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Sequences

Sequence NM_004620

AGCAGAGAAGGCGGAAGCAGTGGCGTCCGCAGCTGGGGCTTGGCCTGCGGGCGGCCAGCGAAGGTGGCGAAGGCTCCCACTGGATCCAGAGTTTGCCGTC
CAAGCAGCCTCGTCTCGGCGCGCAGTGTCTGTGTCCGTCCTCTACCAGCGCCTTGGCTGAGCGGAGTCGTGCGGTTGGTGGGGGAGCCCTGCCCTCCTGG
TTCGGCCTCCCCGCGCACTAGAACGAGCAAGTGATAATCAAGTTACTATGAGTCTGCTAAACTGTGAAAACAGCTGTGGATCCAGCCAGTCTGAAAGTGA
CTGCTGTGTGGCCATGGCCAGCTCCTGTAGCGCTGTAACAAAAGATGATAGTGTGGGTGGAACTGCCAGCACGGGGAACCTCTCCAGCTCATTTATGGAG
GAGATCCAGGGATATGATGTAGAGTTTGACCCACCCCTGGAAAGCAAGTATGAATGCCCCATCTGCTTGATGGCATTACGAGAAGCAGTGCAAACGCCAT
GCGGCCATAGGTTCTGCAAAGCCTGCATCATAAAATCAATAAGGGATGCAGGTCACAAATGTCCAGTTGACAATGAAATACTGCTGGAAAATCAACTATT
TCCAGACAATTTTGCAAAACGTGAGATTCTTTCTCTGATGGTGAAATGTCCAAATGAAGGTTGTTTGCACAAGATGGAACTGAGACATCTTGAGGATCAT
CAAGCACATTGTGAGTTTGCTCTTATGGATTGTCCCCAATGCCAGCGTCCCTTCCAAAAATTCCATATTAATATTCACATTCTGAAGGATTGTCCAAGGA
GACAGGTTTCTTGTGACAACTGTGCTGCATCAATGGCATTTGAAGATAAAGAGATCCATGACCAGAACTGTCCTTTGGCAAATGTCATCTGTGAATACTG
CAATACTATACTCATCAGAGAACAGATGCCTAATCATTATGATCTAGACTGCCCTACAGCCCCAATTCCATGCACATTCAGTACTTTTGGTTGCCATGAA
AAGATGCAGAGGAATCACTTGGCACGCCACCTACAAGAGAACACCCAGTCACACATGAGAATGTTGGCCCAGGCTGTTCATAGTTTGAGCGTTATACCCG
ACTCTGGGTATATCTCAGAGGTCCGGAATTTCCAGGAAACTATTCACCAGTTAGAGGGTCGCCTTGTAAGACAAGACCATCAAATCCGGGAGCTGACTGC
TAAAATGGAAACTCAGAGTATGTATGTAAGTGAGCTCAAACGAACCATTCGAACCCTTGAGGACAAAGTTGCTGAAATCGAAGCACAGCAGTGCAATGGA
ATTTATATTTGGAAGATTGGCAACTTTGGAATGCATTTGAAATGTCAAGAAGAGGAGAAACCTGTTGTGATTCATAGCCCTGGATTCTACACTGGCAAAC
CCGGGTACAAACTGTGCATGCGCTTGCACCTTCAGTTACCGACTGCTCAGCGCTGTGCAAACTATATATCCCTTTTTGTCCACACAATGCAAGGAGAATA
TGACAGCCACCTCCCTTGGCCCTTCCAGGGTACAATACGCCTTACAATTCTTGATCAGTCTGAAGCACCTGTAAGGCAAAACCACGAAGAGATAATGGAT
GCCAAACCAGAGCTGCTTGCTTTCCAGCGACCCACAATCCCACGGAACCCAAAAGGTTTTGGCTATGTAACTTTTATGCATCTGGAAGCCCTAAGACAAA
GAACTTTCATTAAGGATGACACATTATTAGTGCGCTGTGAGGTCTCCACCCGCTTTGACATGGGTAGCCTTCGGAGGGAGGGTTTTCAGCCACGAAGTAC
TGATGCAGGGGTATAGCTTGCCCTCACTTGCTCAAAAACAACTACCTGGAGAAAACAGTGCCTTTCCTTGCCCTGTTCTCAATAACATGCAAACAAACAA
GCCACGGGAAATATGTAATATCTACTAGTGAGTGTTGTTAGAGAGGTCACTTACTATTTCTTCCTGTTACAAATGATCTGAGGCAGTTTTTTCCTGGGAA
TCCACACGTTCCATGCTTTTTCAGAAATGTTAGGCCTGAAGTGCCTGTGGCATGTTGCAGCAGCTATTTTGCCAGTTAGTATACCTCTTTGTTGTACTTT
CTTGGGCTTTTGCTCTGGTGTATTTTATTGTCAGAAAGTCCAGACTCAAGAGTACTAAACTTTTAATAATAATGGATTTTCCTTAAAACTTCAGTCTTTT
TGTAGTATTATATGTAATATATTAAAAGTGAAAATCACTACCGCCTTGTGCTAGTGCCCTCGAGAAGAGTTATTGCTCTAGAAAGTTGAGTTCTCATTTT
TTTAACCTGTTATAGATTTCAGAGGATTTGAACCATAATCCTTGGAAAACTTAAGTTCTCATTCACCCCAGTTTTTCCTCCAGGTTGTTACTAAGGATAT
TCAGGGATGAGTTTAAACCCTAAATATAACCTTAATTATTTAGTGTAAACATGTCTGTTGAATAATACTTGTTTAAGT
  • refseq_TRAF6.F2 (forward primer)
  • refseq_TRAF6.R2 (reverse primer)
  • Single exon skipping

Frame 0

SREGGSSGVRSWGLACGRPAKVAKAPTGSRVCR
PSSLVSARSVCVRPLPAPWLSGVVRLVGEPCPPG
SASPRTRTSK**SSYYESAKL*KQLWIQPV*K*
LLCGHGQLL*RCNKR**CGWNCQHGEPLQLIYG
GDPGI*CRV*PTPGKQV*MPHLLDGITRSSANAM
RP*VLQSLHHKINKGCRSQMSS*Q*NTAGKSTI
SRQFCKT*DSFSDGEMSK*RLFAQDGTETS*GS
SSTL*VCSYGLSPMPASLPKIPY*YSHSEGLSKE
TGFL*QLCCINGI*R*RDP*PELSFGKCHL*IL
QYYTHQRTDA*SL*SRLPYSPNSMHIQYFWLP*
KDAEESLGTPPTREHPVTHENVGPGCS*FERYTR
LWVYLRGPEFPGNYSPVRGSPCKTRPSNPGADC
*NGNSEYVCK*AQTNHSNP*GQSC*NRSTAVQW
NLYLEDWQLWNAFEMSRRGETCCDS*PWILHWQT
RVQTVHALAPSVTDCSALCKLYIPFCPHNARRI
*QPPPLALPGYNTPYNS*SV*STCKAKPRRDNG
CQTRAACFPATHNPTEPKRFWLCNFYASGSPKTK
NFH*G*HIISAL*GLHPL*HG*PSEGGFSATKY
*CRGIACPHLLKNNYLEKTVPFLALFSITCKQT
SHGKYVISTSECC*RGHLLFLPVTNDLRQFFPGN
PHVPCFFRNVRPEVPVACCSSYFAS*YTSLLYF
LGLLLWCILLSESPDSRVLNF***WIFLKTSVF
L*YYM*YIKSENHYRLVLVPSRRVIALES*VLIF
LTCYRFQRI*TIILGKLKFSFTPVFPPGCY*GY
SGMSLNPKYNLNYLV*TCLLNNTCLS

Frame 1

AEKAEAVASAAGAWPAGGQRRWRRLPLDPEFAV
QAASSRRAVSVSVLYQRLG*AESCGWWGSPALL
VRPPRALERASDNQVTMSLLNCENSCGSSQSESD
CCVAMASSCSAVTKDDSVGGTASTGNLSSSFME
EIQGYDVEFDPPLESKYECPICLMALREAVQTP
CGHRFCKACIIKSIRDAGHKCPVDNEILLENQLF
PDNFAKREILSLMVKCPNEGCLHKMELRHLEDH
QAHCEFALMDCPQCQRPFQKFHINIHILKDCPR
RQVSCDNCAASMAFEDKEIHDQNCPLANVICEYC
NTILIREQMPNHYDLDCPTAPIPCTFSTFGCHE
KMQRNHLARHLQENTQSHMRMLAQAVHSLSVIP
DSGYISEVRNFQETIHQLEGRLVRQDHQIRELTA
KMETQSMYVSELKRTIRTLEDKVAEIEAQQCNG
IYIWKIGNFGMHLKCQEEEKPVVIHSPGFYTGK
PGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEY
DSHLPWPFQGTIRLTILDQSEAPVRQNHEEIMD
AKPELLAFQRPTIPRNPKGFGYVTFMHLEALRQ
RTFIKDDTLLVRCEVSTRFDMGSLRREGFQPRST
DAGV*LALTCSKTTTWRKQCLSLPCSQ*HANKQ
ATGNM*YLLVSVVREVTYYFFLLQMI*GSFFLG
IHTFHAFSEMLGLKCLWHVAAAILPVSIPLCCTF
LGFCSGVFYCQKVQTQEY*TFNNNGFSLKLQSF
CSIICNILKVKITTALC*CPREELLL*KVEFSF
F*PVIDFRGFEP*SLENLSSHSPQFFLQVVTKDI
QG*V*TLNITLII*CKHVC*IILV*

Frame 2

QRRRKQWRPQLGLGLRAASEGGEGSHWIQSLPS
KQPRLGAQCLCPSSTSALAERSRAVGGGALPSW
FGLPAH*NEQVIIKLL*VC*TVKTAVDPASLKV
TAVWPWPAPVAL*QKMIVWVELPARGTSPAHLWR
RSRDMM*SLTHPWKASMNAPSA*WHYEKQCKRH
AAIGSAKPAS*NQ*GMQVTNVQLTMKYCWKINY
FQTILQNVRFFL*W*NVQMKVVCTRWN*DILRII
KHIVSLLLWIVPNASVPSKNSILIFTF*RIVQG
DRFLVTTVLHQWHLKIKRSMTRTVLWQMSSVNT
AILYSSENRCLIIMI*TALQPQFHAHSVLLVAMK
RCRGITWHATYKRTPSHT*ECWPRLFIV*ALYP
TLGISQRSGISRKLFTS*RVAL*DKTIKSGS*L
LKWKLRVCM*VSSNEPFEPLRTKLLKSKHSSAME
FIFGRLATLECI*NVKKRRNLL*FIALDSTLAN
PGTNCACACTFSYRLLSAVQTIYPFLSTQCKEN
MTATSLGPSRVQYALQFLISLKHL*GKTTKR*WM
PNQSCLLSSDPQSHGTQKVLAM*LLCIWKP*DK
ELSLRMTHY*CAVRSPPALTWVAFGGRVFSHEV
LMQGYSLPSLAQKQLPGENSAFPCPVLNNMQTNK
PREICNIY**VLLERSLTISSCYK*SEAVFSWE
STRSMLFQKC*A*SACGMLQQLFCQLVYLFVVL
SWAFALVYFIVRKSRLKSTKLLIIMDFP*NFSLF
VVLYVIY*K*KSLPPCASALEKSYCSRKLSSHF
FNLL*ISEDLNHNPWKT*VLIHPSFSSRLLLRI
FRDEFKP*I*P*LFSVNMSVE*YLFK

Sequence NM_145803

AGCAGAGAAGGCGGAAGCAGTGGCGTCCGCAGCTGGGGCTTGGCCTGCGGGCGGCCAGCGAAGGTGGCGAAGGCTCCCACTGGATCCAGAGTTTGCCGTC
CAAGCAGCCTCGTCTCGGCGCGCAGTGTCTGTGTCCGTCCTCTACCAGCGCCTTGGCTGAGCGGAGTCGTGCGGTTGGTGGGGGAGCCCTGCCCTCCTGG
TTCGGCCTCCCCGCGCACTAGAACGATCATGAACTTCTGAAGGGACCCAGCTTTCTTTGTGTGCTCCAAGTGATTTGCACAAATAATAATATATATATTT
ATTGAAGGAGAGAATCAGAGCAAGTGATAATCAAGTTACTATGAGTCTGCTAAACTGTGAAAACAGCTGTGGATCCAGCCAGTCTGAAAGTGACTGCTGT
GTGGCCATGGCCAGCTCCTGTAGCGCTGTAACAAAAGATGATAGTGTGGGTGGAACTGCCAGCACGGGGAACCTCTCCAGCTCATTTATGGAGGAGATCC
AGGGATATGATGTAGAGTTTGACCCACCCCTGGAAAGCAAGTATGAATGCCCCATCTGCTTGATGGCATTACGAGAAGCAGTGCAAACGCCATGCGGCCA
TAGGTTCTGCAAAGCCTGCATCATAAAATCAATAAGGGATGCAGGTCACAAATGTCCAGTTGACAATGAAATACTGCTGGAAAATCAACTATTTCCAGAC
AATTTTGCAAAACGTGAGATTCTTTCTCTGATGGTGAAATGTCCAAATGAAGGTTGTTTGCACAAGATGGAACTGAGACATCTTGAGGATCATCAAGCAC
ATTGTGAGTTTGCTCTTATGGATTGTCCCCAATGCCAGCGTCCCTTCCAAAAATTCCATATTAATATTCACATTCTGAAGGATTGTCCAAGGAGACAGGT
TTCTTGTGACAACTGTGCTGCATCAATGGCATTTGAAGATAAAGAGATCCATGACCAGAACTGTCCTTTGGCAAATGTCATCTGTGAATACTGCAATACT
ATACTCATCAGAGAACAGATGCCTAATCATTATGATCTAGACTGCCCTACAGCCCCAATTCCATGCACATTCAGTACTTTTGGTTGCCATGAAAAGATGC
AGAGGAATCACTTGGCACGCCACCTACAAGAGAACACCCAGTCACACATGAGAATGTTGGCCCAGGCTGTTCATAGTTTGAGCGTTATACCCGACTCTGG
GTATATCTCAGAGGTCCGGAATTTCCAGGAAACTATTCACCAGTTAGAGGGTCGCCTTGTAAGACAAGACCATCAAATCCGGGAGCTGACTGCTAAAATG
GAAACTCAGAGTATGTATGTAAGTGAGCTCAAACGAACCATTCGAACCCTTGAGGACAAAGTTGCTGAAATCGAAGCACAGCAGTGCAATGGAATTTATA
TTTGGAAGATTGGCAACTTTGGAATGCATTTGAAATGTCAAGAAGAGGAGAAACCTGTTGTGATTCATAGCCCTGGATTCTACACTGGCAAACCCGGGTA
CAAACTGTGCATGCGCTTGCACCTTCAGTTACCGACTGCTCAGCGCTGTGCAAACTATATATCCCTTTTTGTCCACACAATGCAAGGAGAATATGACAGC
CACCTCCCTTGGCCCTTCCAGGGTACAATACGCCTTACAATTCTTGATCAGTCTGAAGCACCTGTAAGGCAAAACCACGAAGAGATAATGGATGCCAAAC
CAGAGCTGCTTGCTTTCCAGCGACCCACAATCCCACGGAACCCAAAAGGTTTTGGCTATGTAACTTTTATGCATCTGGAAGCCCTAAGACAAAGAACTTT
CATTAAGGATGACACATTATTAGTGCGCTGTGAGGTCTCCACCCGCTTTGACATGGGTAGCCTTCGGAGGGAGGGTTTTCAGCCACGAAGTACTGATGCA
GGGGTATAGCTTGCCCTCACTTGCTCAAAAACAACTACCTGGAGAAAACAGTGCCTTTCCTTGCCCTGTTCTCAATAACATGCAAACAAACAAGCCACGG
GAAATATGTAATATCTACTAGTGAGTGTTGTTAGAGAGGTCACTTACTATTTCTTCCTGTTACAAATGATCTGAGGCAGTTTTTTCCTGGGAATCCACAC
GTTCCATGCTTTTTCAGAAATGTTAGGCCTGAAGTGCCTGTGGCATGTTGCAGCAGCTATTTTGCCAGTTAGTATACCTCTTTGTTGTACTTTCTTGGGC
TTTTGCTCTGGTGTATTTTATTGTCAGAAAGTCCAGACTCAAGAGTACTAAACTTTTAATAATAATGGATTTTCCTTAAAACTTCAGTCTTTTTGTAGTA
TTATATGTAATATATTAAAAGTGAAAATCACTACCGCCTTGTGCTAGTGCCCTCGAGAAGAGTTATTGCTCTAGAAAGTTGAGTTCTCATTTTTTTAACC
TGTTATAGATTTCAGAGGATTTGAACCATAATCCTTGGAAAACTTAAGTTCTCATTCACCCCAGTTTTTCCTCCAGGTTGTTACTAAGGATATTCAGGGA
TGAGTTTAAACCCTAAATATAACCTTAATTATTTAGTGTAAACATGTCTGTTGAATAATACTTGTTTAAGT
  • refseq_TRAF6.F2 (forward primer)
  • refseq_TRAF6.R2 (reverse primer)
  • Single exon skipping

Frame 0

SREGGSSGVRSWGLACGRPAKVAKAPTGSRVCR
PSSLVSARSVCVRPLPAPWLSGVVRLVGEPCPPG
SASPRTRTIMNF*RDPAFFVCSK*FAQIIIYIF
IEGENQSK**SSYYESAKL*KQLWIQPV*K*LL
CGHGQLL*RCNKR**CGWNCQHGEPLQLIYGGDP
GI*CRV*PTPGKQV*MPHLLDGITRSSANAMRP
*VLQSLHHKINKGCRSQMSS*Q*NTAGKSTISR
QFCKT*DSFSDGEMSK*RLFAQDGTETS*GSSST
L*VCSYGLSPMPASLPKIPY*YSHSEGLSKETG
FL*QLCCINGI*R*RDP*PELSFGKCHL*ILQY
YTHQRTDA*SL*SRLPYSPNSMHIQYFWLP*KDA
EESLGTPPTREHPVTHENVGPGCS*FERYTRLW
VYLRGPEFPGNYSPVRGSPCKTRPSNPGADC*N
GNSEYVCK*AQTNHSNP*GQSC*NRSTAVQWNLY
LEDWQLWNAFEMSRRGETCCDS*PWILHWQTRV
QTVHALAPSVTDCSALCKLYIPFCPHNARRI*Q
PPPLALPGYNTPYNS*SV*STCKAKPRRDNGCQT
RAACFPATHNPTEPKRFWLCNFYASGSPKTKNF
H*G*HIISAL*GLHPL*HG*PSEGGFSATKY*C
RGIACPHLLKNNYLEKTVPFLALFSITCKQTSHG
KYVISTSECC*RGHLLFLPVTNDLRQFFPGNPH
VPCFFRNVRPEVPVACCSSYFAS*YTSLLYFLG
LLLWCILLSESPDSRVLNF***WIFLKTSVFL*Y
YM*YIKSENHYRLVLVPSRRVIALES*VLIFLT
CYRFQRI*TIILGKLKFSFTPVFPPGCY*GYSG
MSLNPKYNLNYLV*TCLLNNTCLS

Frame 1

AEKAEAVASAAGAWPAGGQRRWRRLPLDPEFAV
QAASSRRAVSVSVLYQRLG*AESCGWWGSPALL
VRPPRALERS*TSEGTQLSLCAPSDLHK**YIYL
LKERIRASDNQVTMSLLNCENSCGSSQSESDCC
VAMASSCSAVTKDDSVGGTASTGNLSSSFMEEI
QGYDVEFDPPLESKYECPICLMALREAVQTPCGH
RFCKACIIKSIRDAGHKCPVDNEILLENQLFPD
NFAKREILSLMVKCPNEGCLHKMELRHLEDHQA
HCEFALMDCPQCQRPFQKFHINIHILKDCPRRQV
SCDNCAASMAFEDKEIHDQNCPLANVICEYCNT
ILIREQMPNHYDLDCPTAPIPCTFSTFGCHEKM
QRNHLARHLQENTQSHMRMLAQAVHSLSVIPDSG
YISEVRNFQETIHQLEGRLVRQDHQIRELTAKM
ETQSMYVSELKRTIRTLEDKVAEIEAQQCNGIY
IWKIGNFGMHLKCQEEEKPVVIHSPGFYTGKPGY
KLCMRLHLQLPTAQRCANYISLFVHTMQGEYDS
HLPWPFQGTIRLTILDQSEAPVRQNHEEIMDAK
PELLAFQRPTIPRNPKGFGYVTFMHLEALRQRTF
IKDDTLLVRCEVSTRFDMGSLRREGFQPRSTDA
GV*LALTCSKTTTWRKQCLSLPCSQ*HANKQAT
GNM*YLLVSVVREVTYYFFLLQMI*GSFFLGIHT
FHAFSEMLGLKCLWHVAAAILPVSIPLCCTFLG
FCSGVFYCQKVQTQEY*TFNNNGFSLKLQSFCS
IICNILKVKITTALC*CPREELLL*KVEFSFF*P
VIDFRGFEP*SLENLSSHSPQFFLQVVTKDIQG
*V*TLNITLII*CKHVC*IILV*

Frame 2

QRRRKQWRPQLGLGLRAASEGGEGSHWIQSLPS
KQPRLGAQCLCPSSTSALAERSRAVGGGALPSW
FGLPAH*NDHELLKGPSFLCVLQVICTNNNIYI
Y*RRESEQVIIKLL*VC*TVKTAVDPASLKVTAV
WPWPAPVAL*QKMIVWVELPARGTSPAHLWRRS
RDMM*SLTHPWKASMNAPSA*WHYEKQCKRHAA
IGSAKPAS*NQ*GMQVTNVQLTMKYCWKINYFQT
ILQNVRFFL*W*NVQMKVVCTRWN*DILRIIKH
IVSLLLWIVPNASVPSKNSILIFTF*RIVQGDR
FLVTTVLHQWHLKIKRSMTRTVLWQMSSVNTAIL
YSSENRCLIIMI*TALQPQFHAHSVLLVAMKRC
RGITWHATYKRTPSHT*ECWPRLFIV*ALYPTL
GISQRSGISRKLFTS*RVAL*DKTIKSGS*LLKW
KLRVCM*VSSNEPFEPLRTKLLKSKHSSAMEFI
FGRLATLECI*NVKKRRNLL*FIALDSTLANPG
TNCACACTFSYRLLSAVQTIYPFLSTQCKENMTA
TSLGPSRVQYALQFLISLKHL*GKTTKR*WMPN
QSCLLSSDPQSHGTQKVLAM*LLCIWKP*DKEL
SLRMTHY*CAVRSPPALTWVAFGGRVFSHEVLMQ
GYSLPSLAQKQLPGENSAFPCPVLNNMQTNKPR
EICNIY**VLLERSLTISSCYK*SEAVFSWEST
RSMLFQKC*A*SACGMLQQLFCQLVYLFVVLSWA
FALVYFIVRKSRLKSTKLLIIMDFP*NFSLFVV
LYVIY*K*KSLPPCASALEKSYCSRKLSSHFFN
LL*ISEDLNHNPWKT*VLIHPSFSSRLLLRIFRD
EFKP*I*P*LFSVNMSVE*YLFK

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