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Sequences

Sequence XM_166164

AACGCGCCGGAATCTGAGGTGTGAGTAGAGCCTGGGGGAGAGTGGATCCAGGACTGGGAGTTTTCATCCTCTTGAATAAGAACTCGACAACAGAGTGGGA
ACTTTCTGTCTTGTGATCCATTGCCTGGTGAGTCACAGCTCACACCATGGATTTAACCTGAGAGCTTCAACTTCTGCTTTGGCCCTGGAGTTCCCATGCC
CTGGTGTCTTCTACCAGTTCTTAGTGTGTTGCACTGGAGCACAGAGGACACTCGATCGTGCGGCGCGCAGGGCGGGGGGCCGCCGCTGCCTCCCCGCGGG
ATGGCTGGCACTGTGCTCGGAGTCGGTGCGGGCGTGTTCATCTTAGCCCTGCTCTGGGTGGCAGTGCTGCTGCTGTGTGTGCTGCTGTCCAGAGCCTCCG
GGGCGGCGAGGTTCTCTGTCATTTTTTTATTCTTCGGTGCTGTGATCATCACATCAGTTCTGTTGCTTTTCCCGCGAGCTGGTGAATTCCCAGCCCCAGA
AGTGGAAGTTAAGATTGTGGATGACTTTTTCATTGGCCGCTATGTCCTGCTGGCTTTCCTTAGTGCCATCTTCCTTGGAGGCCTCTTCTTGGTTTTAATC
CATTATGTTCTGGAGCCGATCTATGCCAAACCACTGCACTCCTACTGACCACTCTTCAGGAAAACGAAAACCTGTTCTCTCCTTCATTGTGATGACATTG
ATGAGCAGGAAGGCACTATTCAGAGCCTTGTTTTGACAGCCCTCATGCCTTAAGGTTAGAGGAGTATCTGTCCATCACTAAGACAAATCTCTGGAGTCCT
GGCTTCCAGAAACAGGATTGCCAAATTGTCCCTGTGGGGCTAGATTCTTACCAGCTTAAGAAGGATATTGCTATCTTCTTAGTACCCGTACCTTAGGATT
TCCAACTGTTTTGAAAGGGAAATAGTAACAGTGATCTGCTTAGAGTGGATTTTCACTCAAGTCCTTAGTAAGTGGATTTTGGGGAAAAAAGCACCTGGGC
TTCTGGTTCTTTTTGATAATATATAAAATTATTCATTATGAGGTTGCAGTTGTTTGCAAAGGAGAGGCACTCAAATTTGAAAGGTTATTTTAATGTGATA
ATTTGGAAGACTTACTCAGATGTTGGTCATTGACCACTCTGTGCATATATTTCTGCAGAGCTCTGTGAAGGCAATGAGTGTCACTTCCCTCTGCTCTAAT
AAAGCAATAAATAATAGCTAAAGGGCTGACTTTCACTTCGAACTCTTGGCCACGGCTTTTTAATCAAGTTCTTTAGGTTTCCTTGGGATTAGAGGAAAGG
TATGGAAATATTGTTTTTTGTTTTTTGTCTTGCCATGTATCTGTAGGTTTTTTTCTTCCATGATGTGGTGGGCTGTGTGTGCCTTATTTAATTACCATGA
GTCCATTTTGGGGTGTCTTCACTTTTCATCTTTGTAGCCCTTTCTCCAAAGCTAGTGAGGAAGGTATATTCTCAACATCAGATATAACTCTATACCTGTC
TGATCTCCCAGACCAAATGAAATTTGCATTAAATGGAGGGGCCCTGGTCAGGTTCCACTTTGGAAGTCTGATCCTGACTCCCTAGAGCCATTTGAAAAAG
AATCTTCTGGCTTAAAATTAAGAACCAAGAAAACAAGTTGGAAAGAGATCACTGATGGAGTATGTGCTCTATGCCAATAGCACACTAATTCCTTTGAGGT
TTAATTTATTTAATTTTTACAACGGTCTCATTTTTATCATCCCCACTTTAAA
  • refseq_LOC219854.F5 (forward primer)
  • refseq_LOC219854.R5 (reverse primer)
  • Exon skipping and alternative donor or acceptor

Frame 0

NAPESEV*VEPGGEWIQDWEFSSS*IRTRQQSG
NFLSCDPLPGESQLTPWI*PESFNFCFGPGVPMP
WCLLPVLSVLHWSTEDTRSCGAQGGGPPLPPRG
MAGTVLGVGAGVFILALLWVAVLLLCVLLSRAS
GAARFSVIFLFFGAVIITSVLLLFPRAGEFPAPE
VEVKIVDDFFIGRYVLLAFLSAIFLGGLFLVLI
HYVLEPIYAKPLHSY*PLFRKTKTCSLLHCDDI
DEQEGTIQSLVLTALMP*G*RSICPSLRQISGVL
ASRNRIAKLSLWG*ILTSLRRILLSS*YPYLRI
SNCFEREIVTVICLEWIFTQVLSKWILGKKAPG
LLVLFDNI*NYSL*GCSCLQRRGTQI*KVILM**
FGRLTQMLVIDHSVHIFLQSSVKAMSVTSLCSN
KAINNS*RADFHFELLATAF*SSSLGFLGIRGK
VWKYCFLFFVLPCICRFFSSMMWWAVCALFNYHE
SILGCLHFSSL*PFLQS**GRYILNIRYNSIPV
*SPRPNEICIKWRGPGQVPLWKSDPDSLEPFEK
ESSGLKLRTKKTSWKEITDGVCALCQ*HTNSFEV
*FI*FLQRSHFYHPHFK

Frame 1

TRRNLRCE*SLGESGSRTGSFHPLE*ELDNRVG
TFCLVIHCLVSHSSHHGFNLRASTSALALEFPC
PGVFYQFLVCCTGAQRTLDRAARRAGGRRCLPAG
WLALCSESVRACSS*PCSGWQCCCCVCCCPEPP
GRRGSLSFFYSSVL*SSHQFCCFSRELVNSQPQ
KWKLRLWMTFSLAAMSCWLSLVPSSLEASSWF*S
IMFWSRSMPNHCTPTDHSSGKRKPVLSFIVMTL
MSRKALFRALF*QPSCLKVRGVSVHH*DKSLES
WLPETGLPNCPCGARFLPA*EGYCYLLSTRTLGF
PTVLKGK**Q*SA*SGFSLKSLVSGFWGKKHLG
FWFFLIIYKIIHYEVAVVCKGEALKFERLF*CD
NLEDLLRCWSLTTLCIYFCRAL*RQ*VSLPSALI
KQ*IIAKGLTFTSNSWPRLFNQVL*VSLGLEER
YGNIVFCFLSCHVSVGFFLP*CGGLCVPYLITM
SPFWGVFTFHLCSPFSKASEEGIFSTSDITLYLS
DLPDQMKFALNGGALVRFHFGSLILTP*SHLKK
NLLA*N*EPRKQVGKRSLMEYVLYANSTLIPLR
FNLFNFYNGLIFIIPTL

Frame 2

RAGI*GVSRAWGRVDPGLGVFILLNKNSTTEWE
LSVL*SIAW*VTAHTMDLT*ELQLLLWPWSSHA
LVSSTSS*CVALEHRGHSIVRRAGRGAAAASPR
DGWHCARSRCGRVHLSPALGGSAAAVCAAVQSLR
GGEVLCHFFILRCCDHHISSVAFPASW*IPSPR
SGS*DCG*LFHWPLCPAGFP*CHLPWRPLLGFN
PLCSGADLCQTTALLLTTLQENENLFSPSL**H*
*AGRHYSEPCFDSPHALRLEEYLSITKTNLWSP
GFQKQDCQIVPVGLDSYQLKKDIAIFLVPVP*D
FQLF*KGNSNSDLLRVDFHSSP**VDFGEKSTWA
SGSF**YIKLFIMRLQLFAKERHSNLKGYFNVI
IWKTYSDVGH*PLCAYISAELCEGNECHFPLL*
*SNK**LKG*LSLRTLGHGFLIKFFRFPWD*RKG
MEILFFVFCLAMYL*VFFFHDVVGCVCLI*LP*
VHFGVSSLFIFVALSPKLVRKVYSQHQI*LYTC
LISQTK*NLH*MEGPWSGSTLEV*S*LPRAI*KR
IFWLKIKNQENKLERDH*WSMCSMPIAH*FL*G
LIYLIFTTVSFLSSPL*

Sequence XM_933911

AACGCGCCGGAATCTGAGGTGTGAGTAGAGCCTGGGGGAGAGTGGATCCAGGTGAAGGGGGCAGAGGGCTTGAGTCAGTGTGAAAATCGGGGGATGGGTG
AGATATCTCCCTCCAGCAGCAGCACTTAGGCCACATTACCCTCTGAGGAATCCACATTTGTCTTAGATAGTTACCTGTGCAGGGATCAGTCCATTTATTC
CTATTTTCTCTGACAGCTGGATGAAAGG
GACTGGGAGTTTTCATCCTCTTGAATAAGAACTCGACAACAGAGTGGGAACTTTCTGTCTTGTGATCCATTG
CCTGTGTGTTGCACTGGAGCACAGAGGACACTCGATCGTGCGGCGCGCAGGGCGGGGGGCCGCCGCTGCCTCCCCGCGGGATGGCTGGCACTGTGCTCGG
AGT
CGGTGCGGGCGTGTTCATCTTAGCCCTGCTCTGGGTGGCAGTGCTGCTGCTGTGTGTGCTGCTGTCCAGAGCCTCCGGGGCGGCGAGGTTCTCTGTC
ATTTTTTTATTCTTCGGTGCTGTGATCATCACATCAGTTCTGTTGCTTTTCCCGCGAGCTGGTGAATTCCCAGCCCCAGAAGTGGAAGTTAAGATTGTGG
ATGACTTTTTCATTGGCCGCTATGTCCTGCTGGCTTTCCTTAGTGCCATCTTCCTTGGAGGCCTCTTCTTGGTTTTAATCCATTATGTTCTGGAGCCGAT
CTATGCCAAACCACTGCACTCCTACTGACCACTCTTCAGGAAAACGAAAACCTGTTCTCTCCTTCATTGTGATGACATTGATGAGCAGGAAGGCACTATT
CAGAGCCTTGTTTTGACAGCCCTCATGCCTTAAGGTTAGAGGAGTATCTGTCCATCACTAAGACAAATCTCTGGAGTCCTGGCTTCCAGAAACAGGATTG
CCAAATTGTCCCTGTGGGGCTAGATTCTTACCAGCTTAAGAAGGATATTGCTATCTTCTTAGTACCCGTACCTTAGGATTTCCAACTGTTTTGAAAGGGA
AATAGTAACAGTGATCTGCTTAGAGTGGATTTTCACTCAAGTCCTTAGTAAGTGGATTTTGGGGAAAAAAGCACCTGGGCTTCTGGTTCTTTTTGATAAT
ATATAAAATTATTCATTATGAGGTTGCAGTTGTTTGCAAAGGAGAGGCACTCAAATTTGAAAGGTTATTTTAATGTGATAATTTGGAAGACTTACTCAGA
TGTTGGTCATTGACCACTCTGTGCATATATTTCTGCAGAGCTCTGTGAAGGCAATGAGTGTCACTTCCCTCTGCTCTAATAAAGCAATAAATAATAGCTA
AAGGGCTGACTTTCACTTCGAACTCTTGGCCACGGCTTTTTAATCAAGTTCTTTAGGTTTCCTTGGGATTAGAGGAAAGGTATGGAAATATTGTTTTTTG
TTTTTTGTCTTGCCATGTATCTGTAGGTTTTTTTCTTCCATGATGTGGTGGGCTGTGTGTGCCTTATTTAATTACCATGAGTCCATTTTGGGGTGTCTTC
ACTTTTCATCTTTGTAGCCCTTTCTCCAAAGCTAGTGAGGAAGGTATATTCTCAACATCAGATATAACTCTATACCTGTCTGATCTCCCAGACCAAATGA
AATTTGCATTAAATGGAGGGGCCCTGGTCAGGTTCCACTTTGGAAGTCTGATCCTGACTCCCTAGAGCCATTTGAAAAAGAATCTTCTGGCTTAAAATTA
AGAACCAAGAAAACAAGTTGGAAAGAGATCACTGATGGAGTATGTGCTCTATGCCAATAGCACACTAATTCCTTTGAGGTTTAATTTATTTAATTTTTAC
AACGGTCTCATTTTTATCATCCCCACTTTAAA
  • refseq_LOC219854.F5 (forward primer)
  • refseq_LOC219854.R5 (reverse primer)
  • Exon skipping and alternative donor or acceptor

Frame 0

NAPESEV*VEPGGEWIQVKGAEGLSQCENRGMG
EISPSSSST*ATLPSEESTFVLDSYLCRDQSIYS
YFL*QLDER
DWEFSSS*IRTRQQSGNFLSCDPL
PVCCTGAQRTLDRAARRAGGRRCLPAGWLALCS
E
SVRACSS*PCSGWQCCCCVCCCPEPPGRRGSLS
FFYSSVL*SSHQFCCFSRELVNSQPQKWKLRLW
MTFSLAAMSCWLSLVPSSLEASSWF*SIMFWSR
SMPNHCTPTDHSSGKRKPVLSFIVMTLMSRKALF
RALF*QPSCLKVRGVSVHH*DKSLESWLPETGL
PNCPCGARFLPA*EGYCYLLSTRTLGFPTVLKG
K**Q*SA*SGFSLKSLVSGFWGKKHLGFWFFLII
YKIIHYEVAVVCKGEALKFERLF*CDNLEDLLR
CWSLTTLCIYFCRAL*RQ*VSLPSALIKQ*IIA
KGLTFTSNSWPRLFNQVL*VSLGLEERYGNIVFC
FLSCHVSVGFFLP*CGGLCVPYLITMSPFWGVF
TFHLCSPFSKASEEGIFSTSDITLYLSDLPDQM
KFALNGGALVRFHFGSLILTP*SHLKKNLLA*N*
EPRKQVGKRSLMEYVLYANSTLIPLRFNLFNFY
NGLIFIIPTL

Frame 1

TRRNLRCE*SLGESGSR*RGQRA*VSVKIGGWV
RYLPPAAALRPHYPLRNPHLS*IVTCAGISPFI
PIFSDSWMKG
TGSFHPLE*ELDNRVGTFCLVIHC
LCVALEHRGHSIVRRAGRGAAAASPRDGWHCAR
S
RCGRVHLSPALGGSAAAVCAAVQSLRGGEVLC
HFFILRCCDHHISSVAFPASW*IPSPRSGS*DCG
*LFHWPLCPAGFP*CHLPWRPLLGFNPLCSGAD
LCQTTALLLTTLQENENLFSPSL**H**AGRHY
SEPCFDSPHALRLEEYLSITKTNLWSPGFQKQDC
QIVPVGLDSYQLKKDIAIFLVPVP*DFQLF*KG
NSNSDLLRVDFHSSP**VDFGEKSTWASGSF**
YIKLFIMRLQLFAKERHSNLKGYFNVIIWKTYSD
VGH*PLCAYISAELCEGNECHFPLL**SNK**L
KG*LSLRTLGHGFLIKFFRFPWD*RKGMEILFF
VFCLAMYL*VFFFHDVVGCVCLI*LP*VHFGVSS
LFIFVALSPKLVRKVYSQHQI*LYTCLISQTK*
NLH*MEGPWSGSTLEV*S*LPRAI*KRIFWLKI
KNQENKLERDH*WSMCSMPIAH*FL*GLIYLIFT
TVSFLSSPL*

Frame 2

RAGI*GVSRAWGRVDPGEGGRGLESV*KSGDG*
DISLQQQHLGHITL*GIHICLR*LPVQGSVHLF
LFSLTAG*K
GLGVFILLNKNSTTEWELSVL*SI
ACVLHWSTEDTRSCGAQGGGPPLPPRGMAGTVLG
V
GAGVFILALLWVAVLLLCVLLSRASGAARFSV
IFLFFGAVIITSVLLLFPRAGEFPAPEVEVKIV
DDFFIGRYVLLAFLSAIFLGGLFLVLIHYVLEPI
YAKPLHSY*PLFRKTKTCSLLHCDDIDEQEGTI
QSLVLTALMP*G*RSICPSLRQISGVLASRNRI
AKLSLWG*ILTSLRRILLSS*YPYLRISNCFERE
IVTVICLEWIFTQVLSKWILGKKAPGLLVLFDN
I*NYSL*GCSCLQRRGTQI*KVILM**FGRLTQ
MLVIDHSVHIFLQSSVKAMSVTSLCSNKAINNS*
RADFHFELLATAF*SSSLGFLGIRGKVWKYCFL
FFVLPCICRFFSSMMWWAVCALFNYHESILGCL
HFSSL*PFLQS**GRYILNIRYNSIPV*SPRPNE
ICIKWRGPGQVPLWKSDPDSLEPFEKESSGLKL
RTKKTSWKEITDGVCALCQ*HTNSFEV*FI*FL
QRSHFYHPHFK

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