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Sequences

Sequence NM_001007098

ACGCGCCTGTGTTGCCGCCCGCGGCCCTGGCTTCGGGCTTCAGGGAGCTCTGGTGCAGTCTCCGCCTGTCAGTGCCGGCAGTCGTCCGCGGCGCCCGCCC
CGGTCCCGCACTGGTGCAGCCATGTCCTCTTCCCCGTGGGAGCCTGCGACCCTGCGCCGGGTGTTCGTGGTGGGGGTTGGCATGACCAAGTTTGTGAAGC
CTGGAGCTGAGAATTCAAGAGACTACCCTGACTTGGCAGAAGAAGCAGGCAAGAAGGCTTTAGCTGATGCACAGATCCCTTATTCAGCAGTGGACCAGGC
ATGTGTTGGCTATGTTTTTGGTGTGGCAGAATGTGTCTTGGCTCTTGGGTTTGAGAAGATGAGTAAGGGAAGCCTTGGAATAAAATTTTCAGATAGAACC
ATTCCCACTGATAAGCATGTTGACCTCCTGATCAATAAGTATGGATTGTCTGCTCACCCAGTTGCTCCTCAGATGTTTGGGTATGCTGGAAAAGAACATA
TGGAAAAATATGGAACAAAAATTGAACACTTTGCAAAAATTGGATGGAAAAATCATAAACATTCAGTTAATAACCCGTATTCCCAGTTCCAAGATGAATA
CAGTTTAGATGAAGTGATGGCATCTAAAGAAGTTTTTGATTTTTTGACTATCTTACAATGTTGTCCCACTTCAGATGGTGCTGCAGCAGCAATTTTGGCC
AGTGAAGCATTTGTACAGAAGTATGGCCTGCAATCCAAAGCTGTGGAAATTTTGGCACAAGAAATGATGACTGATTTGCCAAGCTCGTTTGAAGAAAAAA
GCATTATTAAAATGGTTGGCTTTGATATGAGTAAAGAAGCTGCAAGAAAATGCTATGAGAAATCTGGCCTGACACCAAATGATATTGACGTAATAGAACT
TCACGATTGCTTTTCTACCAACGAACTCCTTACTTATGAAGCACTGGGACTCTGTCCAGAAGGACAAGGTGCAACGCTGGTTGATAGAGGAGATAATACA
TATGGAGGAAAGTGGGTCATAAATCCTAGTGGTGGACTGATTTCAAAGGGACACCCACTAGGCGCTACAGGAGGACATTCCTGCTCTTGAAATTTCCTGA
TAACCCGGACAAGTTCATGGAAAGCTTGATCTACATTCATCCTAATCTTTGCTGATGCCTCCATGTATGTTACCTTAAGTTGCCGTGCTAACTGCCGTCC
TTCTTCCTGTGTTACCTGTCTTTGATGATCCAGATCTGCTTTATTACCAATTAAAATCATTGGGAACTCATCACGATCCTTTACTCTGAGAATCTGTCTT
TGAAACTTATAGATTTCTTCAAAACTGCCTCTATCTGTGACTGAAAAGACCAACAGGAAGCCCTCGCCAGTCCTCATATACTGTTCTCTCATGGCTCCAA
GCTCTTCTTGTCCTGCTGTATCCAAAATATCTAGCCGGGCTGCTCTGTCATCTATCACACACTGCTTTGTGTAAGAATCTTCATTGGTTGGATCATAATC
CGTTACAAAATAGGACTCCCAACTTAGGAAACAAAACATTTGTAATATGATTGAAGACTCCTGCATGCCTCCTCAATAATATTCCCCTCTCTCCTCCCCC
AGCACCAAGAGGTAATCAATATCCTGAATTTGGTATCTGTCATTCTCATGCATTTATACAACATTAGTAATCATATGATAGTATTCCTAAGCTATGTTTT
GGAGAGGACACCACTGCAAATCTTCAGCCCTATACTAGCTTTTATCGGTAGCCATCAATTGCAGTTTTAATAGAAATACAAATACATCAAGTGTCTGTTC
TTTAATTTGTAAAGAAAATTTGTTTTCTAGCGTGACACCCTCAAGGTACCGTATCTGTATGTAAATGTTGTGCCCAATGCTACACAGACATTATTTTAAA
ACTATTTTCTGCCTTTGGTAAATAGACTAAACTGTTTTCTTTATTCCTCAAAAGAATTAGATCATACTTCAGTGTTGATTTTGTTGCTAATGGGACATGG
AGATGTCTGGATGATAATAAATATTCCTGTGGTATGGTCACTGAA
  • refseq_SCP2.F1 (forward primer)
  • refseq_SCP2.R1 (reverse primer)
  • Single exon skipping

Frame 0

TRLCCRPRPWLRASGSSGAVSACQCRQSSAAPA
PVPHWCSHVLFPVGACDPAPGVRGGGWHDQVCEA
WS*EFKRLP*LGRRSRQEGFS*CTDPLFSSGPG
MCWLCFWCGRMCLGSWV*EDE*GKPWNKIFR*N
HSH**AC*PPDQ*VWIVCSPSCSSDVWVCWKRTY
GKIWNKN*TLCKNWMEKS*TFS**PVFPVPR*I
QFR*SDGI*RSF*FFDYLTMLSHFRWCCSSNFG
Q*SICTEVWPAIQSCGNFGTRNDD*FAKLV*RKK
HY*NGWL*YE*RSCKKML*EIWPDTK*Y*RNRT
SRLLFYQRTPYL*STGTLSRRTRCNAG**RR*Y
IWRKVGHKS*WWTDFKGTPTRRYRRTFLLLKFPD
NPDKFMESLIYIHPNLC*CLHVCYLKLPC*LPS
FFLCYLSLMIQICFITN*NHWELITILYSENLS
LKLIDFFKTASICD*KDQQEALASPHILFSHGSK
LFLSCCIQNI*PGCSVIYHTLLCVRIFIGWIII
RYKIGLPT*ETKHL*YD*RLLHASSIIFPSLLP
QHQEVINILNLVSVILMHLYNISNHMIVFLSYVL
ERTPLQIFSPILAFIGSHQLQF**KYKYIKCLF
FNL*RKFVF*RDTLKVPYLYVNVVPNATQTLF*
NYFLPLVNRLNCFLYSSKELDHTSVLILLLMGHG
DVWMIINIPVVWSL

Frame 1

RACVAARGPGFGLQGALVQSPPVSAGSRPRRPP
RSRTGAAMSSSPWEPATLRRVFVVGVGMTKFVK
PGAENSRDYPDLAEEAGKKALADAQIPYSAVDQA
CVGYVFGVAECVLALGFEKMSKGSLGIKFSDRT
IPTDKHVDLLINKYGLSAHPVAPQMFGYAGKEH
MEKYGTKIEHFAKIGWKNHKHSVNNPYSQFQDEY
SLDEVMASKEVFDFLTILQCCPTSDGAAAAILA
SEAFVQKYGLQSKAVEILAQEMMTDLPSSFEEK
SIIKMVGFDMSKEAARKCYEKSGLTPNDIDVIEL
HDCFSTNELLTYEALGLCPEGQGATLVDRGDNT
YGGKWVINPSGGLISKGHPLGATGGHSCS*NFL
ITRTSSWKA*STFILIFADASMYVTLSCRANCRP
SSCVTCL**SRSALLPIKIIGNSSRSFTLRICL
*NL*ISSKLPLSVTEKTNRKPSPVLIYCSLMAP
SSSCPAVSKISSRAALSSITHCFV*ESSLVGS*S
VTK*DSQLRKQNICNMIEDSCMPPQ*YSPLSSP
STKR*SIS*IWYLSFSCIYTTLVII**YS*AMF
WRGHHCKSSALY*LLSVAINCSFNRNTNTSSVCS
LICKENLFSSVTPSRYRICM*MLCPMLHRHYFK
TIFCLW*ID*TVFFIPQKN*IILQC*FCC*WDM
EMSG***IFLWYGH*

Frame 2

APVLPPAALASGFRELWCSLRLSVPAVVRGARP
GPALVQPCPLPRGSLRPCAGCSWWGLA*PSL*S
LELRIQETTLTWQKKQARRL*LMHRSLIQQWTR
HVLAMFLVWQNVSWLLGLRR*VREALE*NFQIEP
FPLISMLTS*SISMDCLLTQLLLRCLGMLEKNI
WKNMEQKLNTLQKLDGKIINIQLITRIPSSKMN
TV*MK*WHLKKFLIF*LSYNVVPLQMVLQQQFWP
VKHLYRSMACNPKLWKFWHKK**LICQARLKKK
ALLKWLALI*VKKLQENAMRNLA*HQMILT**N
FTIAFLPTNSLLMKHWDSVQKDKVQRWLIEEIIH
MEESGS*ILVVD*FQRDTH*ALQEDIPALEIS*
*PGQVHGKLDLHSS*SLLMPPCMLP*VAVLTAV
LLPVLPVFDDPDLLYYQLKSLGTHHDPLL*ESVF
ETYRFLQNCLYL*LKRPTGSPRQSSYTVLSWLQ
ALLVLLYPKYLAGLLCHLSHTALCKNLHWLDHN
PLQNRTPNLGNKTFVI*LKTPACLLNNIPLSPPP
APRGNQYPEFGICHSHAFIQH**SYDSIPKLCF
GEDTTANLQPYTSFYR*PSIAVLIEIQIHQVSV
L*FVKKICFLA*HPQGTVSVCKCCAQCYTDIILK
LFSAFGK*TKLFSLFLKRIRSYFSVDFVANGTW
RCLDDNKYSCGMVTE

Sequence NM_002979

ACGCGCCTGTGTTGCCGCCCGCGGCCCTGGCTTCGGGCTTCAGGGAGCTCTGGTGCAGTCTCCGCCTGTCAGTGCCGGCAGTCGTCCGCGGCGCCCGCCC
CGGTCCCGCACTGGTGCAGCCATGTCCTCTTCCCCGTGGGAGCCTGCGACCCTGCGCCGGGTGTTCGTGGTGGGGGTTGGCATGACCAAGTTTGTGAAGC
CTGGAGCTGAGAATTCAAGAGACTACCCTGACTTGGCAGAAGAAGCAGGCAAGAAGGCTTTAGCTGATGCACAGATCCCTTATTCAGCAGTGGACCAGGC
ATGTGTTGGCTATGTTTTTGGTGACTCTACCTGTGGGCAGAGGGCTATCTATCACAGTTTGGGAATGACTGGAATTCCTATAATCAATGTCAACAATAAC
TGTGCTACTGGTTCTACTGCTTTGTTTATGGCCCGCCAGCTGATTCAGGGTGGTGTGGCAGAATGTGTCTTGGCTCTTGGGTTTGAGAAGATGAGTAAGG
GAAGCCTTGGAATAAAATTTTCAGATAGAACCATTCCCACTGATAAGCATGTTGACCTCCTGATCAATAAGTATGGATTGTCTGCTCACCCAGTTGCTCC
TCAGATGTTTGGGTATGCTGGAAAAGAACATATGGAAAAATATGGAACAAAAATTGAACACTTTGCAAAAATTGGATGGAAAAATCATAAACATTCAGTT
AATAACCCGTATTCCCAGTTCCAAGATGAATACAGTTTAGATGAAGTGATGGCATCTAAAGAAGTTTTTGATTTTTTGACTATCTTACAATGTTGTCCCA
CTTCAGATGGTGCTGCAGCAGCAATTTTGGCCAGTGAAGCATTTGTACAGAAGTATGGCCTGCAATCCAAAGCTGTGGAAATTTTGGCACAAGAAATGAT
GACTGATTTGCCAAGCTCGTTTGAAGAAAAAAGCATTATTAAAATGGTTGGCTTTGATATGAGTAAAGAAGCTGCAAGAAAATGCTATGAGAAATCTGGC
CTGACACCAAATGATATTGACGTAATAGAACTTCACGATTGCTTTTCTACCAACGAACTCCTTACTTATGAAGCACTGGGACTCTGTCCAGAAGGACAAG
GTGCAACGCTGGTTGATAGAGGAGATAATACATATGGAGGAAAGTGGGTCATAAATCCTAGTGGTGGACTGATTTCAAAGGGACACCCACTAGGCGCTAC
AGGTCTTGCTCAGTGTGCAGAACTCTGCTGGCAGCTGAGAGGGGAAGCCGGAAAGAGGCAAGTTCCTGGTGCAAAGGTGGCTCTGCAGCATAATTTAGGC
ATTGGAGGAGCTGTGGTTGTAACACTCTACAAGATGGGTTTTCCGGAAGCCGCCAGTTCTTTTAGAACTCATCAAATTGAAGCTGTTCCAACCAGCTCTG
CAAGTGATGGATTTAAGGCAAATCTTGTTTTTAAGGAGATTGAGAAGAAACTTGAAGAGGAAGGGGAACAGTTTGTGAAGAAAATCGGTGGTATTTTTGC
CTTCAAGGTGAAAGATGGCCCTGGGGGTAAAGAGGCCACCTGGGTGGTGGATGTGAAGAATGGCAAAGGATCAGTGCTTCCTAACTCAGATAAGAAGGCT
GACTGCACAATCACAATGGCTGACTCAGACTTCCTGGCTTTAATGACTGGTAAAATGAATCCTCAGTCGGCCTTCTTTCAAGGCAAATTGAAAATCACTG
GCAACATGGGTCTCGCTATGAAGTTACAAAATCTTCAGCTTCAGCCAGGCAACGCTAAGCTCTGAAGAACTCCCTTTGGCTACTTTTGAAAATCAAGATG
AGATATATAGATATATATCCATACATTTTATTGTCAGAATTTAGACTGAAACTACACATTGGCAAATAGCGTGGGATAGATTTGTTTCTTAATGGGTGTG
ACCAATCCTGTTTTTCCTATGCTCTGGGTGAATAGAGCCTGATGGTATACTACTGCTTTGCGGAATTGCATACAACTGTGCATTACAAAGTTAATATGGT
AATTATGGTCTGGGGTAAAATTGAGTTTCAGAATAAAATTAGGAACAGTAAAATCCAAAGAACTATGTAAACAAAAAAGCTTTTGTTTTGCTTACAAAGT
ATATTTAAGGATTATTCTGCTGAAGATTCAGTTTAAGAGTTTTCCTTGGGAGAACTAAGTAAGAAACACAATGCCAACAGCTGGCCAGTAATTAGTGTTG
TGCACTTCATGTCATTAATCAATTTCTCAATAGTTCTTAAAATTAGTGAGATTAAAAATCTAAAAATTTTGCATTTCATGCTATCAGAAACAGTATTTTC
TTCCCAAATCAAAATAAAAGAAATATGATCAGAGCTTGAACACAGGCTTATTTTTAAAATAAAAATATTTTTAACATGGGTTTCCTTATTGAAAAATCAG
TGTATTAGTCATAAAACACCATCATTAAGAATAATTGAACAATAAAGTTTGCTTTCAGATGCAGTTTTCAAATTATAATCTCATTTCAATTTATAACGTT
CTCAGTCCTTTGTTATAATTTTCCTTTTTCATGTAAGTTTAATTATCTGCATTTATCTTTTTTCCTAGTTTTTCTAATACTAATGTTATTTCTTAAAATT
CAGTGAGATATAGGATAAAATAATGCTTTGAGAAGAATGTTTAATAGAAAATTAAAATAACTTTTTCTGGC
  • refseq_SCP2.F1 (forward primer)
  • refseq_SCP2.R1 (reverse primer)
  • Single exon skipping

Frame 0

TRLCCRPRPWLRASGSSGAVSACQCRQSSAAPA
PVPHWCSHVLFPVGACDPAPGVRGGGWHDQVCEA
WS*EFKRLP*LGRRSRQEGFS*CTDPLFSSGPG
MCWLCFW*LYLWAEGYLSQFGNDWNSYNQCQQ*
LCYWFYCFVYGPPADSGWCGRMCLGSWV*EDE*G
KPWNKIFR*NHSH**AC*PPDQ*VWIVCSPSCS
SDVWVCWKRTYGKIWNKN*TLCKNWMEKS*TFS
**PVFPVPR*IQFR*SDGI*RSF*FFDYLTMLSH
FRWCCSSNFGQ*SICTEVWPAIQSCGNFGTRND
D*FAKLV*RKKHY*NGWL*YE*RSCKKML*EIW
PDTK*Y*RNRTSRLLFYQRTPYL*STGTLSRRTR
CNAG**RR*YIWRKVGHKS*WWTDFKGTPTRRY
RSCSVCRTLLAAERGSRKEASSWCKGGSAA*FR
HWRSCGCNTLQDGFSGSRQFF*NSSN*SCSNQLC
K*WI*GKSCF*GD*EET*RGRGTVCEENRWYFC
LQGERWPWG*RGHLGGGCEEWQRISAS*LR*EG
*LHNHNG*LRLPGFNDW*NESSVGLLSRQIENHW
QHGSRYEVTKSSASARQR*ALKNSLWLLLKIKM
RYIDIYPYILLSEFRLKLHIGK*RGIDLFLNGC
DQSCFSYALGE*SLMVYYCFAELHTTVHYKVNMV
IMVWGKIEFQNKIRNSKIQRTM*TKKLLFCLQS
IFKDYSAEDSV*EFSLGELSKKHNANSWPVISV
VHFMSLINFSIVLKISEIKNLKILHFMLSETVFS
SQIKIKEI*SELEHRLIFKIKIFLTWVSLLKNQ
CISHKTPSLRIIEQ*SLLSDAVFKL*SHFNL*R
SQSFVIIFLFHVSLIICIYLFS*FF*Y*CYFLKF
SEI*DKIML*EECLIEN*NNFFW

Frame 1

RACVAARGPGFGLQGALVQSPPVSAGSRPRRPP
RSRTGAAMSSSPWEPATLRRVFVVGVGMTKFVK
PGAENSRDYPDLAEEAGKKALADAQIPYSAVDQA
CVGYVFGDSTCGQRAIYHSLGMTGIPIINVNNN
CATGSTALFMARQLIQGGVAECVLALGFEKMSK
GSLGIKFSDRTIPTDKHVDLLINKYGLSAHPVAP
QMFGYAGKEHMEKYGTKIEHFAKIGWKNHKHSV
NNPYSQFQDEYSLDEVMASKEVFDFLTILQCCP
TSDGAAAAILASEAFVQKYGLQSKAVEILAQEMM
TDLPSSFEEKSIIKMVGFDMSKEAARKCYEKSG
LTPNDIDVIELHDCFSTNELLTYEALGLCPEGQ
GATLVDRGDNTYGGKWVINPSGGLISKGHPLGAT
GLAQCAELCWQLRGEAGKRQVPGAKVALQHNLG
IGGAVVVTLYKMGFPEAASSFRTHQIEAVPTSS
ASDGFKANLVFKEIEKKLEEEGEQFVKKIGGIFA
FKVKDGPGGKEATWVVDVKNGKGSVLPNSDKKA
DCTITMADSDFLALMTGKMNPQSAFFQGKLKIT
GNMGLAMKLQNLQLQPGNAKL*RTPFGYF*KSR*
DI*IYIHTFYCQNLD*NYTLANSVG*ICFLMGV
TNPVFPMLWVNRA*WYTTALRNCIQLCITKLIW
*LWSGVKLSFRIKLGTVKSKELCKQKSFCFAYKV
YLRIILLKIQFKSFPWEN*VRNTMPTAGQ*LVL
CTSCH*SISQ*FLKLVRLKI*KFCISCYQKQYF
LPKSK*KKYDQSLNTGLFLK*KYF*HGFPY*KIS
VLVIKHHH*E*LNNKVCFQMQFSNYNLISIYNV
LSPLL*FSFFM*V*LSAFIFFPSFSNTNVIS*N
SVRYRIK*CFEKNV**KIKITFSG

Frame 2

APVLPPAALASGFRELWCSLRLSVPAVVRGARP
GPALVQPCPLPRGSLRPCAGCSWWGLA*PSL*S
LELRIQETTLTWQKKQARRL*LMHRSLIQQWTR
HVLAMFLVTLPVGRGLSITVWE*LEFL*SMSTIT
VLLVLLLCLWPAS*FRVVWQNVSWLLGLRR*VR
EALE*NFQIEPFPLISMLTS*SISMDCLLTQLL
LRCLGMLEKNIWKNMEQKLNTLQKLDGKIINIQL
ITRIPSSKMNTV*MK*WHLKKFLIF*LSYNVVP
LQMVLQQQFWPVKHLYRSMACNPKLWKFWHKK*
*LICQARLKKKALLKWLALI*VKKLQENAMRNLA
*HQMILT**NFTIAFLPTNSLLMKHWDSVQKDK
VQRWLIEEIIHMEESGS*ILVVD*FQRDTH*AL
QVLLSVQNSAGS*EGKPERGKFLVQRWLCSII*A
LEELWL*HSTRWVFRKPPVLLELIKLKLFQPAL
QVMDLRQILFLRRLRRNLKRKGNSL*RKSVVFL
PSR*KMALGVKRPPGWWM*RMAKDQCFLTQIRRL
TAQSQWLTQTSWL**LVK*ILSRPSFKAN*KSL
ATWVSL*SYKIFSFSQATLSSEELPLATFENQD
EIYRYISIHFIVRI*TETTHWQIAWDRFVS*WV*
PILFFLCSG*IEPDGILLLCGIAYNCALQS*YG
NYGLG*N*VSE*N*EQ*NPKNYVNKKAFVLLTK
YI*GLFC*RFSLRVFLGRTK*ETQCQQLASN*CC
ALHVINQFLNSS*N**D*KSKNFAFHAIRNSIF
FPNQNKRNMIRA*TQAYF*NKNIFNMGFLIEKS
VY*S*NTIIKNN*TIKFAFRCSFQIIISFQFITF
SVLCYNFPFSCKFNYLHLSFFLVFLILMLFLKI
Q*DIG*NNALRRMFNRKLK*LFL

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