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Sequences

Sequence NM_052987

GTCTGCGCCTGCGCGCAAGAGAGGCGGGGCCAGCGCTCGGCATGGCGGAGCCAGATCTGGAGTGCGAGCAGATCCGTCTGAAGTGTATTCCTGGGACGAT GCCGGAGTGTGAAGGAGTTTGAGAAGCTGAACCGCATTGGAGAGGGTACCTACGGCATTGTGTATCGGGCCCGGGACACCCAGACAGATGAGATTGTCGC ACTGAAGAAGGTGCGGATGGACAAGGAGAAGGATGGCATCCCCATCAGCAGCTTGCGGGAGATCACGCTGCTGCTCCGCCTGCGTCATCCGAACATCGTG GAGCTGAAGGAGGTGGTTGTGGGGAACCACCTGGAGAGCATCTTCCTGGTGATGGGTTACTGTGAGCAGGACCTGGCCAGCCTCCTGGAGAATATGCCAA CACCCTTCTCGGAGGCTCAGGTCAAGTGCATCGTGCTGCAGGTGCTCCGGGGCCTCCAGTATCTGCACAGGAACTTCATTATCCACAGGGACCTGAAGGT TTCCAACTTGCTCATGACCGACAAGGGTTGTGTGAAGACAGCGGATTTCGGCCTGGCCCGGGCCTATGGTGTCCCAGTAAAGCCAATGACCCCCAAGGTG GTCACTCTCTGGTACCGAGCCCCTGAACTGCTGTTGGGAACCACCACGCAGACCACCAGCATCGACATGTGGGCTGTGGGCTGCATACTGGCCGAGCTGC TGGCGCACAGGCCTCTTCTCCCCGGCACTTCCGAGATCCACCAGATCGACTTGATCGTGCAGCTGCTGGGCACGCCCAGTGAGAACATCTGGCCGGGCTT TTCCAAGCTGCCACTGGTCGGCCAGTACAGCCTCCGGAAGCAGCCCTACAACAACCTGAAGCACAAGTTCCCATGGCTGTCGGAGGCCGGGCTGCGCCTG CTGCACTTCCTGTTCATGTACGACCCTAAGAAAAGGGCGACGGCCGGGGACTGCCTGGAGAGCTCCTATTTCAAGGAGAAGCCCCTACGTCTTCCGATCA GTGGTGTCTGTGAAGGGTGCCGCGAGCCAGGCTGACCAGGCGCCCGGGATCCAGCTCATCCCCTTGGCTGGGAACATCCTCCACTGACTTCCTCCCACTG TCTGCCCTGAACCCACTGCTGCCCCCAGAAAAAGGCCGGGTGACACCGGGGGGCTCCCAGCCCGTGCACCCTGGAAGGGCAGGTCTGGCGGCTCCATCCG TGGCTGCAGGGGTCTCATGTGGTCCTCCTCGCTATGTTGGAAATGTGCAACCACTGCTTCTTGGGAGGAGTGGTGGGTGCAGTCCCCCCGCTGTCTTTGA GTTGTGGTGGACGCTGGCCTGGGATGAGAGGGCCCAGAAGACCTTCGTATCCCCTCTCAGTCGCCCGGGGCTGTCCCGTGCATGGGTTGGCTGTGGGGAC CCCAGGTGGGCCTGGCAGGACTCCAGATGAGGACAAGAGGGACAAGGTATGGGGTGGGAGCCACAATTGAGGATACCCCGAGACTACCAGGAGAGCCCTG GGCTGGAGGCTGAGCTGCATCCCTGCTCCCCACATGGAGGACCCAACAGGAGGCCGTGGCTCTGATGCTGAGCGAAGCTATAGGCTCTTGTTGGATAAAA GCTTTTTTAACAGA

refseq_CDK10.F1 (forward primer)
refseq_CDK10.R1 (reverse primer)
Exon skipping and alternative donor or acceptor

Frame 0

VCACAQERRGQRSAWRSQIWSASRSV*SVFLGR CRSVKEFEKLNRIGEGTYGIVYRARDTQTDEIVA LKKVRMDKEKDGIPISSLREITLLLRLRHPNIV ELKEVVVGNHLESIFLVMGYCEQDLASLLENMP TPFSEAQVKCIVLQVLRGLQYLHRNFIIHRDLKV SNLLMTDKGCVKTADFGLARAYGVPVKPMTPKV VTLWYRAPELLLGTTTQTTSIDMWAVGCILAEL LAHRPLLPGTSEIHQIDLIVQLLGTPSENIWPGF SKLPLVGQYSLRKQPYNNLKHKFPWLSEAGLRL LHFLFMYDPKKRATAGDCLESSYFKEKPLRLPI SGVCEGCREPG*PGARDPAHPLGWEHPPLTSSHC LP*THCCPQKKAG*HRGAPSPCTLEGQVWRLHP WLQGSHVVLLAMLEMCNHCFLGGVVGAVPPLSL SCGGRWPGMRGPRRPSYPLSVARGCPVHGLAVGT PGGPGRTPDEDKRDKVWGGSHN*GYPETTRRAL GWRLSCIPAPHMEDPTGGRGSDAERSYRLLLDK SFFNR

Frame 1

SAPARKRGGASARHGGARSGVRADPSEVYSWDD AGV*RSLRS*TALERVPTALCIGPGTPRQMRLS H*RRCGWTRRRMASPSAACGRSRCCSACVIRTSW S*RRWLWGTTWRASSW*WVTVSRTWPASWRICQ HPSRRLRSSASCCRCSGASSICTGTSLSTGT*R FPTCS*PTRVV*RQRISAWPGPMVSQ*SQ*PPRW SLSGTEPLNCCWEPPRRPPASTCGLWAAYWPSC WRTGLFSPALPRSTRST*SCSCWARPVRTSGRA FPSCHWSASTASGSSPTTT*STSSHGCRRPGCAC CTSCSCTTLRKGRRPGTAWRAPISRRSPYVFRS VVSVKGAASQADQAPGIQLIPLAGNILH*LPPT VCPEPTAAPRKRPGDTGGLPARAPWKGRSGGSIR GCRGLMWSSSLCWKCATTASWEEWWVQSPRCL* VVVDAGLG*EGPEDLRIPSQSPGAVPCMGWLWG PQVGLAGLQMRTRGTRYGVGATIEDTPRLPGEPW AGG*AASLLPTWRTQQEAVALMLSEAIGSCWIK AFLT

Frame 2

LRLRAREAGPALGMAEPDLECEQIRLKCIPGTM PECEGV*EAEPHWRGYLRHCVSGPGHPDR*DCR TEEGADGQGEGWHPHQQLAGDHAAAPPASSEHR GAEGGGCGEPPGEHLPGDGLL*AGPGQPPGEYAN TLLGGSGQVHRAAGAPGPPVSAQELHYPQGPEG FQLAHDRQGLCEDSGFRPGPGLWCPSKANDPQG GHSLVPSP*TAVGNHHADHQHRHVGCGLHTGRAA GAQASSPRHFRDPPDRLDRAAAGHAQ*EHLAGL FQAATGRPVQPPEAALQQPEAQVPMAVGGRAAP AALPVHVRP*EKGDGRGLPGELLFQGEAPTSSDQ WCL*RVPRARLTRRPGSSSSPWLGTSSTDFLPL SALNPLLPPEKGRVTPGGSQPVHPGRAGLAAPS VAAGVSCGPPRYVGNVQPLLLGRSGGCSPPAVFE LWWTLAWDERAQKTFVSPLSRPGLSRAWVGCGD PRWAWQDSR*GQEGQGMGWEPQLRIPRDYQESP GLEAELHPCSPHGGPNRRPWL*C*AKL*ALVG*K LF*Q

Sequence NM_003674

GTCTGCGCCTGCGCGCAAGAGAGGCGGGGCCAGCGCTCGGCATGGCGGAGCCAGATCTGGAGTGCGAGCAGATCCGTCTGAAGTGTATTCGTAAGGAGGG CTTCTTCACGGTGCCTCCGGAACACAGGGCGTGAGCCACCGCCCCCAGCCTGGCCTGGCATTTCTTTGAGTTCAGGAAGTGTGACAAGGATTTGGACACC CAGAAATAAGCGTGTCGAGAAGAGCACAAGCAGAGGATCTGGGACGATGCCGGAGTGTGAAGGAGTTTGAGAAGCTGAACCGCATTGGAGAGGGTACCTA CGGCATTGTGTATCGGGCCCGGGACACCCAGACAGATGAGATTGTCGCACTGAAGAAGGTGCGGATGGACAAGGAGAAGGATGGCATCCCCATCAGCAGC TTGCGGGAGATCACGCTGCTGCTCCGCCTGCGTCATCCGAACATCGTGGAGCTGAAGGAGGTGGTTGTGGGGAACCACCTGGAGAGCATCTTCCTGGTGA TGGGTTACTGTGAGCAGGACCTGGCCAGCCTCCTGGAGAATATGCCAACACCCTTCTCGGAGGCTCAGGTCAAGTGCATCGTGCTGCAGGTGCTCCGGGG CCTCCAGTATCTGCACAGGAACTTCATTATCCACAGGGACCTGAAGGTTTCCAACTTGCTCATGACCGACAAGGGTTGTGTGAAGACAGCGGATTTCGGC CTGGCCCGGGCCTATGGTGTCCCAGTAAAGCCAATGACCCCCAAGGTGGTCACTCTCTGGTACCGAGCCCCTGAACTGCTGTTGGGAACCACCACGCAGA CCACCAGCATCGACATGTGGGCTGTGGGCTGCATACTGGCCGAGCTGCTGGCGCACAGGCCTCTTCTCCCCGGCACTTCCGAGATCCACCAGATCGACTT GATCGTGCAGCTGCTGGGCACGCCCAGTGAGAACATCTGGCCGGGCTTTTCCAAGCTGCCACTGGTCGGCCAGTACAGCCTCCGGAAGCAGCCCTACAAC AACCTGAAGCACAAGTTCCCATGGCTGTCGGAGGCCGGGCTGCGCCTGCTGCACTTCCTGTTCATGTACGACCCTAAGAAAAGGGCGACGGCCGGGGACT GCCTGGAGAGCTCCTATTTCAAGGAGAAGCCCCTACCCTGTGAGCCGGAGCTCATGCCGACCTTTCCCCACCACCGCAACAAGCGGGCCGCCCCAGCCAC CTCCGAGGGCCAGAGCAAGCGCTGTAAACCCTGACGGTGGGCCTGGCACACGCCTGTATTCCCACACCAGGTCTTCCGATCAGTGGTGTCTGTGAAGGGT GCCGCGAGCCAGGCTGACCAGGCGCCCGGGATCCAGCTCATCCCCTTGGCTGGGAACATCCTCCACTGACTTCCTCCCACTGTCTGCCCTGAACCCACTG CTGCCCCCAGAAAAAGGCCGGGTGACACCGGGGGGCTCCCAGCCCGTGCACCCTGGAAGGGCAGGTCTGGCGGCTCCATCCGTGGCTGCAGGGGTCTCAT GTGGTCCTCCTCGCTATGTTGGAAATGTGCAACCACTGCTTCTTGGGAGGAGTGGTGGGTGCAGTCCCCCCGCTGTCTTTGAGTTGTGGTGGACGCTGGC CTGGGATGAGAGGGCCCAGAAGACCTTCGTATCCCCTCTCAGTCGCCCGGGGCTGTCCCGTGCATGGGTTGGCTGTGGGGACCCCAGGTGGGCCTGGCAG GACTCCAGATGAGGACAAGAGGGACAAGGTATGGGGTGGGAGCCACAATTGAGGATACCCCGAGACTACCAGGAGAGCCCTGGGCTGGAGGCTGAGCTGC ATCCCTGCTCCCCACATGGAGGACCCAACAGGAGGCCGTGGCTCTGATGCTGAGCGAAGCTATAGGCTCTTGTTGGATAAAAGCTTTTTTAACAGA

refseq_CDK10.F1 (forward primer)
refseq_CDK10.R1 (reverse primer)
Exon skipping and alternative donor or acceptor

Frame 0

VCACAQERRGQRSAWRSQIWSASRSV*SVFVRR ASSRCLRNTGREPPPPAWPGISLSSGSVTRIWTP RNKRVEKSTSRGSGTMPECEGV*EAEPHWRGYL RHCVSGPGHPDR*DCRTEEGADGQGEGWHPHQQ LAGDHAAAPPASSEHRGAEGGGCGEPPGEHLPGD GLL*AGPGQPPGEYANTLLGGSGQVHRAAGAPG PPVSAQELHYPQGPEGFQLAHDRQGLCEDSGFR PGPGLWCPSKANDPQGGHSLVPSP*TAVGNHHAD HQHRHVGCGLHTGRAAGAQASSPRHFRDPPDRL DRAAAGHAQ*EHLAGLFQAATGRPVQPPEAALQ QPEAQVPMAVGGRAAPAALPVHVRP*EKGDGRGL PGELLFQGEAPTL*AGAHADLSPPPQQAGRPSH LRGPEQAL*TLTVGLAHACIPTPGLPISGVCEG CREPG*PGARDPAHPLGWEHPPLTSSHCLP*THC CPQKKAG*HRGAPSPCTLEGQVWRLHPWLQGSH VVLLAMLEMCNHCFLGGVVGAVPPLSLSCGGRW PGMRGPRRPSYPLSVARGCPVHGLAVGTPGGPGR TPDEDKRDKVWGGSHN*GYPETTRRALGWRLSC IPAPHMEDPTGGRGSDAERSYRLLLDKSFFNR

Frame 1

SAPARKRGGASARHGGARSGVRADPSEVYS*GG LLHGASGTQGVSHRPQPGLAFL*VQEV*QGFGH PEISVSRRAQAEDLGRCRSVKEFEKLNRIGEGTY GIVYRARDTQTDEIVALKKVRMDKEKDGIPISS LREITLLLRLRHPNIVELKEVVVGNHLESIFLV MGYCEQDLASLLENMPTPFSEAQVKCIVLQVLRG LQYLHRNFIIHRDLKVSNLLMTDKGCVKTADFG LARAYGVPVKPMTPKVVTLWYRAPELLLGTTTQ TTSIDMWAVGCILAELLAHRPLLPGTSEIHQIDL IVQLLGTPSENIWPGFSKLPLVGQYSLRKQPYN NLKHKFPWLSEAGLRLLHFLFMYDPKKRATAGD CLESSYFKEKPLPCEPELMPTFPHHRNKRAAPAT SEGQSKRCKP*RWAWHTPVFPHQVFRSVVSVKG AASQADQAPGIQLIPLAGNILH*LPPTVCPEPT AAPRKRPGDTGGLPARAPWKGRSGGSIRGCRGLM WSSSLCWKCATTASWEEWWVQSPRCL*VVVDAG LG*EGPEDLRIPSQSPGAVPCMGWLWGPQVGLA GLQMRTRGTRYGVGATIEDTPRLPGEPWAGG*AA SLLPTWRTQQEAVALMLSEAIGSCWIKAFLT

Frame 2

LRLRAREAGPALGMAEPDLECEQIRLKCIRKEG FFTVPPEHRA*ATAPSLAWHFFEFRKCDKDLDT QK*ACREEHKQRIWDDAGV*RSLRS*TALERVP TALCIGPGTPRQMRLSH*RRCGWTRRRMASPSAA CGRSRCCSACVIRTSWS*RRWLWGTTWRASSW* WVTVSRTWPASWRICQHPSRRLRSSASCCRCSG ASSICTGTSLSTGT*RFPTCS*PTRVV*RQRISA WPGPMVSQ*SQ*PPRWSLSGTEPLNCCWEPPRR PPASTCGLWAAYWPSCWRTGLFSPALPRSTRST *SCSCWARPVRTSGRAFPSCHWSASTASGSSPTT T*STSSHGCRRPGCACCTSCSCTTLRKGRRPGT AWRAPISRRSPYPVSRSSCRPFPTTATSGPPQP PPRARASAVNPDGGPGTRLYSHTRSSDQWCL*RV PRARLTRRPGSSSSPWLGTSSTDFLPLSALNPL LPPEKGRVTPGGSQPVHPGRAGLAAPSVAAGVS CGPPRYVGNVQPLLLGRSGGCSPPAVFELWWTLA WDERAQKTFVSPLSRPGLSRAWVGCGDPRWAWQ DSR*GQEGQGMGWEPQLRIPRDYQESPGLEAEL HPCSPHGGPNRRPWL*C*AKL*ALVG*KLF*Q