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Sequence NM_001040612
ACACGCCGATTTGCCCTTTTGATTCTTCCACAATCAGGGTGAGACTGCTCCCAGTGCCATGAACGGAGACGACGCCTTTGCAAGGAGACCCAGGGATGATGCTCAAATATCAGAGAAGTTACGAAAGGCCTTCGATGATATTGCCAAATACTTCTCTAAGAAAGAGTGGGAAAAGATGAAATCCTCGGAGAAAATCGTCT
ATGTGTATATGAAGCTAAACTATGAGGTCATGACTAAACTAGGTTTCAAGGTCACCCTCCCACCTTTCATGCGTAGTAAACGGGCTGCAGACTTCCACGG
GAATGATTTTGGTAACGATCGAAACCACAGGAATCAGGTTGAACGTCCTCAGATGACTTTCGGCAGCCTCCAGAGAATCTTCCCGAAGGACCCAAAAGGG
GGAAACATGCCTGGACCCACAGACTGCGTGAGAGAAAGCAGCTGGTGGTTTATGAAGAGATCAGCGACCCTGAGGAAGATGACGAGTAACTCCCCTCGGG
GATATGACACATGCCCATGATGAGAAGCAGAACGTGGTGACCTTTCACGAACATGGGCATGGCTGCGGACCCCTCGTCATCAGGTGCATAGCAAGTGAAA
GCAAGTGTTCACAACAGTGAAAAGTTGAGCGTCATTTTTCTTAGTGTGCCAAGAGTTCGATGTTGGCGTTTCCGCTGTATTTTCTTGCAGTGTGCCATTC
TGTTAGACATTAGCGTTTTCGTTGATGAGCAAGACATGCTTAATGCATATTTCGGCTTGTGTATCCATGCACCTACCTCAGAAAACAAGTATTGTCAGGT
ATTCTCTCCATAGAACAGCACTACCCTCCTCTCTCCCCAGATGTGACTACTGAGGGGAGGTCTGAGTGTTTAATTTCCGATTTTTTCCTCTGCATTTACA
CACACACCACACACGCACACACACACACCAAGTACCAGTATAAGCATCTCCCATCTGCTTTTCTCCATTGCCATGCGACCTGGTCAAGCCCCCCTCACTC
TGTTTCCTGTTCAGCATGTACTCCCCTCATCCGATTCCGTTGTATCAGTCACTGACAGTTAATAAACCTTTGCAAAC
- refseq_SSX4B.F1 (forward primer)
- refseq_SSX4B.R1 (reverse primer)
- Single exon skipping
Frame 0
TRRFALLILPQSG*DCSQCHERRRRLCKETQG*CSNIREVTKGLR*YCQILL*ERVGKDEILGENRL
CVYEAKL*GHD*TRFQGHPPTFHA**TGCRLPR
E*FW*RSKPQESG*TSSDDFRQPPENLPEGPKR
GKHAWTHRLRERKQLVVYEEISDPEEDDE*LPSG
I*HMPMMRSRTW*PFTNMGMAADPSSSGA*QVK
ASVHNSEKLSVIFLSVPRVRCWRFRCIFLQCAI
LLDISVFVDEQDMLNAYFGLCIHAPTSENKYCQV
FSP*NSTTLLSPQM*LLRGGLSV*FPIFSSAFT
HTPHTHTHTPSTSISISHLLFSIAMRPGQAPLT
LFPVQHVLPSSDSVVSVTDS**TFAN
Frame 1
HADLPF*FFHNQGETAPSAMNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIV
YVYMKLNYEVMTKLGFKVTLPPFMRSKRAADFHG
NDFGNDRNHRNQVERPQMTFGSLQRIFPKDPKG
GNMPGPTDCVRESSWWFMKRSATLRKMTSNSPR
GYDTCP**EAERGDLSRTWAWLRTPRHQVHSK*K
QVFTTVKS*ASFFLVCQEFDVGVSAVFSCSVPF
C*TLAFSLMSKTCLMHISACVSMHLPQKTSIVR
YSLHRTALPSSLPRCDY*GEV*VFNFRFFPLHLH
THHTRTHTHQVPV*ASPICFSPLPCDLVKPPSL
CFLFSMYSPHPIPLYQSLTVNKPLQ
Frame 2
TPICPFDSSTIRVRLLPVP*TETTPLQGDPGMMLKYQRSYERPSMILPNTSLRKSGKR*NPRRKSS
MCI*S*TMRS*LN*VSRSPSHLSCVVNGLQTST
GMILVTIETTGIRLNVLR*LSAASRESSRRTQKG
ETCLDPQTA*EKAAGGL*RDQRP*GR*RVTPLG
DMTHAHDEKQNVVTFHEHGHGCGPLVIRCIASE
SKCSQQ*KVERHFS*CAKSSMLAFPLYFLAVCHS
VRH*RFR**ARHA*CIFRLVYPCTYLRKQVLSG
ILSIEQHYPPLSPDVTTEGRSECLISDFFLCIY
THTTHAHTHTKYQYKHLPSAFLHCHATWSSPPHS
VSCSACTPLIRFRCISH*QLINLCK
Sequence NM_001034832
ACACGCCGATTTGCCCTTTTGATTCTTCCACAATCAGGGTGAGACTGCTCCCAGTGCCATGAACGGAGACGACGCCTTTGCAAGGAGACCCAGGGATGATGCTCAAATATCAGAGAAGTTACGAAAGGCCTTCGATGATATTGCCAAATACTTCTCTAAGAAAGAGTGGGAAAAGATGAAATCCTCGGAGAAAATCGTCT
ATGTGTATATGAAGCTAAACTATGAGGTCATGACTAAACTAGGTTTCAAGGTCACCCTCCCACCTTTCATGCGTAGTAAACGGGCTGCAGACTTCCACGG
GAATGATTTTGGTAACGATCGAAACCACAGGAATCAGGTTGAACGTCCTCAGATGACTTTCGGCAGCCTCCAGAGAATCTTCCCGAAGATCATGCCCAAG
AAGCCAGCAGAGGAAGAAAATGGTTTGAAGGAAGTGCCAGAGGCATCTGGCCCACAAAATGATGGGAAACAGCTGTGCCCCCCGGGAAATCCAAGTACCT
TGGAGAAGATTAACAAGACATCTGGACCCAAAAGGGGGAAACATGCCTGGACCCACAGACTGCGTGAGAGAAAGCAGCTGGTGGTTTATGAAGAGATCAG
CGACCCTGAGGAAGATGACGAGTAACTCCCCTCGGGGATATGACACATGCCCATGATGAGAAGCAGAACGTGGTGACCTTTCACGAACATGGGCATGGCT
GCGGACCCCTCGTCATCAGGTGCATAGCAAGTGAAAGCAAGTGTTCACAACAGTGAAAAGTTGAGCGTCATTTTTCTTAGTGTGCCAAGAGTTCGATGTT
GGCGTTTCCGCTGTATTTTCTTGCAGTGTGCCATTCTGTTAGACATTAGCGTTTTCGTTGATGAGCAAGACATGCTTAATGCATATTTCGGCTTGTGTAT
CCATGCACCTACCTCAGAAAACAAGTATTGTCAGGTATTCTCTCCATAGAACAGCACTACCCTCCTCTCTCCCCAGATGTGACTACTGAGGGGAGGTCTG
AGTGTTTAATTTCCGATTTTTTCCTCTGCATTTACACACACACCACACACGCACACACACACACCAAGTACCAGTATAAGCATCTCCCATCTGCTTTTCT
CCATTGCCATGCGACCTGGTCAAGCCCCCCTCACTCTGTTTCCTGTTCAGCATGTACTCCCCTCATCCGATTCCGTTGTATCAGTCACTGACAGTTAATA
AACCTTTGCAAAC
- refseq_SSX4B.F1 (forward primer)
- refseq_SSX4B.R1 (reverse primer)
- Single exon skipping
Frame 0
TRRFALLILPQSG*DCSQCHERRRRLCKETQG*CSNIREVTKGLR*YCQILL*ERVGKDEILGENRL
CVYEAKL*GHD*TRFQGHPPTFHA**TGCRLPR
E*FW*RSKPQESG*TSSDDFRQPPENLPEDHAQ
EASRGRKWFEGSARGIWPTK*WETAVPPGKSKYL
GED*QDIWTQKGETCLDPQTA*EKAAGGL*RDQ
RP*GR*RVTPLGDMTHAHDEKQNVVTFHEHGHG
CGPLVIRCIASESKCSQQ*KVERHFS*CAKSSML
AFPLYFLAVCHSVRH*RFR**ARHA*CIFRLVY
PCTYLRKQVLSGILSIEQHYPPLSPDVTTEGRS
ECLISDFFLCIYTHTTHAHTHTKYQYKHLPSAFL
HCHATWSSPPHSVSCSACTPLIRFRCISH*QLI
NLCK
Frame 1
HADLPF*FFHNQGETAPSAMNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIV
YVYMKLNYEVMTKLGFKVTLPPFMRSKRAADFHG
NDFGNDRNHRNQVERPQMTFGSLQRIFPKIMPK
KPAEEENGLKEVPEASGPQNDGKQLCPPGNPST
LEKINKTSGPKRGKHAWTHRLRERKQLVVYEEIS
DPEEDDE*LPSGI*HMPMMRSRTW*PFTNMGMA
ADPSSSGA*QVKASVHNSEKLSVIFLSVPRVRC
WRFRCIFLQCAILLDISVFVDEQDMLNAYFGLCI
HAPTSENKYCQVFSP*NSTTLLSPQM*LLRGGL
SV*FPIFSSAFTHTPHTHTHTPSTSISISHLLF
SIAMRPGQAPLTLFPVQHVLPSSDSVVSVTDS**
TFAN
Frame 2
TPICPFDSSTIRVRLLPVP*TETTPLQGDPGMMLKYQRSYERPSMILPNTSLRKSGKR*NPRRKSS
MCI*S*TMRS*LN*VSRSPSHLSCVVNGLQTST
GMILVTIETTGIRLNVLR*LSAASRESSRRSCPR
SQQRKKMV*RKCQRHLAHKMMGNSCAPREIQVP
WRRLTRHLDPKGGNMPGPTDCVRESSWWFMKRS
ATLRKMTSNSPRGYDTCP**EAERGDLSRTWAWL
RTPRHQVHSK*KQVFTTVKS*ASFFLVCQEFDV
GVSAVFSCSVPFC*TLAFSLMSKTCLMHISACV
SMHLPQKTSIVRYSLHRTALPSSLPRCDY*GEV*
VFNFRFFPLHLHTHHTRTHTHQVPV*ASPICFS
PLPCDLVKPPSLCFLFSMYSPHPIPLYQSLTVN
KPLQ
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