVTVRYDHATALQPGQQNETLSLKN FF*INNLTLLIMFCCRKCISDKIWI*KTENILYV LKFVFKYKM*IILSK*LTA*LA*MKIK*YAY