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Sequences

Sequence NM_001005268

ACCTAAGCGATGAAATCCAAAGGTGAATCTTTTGGTTGGTGATTTTGATGATAGCCACAAAGCAAGCAGGCTGTATGGTAGCCTTGAAAACCAACAGGCC
ACAATCACAGTGAAAACCTCAGGTTGGCAGCCACTGGAGGATACAAAATGAGTTTGGATCTCCTTCAATGCCCCATTCCCAGAGAACTGTCATTATTTGA
CCTGCTGGTAGTTCCCTAAAGGACGTGCAAGGATGTTTTTATTTGACTGGACACTTGAAGCTTGCCCTGTATGAACAGCCCCCATCTTCCCATGCTTGTC
AAAAATCAGAGGCAACTAACACTGCGGCTTCCTGAGGGAACTCCGGATGTGACTCCTGTTACATGAAAATGGAAGAGGTCAGAGTTGTCCAAGAGGGAGG
CCAGCCACATCCAGGCAGGGCCCCCATGGTCAGAACCCTGCTAGAGCCATCAAGGTCCCAGATGAGTCTGGAAGTGTTAGTTGCAAAGATATGCATTTAC
TTCTCTGGCTACAAAAAAGAATAGAAATGCACAAAGCAGAGCAGTGTGAAGAAGAAGAGGCGATGACCCCTAGACCGACCAAAGCCCGTGCTCCACTGCC
CAGTGCCTATGTCCCACCACTGTCGCTGCCACCCTGCCCGAGAGAAAGGCTGAAGGGGATGCTAAAGGAGATAAAACCAAGGTTAAGTAGGAACTGCAGA
GAAGATCCACAAGGTTGTCTGCTAAACCTGCTCCTCCAAAGCCACAGCCGAAGCCCAGAAAGGCCTCTGCAAAGAAGAGAGAGAAGGTACCTACAGAGAA
GAAGGGAAAAGCTGATGCTGGCAAGGAGGGGAATAACCCTGCAGAAAATGGAGATGCCAAAACAGACTAGGCACAGAAAGCTAAAGGTGCTGGAGATGCC
AAGTGAAGTGTGTGCATTTTTGATAACTGTGTACTTCTGGTGACTGTACAGTTTGAAATACTATTTTTTAATCAAGTTTTATAAAAATGCAGATTTTGTT
TAGCTTTTTTTTTTTTTTTTAAGCTATGTTAGTACACAGAATACTTCATTGTTGTTTTGGGGAGAAGGGCCATATGTCACTAATAGAAAGCCCCTGAAGC
TGGACTGATGTGGGGAAAACACCTTTTCCTTCTGGTTTTGAGAGACTTCCTCTTGGGTCCCAGGAAGAGGGATTCCCTGACTTTGATACACATGGCCACC
TTGGTATAAAAGCCTTGTGGTATGGAAAAACAAATTCGTTTTTTATGTCCTCTTCTCTGTTTCTACCTTTCAGAATGGACTTAAATCCCTTAAACCCAGA
CATCTTCTGGGACCTGACCCCCAATAATTGGTTACCAGTGTGTCAGGCAATCTGGACTTTGCCCTCAAAAGAGCAGTGGTTCCTGTTTCTAGGTTGTGGA
TCTTCAGATAAATTCTGTCATTTTCCTTTCACTTCCTGAAAGCCAGGGTCGGTTCATGAAAAGCTATGAAACAGCATGCTAAATGTGAAATGTCAACCCT
CACTAAACTTTGCCGGTTCAGAGCATCAGATGAAGACTTCATTGGGTTTTACAGTGGCTTTCTGATTTTTGGTAGTCCATTGAAGAAGGGAGTTTGAAAG
TTGTTGTATACTGTTAACGATTGTCTGCCCATGTCCTGCCCAAAATACCATGATTCTTTATGGAAATTATCTTTAATAAAGCTGGATACAGTTTGGCTTG
GG
  • refseq_C15orf21.F1 (forward primer)
  • refseq_C15orf21.R1 (reverse primer)
  • Exon skipping and alternative donor or acceptor

Frame 0

T*AMKSKGESFGW*F***PQSKQAVW*P*KPTG
HNHSENLRLAATGGYKMSLDLLQCPIPRELSLFD
LLVVP*RTCKDVFI*LDT*SLPCMNSPHLPMLV
KNQRQLTLRLPEGTPDVTPVT*KWKRSELSKRE
ASHIQAGPPWSEPC*SHQGPR*VWKC*LQRYAFT
SLATKKNRNAQSRAV*RRRGDDP*TDQSPCSTA
QCLCPTTVAATLPERKAEGDAKGDKTKVK*ELQ
RRSTRLSAKPAPPKPQPKPRKASAKKREKVPTEK
KGKADAGKEGNNPAENGDAKTD*AQKAKGAGDA
K*SVCIFDNCVLLVTVQFEILFFNQVL*KCRFC
LAFFFFFKLC*YTEYFIVVLGRRAICH**KAPEA
GLMWGKHLFLLVLRDFLLGPRKRDSLTLIHMAT
LV*KPCGMEKQIRFLCPLLCFYLSEWT*IP*TQ
TSSGT*PPIIGYQCVRQSGLCPQKSSGSCF*VVD
LQINSVIFLSLPESQGRFMKSYETAC*M*NVNP
H*TLPVQSIR*RLHWVLQWLSDFW*SIEEGSLK
VVVYC*RLSAHVLPKIP*FFMEIIFNKAGYSLAW

Frame 1

PKR*NPKVNLLVGDFDDSHKASRLYGSLENQQA
TITVKTSGWQPLEDTK*VWISFNAPFPENCHYL
TCW*FPKGRARMFLFDWTLEACPV*TAPIFPCLS
KIRGN*HCGFLRELRM*LLLHENGRGQSCPRGR
PATSRQGPHGQNPARAIKVPDESGSVSCKDMHL
LLWLQKRIEMHKAEQCEEEEAMTPRPTKARAPLP
SAYVPPLSLPPCPRERLKGMLKEIKPRLSRNCR
EDPQGCLLNLLLQSHSRSPERPLQRRERRYLQR
RREKLMLARRGITLQKMEMPKQTRHRKLKVLEMP
SEVCAFLITVYFW*LYSLKYYFLIKFYKNADFV
*LFFFFLSYVSTQNTSLLFWGEGPYVTNRKPLK
LD*CGENTFSFWF*ETSSWVPGRGIP*L*YTWPP
WYKSLVVWKNKFVFYVLFSVSTFQNGLKSLKPR
HLLGPDPQ*LVTSVSGNLDFALKRAVVPVSRLW
IFR*ILSFSFHFLKARVGS*KAMKQHAKCEMSTL
TKLCRFRASDEDFIGFYSGFLIFGSPLKKGV*K
LLYTVNDCLPMSCPKYHDSLWKLSLIKLDTVWL
G

Frame 2

LSDEIQR*IFWLVILMIATKQAGCMVALKTNRP
QSQ*KPQVGSHWRIQNEFGSPSMPHSQRTVII*
PAGSSLKDVQGCFYLTGHLKLALYEQPPSSHAC
QKSEATNTAAS*GNSGCDSCYMKMEEVRVVQEGG
QPHPGRAPMVRTLLEPSRSQMSLEVLVAKICIY
FSGYKKE*KCTKQSSVKKKRR*PLDRPKPVLHC
PVPMSHHCRCHPAREKG*RGC*RR*NQG*VGTAE
KIHKVVC*TCSSKATAEAQKGLCKEEREGTYRE
EGKS*CWQGGE*PCRKWRCQNRLGTES*RCWRC
QVKCVHF**LCTSGDCTV*NTIF*SSFIKMQILF
SFFFFF*AMLVHRILHCCFGEKGHMSLIESP*S
WTDVGKTPFPSGFERLPLGSQEEGFPDFDTHGH
LGIKALWYGKTNSFFMSSSLFLPFRMDLNPLNPD
IFWDLTPNNWLPVCQAIWTLPSKEQWFLFLGCG
SSDKFCHFPFTS*KPGSVHEKL*NSMLNVKCQP
SLNFAGSEHQMKTSLGFTVAF*FLVVH*RREFES
CCILLTIVCPCPAQNTMILYGNYL**SWIQFGL

Sequence NM_001005266

ACCTAAGCGATGAAATCCAAAGGTGAATCTTTTGGTTGGTGATTTTGATGATAGCCACAAAGCAAGCAGGCTGTATGGTAGCCTTGAAAACCAACAGGCC
ACAATCACAGTGAAAACCTCAGGTTGGCAGCCACTGGAGGATACAAAATGAGTTTGGATCTCCTTCAATGCCCCATTCCCAGAGAACTGTCATTATTTGA
CCTGCTGGTAGTTCCCTAAAGGACGTGCAAGGATGTTTTTATTTGACTGGACACTTGAAGCTTGCCCTGTATGAACAGCCCCCATCTTCCCATGCTTGTC
AAAAATCAGAGGCAACTAACACTGCGGCTTCCTGAGAGTCTCACTCTGTCACCCAGGCTGGAGAGCAATTGCACAAACACTTGGCTCACTGCAGCCTCAA
CTTCTTGTCCTCAAGTGATCCTCCCACCTTAGCCTCCTAAGTAGCTGGGACCACAGGGAACTCCGGATGTGACTCCTGTTACATGAAAATGGAAGAGGTC
AGAGTTGTCCAAGAGGGAGGCCAGCCACATCCAGGCAGGGCCCCCATGGTCAGAACCCTGCTAGAGCCATCAAGGTCCCAGAGCTCCCAAGATGGTGGCA
AGCCTTTTGTTCTCTGACCAGAGGTTCCTGGCCTCACGGATTCCAAGGAATGGAACCTTGGGCCATGCGTGCACTTGATTTTGCAGATGAGTCTGGAAGT
GTTAGTTGCAAAGATATGCATTTACTTCTCTGGCTACAAAAAAGAATAGAAATGCACAAAGCAGAGCAGTGTGAAGAAGAAGAGGCGATGACCCCTAGAC
CGACCAAAGCCCGTGCTCCACTGCCCAGTGCCTATGTCCCACCACTGTCGCTGCCACCCTGCCCGAGAGAAAGGCTGAAGGGGATGCTAAAGGAGATAAA
ACCAAGGTTAAGTAGGAACTGCAGAGAAGATCCACAAGGTTGTCTGCTAAACCTGCTCCTCCAAAGCCACAGCCGAAGCCCAGAAAGGCCTCTGCAAAGA
AGAGAGAGAAGGTACCTACAGAGAAGAAGGGAAAAGCTGATGCTGGCAAGGAGGGGAATAACCCTGCAGAAAATGGAGATGCCAAAACAGACTAGGCACA
GAAAGCTAAAGGTGCTGGAGATGCCAAGTGAAGTGTGTGCATTTTTGATAACTGTGTACTTCTGGTGACTGTACAGTTTGAAATACTATTTTTTAATCAA
GTTTTATAAAAATGCAGATTTTGTTTAGCTTTTTTTTTTTTTTTTAAGCTATGTTAGTACACAGAATACTTCATTGTTGTTTTGGGGAGAAGGGCCATAT
GTCACTAATAGAAAGCCCCTGAAGCTGGACTGATGTGGGGAAAACACCTTTTCCTTCTGGTTTTGAGAGACTTCCTCTTGGGTCCCAGGAAGAGGGATTC
CCTGACTTTGATACACATGGCCACCTTGGTATAAAAGCCTTGTGGTATGGAAAAACAAATTCGTTTTTTATGTCCTCTTCTCTGTTTCTACCTTTCAGAA
TGGACTTAAATCCCTTAAACCCAGACATCTTCTGGGACCTGACCCCCAATAATTGGTTACCAGTGTGTCAGGCAATCTGGACTTTGCCCTCAAAAGAGCA
GTGGTTCCTGTTTCTAGGTTGTGGATCTTCAGATAAATTCTGTCATTTTCCTTTCACTTCCTGAAAGCCAGGGTCGGTTCATGAAAAGCTATGAAACAGC
ATGCTAAATGTGAAATGTCAACCCTCACTAAACTTTGCCGGTTCAGAGCATCAGATGAAGACTTCATTGGGTTTTACAGTGGCTTTCTGATTTTTGGTAG
TCCATTGAAGAAGGGAGTTTGAAAGTTGTTGTATACTGTTAACGATTGTCTGCCCATGTCCTGCCCAAAATACCATGATTCTTTATGGAAATTATCTTTA
ATAAAGCTGGATACAGTTTGGCTTGGG
  • refseq_C15orf21.F1 (forward primer)
  • refseq_C15orf21.R1 (reverse primer)
  • Exon skipping and alternative donor or acceptor

Frame 0

T*AMKSKGESFGW*F***PQSKQAVW*P*KPTG
HNHSENLRLAATGGYKMSLDLLQCPIPRELSLFD
LLVVP*RTCKDVFI*LDT*SLPCMNSPHLPMLV
KNQRQLTLRLPESLTLSPRLESNCTNTWLTAAS
TSCPQVILPP*PPK*LGPQGTPDVTPVT*KWKRS
ELSKREASHIQAGPPWSEPC*SHQGPRAPKMVA
SLLFSDQRFLASRIPRNGTLGHACT*FCR*VWK
C*LQRYAFTSLATKKNRNAQSRAV*RRRGDDP*T
DQSPCSTAQCLCPTTVAATLPERKAEGDAKGDK
TKVK*ELQRRSTRLSAKPAPPKPQPKPRKASAK
KREKVPTEKKGKADAGKEGNNPAENGDAKTD*AQ
KAKGAGDAK*SVCIFDNCVLLVTVQFEILFFNQ
VL*KCRFCLAFFFFFKLC*YTEYFIVVLGRRAI
CH**KAPEAGLMWGKHLFLLVLRDFLLGPRKRDS
LTLIHMATLV*KPCGMEKQIRFLCPLLCFYLSE
WT*IP*TQTSSGT*PPIIGYQCVRQSGLCPQKS
SGSCF*VVDLQINSVIFLSLPESQGRFMKSYETA
C*M*NVNPH*TLPVQSIR*RLHWVLQWLSDFW*
SIEEGSLKVVVYC*RLSAHVLPKIP*FFMEIIF
NKAGYSLAW

Frame 1

PKR*NPKVNLLVGDFDDSHKASRLYGSLENQQA
TITVKTSGWQPLEDTK*VWISFNAPFPENCHYL
TCW*FPKGRARMFLFDWTLEACPV*TAPIFPCLS
KIRGN*HCGFLRVSLCHPGWRAIAQTLGSLQPQ
LLVLK*SSHLSLLSSWDHRELRM*LLLHENGRG
QSCPRGRPATSRQGPHGQNPARAIKVPELPRWWQ
AFCSLTRGSWPHGFQGMEPWAMRALDFADESGS
VSCKDMHLLLWLQKRIEMHKAEQCEEEEAMTPR
PTKARAPLPSAYVPPLSLPPCPRERLKGMLKEIK
PRLSRNCREDPQGCLLNLLLQSHSRSPERPLQR
RERRYLQRRREKLMLARRGITLQKMEMPKQTRH
RKLKVLEMPSEVCAFLITVYFW*LYSLKYYFLIK
FYKNADFV*LFFFFLSYVSTQNTSLLFWGEGPY
VTNRKPLKLD*CGENTFSFWF*ETSSWVPGRGI
P*L*YTWPPWYKSLVVWKNKFVFYVLFSVSTFQN
GLKSLKPRHLLGPDPQ*LVTSVSGNLDFALKRA
VVPVSRLWIFR*ILSFSFHFLKARVGS*KAMKQ
HAKCEMSTLTKLCRFRASDEDFIGFYSGFLIFGS
PLKKGV*KLLYTVNDCLPMSCPKYHDSLWKLSL
IKLDTVWLG

Frame 2

LSDEIQR*IFWLVILMIATKQAGCMVALKTNRP
QSQ*KPQVGSHWRIQNEFGSPSMPHSQRTVII*
PAGSSLKDVQGCFYLTGHLKLALYEQPPSSHAC
QKSEATNTAAS*ESHSVTQAGEQLHKHLAHCSLN
FLSSSDPPTLAS*VAGTTGNSGCDSCYMKMEEV
RVVQEGGQPHPGRAPMVRTLLEPSRSQSSQDGG
KPFVL*PEVPGLTDSKEWNLGPCVHLILQMSLEV
LVAKICIYFSGYKKE*KCTKQSSVKKKRR*PLD
RPKPVLHCPVPMSHHCRCHPAREKG*RGC*RR*
NQG*VGTAEKIHKVVC*TCSSKATAEAQKGLCKE
EREGTYREEGKS*CWQGGE*PCRKWRCQNRLGT
ES*RCWRCQVKCVHF**LCTSGDCTV*NTIF*S
SFIKMQILFSFFFFF*AMLVHRILHCCFGEKGHM
SLIESP*SWTDVGKTPFPSGFERLPLGSQEEGF
PDFDTHGHLGIKALWYGKTNSFFMSSSLFLPFR
MDLNPLNPDIFWDLTPNNWLPVCQAIWTLPSKEQ
WFLFLGCGSSDKFCHFPFTS*KPGSVHEKL*NS
MLNVKCQPSLNFAGSEHQMKTSLGFTVAF*FLV
VH*RREFESCCILLTIVCPCPAQNTMILYGNYL*
*SWIQFGL

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