Back to Rnomics Platform
Open Session
×
1 warning:
- Access restricted to public data.
Please sign in at Rnomics Platform to access your data.
Sequence NM_080687
CGGGGGCTGGCGGCTGCGGCTCGGCGGAGAGTGCGGCATGCGCTCGGAAAAGGAGGGGGCCGGAGGCCTTCGGGCGGCCGTTGCCGCGCGGGGCCCGAGCGGGAGGGAGAAGCTGTCGGCCCTAGAAGTGCAGTTCCACCGCGACTCGCAGCAGCAGGAGGCTGAGACGCCGCCAACTTCGTCCTCCGGTTGCGGGGGCG
GTGCGGGCAAACCTCGCGAGGAGAAGAGGACGGCCCTGAGCAAGGTGGTCATCCGCCGCCTGCCTCCGGGCCTCACCAAGGAGCAGCTGGAGGAGCAGCT
GCGCCCGCTGCCAGCACACGACTACTTCGAGTTCTTCGCCGCCGACCTGAGTCTTTATCCTCATCTCTACTCAAGAGCATACATTAATTTTAGGAATCCT
GATGACATCCTTCTTTTTAGAGATCGTTTTGATGGATATATCTTCCTTGACAGCAAAGATCCAGAATATAAGAAGTTTTTAGAAACCTACTGTGTGGAGG
AAGAGAAGACCAGTGCCAACCCTGAGACTCTGCTGGGGGAGATGGAGGCGAAGACAAGAGAGCTCATTGCTAGAAGAACCACACCTCTTTTGGAATATAT
TAAAAATAGAAAATTAGAAAAGCAGAGAATTCGAGAAGAGAAGCGAGAAGAACGGAGGAGGAGAGAGTTAGAAAAGAAACGTTTGCGGGAAGAGGAAAAA
AGAAGAAGAAGAGAAGAAGAAAGATGCAAAAAAAAAGAGACAGATAAACAGAAGAAAATTGCAGAGAAAGAAGTAAGGATTAAGCTTCTTAAGAAACCAG
AAAAGGGAGAGGAACCAACCACAGAGAAACCAAAAGAAAGAGGAGAGGAGATTGATACTGGAGGTGGCAAGCAGGAATCCTGTGCCCCCGGTGCAGTCGT
AAAAGCCAGGCCCATGGAAGGCTCGCTGGAGGAGCCCCAGGAGACGTCACACAGCGGCAGTGATAAAGAGCACAGGGATGTGGAGAGATCTCAAGAACAA
GAATCTGAAGCACAAAGATACCATGTGGATGACGGCAGGAGGCACAGAGCTCACCACGAGCCTGAACGGCTTTCCAGAAGGAGTGAGGATGAGCAGAGAT
GGGGGAAAGGACCTGGCCAAGACAGAGGGAAGAAGGGGAGCCAGGACAGCGGGGCTCCGGGGGAGGCCATGGAGAGACTGGGAAGAGCGCAGAGGTGTGA
CGACAGTCCAGCACCCAGAAAAGAGCGACTGGCAAACAAGGACCGGCCAGCCTTGCAGCTGTATGATCCAGGAGCTCGCTTCCGAGCGCGAGAGTGTGGC
GGAAACAGGAGGATCTGCAAGGCAGAAGGTTCGGGGACTGGTCCTGAGAAGAGGGAAGAGGCAGAGTGAGTCACTGCACGCACCTGGCCTCCATGGACGA
GCAAGGGCATCCCAGAAACGTGTAAATGACCCCGAGTGTGACTGGGAAGGAGAACTTATTCCTTACCAGGAAACTGGAAGCTAAAAATACAGAGGGTGAC
GTAGAAACACGCAGAAACCATTCTAAAGAAAGTAGTGATCTTGTATTAAATTGAGCAGAATTCTCACAGATTTTACCATTCCTGTTATAAACTAGTATTT
GTTGTTTAGCCAAAACAGAAAATGATTTCCACTGGACAGTAGAAAAATATGTGTAAAATAGGGAAGAAAGTTAGTATTGGATCAGTGTGAGTCCTGAAGC
ACTTTCAGTGCTGTGAGAACGACATCCACTTTGGGTTTCATTCGTTTGTAAGCAGAGGAGCTGTCAGTCACTCGTGCTTCTCGGTGGCCTCTGAGCCATG
GTGTCGAGTGAAGAGTAGTTCTTGTTTGTTACAACCTTTGTGAGTCAGCCATGCCCGCAAAGCGTGCTGTGTTTTAGTCCTGGTAGGAATATTTATCAGA
GTTCACACTATATAAAACCCAACAGCTTCAACTATTGCCCTTTCAACAGTTTTGCCACTGACCGGATAGAAACGGTTTCAGTCTCTGGATGGATGTGTTT
GTGGTTTGTAACCATTACGGTTTAAACCATGGTTTAAGAATTTGCCCAAATAACAGAAATTTTGTTCGGGAAGGGATAAACTAGATATAGCATACAGAGC
CTGTTTTTGAGTTTTAGATACTTTATTTGTAAATAACTTAAAATAGCTTTCTGAAACCGTGCATTCTGTAGTTTCTTCCTTTCAGTGAAATTGCTAAATG
TCAATGTATTTTTGGCACTGCGATTTTAACCATTTATTAAATAAAAATTTTGTTAAAGAA
- refseq_UPF3A.F1 (forward primer)
- refseq_UPF3A.R1 (reverse primer)
- Single exon skipping
Frame 0
RGLAAAARRRVRHALGKGGGRRPSGGRCRAGPEREGEAVGPRSAVPPRLAAAGG*DAANFVLRLRGR
CGQTSRGEEDGPEQGGHPPPASGPHQGAAGGAA
APAASTRLLRVLRRRPESLSSSLLKSIH*F*ES
**HPSF*RSF*WIYLP*QQRSRI*EVFRNLLCGG
REDQCQP*DSAGGDGGEDKRAHC*KNHTSFGIY
*K*KIRKAENSRREARRTEEERVRKETFAGRGK
KKKKRRRKMQKKRDR*TEENCRERSKD*AS*ETR
KGRGTNHRETKRKRRGD*YWRWQAGILCPRCSR
KSQAHGRLAGGAPGDVTQRQ**RAQGCGEISRT
RI*STKIPCG*RQEAQSSPRA*TAFQKE*G*AEM
GERTWPRQREEGEPGQRGSGGGHGETGKSAEV*
RQSSTQKRATGKQGPASLAAV*SRSSLPSARVW
RKQEDLQGRRFGDWS*EEGRGRVSHCTHLASMDE
QGHPRNV*MTPSVTGKENLFLTRKLEAKNTEGD
VETRRNHSKESSDLVLN*AEFSQILPFLL*TSI
CCLAKTENDFHWTVEKYV*NREES*YWISVSPEA
LSVL*ERHPLWVSFVCKQRSCQSLVLLGGL*AM
VSSEE*FLFVTTFVSQPCPQSVLCFSPGRNIYQ
SSHYIKPNSFNYCPFNSFATDRIETVSVSGWMCL
WFVTITV*TMV*EFAQITEILFGKG*TRYSIQS
LFLSFRYFICK*LKIAF*NRAFCSFFLSVKLLN
VNVFLALRF*PFIK*KFC*R
Frame 1
GGWRLRLGGECGMRSEKEGAGGLRAAVAARGPSGREKLSALEVQFHRDSQQQEAETPPTSSSGCGG
GAGKPREEKRTALSKVVIRRLPPGLTKEQLEEQL
RPLPAHDYFEFFAADLSLYPHLYSRAYINFRNP
DDILLFRDRFDGYIFLDSKDPEYKKFLETYCVE
EEKTSANPETLLGEMEAKTRELIARRTTPLLEYI
KNRKLEKQRIREEKREERRRRELEKKRLREEEK
RRRREEERCKKKETDKQKKIAEKEVRIKLLKKP
EKGEEPTTEKPKERGEEIDTGGGKQESCAPGAVV
KARPMEGSLEEPQETSHSGSDKEHRDVERSQEQ
ESEAQRYHVDDGRRHRAHHEPERLSRRSEDEQR
WGKGPGQDRGKKGSQDSGAPGEAMERLGRAQRCD
DSPAPRKERLANKDRPALQLYDPGARFRARECG
GNRRICKAEGSGTGPEKREEAE*VTARTWPPWT
SKGIPETCK*PRV*LGRRTYSLPGNWKLKIQRVT
*KHAETILKKVVILY*IEQNSHRFYHSCYKLVF
VV*PKQKMISTGQ*KNMCKIGKKVSIGSV*VLK
HFQCCENDIHFGFHSFVSRGAVSHSCFSVASEPW
CRVKSSSCLLQPL*VSHARKACCVLVLVGIFIR
VHTI*NPTASTIALSTVLPLTG*KRFQSLDGCV
CGL*PLRFKPWFKNLPK*QKFCSGRDKLDIAYRA
CF*VLDTLFVNNLK*LSETVHSVVSSFQ*NC*M
SMYFWHCDFNHLLNKNFVKE
Frame 2
GAGGCGSAESAACARKRRGPEAFGRPLPRGARAGGRSCRP*KCSSTATRSSRRLRRRQLRPPVAGA
VRANLARRRGRP*ARWSSAACLRASPRSSWRSS
CARCQHTTTSSSSPPT*VFILISTQEHTLILGIL
MTSFFLEIVLMDISSLTAKIQNIRSF*KPTVWR
KRRPVPTLRLCWGRWRRRQESSLLEEPHLFWNI
LKIEN*KSREFEKRSEKNGGGES*KRNVCGKRKK
EEEEKKKDAKKKRQINRRKLQRKK*GLSFLRNQ
KRERNQPQRNQKKEERRLILEVASRNPVPPVQS
*KPGPWKARWRSPRRRHTAAVIKSTGMWRDLKNK
NLKHKDTMWMTAGGTELTTSLNGFPEGVRMSRD
GGKDLAKTEGRRGARTAGLRGRPWRDWEERRGV
TTVQHPEKSDWQTRTGQPCSCMIQELASERESVA
ETGGSARQKVRGLVLRRGKRQSESLHAPGLHGR
ARASQKRVNDPECDWEGELIPYQETGS*KYRG*
RRNTQKPF*RK**SCIKLSRILTDFTIPVIN*YL
LFSQNRK*FPLDSRKICVK*GRKLVLDQCES*S
TFSAVRTTSTLGFIRL*AEELSVTRASRWPLSH
GVE*RVVLVCYNLCESAMPAKRAVF*SW*EYLSE
FTLYKTQQLQLLPFQQFCH*PDRNGFSLWMDVF
VVCNHYGLNHGLRICPNNRNFVREGIN*I*HTE
PVFEF*ILYL*IT*NSFLKPCIL*FLPFSEIAKC
QCIFGTAILTIY*IKILLK
Sequence NM_023011
CGGGGGCTGGCGGCTGCGGCTCGGCGGAGAGTGCGGCATGCGCTCGGAAAAGGAGGGGGCCGGAGGCCTTCGGGCGGCCGTTGCCGCGCGGGGCCCGAGCGGGAGGGAGAAGCTGTCGGCCCTAGAAGTGCAGTTCCACCGCGACTCGCAGCAGCAGGAGGCTGAGACGCCGCCAACTTCGTCCTCCGGTTGCGGGGGCG
GTGCGGGCAAACCTCGCGAGGAGAAGAGGACGGCCCTGAGCAAGGTGGTCATCCGCCGCCTGCCTCCGGGCCTCACCAAGGAGCAGCTGGAGGAGCAGCT
GCGCCCGCTGCCAGCACACGACTACTTCGAGTTCTTCGCCGCCGACCTGAGTCTTTATCCTCATCTCTACTCAAGAGCATACATTAATTTTAGGAATCCT
GATGACATCCTTCTTTTTAGAGATCGTTTTGATGGATATATCTTCCTTGACAGCAAAGGCCTAGAATATCCTGCAGTGGTAGAGTTTGCTCCATTCCAGA
AGATAGCCAAAAAGAAGCTGAGAAAAAAAGATGCCAAGACTGGAAGCATCGAAGATGATCCAGAATATAAGAAGTTTTTAGAAACCTACTGTGTGGAGGA
AGAGAAGACCAGTGCCAACCCTGAGACTCTGCTGGGGGAGATGGAGGCGAAGACAAGAGAGCTCATTGCTAGAAGAACCACACCTCTTTTGGAATATATT
AAAAATAGAAAATTAGAAAAGCAGAGAATTCGAGAAGAGAAGCGAGAAGAACGGAGGAGGAGAGAGTTAGAAAAGAAACGTTTGCGGGAAGAGGAAAAAA
GAAGAAGAAGAGAAGAAGAAAGATGCAAAAAAAAAGAGACAGATAAACAGAAGAAAATTGCAGAGAAAGAAGTAAGGATTAAGCTTCTTAAGAAACCAGA
AAAGGGAGAGGAACCAACCACAGAGAAACCAAAAGAAAGAGGAGAGGAGATTGATACTGGAGGTGGCAAGCAGGAATCCTGTGCCCCCGGTGCAGTCGTA
AAAGCCAGGCCCATGGAAGGCTCGCTGGAGGAGCCCCAGGAGACGTCACACAGCGGCAGTGATAAAGAGCACAGGGATGTGGAGAGATCTCAAGAACAAG
AATCTGAAGCACAAAGATACCATGTGGATGACGGCAGGAGGCACAGAGCTCACCACGAGCCTGAACGGCTTTCCAGAAGGAGTGAGGATGAGCAGAGATG
GGGGAAAGGACCTGGCCAAGACAGAGGGAAGAAGGGGAGCCAGGACAGCGGGGCTCCGGGGGAGGCCATGGAGAGACTGGGAAGAGCGCAGAGGTGTGAC
GACAGTCCAGCACCCAGAAAAGAGCGACTGGCAAACAAGGACCGGCCAGCCTTGCAGCTGTATGATCCAGGAGCTCGCTTCCGAGCGCGAGAGTGTGGCG
GAAACAGGAGGATCTGCAAGGCAGAAGGTTCGGGGACTGGTCCTGAGAAGAGGGAAGAGGCAGAGTGAGTCACTGCACGCACCTGGCCTCCATGGACGAG
CAAGGGCATCCCAGAAACGTGTAAATGACCCCGAGTGTGACTGGGAAGGAGAACTTATTCCTTACCAGGAAACTGGAAGCTAAAAATACAGAGGGTGACG
TAGAAACACGCAGAAACCATTCTAAAGAAAGTAGTGATCTTGTATTAAATTGAGCAGAATTCTCACAGATTTTACCATTCCTGTTATAAACTAGTATTTG
TTGTTTAGCCAAAACAGAAAATGATTTCCACTGGACAGTAGAAAAATATGTGTAAAATAGGGAAGAAAGTTAGTATTGGATCAGTGTGAGTCCTGAAGCA
CTTTCAGTGCTGTGAGAACGACATCCACTTTGGGTTTCATTCGTTTGTAAGCAGAGGAGCTGTCAGTCACTCGTGCTTCTCGGTGGCCTCTGAGCCATGG
TGTCGAGTGAAGAGTAGTTCTTGTTTGTTACAACCTTTGTGAGTCAGCCATGCCCGCAAAGCGTGCTGTGTTTTAGTCCTGGTAGGAATATTTATCAGAG
TTCACACTATATAAAACCCAACAGCTTCAACTATTGCCCTTTCAACAGTTTTGCCACTGACCGGATAGAAACGGTTTCAGTCTCTGGATGGATGTGTTTG
TGGTTTGTAACCATTACGGTTTAAACCATGGTTTAAGAATTTGCCCAAATAACAGAAATTTTGTTCGGGAAGGGATAAACTAGATATAGCATACAGAGCC
TGTTTTTGAGTTTTAGATACTTTATTTGTAAATAACTTAAAATAGCTTTCTGAAACCGTGCATTCTGTAGTTTCTTCCTTTCAGTGAAATTGCTAAATGT
CAATGTATTTTTGGCACTGCGATTTTAACCATTTATTAAATAAAAATTTTGTTAAAGAA
- refseq_UPF3A.F1 (forward primer)
- refseq_UPF3A.R1 (reverse primer)
- Single exon skipping
Frame 0
RGLAAAARRRVRHALGKGGGRRPSGGRCRAGPEREGEAVGPRSAVPPRLAAAGG*DAANFVLRLRGR
CGQTSRGEEDGPEQGGHPPPASGPHQGAAGGAA
APAASTRLLRVLRRRPESLSSSLLKSIH*F*ES
**HPSF*RSF*WIYLP*QQRPRISCSGRVCSIPE
DSQKEAEKKRCQDWKHRR*SRI*EVFRNLLCGG
REDQCQP*DSAGGDGGEDKRAHC*KNHTSFGIY
*K*KIRKAENSRREARRTEEERVRKETFAGRGKK
KKKRRRKMQKKRDR*TEENCRERSKD*AS*ETR
KGRGTNHRETKRKRRGD*YWRWQAGILCPRCSR
KSQAHGRLAGGAPGDVTQRQ**RAQGCGEISRTR
I*STKIPCG*RQEAQSSPRA*TAFQKE*G*AEM
GERTWPRQREEGEPGQRGSGGGHGETGKSAEV*
RQSSTQKRATGKQGPASLAAV*SRSSLPSARVWR
KQEDLQGRRFGDWS*EEGRGRVSHCTHLASMDE
QGHPRNV*MTPSVTGKENLFLTRKLEAKNTEGD
VETRRNHSKESSDLVLN*AEFSQILPFLL*TSIC
CLAKTENDFHWTVEKYV*NREES*YWISVSPEA
LSVL*ERHPLWVSFVCKQRSCQSLVLLGGL*AM
VSSEE*FLFVTTFVSQPCPQSVLCFSPGRNIYQS
SHYIKPNSFNYCPFNSFATDRIETVSVSGWMCL
WFVTITV*TMV*EFAQITEILFGKG*TRYSIQS
LFLSFRYFICK*LKIAF*NRAFCSFFLSVKLLNV
NVFLALRF*PFIK*KFC*R
Frame 1
GGWRLRLGGECGMRSEKEGAGGLRAAVAARGPSGREKLSALEVQFHRDSQQQEAETPPTSSSGCGG
GAGKPREEKRTALSKVVIRRLPPGLTKEQLEEQL
RPLPAHDYFEFFAADLSLYPHLYSRAYINFRNP
DDILLFRDRFDGYIFLDSKGLEYPAVVEFAPFQ
KIAKKKLRKKDAKTGSIEDDPEYKKFLETYCVEE
EKTSANPETLLGEMEAKTRELIARRTTPLLEYI
KNRKLEKQRIREEKREERRRRELEKKRLREEEK
RRRREEERCKKKETDKQKKIAEKEVRIKLLKKPE
KGEEPTTEKPKERGEEIDTGGGKQESCAPGAVV
KARPMEGSLEEPQETSHSGSDKEHRDVERSQEQ
ESEAQRYHVDDGRRHRAHHEPERLSRRSEDEQRW
GKGPGQDRGKKGSQDSGAPGEAMERLGRAQRCD
DSPAPRKERLANKDRPALQLYDPGARFRARECG
GNRRICKAEGSGTGPEKREEAE*VTARTWPPWTS
KGIPETCK*PRV*LGRRTYSLPGNWKLKIQRVT
*KHAETILKKVVILY*IEQNSHRFYHSCYKLVF
VV*PKQKMISTGQ*KNMCKIGKKVSIGSV*VLKH
FQCCENDIHFGFHSFVSRGAVSHSCFSVASEPW
CRVKSSSCLLQPL*VSHARKACCVLVLVGIFIR
VHTI*NPTASTIALSTVLPLTG*KRFQSLDGCVC
GL*PLRFKPWFKNLPK*QKFCSGRDKLDIAYRA
CF*VLDTLFVNNLK*LSETVHSVVSSFQ*NC*M
SMYFWHCDFNHLLNKNFVKE
Frame 2
GAGGCGSAESAACARKRRGPEAFGRPLPRGARAGGRSCRP*KCSSTATRSSRRLRRRQLRPPVAGA
VRANLARRRGRP*ARWSSAACLRASPRSSWRSS
CARCQHTTTSSSSPPT*VFILISTQEHTLILGIL
MTSFFLEIVLMDISSLTAKA*NILQW*SLLHSR
R*PKRS*EKKMPRLEASKMIQNIRSF*KPTVWR
KRRPVPTLRLCWGRWRRRQESSLLEEPHLFWNIL
KIEN*KSREFEKRSEKNGGGES*KRNVCGKRKK
EEEEKKKDAKKKRQINRRKLQRKK*GLSFLRNQ
KRERNQPQRNQKKEERRLILEVASRNPVPPVQS*
KPGPWKARWRSPRRRHTAAVIKSTGMWRDLKNK
NLKHKDTMWMTAGGTELTTSLNGFPEGVRMSRD
GGKDLAKTEGRRGARTAGLRGRPWRDWEERRGVT
TVQHPEKSDWQTRTGQPCSCMIQELASERESVA
ETGGSARQKVRGLVLRRGKRQSESLHAPGLHGR
ARASQKRVNDPECDWEGELIPYQETGS*KYRG*R
RNTQKPF*RK**SCIKLSRILTDFTIPVIN*YL
LFSQNRK*FPLDSRKICVK*GRKLVLDQCES*S
TFSAVRTTSTLGFIRL*AEELSVTRASRWPLSHG
VE*RVVLVCYNLCESAMPAKRAVF*SW*EYLSE
FTLYKTQQLQLLPFQQFCH*PDRNGFSLWMDVF
VVCNHYGLNHGLRICPNNRNFVREGIN*I*HTEP
VFEF*ILYL*IT*NSFLKPCIL*FLPFSEIAKC
QCIFGTAILTIY*IKILLK
Copyright ©2008,2017, all rights reserved. 