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Sequence NM_001024940
CACGCCCCGGGCCGGGCCGCAGCCTCCTGGGCTTCGTGGGGGCAGACCCAGCCTTTCCCGGCAGCGAGCGCTCGGCCAGGTGCACTAGGCGCTGTGCGGGCCCCCCTTCCCCGCGGAGCCATGGAGGCTGTGGAACTCGCCAGAAAACTGCAGGAGGAAGCTACGTGCTCCATCTGTCTGGATTACTTCACAGACCCTGT
GATGACCACCTGTGGCCACAACTTCTGCCGAGCCTGCATCCAGCTGAGCTGGGAAAAGGCGAGGGGCAAGAAGGGGAGGCGGAAGCGGAAGGGCTCCTTC
CCCTGCCCCGAGTGCAGAGAGATGTCCCCGCAGAGGAACCTGCTGCCCAACCGGCTGCTGACCAAGGTGGCCGAGATGGCGCAGCAGCATCCTGGTCTGC
AGAAGCAAGACCTGTGCCAGGAGCACCACGAGCCCCTCAAGCTTTTCTGCCAGAAGGACCAGAGCCCCATCTGTGTGGTGTGCAGGGAGTCCCGGGAGCA
CCGGCTGCACAGGGTGCTGCCCGCCGAGGAGGCAGTGCAGGGGTACAAGTTGAAGCTGGAGGAGGACATGGAGTACCTTCGGGAGCAGATCACCAGGACA
GGGAATCTGCAGGCCAGGGAGGAGCAGAGCTTAGCCGAGTGGCAGGGCAAGGTGAAGGAGCGGAGAGAACGCATTGTGCTGGAGTTTGAGAAGATGAACC
TCTACCTGGTGGAAGAAGAGCAGAGGCTCCTCCAGGCTCTGGAGACGGAAGAAGAGGAGACTGCCAGCAGGCTCCGGGAGAGCGTGGCCTGCCTGGACCG
GCAGGGTCACTCTCTGGAGCTGCTGCTGCTGCAGCTGGAGGAGCGGAGCACACAGGGGCCCCTCCAGATGCTGCAGGACATGAAGGAACCCCTGAGCAGG
AAGAACAACGTGAGTGTGCAGTGCCCAGAGGTTGCCCCCCCAACCAGACCCAGGACTGTGTGCAGAGTTCCCGGACAGATTGAAGTGCTAAGAGGCTTTC
TAGAGGATGTGGTGCCTGATGCCACCTCCGCGTACCCCTACCTCCTCCTGTATGAGAGCCGCCAGAGGCGCTACCTCGGCTCTTCGCCGGAGGGCAGTGG
GTTCTGCAGCAAGGACCGATTTGTGGCTTACCCCTGTGCTGTGGGCCAGACGGCCTTCTCCTCTGGGAGGCACTACTGGGAGGTGGGCATGAACATCACC
GGGGACGCGTTGTGGGCCCTGGGTGTGTGCAGGGACAACGTGAGCCGGAAAGACAGGGTCCCCAAGTGCCCCGAAAACGGCTTCTGGGTGGTGCAGCTGT
CCAAGGGGACCAAGTACTTATCCACCTTCTCTGCCCTAACCCCGGTCATGCTGATGGAGCCTCCCAGCCACATGGGCATCTTCCTGGACTTCGAAGCCGG
GGAAGTGTCCTTCTACAGTGTAAGCGATGGGTCCCACCTGCACACCTACTCCCAGGCCACCTTCCCAGGCCCCCTGCAGCCTTTCTTCTGCCTGGGGGCT
CCGAAGTCTGGTCAGATGGTCATCTCCACAGTGACCATGTGGGTGAAAGGATAGACACAGACCGGGGGACTCGGGCACTGCTCCTGGCTCTGCAGAAGGT
GTGGGCCTTCTGCTTACTGCAGGCCACCTGCCAGGGTTCTCTGGCATCACGCTGGCAGCCATTAGACACACAGGGGGGTTTCTCAAATTCTAAATATAAT
TGTGATTAGAACTGTCAAACATTAAGAGGGTATACTGACAGATGCTTCCTAGAGGAAACTTTTGAAAGCCCCTGCGTTCTGAGTGGACCGATTTCTAAAT
CCATACCTACACACC
- refseq_TRIM17.F1 (forward primer)
- refseq_TRIM17.R1 (reverse primer)
- Alternative acceptor
Frame 0
HAPGRAAASWASWGQTQPFPAASARPGALGAVRAPLPRGAMEAVELARKLQEEATCSICLDYFTDPV
MTTCGHNFCRACIQLSWEKARGKKGRRKRKGSF
PCPECREMSPQRNLLPNRLLTKVAEMAQQHPGL
QKQDLCQEHHEPLKLFCQKDQSPICVVCRESREH
RLHRVLPAEEAVQGYKLKLEEDMEYLREQITRT
GNLQAREEQSLAEWQGKVKERRERIVLEFEKMN
LYLVEEEQRLLQALETEEEETASRLRESVACLDR
QGHSLELLLLQLEERSTQGPLQMLQDMKEPLSR
KNNVSVQCPEVAPPTRPRTVCRVPGQIEVLRGF
LEDVVPDATSAYPYLLLYESRQRRYLGSSPEGSG
FCSKDRFVAYPCAVGQTAFSSGRHYWEVGMNIT
GDALWALGVCRDNVSRKDRVPKCPENGFWVVQL
SKGTKYLSTFSALTPVMLMEPPSHMGIFLDFEAG
EVSFYSVSDGSHLHTYSQATFPGPLQPFFCLGA
PKSGQMVISTVTMWVKG*TQTGGLGHCSWLCRR
CGPSAYCRPPARVLWHHAGSH*THRGVSQILNII
VIRTVKH*EGILTDAS*RKLLKAPAF*VDRFLN
PYLHT
Frame 1
TPRAGPQPPGLRGGRPSLSRQRALGQVH*ALCGPPFPAEPWRLWNSPENCRRKLRAPSVWITSQTL
**PPVATTSAEPASS*AGKRRGARRGGGSGRAPS
PAPSAERCPRRGTCCPTGC*PRWPRWRSSILVC
RSKTCARSTTSPSSFSARRTRAPSVWCAGSPGS
TGCTGCCPPRRQCRGTS*SWRRTWSTFGSRSPGQ
GICRPGRSRA*PSGRAR*RSGENALCWSLRR*T
STWWKKSRGSSRLWRRKKRRLPAGSGRAWPAWT
GRVTLWSCCCCSWRSGAHRGPSRCCRT*RNP*AG
RTT*VCSAQRLPPQPDPGLCAEFPDRLKC*EAF
*RMWCLMPPPRTPTSSCMRAARGATSALRRRAV
GSAARTDLWLTPVLWARRPSPLGGTTGRWA*TSP
GTRCGPWVCAGTT*AGKTGSPSAPKTASGWCSC
PRGPSTYPPSLP*PRSC*WSLPATWASSWTSKP
GKCPSTV*AMGPTCTPTPRPPSQAPCSLSSAWGL
RSLVRWSSPQ*PCG*KDRHRPGDSGTAPGSAEG
VGLLLTAGHLPGFSGITLAAIRHTGGFLKF*I*
L*LELSNIKRVY*QMLPRGNF*KPLRSEWTDF*I
HTYT
Frame 2
RPGPGRSLLGFVGADPAFPGSERSARCTRRCAGPPSPRSHGGCGTRQKTAGGSYVLHLSGLLHRPC
DDHLWPQLLPSLHPAELGKGEGQEGEAEAEGLL
PLPRVQRDVPAEEPAAQPAADQGGRDGAAASWSA
EARPVPGAPRAPQAFLPEGPEPHLCGVQGVPGA
PAAQGAARRGGSAGVQVEAGGGHGVPSGADHQD
RESAGQGGAELSRVAGQGEGAERTHCAGV*EDEP
LPGGRRAEAPPGSGDGRRGDCQQAPGERGLPGP
AGSLSGAAAAAAGGAEHTGAPPDAAGHEGTPEQ
EEQRECAVPRGCPPNQTQDCVQSSRTD*SAKRLS
RGCGA*CHLRVPLPPPV*EPPEALPRLFAGGQW
VLQQGPICGLPLCCGPDGLLLWEALLGGGHEHH
RGRVVGPGCVQGQREPERQGPQVPRKRLLGGAAV
QGDQVLIHLLCPNPGHADGASQPHGHLPGLRSR
GSVLLQCKRWVPPAHLLPGHLPRPPAAFLLPGG
SEVWSDGHLHSDHVGERIDTDRGTRALLLALQKV
WAFCLLQATCQGSLASRWQPLDTQGGFSNSKYN
CD*NCQTLRGYTDRCFLEETFESPCVLSGPISK
SIPTH
Sequence NM_016102
CACGCCCCGGGCCGGGCCGCAGCCTCCTGGGCTTCGTGGGGGCAGACCCAGCCTTTCCCGGCAGCGAGCGCTCGGCCAGGTGCACTAGGCGCTGTGCGGGCCCCCCTTCCCCGCGAGTCCCTCAAGCGGGAACCTGCCTCGTGTCTCCCAGGAGCCATGGAGGCTGTGGAACTCGCCAGAAAACTGCAGGAGGAAGCTAC
GTGCTCCATCTGTCTGGATTACTTCACAGACCCTGTGATGACCACCTGTGGCCACAACTTCTGCCGAGCCTGCATCCAGCTGAGCTGGGAAAAGGCGAGG
GGCAAGAAGGGGAGGCGGAAGCGGAAGGGCTCCTTCCCCTGCCCCGAGTGCAGAGAGATGTCCCCGCAGAGGAACCTGCTGCCCAACCGGCTGCTGACCA
AGGTGGCCGAGATGGCGCAGCAGCATCCTGGTCTGCAGAAGCAAGACCTGTGCCAGGAGCACCACGAGCCCCTCAAGCTTTTCTGCCAGAAGGACCAGAG
CCCCATCTGTGTGGTGTGCAGGGAGTCCCGGGAGCACCGGCTGCACAGGGTGCTGCCCGCCGAGGAGGCAGTGCAGGGGTACAAGTTGAAGCTGGAGGAG
GACATGGAGTACCTTCGGGAGCAGATCACCAGGACAGGGAATCTGCAGGCCAGGGAGGAGCAGAGCTTAGCCGAGTGGCAGGGCAAGGTGAAGGAGCGGA
GAGAACGCATTGTGCTGGAGTTTGAGAAGATGAACCTCTACCTGGTGGAAGAAGAGCAGAGGCTCCTCCAGGCTCTGGAGACGGAAGAAGAGGAGACTGC
CAGCAGGCTCCGGGAGAGCGTGGCCTGCCTGGACCGGCAGGGTCACTCTCTGGAGCTGCTGCTGCTGCAGCTGGAGGAGCGGAGCACACAGGGGCCCCTC
CAGATGCTGCAGGACATGAAGGAACCCCTGAGCAGGAAGAACAACGTGAGTGTGCAGTGCCCAGAGGTTGCCCCCCCAACCAGACCCAGGACTGTGTGCA
GAGTTCCCGGACAGATTGAAGTGCTAAGAGGCTTTCTAGAGGATGTGGTGCCTGATGCCACCTCCGCGTACCCCTACCTCCTCCTGTATGAGAGCCGCCA
GAGGCGCTACCTCGGCTCTTCGCCGGAGGGCAGTGGGTTCTGCAGCAAGGACCGATTTGTGGCTTACCCCTGTGCTGTGGGCCAGACGGCCTTCTCCTCT
GGGAGGCACTACTGGGAGGTGGGCATGAACATCACCGGGGACGCGTTGTGGGCCCTGGGTGTGTGCAGGGACAACGTGAGCCGGAAAGACAGGGTCCCCA
AGTGCCCCGAAAACGGCTTCTGGGTGGTGCAGCTGTCCAAGGGGACCAAGTACTTATCCACCTTCTCTGCCCTAACCCCGGTCATGCTGATGGAGCCTCC
CAGCCACATGGGCATCTTCCTGGACTTCGAAGCCGGGGAAGTGTCCTTCTACAGTGTAAGCGATGGGTCCCACCTGCACACCTACTCCCAGGCCACCTTC
CCAGGCCCCCTGCAGCCTTTCTTCTGCCTGGGGGCTCCGAAGTCTGGTCAGATGGTCATCTCCACAGTGACCATGTGGGTGAAAGGATAGACACAGACCG
GGGGACTCGGGCACTGCTCCTGGCTCTGCAGAAGGTGTGGGCCTTCTGCTTACTGCAGGCCACCTGCCAGGGTTCTCTGGCATCACGCTGGCAGCCATTA
GACACACAGGGGGGTTTCTCAAATTCTAAATATAATTGTGATTAGAACTGTCAAACATTAAGAGGGTATACTGACAGATGCTTCCTAGAGGAAACTTTTG
AAAGCCCCTGCGTTCTGAGTGGACCGATTTCTAAATCCATACCTACACACC
- refseq_TRIM17.F1 (forward primer)
- refseq_TRIM17.R1 (reverse primer)
- Alternative acceptor
Frame 0
HAPGRAAASWASWGQTQPFPAASARPGALGAVRAPLPRESLKREPASCLPGAMEAVELARKLQEEAT
CSICLDYFTDPVMTTCGHNFCRACIQLSWEKAR
GKKGRRKRKGSFPCPECREMSPQRNLLPNRLLT
KVAEMAQQHPGLQKQDLCQEHHEPLKLFCQKDQS
PICVVCRESREHRLHRVLPAEEAVQGYKLKLEE
DMEYLREQITRTGNLQAREEQSLAEWQGKVKER
RERIVLEFEKMNLYLVEEEQRLLQALETEEEETA
SRLRESVACLDRQGHSLELLLLQLEERSTQGPL
QMLQDMKEPLSRKNNVSVQCPEVAPPTRPRTVC
RVPGQIEVLRGFLEDVVPDATSAYPYLLLYESRQ
RRYLGSSPEGSGFCSKDRFVAYPCAVGQTAFSS
GRHYWEVGMNITGDALWALGVCRDNVSRKDRVP
KCPENGFWVVQLSKGTKYLSTFSALTPVMLMEPP
SHMGIFLDFEAGEVSFYSVSDGSHLHTYSQATF
PGPLQPFFCLGAPKSGQMVISTVTMWVKG*TQT
GGLGHCSWLCRRCGPSAYCRPPARVLWHHAGSH*
THRGVSQILNIIVIRTVKH*EGILTDAS*RKLL
KAPAF*VDRFLNPYLHT
Frame 1
TPRAGPQPPGLRGGRPSLSRQRALGQVH*ALCGPPFPASPSSGNLPRVSQEPWRLWNSPENCRRKL
RAPSVWITSQTL**PPVATTSAEPASS*AGKRRG
ARRGGGSGRAPSPAPSAERCPRRGTCCPTGC*P
RWPRWRSSILVCRSKTCARSTTSPSSFSARRTR
APSVWCAGSPGSTGCTGCCPPRRQCRGTS*SWRR
TWSTFGSRSPGQGICRPGRSRA*PSGRAR*RSG
ENALCWSLRR*TSTWWKKSRGSSRLWRRKKRRL
PAGSGRAWPAWTGRVTLWSCCCCSWRSGAHRGPS
RCCRT*RNP*AGRTT*VCSAQRLPPQPDPGLCA
EFPDRLKC*EAF*RMWCLMPPPRTPTSSCMRAA
RGATSALRRRAVGSAARTDLWLTPVLWARRPSPL
GGTTGRWA*TSPGTRCGPWVCAGTT*AGKTGSP
SAPKTASGWCSCPRGPSTYPPSLP*PRSC*WSL
PATWASSWTSKPGKCPSTV*AMGPTCTPTPRPPS
QAPCSLSSAWGLRSLVRWSSPQ*PCG*KDRHRP
GDSGTAPGSAEGVGLLLTAGHLPGFSGITLAAI
RHTGGFLKF*I*L*LELSNIKRVY*QMLPRGNF*
KPLRSEWTDF*IHTYT
Frame 2
RPGPGRSLLGFVGADPAFPGSERSARCTRRCAGPPSPRVPQAGTCLVSPRSHGGCGTRQKTAGGSY
VLHLSGLLHRPCDDHLWPQLLPSLHPAELGKGE
GQEGEAEAEGLLPLPRVQRDVPAEEPAAQPAADQ
GGRDGAAASWSAEARPVPGAPRAPQAFLPEGPE
PHLCGVQGVPGAPAAQGAARRGGSAGVQVEAGG
GHGVPSGADHQDRESAGQGGAELSRVAGQGEGAE
RTHCAGV*EDEPLPGGRRAEAPPGSGDGRRGDC
QQAPGERGLPGPAGSLSGAAAAAAGGAEHTGAP
PDAAGHEGTPEQEEQRECAVPRGCPPNQTQDCVQ
SSRTD*SAKRLSRGCGA*CHLRVPLPPPV*EPP
EALPRLFAGGQWVLQQGPICGLPLCCGPDGLLL
WEALLGGGHEHHRGRVVGPGCVQGQREPERQGPQ
VPRKRLLGGAAVQGDQVLIHLLCPNPGHADGAS
QPHGHLPGLRSRGSVLLQCKRWVPPAHLLPGHL
PRPPAAFLLPGGSEVWSDGHLHSDHVGERIDTDR
GTRALLLALQKVWAFCLLQATCQGSLASRWQPL
DTQGGFSNSKYNCD*NCQTLRGYTDRCFLEETF
ESPCVLSGPISKSIPTH
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