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Sequences

Sequence NM_001039506

GGCCGCGAGATGGGGAAGATGGCAGCGGCCGTGGGCTCTGTGGCGACTCTGGCGACTGAGCCCGGGGAGGACGCCTTTCGGAAACTTTTCCGCTTCTACC
GTCAGAGCCGGCCCGGGACCGCAGACCTGGAAGGGGTCATCGACTTCTCGGCGGCCCACGCAGCCCGTGGCAAGGGTCCTGGTGCCCAAAAGGTGATCAA
ATCTCAGCTAAATGTGTCTTCTGTCAGTGAGCAGAATGCATATAGAGCAGGTCTTCAGCCCGTCAGCAAGTGGCAAGCCTATGGACTCAAAGGCTATCCT
GGTATAAAGAAGCGACTAAACGGAGACCCCGAAGTTTACTGGAGAAACTGCGTTGGGTGACCGTAGGCTACCATTATAACTGGGACAGTAAGAAATACTC
AGCAGATCATTACACACCTTTCCCTTCTGACCTGGGTTTCCTCTCAGAGCAAGTAGCCGCTGCCTGTGGATTTGAGGATTTCCGAGCTGAAGCAGGGATC
CTGAATTACTACCGCCTGGACTCCACACTGGGAATCCACGTAGACAGATCTGAGCTAGATCACTCCAAACCCTTGCTGTCATTCAGCTTTGGACAGTCCG
CCATCTTTCTCCTGGGTGGTCTTCAAAGGGATGAGGCCCCCACGGCCATGTTTATGCACAGTGGTGACATCATGATAATGTCGGGTTTCAGCCGCCTCTT
GAACCACGCAGTCCCTCGTGTCCTTCCAAATCCAGAAGGGGAAGGCCTGCCTCACTGCCTAGAGGCACCTCTCCCTGCTGTCCTCCCGAGAGATTCAATG
GTAGAGCCTTGTTCTATGGAGGACTGGCAGGTGTGTGCCAGCTACTTGAAGACCGCTCGTGTTAACATGACTGTCCGACAGGTCCTGGCCACAGACCAGA
ATTTCCCTCTAGAACCCATCGAGGATGAAAAAAGAGACATCAGTACAGAAGGTTTCTGCCATCTGGATGACCAGAATAGCGAAGTAAAACGGGCCAGGAT
AAACCCTGACAGCTGAGACTTGGAGATCCCATCCTTTTTACTCAGGCACCTGCTTACCGTAAATGATCATGTTATTGTGTATTGCCGTGGACTTCAGCAC
CCAGACAAGCCAAAAACAGAGACAGGGAAGAACTCATTGTTGATCACACTGTTGCCTTGGAACCCACGCAGAAGTAAACTCAGCCACTTTGCTCAGAGAA
GTGTTTGACATGGTCTGTTCCTAGTTACATGTTGGCTGTAATGTATGTTGAGAAGTCAGTCCAAGGAGGTATGTTCTTCCACAACAGCCTTCTCAGCCTC
TGCTATTTCCTTTGAGGAAGGTAGAAGTGAGTTTCCATGTTTGCAGAGTATTTAAATACCTCAGATTTTATTAATGAGAAATACAGTACCCCTCCCTCCA
CTCCATCTGGTAATTTATGGTAAAATTGTGGTTCTGTGAACCAGCTATTAGTCTCATCTTCTTAACTCCCTCAGGCATCATCAAATTCTTTGATCTTCTC
TTCCACCTCTCTGGCTCTCATGGAAGAATCCTTTACACATGAAAACAATGGAACTGGAAAATCTTGTCTTTTAGAAAAGAAATTAATCACAACTATCTCT
CTTGCCTAAAAGATAAATATAGGTAAACCCAAGGAAAGGGGAATTTAGTTTCTCTACATGTCATTTCGGTCTCCAAACTCCCTGTTGGCTTTTTAATGCA
ATTTTAATTGTTGGAATAAAAAAGTCCCAAGGGTGTTTTGTTACTGTTTTCTCCATGAATAAACTCACTTGATTTTAAATTAAAGATCTATATCTGTCTT
TGGGGTTTAGTCTATCTGGGATTAAGGTTTTTTTTTCTGTTTTTCTTTGCTGTATTGTTCATGCTATTGAAGCCCTCTAGCTGTTTCTGCCCTACACCAT
TCTGCTGTGCCCTAAGTATTCTTTGTGGCTGTCTCACAGAAGAGAGAACATTTCTTAATATTCCAGTCACTGCTGTTATTGTCTGAGGGTAGGCAGCTTG
GAAAAATGTAGGCAACACCAAGTTTTAATCTTTATACCCCCAACAATTTGACTGACTATATCATGGTCCAGGTTACTTTACATTTCTCTGGACCTCGGTT
TCCTCATCATAAAATGAAGATACTGTAGACTACCATCTTCCTAAAGGGATATTGGTATTTGAAAGAGAATTAAGTGCTCCTTTCTACAAACATGATGTGC
CAAAATTGTTTTATTATAAGGGCTCTTTGAAACATCCTAACTTCCTTGTGTGGAGGACTGGCTGGAAGCCCATTTGGTACCTACTGTTTGCAATGCATGT
TATTAAGTTTACATGTCTCCTCTGTCCTGCTCTGCCCCTTTTTTAAATTACTGGCATTGAATATTGAGTTCATATGGTAATAGCAGGGTTTTTAAATGAA
TAAAAATTATGGATTTATCTCT
  • refseq_ALKBH1.F2 (forward primer)
  • refseq_ALKBH1.R2 (reverse primer)
  • Single exon skipping

Frame 0

GREMGKMAAAVGSVATLATEPGEDAFRKLFRFY
RQSRPGTADLEGVIDFSAAHAARGKGPGAQKVIK
SQLNVSSVSEQNAYRAGLQPVSKWQAYGLKGYP
GIKKRLNGDPEVYWRNCVG*P*ATIITGTVRNT
QQIITHLSLLTWVSSQSK*PLPVDLRISELKQGS
*ITTAWTPHWEST*TDLS*ITPNPCCHSALDSP
PSFSWVVFKGMRPPRPCLCTVVTS**CRVSAAS
*TTQSLVSFQIQKGKACLTA*RHLSLLSSREIQW
*SLVLWRTGRCVPAT*RPLVLT*LSDRSWPQTR
ISL*NPSRMKKETSVQKVSAIWMTRIAK*NGPG
*TLTAETWRSHPFYSGTCLP*MIMLLCIAVDFST
QTSQKQRQGRTHC*SHCCLGTHAEVNSATLLRE
VFDMVCS*LHVGCNVC*EVSPRRYVLPQQPSQP
LLFPLRKVEVSFHVCRVFKYLRFY**EIQYPSLH
SIW*FMVKLWFCEPAISLIFLTPSGIIKFFDLL
FHLSGSHGRILYT*KQWNWKILSFRKEINHNYL
SCLKDKYR*TQGKGNLVSLHVISVSKLPVGFLMQ
F*LLE*KSPKGVLLLFSP*INSLDFKLKIYICL
WGLVYLGLRFFFLFFFAVLFMLLKPSSCFCPTP
FCCALSILCGCLTEERTFLNIPVTAVIV*G*AAW
KNVGNTKF*SLYPQQFD*LYHGPGYFTFLWTSV
SSS*NEDTVDYHLPKGILVFERELSAPFYKHDV
PKLFYYKGSLKHPNFLVWRTGWKPIWYLLFAMHV
IKFTCLLCPALPLF*ITGIEY*VHMVIAGFLNE
*KLWIYL

Frame 1

AARWGRWQRPWALWRLWRLSPGRTPFGNFSAST
VRAGPGPQTWKGSSTSRRPTQPVARVLVPKR*S
NLS*MCLLSVSRMHIEQVFSPSASGKPMDSKAIL
V*RSD*TETPKFTGETALGDRRLPL*LGQ*EIL
SRSLHTFPF*PGFPLRASSRCLWI*GFPS*SRD
PELLPPGLHTGNPRRQI*ARSLQTLAVIQLWTVR
HLSPGWSSKG*GPHGHVYAQW*HHDNVGFQPPL
EPRSPSCPSKSRRGRPASLPRGTSPCCPPERFN
GRALFYGGLAGVCQLLEDRSC*HDCPTGPGHRPE
FPSRTHRG*KKRHQYRRFLPSG*PE*RSKTGQD
KP*QLRLGDPILFTQAPAYRK*SCYCVLPWTSA
PRQAKNRDREELIVDHTVALEPTQK*TQPLCSEK
CLTWSVPSYMLAVMYVEKSVQGGMFFHNSLLSL
CYFL*GR*K*VSMFAEYLNTSDFINEKYSTPPS
TPSGNLW*NCGSVNQLLVSSS*LPQASSNSLIFS
STSLALMEESFTHENNGTGKSCLLEKKLITTIS
LA*KINIGKPKERGI*FLYMSFRSPNSLLAF*C
NFNCWNKKVPRVFCYCFLHE*THLILN*RSISVF
GV*SIWD*GFFFCFSLLYCSCY*SPLAVSALHH
SAVP*VFFVAVSQKREHFLIFQSLLLLSEGRQL
GKM*ATPSFNLYTPNNLTDYIMVQVTLHFSGPRF
PHHKMKIL*TTIFLKGYWYLKEN*VLLSTNMMC
QNCFIIRAL*NILTSLCGGLAGSPFGTYCLQCM
LLSLHVSSVLLCPFFKLLALNIEFIW**QGF*MN
KNYGFIS

Frame 2

PRDGEDGSGRGLCGDSGD*ARGGRLSETFPLLP
SEPARDRRPGRGHRLLGGPRSPWQGSWCPKGDQ
ISAKCVFCQ*AECI*SRSSARQQVASLWTQRLS
WYKEATKRRPRSLLEKLRWVTVGYHYNWDSKKYS
ADHYTPFPSDLGFLSEQVAAACGFEDFRAEAGI
LNYYRLDSTLGIHVDRSELDHSKPLLSFSFGQS
AIFLLGGLQRDEAPTAMFMHSGDIMIMSGFSRLL
NHAVPRVLPNPEGEGLPHCLEAPLPAVLPRDSM
VEPCSMEDWQVCASYLKTARVNMTVRQVLATDQ
NFPLEPIEDEKRDISTEGFCHLDDQNSEVKRARI
NPDS*DLEIPSFLLRHLLTVNDHVIVYCRGLQH
PDKPKTETGKNSLLITLLPWNPRRSKLSHFAQR
SV*HGLFLVTCWL*CMLRSQSKEVCSSTTAFSAS
AISFEEGRSEFPCLQSI*IPQILLMRNTVPLPP
LHLVIYGKIVVL*TSY*SHLLNSLRHHQIL*SS
LPPLWLSWKNPLHMKTMELENLVF*KRN*SQLSL
LPKR*I*VNPRKGEFSFSTCHFGLQTPCWLFNA
ILIVGIKKSQGCFVTVFSMNKLT*F*IKDLYLS
LGFSLSGIKVFFSVFLCCIVHAIEAL*LFLPYTI
LLCPKYSLWLSHRRENIS*YSSHCCYCLRVGSL
EKCRQHQVLIFIPPTI*LTISWSRLLYISLDLG
FLIIK*RYCRLPSS*RDIGI*KRIKCSFLQT*CA
KIVLL*GLFETS*LPCVEDWLEAHLVPTVCNAC
Y*VYMSPLSCSAPFLNYWH*ILSSYGNSRVFK*
IKIMDLS

Sequence NM_006020

GGCCGCGAGATGGGGAAGATGGCAGCGGCCGTGGGCTCTGTGGCGACTCTGGCGACTGAGCCCGGGGAGGACGCCTTTCGGAAACTTTTCCGCTTCTACC
GTCAGAGCCGGCCCGGGACCGCAGACCTGGAAGGGGTCATCGACTTCTCGGCGGCCCACGCAGCCCGTGGCAAGGGTCCTGGTGCCCAAAAGGTGATCAA
ATCTCAGCTAAATGTGTCTTCTGTCAGTGAGCAGAATGCATATAGAGCAGGTCTTCAGCCCGTCAGCAAGTGGCAAGCCTATGGACTCAAAGGCTATCCT
GGGTTTATTTTTATCCCAAACCCCTTCCTCCCAGGTTACCAGTGGCACTGGGTGAAACAGTGCCTTAAGTTATATTCCCAGAAACCTAATGTATGTAACC
TGGACAAACACATGTCTAAAGAAGAGACCCAAGATCTGTGGGAACAGAGCAAAGAGTTCCTGAGGTATAAAGAAGCGACTAAACGGAGACCCCGAAGTTT
ACTGGAGAAACTGCGTTGGGTGACCGTAGGCTACCATTATAACTGGGACAGTAAGAAATACTCAGCAGATCATTACACACCTTTCCCTTCTGACCTGGGT
TTCCTCTCAGAGCAAGTAGCCGCTGCCTGTGGATTTGAGGATTTCCGAGCTGAAGCAGGGATCCTGAATTACTACCGCCTGGACTCCACACTGGGAATCC
ACGTAGACAGATCTGAGCTAGATCACTCCAAACCCTTGCTGTCATTCAGCTTTGGACAGTCCGCCATCTTTCTCCTGGGTGGTCTTCAAAGGGATGAGGC
CCCCACGGCCATGTTTATGCACAGTGGTGACATCATGATAATGTCGGGTTTCAGCCGCCTCTTGAACCACGCAGTCCCTCGTGTCCTTCCAAATCCAGAA
GGGGAAGGCCTGCCTCACTGCCTAGAGGCACCTCTCCCTGCTGTCCTCCCGAGAGATTCAATGGTAGAGCCTTGTTCTATGGAGGACTGGCAGGTGTGTG
CCAGCTACTTGAAGACCGCTCGTGTTAACATGACTGTCCGACAGGTCCTGGCCACAGACCAGAATTTCCCTCTAGAACCCATCGAGGATGAAAAAAGAGA
CATCAGTACAGAAGGTTTCTGCCATCTGGATGACCAGAATAGCGAAGTAAAACGGGCCAGGATAAACCCTGACAGCTGAGACTTGGAGATCCCATCCTTT
TTACTCAGGCACCTGCTTACCGTAAATGATCATGTTATTGTGTATTGCCGTGGACTTCAGCACCCAGACAAGCCAAAAACAGAGACAGGGAAGAACTCAT
TGTTGATCACACTGTTGCCTTGGAACCCACGCAGAAGTAAACTCAGCCACTTTGCTCAGAGAAGTGTTTGACATGGTCTGTTCCTAGTTACATGTTGGCT
GTAATGTATGTTGAGAAGTCAGTCCAAGGAGGTATGTTCTTCCACAACAGCCTTCTCAGCCTCTGCTATTTCCTTTGAGGAAGGTAGAAGTGAGTTTCCA
TGTTTGCAGAGTATTTAAATACCTCAGATTTTATTAATGAGAAATACAGTACCCCTCCCTCCACTCCATCTGGTAATTTATGGTAAAATTGTGGTTCTGT
GAACCAGCTATTAGTCTCATCTTCTTAACTCCCTCAGGCATCATCAAATTCTTTGATCTTCTCTTCCACCTCTCTGGCTCTCATGGAAGAATCCTTTACA
CATGAAAACAATGGAACTGGAAAATCTTGTCTTTTAGAAAAGAAATTAATCACAACTATCTCTCTTGCCTAAAAGATAAATATAGGTAAACCCAAGGAAA
GGGGAATTTAGTTTCTCTACATGTCATTTCGGTCTCCAAACTCCCTGTTGGCTTTTTAATGCAATTTTAATTGTTGGAATAAAAAAGTCCCAAGGGTGTT
TTGTTACTGTTTTCTCCATGAATAAACTCACTTGATTTTAAATTAAAGATCTATATCTGTCTTTGGGGTTTAGTCTATCTGGGATTAAGGTTTTTTTTTC
TGTTTTTCTTTGCTGTATTGTTCATGCTATTGAAGCCCTCTAGCTGTTTCTGCCCTACACCATTCTGCTGTGCCCTAAGTATTCTTTGTGGCTGTCTCAC
AGAAGAGAGAACATTTCTTAATATTCCAGTCACTGCTGTTATTGTCTGAGGGTAGGCAGCTTGGAAAAATGTAGGCAACACCAAGTTTTAATCTTTATAC
CCCCAACAATTTGACTGACTATATCATGGTCCAGGTTACTTTACATTTCTCTGGACCTCGGTTTCCTCATCATAAAATGAAGATACTGTAGACTACCATC
TTCCTAAAGGGATATTGGTATTTGAAAGAGAATTAAGTGCTCCTTTCTACAAACATGATGTGCCAAAATTGTTTTATTATAAGGGCTCTTTGAAACATCC
TAACTTCCTTGTGTGGAGGACTGGCTGGAAGCCCATTTGGTACCTACTGTTTGCAATGCATGTTATTAAGTTTACATGTCTCCTCTGTCCTGCTCTGCCC
CTTTTTTAAATTACTGGCATTGAATATTGAGTTCATATGGTAATAGCAGGGTTTTTAAATGAATAAAAATTATGGATTTATCTCT
  • refseq_ALKBH1.F2 (forward primer)
  • refseq_ALKBH1.R2 (reverse primer)
  • Single exon skipping

Frame 0

GREMGKMAAAVGSVATLATEPGEDAFRKLFRFY
RQSRPGTADLEGVIDFSAAHAARGKGPGAQKVIK
SQLNVSSVSEQNAYRAGLQPVSKWQAYGLKGYP
GFIFIPNPFLPGYQWHWVKQCLKLYSQKPNVCN
LDKHMSKEETQDLWEQSKEFLRYKEATKRRPRSL
LEKLRWVTVGYHYNWDSKKYSADHYTPFPSDLG
FLSEQVAAACGFEDFRAEAGILNYYRLDSTLGI
HVDRSELDHSKPLLSFSFGQSAIFLLGGLQRDEA
PTAMFMHSGDIMIMSGFSRLLNHAVPRVLPNPE
GEGLPHCLEAPLPAVLPRDSMVEPCSMEDWQVC
ASYLKTARVNMTVRQVLATDQNFPLEPIEDEKRD
ISTEGFCHLDDQNSEVKRARINPDS*DLEIPSF
LLRHLLTVNDHVIVYCRGLQHPDKPKTETGKNS
LLITLLPWNPRRSKLSHFAQRSV*HGLFLVTCWL
*CMLRSQSKEVCSSTTAFSASAISFEEGRSEFP
CLQSI*IPQILLMRNTVPLPPLHLVIYGKIVVL
*TSY*SHLLNSLRHHQIL*SSLPPLWLSWKNPLH
MKTMELENLVF*KRN*SQLSLLPKR*I*VNPRK
GEFSFSTCHFGLQTPCWLFNAILIVGIKKSQGC
FVTVFSMNKLT*F*IKDLYLSLGFSLSGIKVFFS
VFLCCIVHAIEAL*LFLPYTILLCPKYSLWLSH
RRENIS*YSSHCCYCLRVGSLEKCRQHQVLIFI
PPTI*LTISWSRLLYISLDLGFLIIK*RYCRLPS
S*RDIGI*KRIKCSFLQT*CAKIVLL*GLFETS
*LPCVEDWLEAHLVPTVCNACY*VYMSPLSCSA
PFLNYWH*ILSSYGNSRVFK*IKIMDLS

Frame 1

AARWGRWQRPWALWRLWRLSPGRTPFGNFSAST
VRAGPGPQTWKGSSTSRRPTQPVARVLVPKR*S
NLS*MCLLSVSRMHIEQVFSPSASGKPMDSKAIL
GLFLSQTPSSQVTSGTG*NSALSYIPRNLMYVT
WTNTCLKKRPKICGNRAKSS*GIKKRLNGDPEV
YWRNCVG*P*ATIITGTVRNTQQIITHLSLLTWV
SSQSK*PLPVDLRISELKQGS*ITTAWTPHWES
T*TDLS*ITPNPCCHSALDSPPSFSWVVFKGMR
PPRPCLCTVVTS**CRVSAAS*TTQSLVSFQIQK
GKACLTA*RHLSLLSSREIQW*SLVLWRTGRCV
PAT*RPLVLT*LSDRSWPQTRISL*NPSRMKKE
TSVQKVSAIWMTRIAK*NGPG*TLTAETWRSHPF
YSGTCLP*MIMLLCIAVDFSTQTSQKQRQGRTH
C*SHCCLGTHAEVNSATLLREVFDMVCS*LHVG
CNVC*EVSPRRYVLPQQPSQPLLFPLRKVEVSFH
VCRVFKYLRFY**EIQYPSLHSIW*FMVKLWFC
EPAISLIFLTPSGIIKFFDLLFHLSGSHGRILY
T*KQWNWKILSFRKEINHNYLSCLKDKYR*TQGK
GNLVSLHVISVSKLPVGFLMQF*LLE*KSPKGV
LLLFSP*INSLDFKLKIYICLWGLVYLGLRFFF
LFFFAVLFMLLKPSSCFCPTPFCCALSILCGCLT
EERTFLNIPVTAVIV*G*AAWKNVGNTKF*SLY
PQQFD*LYHGPGYFTFLWTSVSSS*NEDTVDYH
LPKGILVFERELSAPFYKHDVPKLFYYKGSLKHP
NFLVWRTGWKPIWYLLFAMHVIKFTCLLCPALP
LF*ITGIEY*VHMVIAGFLNE*KLWIYL

Frame 2

PRDGEDGSGRGLCGDSGD*ARGGRLSETFPLLP
SEPARDRRPGRGHRLLGGPRSPWQGSWCPKGDQ
ISAKCVFCQ*AECI*SRSSARQQVASLWTQRLS
WVYFYPKPLPPRLPVALGETVP*VIFPET*CM*P
GQTHV*RRDPRSVGTEQRVPEV*RSD*TETPKF
TGETALGDRRLPL*LGQ*EILSRSLHTFPF*PG
FPLRASSRCLWI*GFPS*SRDPELLPPGLHTGNP
RRQI*ARSLQTLAVIQLWTVRHLSPGWSSKG*G
PHGHVYAQW*HHDNVGFQPPLEPRSPSCPSKSR
RGRPASLPRGTSPCCPPERFNGRALFYGGLAGVC
QLLEDRSC*HDCPTGPGHRPEFPSRTHRG*KKR
HQYRRFLPSG*PE*RSKTGQDKP*QLRLGDPIL
FTQAPAYRK*SCYCVLPWTSAPRQAKNRDREELI
VDHTVALEPTQK*TQPLCSEKCLTWSVPSYMLA
VMYVEKSVQGGMFFHNSLLSLCYFL*GR*K*VS
MFAEYLNTSDFINEKYSTPPSTPSGNLW*NCGSV
NQLLVSSS*LPQASSNSLIFSSTSLALMEESFT
HENNGTGKSCLLEKKLITTISLA*KINIGKPKE
RGI*FLYMSFRSPNSLLAF*CNFNCWNKKVPRVF
CYCFLHE*THLILN*RSISVFGV*SIWD*GFFF
CFSLLYCSCY*SPLAVSALHHSAVP*VFFVAVS
QKREHFLIFQSLLLLSEGRQLGKM*ATPSFNLYT
PNNLTDYIMVQVTLHFSGPRFPHHKMKIL*TTI
FLKGYWYLKEN*VLLSTNMMCQNCFIIRAL*NI
LTSLCGGLAGSPFGTYCLQCMLLSLHVSSVLLCP
FFKLLALNIEFIW**QGF*MNKNYGFIS

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