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Sequences

Sequence NM_194447

CTGTGATTCTCACTATACTGGTCCTGAGGAAAGGGCTTCTGTGAACTGCGGTTTTTAGTTTTTATTGTGGTTCTTAGTTCTCATGAGACCCCTCTTGAGG
ATATGTGCCTATCTGGTGCCTCTGCTCTCCACTAGTTGAGTGAAAGGAAGGAGGTAATTTACCACCATGTTTGGTTCCTGTTTATAAGATGTTTTAAGAA
AGATCTGAAACAGATTTTCTGAAGAAAGCAGAAGCTCTCTTCCCATTATGACTTCGGAAATCACTTATGCTGAAGTGAGGTTCAAAAATGAATTCAAGTC
CTCAGGCATCAACACAGCCTCTTCTGCAGTCTTTCAAAAATATTCTCAGCTTCTTGAAAAAAAGACTACAAAAGAGCTGGTTCATACAACATTGGAGTGT
GTGAAAAAAAATATGCCCGTGGAAGAGACAGCCTGGAGCTGTTGCCCAAAGAATTGGAAGTCATTTAGTTCCAACTGCTACTTTATTTCTACTGAATCAG
CATCTTGGCAAGACAGTGAGAAGGACTGTGCTAGAATGGAGGCTCACCTGCTGGTGATAAACACTCAAGAAGAGCAGGATTTCATCTTCCAGAATCTGCA
AGAAGAATCTGCTTATTTTGTGGGGCTCTCAGATCCAGAAGGTCAGCGACATTGGCAATGGGTTGATCAGACACCATACAATGAAAGTTCCACATTCTGG
CATCCACGTGAGCCCAGTGATCCCAATGAGCGCTGCGTTGTGCTAAATTTTCGTAAATCACCCAAAAGATGGGGCTGGAATGATGTTAATTGTCTTGGTC
CTCAAAGGTCAGTTTGTGAGATGATGAAGATCCACTTATGAACTGAACATTCTCCATGAACAGGTGGTTGGATTGGTATCTGTCATTGTAGGGATAGATA
ATAAGCTCTTCTTATTCATGTGTAAGGGAGGTCCATAGAATTTAGGTGGTCTGTCAACTATTCTACTTATGAGAGAATTGGTCTGTACATTGACTGATTC
ACTTTTTCATAAAGTGAGCATTTATTGAGCATTTTTTCATGTGCCAGAGCCTGTACTGGAGGCCCCCATTGTGCACACATGGAGAGAACATGAGTCTCTC
TTAATTTTTATCTGGTTGCTAAAGAATTATTTACCAATAAAATTATATGATGTGGTGTCTC
  • refseq_CLEC4A.F3 (forward primer)
  • refseq_CLEC4A.R3 (reverse primer)
  • Exon skipping and alternative donor or acceptor

Frame 0

L*FSLYWS*GKGFCELRFLVFIVVLSSHETPLE
DMCLSGASALH*LSERKEVIYHHVWFLFIRCFKK
DLKQIF*RKQKLSSHYDFGNHLC*SEVQK*IQV
LRHQHSLFCSLSKIFSAS*KKDYKRAGSYNIGV
CEKKYARGRDSLELLPKELEVI*FQLLLYFY*IS
ILARQ*EGLC*NGGSPAGDKHSRRAGFHLPESA
RRICLFCGALRSRRSATLAMG*SDTIQ*KFHIL
AST*AQ*SQ*ALRCAKFS*ITQKMGLE*C*LSWS
SKVSL*DDEDPLMN*TFSMNRWLDWYLSL*G*I
ISSSYSCVREVHRI*VVCQLFYL*ENWSVH*LI
HFFIK*AFIEHFFMCQSLYWRPPLCTHGENMSLS
*FLSGC*RIIYQ*NYMMWCL

Frame 1

CDSHYTGPEERASVNCGF*FLLWFLVLMRPLLR
ICAYLVPLLSTS*VKGRR*FTTMFGSCL*DVLR
KI*NRFSEESRSSLPIMTSEITYAEVRFKNEFKS
SGINTASSAVFQKYSQLLEKKTTKELVHTTLEC
VKKNMPVEETAWSCCPKNWKSFSSNCYFISTES
ASWQDSEKDCARMEAHLLVINTQEEQDFIFQNLQ
EESAYFVGLSDPEGQRHWQWVDQTPYNESSTFW
HPREPSDPNERCVVLNFRKSPKRWGWNDVNCLG
PQRSVCEMMKIHL*TEHSP*TGGWIGICHCRDR*
*ALLIHV*GRSIEFRWSVNYSTYERIGLYID*F
TFS*SEHLLSIFSCARACTGGPHCAHMERT*VS
LNFYLVAKELFTNKII*CGV

Frame 2

VILTILVLRKGLL*TAVFSFYCGS*FS*DPS*G
YVPIWCLCSPLVE*KEGGNLPPCLVPVYKMF*E
RSETDFLKKAEALFPL*LRKSLMLK*GSKMNSS
PQASTQPLLQSFKNILSFLKKRLQKSWFIQHWSV
*KKICPWKRQPGAVAQRIGSHLVPTATLFLLNQ
HLGKTVRRTVLEWRLTCW**TLKKSRISSSRIC
KKNLLILWGSQIQKVSDIGNGLIRHHTMKVPHSG
IHVSPVIPMSAALC*IFVNHPKDGAGMMLIVLV
LKGQFVR**RSTYELNILHEQVVGLVSVIVGID
NKLFLFMCKGGP*NLGGLSTILLMRELVCTLTDS
LFHKVSIY*AFFHVPEPVLEAPIVHTWREHESL
LIFIWLLKNYLPIKLYDVVS

Sequence NM_016184

CTGTGATTCTCACTATACTGGTCCTGAGGAAAGGGCTTCTGTGAACTGCGGTTTTTAGTTTTTATTGTGGTTCTTAGTTCTCATGAGACCCCTCTTGAGG
ATATGTGCCTATCTGGTGCCTCTGCTCTCCACTAGTTGAGTGAAAGGAAGGAGGTAATTTACCACCATGTTTGGTTCCTGTTTATAAGATGTTTTAAGAA
AGATCTGAAACAGATTTTCTGAAGAAAGCAGAAGCTCTCTTCCCATTATGACTTCGGAAATCACTTATGCTGAAGTGAGGTTCAAAAATGAATTCAAGTC
CTCAGGCATCAACACAGCCTCTTCTGCAGCTTCCAAGGAGAGGACTGCCCCTCACAAAAGTAATACCGGATTCCCCAAGCTGCTTTGTGCCTCACTGTTG
ATATTTTTCCTGCTATTGGCAATCTCATTCTTTATTGCTTTTGTCATTTTCTTTCAAAAATATTCTCAGCTTCTTGAAAAAAAGACTACAAAAGAGCTGG
TTCATACAACATTGGAGTGTGTGAAAAAAAATATGCCCGTGGAAGAGACAGCCTGGAGCTGTTGCCCAAAGAATTGGAAGTCATTTAGTTCCAACTGCTA
CTTTATTTCTACTGAATCAGCATCTTGGCAAGACAGTGAGAAGGACTGTGCTAGAATGGAGGCTCACCTGCTGGTGATAAACACTCAAGAAGAGCAGGAT
TTCATCTTCCAGAATCTGCAAGAAGAATCTGCTTATTTTGTGGGGCTCTCAGATCCAGAAGGTCAGCGACATTGGCAATGGGTTGATCAGACACCATACA
ATGAAAGTTCCACATTCTGGCATCCACGTGAGCCCAGTGATCCCAATGAGCGCTGCGTTGTGCTAAATTTTCGTAAATCACCCAAAAGATGGGGCTGGAA
TGATGTTAATTGTCTTGGTCCTCAAAGGTCAGTTTGTGAGATGATGAAGATCCACTTATGAACTGAACATTCTCCATGAACAGGTGGTTGGATTGGTATC
TGTCATTGTAGGGATAGATAATAAGCTCTTCTTATTCATGTGTAAGGGAGGTCCATAGAATTTAGGTGGTCTGTCAACTATTCTACTTATGAGAGAATTG
GTCTGTACATTGACTGATTCACTTTTTCATAAAGTGAGCATTTATTGAGCATTTTTTCATGTGCCAGAGCCTGTACTGGAGGCCCCCATTGTGCACACAT
GGAGAGAACATGAGTCTCTCTTAATTTTTATCTGGTTGCTAAAGAATTATTTACCAATAAAATTATATGATGTGGTGTCTC
  • refseq_CLEC4A.F3 (forward primer)
  • refseq_CLEC4A.R3 (reverse primer)
  • Exon skipping and alternative donor or acceptor

Frame 0

L*FSLYWS*GKGFCELRFLVFIVVLSSHETPLE
DMCLSGASALH*LSERKEVIYHHVWFLFIRCFKK
DLKQIF*RKQKLSSHYDFGNHLC*SEVQK*IQV
LRHQHSLFCSFQGEDCPSQK*YRIPQAALCLTV
DIFPAIGNLILYCFCHFLSKIFSAS*KKDYKRAG
SYNIGVCEKKYARGRDSLELLPKELEVI*FQLL
LYFY*ISILARQ*EGLC*NGGSPAGDKHSRRAG
FHLPESARRICLFCGALRSRRSATLAMG*SDTIQ
*KFHILAST*AQ*SQ*ALRCAKFS*ITQKMGLE
*C*LSWSSKVSL*DDEDPLMN*TFSMNRWLDWY
LSL*G*IISSSYSCVREVHRI*VVCQLFYL*ENW
SVH*LIHFFIK*AFIEHFFMCQSLYWRPPLCTH
GENMSLS*FLSGC*RIIYQ*NYMMWCL

Frame 1

CDSHYTGPEERASVNCGF*FLLWFLVLMRPLLR
ICAYLVPLLSTS*VKGRR*FTTMFGSCL*DVLR
KI*NRFSEESRSSLPIMTSEITYAEVRFKNEFKS
SGINTASSAASKERTAPHKSNTGFPKLLCASLL
IFFLLLAISFFIAFVIFFQKYSQLLEKKTTKEL
VHTTLECVKKNMPVEETAWSCCPKNWKSFSSNCY
FISTESASWQDSEKDCARMEAHLLVINTQEEQD
FIFQNLQEESAYFVGLSDPEGQRHWQWVDQTPY
NESSTFWHPREPSDPNERCVVLNFRKSPKRWGWN
DVNCLGPQRSVCEMMKIHL*TEHSP*TGGWIGI
CHCRDR**ALLIHV*GRSIEFRWSVNYSTYERI
GLYID*FTFS*SEHLLSIFSCARACTGGPHCAHM
ERT*VSLNFYLVAKELFTNKII*CGV

Frame 2

VILTILVLRKGLL*TAVFSFYCGS*FS*DPS*G
YVPIWCLCSPLVE*KEGGNLPPCLVPVYKMF*E
RSETDFLKKAEALFPL*LRKSLMLK*GSKMNSS
PQASTQPLLQLPRRGLPLTKVIPDSPSCFVPHC*
YFSCYWQSHSLLLLSFSFKNILSFLKKRLQKSW
FIQHWSV*KKICPWKRQPGAVAQRIGSHLVPTA
TLFLLNQHLGKTVRRTVLEWRLTCW**TLKKSRI
SSSRICKKNLLILWGSQIQKVSDIGNGLIRHHT
MKVPHSGIHVSPVIPMSAALC*IFVNHPKDGAG
MMLIVLVLKGQFVR**RSTYELNILHEQVVGLVS
VIVGIDNKLFLFMCKGGP*NLGGLSTILLMREL
VCTLTDSLFHKVSIY*AFFHVPEPVLEAPIVHT
WREHESLLIFIWLLKNYLPIKLYDVVS

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