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Sequences

Sequence NM_180703

GGCGAATCTGCTGCTACCAATGTAAAGGTCAGGCCGAGGCCGGCGCGGAGAATCTGCTGTCGCCTGCAGCTGCTCGCCTGTCTCCGTCGGAAGGGAGCCC
AAGCTTTGCAGAGAGACAGGGAGTCGCCCAGGCTGGAGAGCGGTGGCGCGATCTCGGCTCACTGCAGCGTCGACATTTCGGGTCAAGCACGATCCTCCAG
CCTCGGCCTCTCAAAGTGCTGGTATTACAGGCGTGAGCCAGCGCGTGCCTGGCCAAAAATTTTCTAAATTTGTATAATAATTTATAATTGTAATGCATTT
TTATAGACACCATATGATCTAATCTTCACAAAAACCTAGTGAAGTGACATTTAGCTACATTTCACAATAAGAATCCTGAAGCTCAAAATTTACTGACCTC
AAATAATCCCAGCACTTTGGGAGGCTGAGGCAGGCGGGTCATCTGACATCAGGAAATCACTTGAACCTGGGAGGCAGAGGTTGCAGTGAGCCGAGATTGG
CCATTGCACTCCAGCCTGGGTGACAGAGTGAGACTTTGTCTCGAGTAAAAAAAGAGAATGTAAAAATCGAAAGAGATTGTTGTAGGAAATCTCAACCTAA
TGCTGCCGGGGAGGAAGTGCACCTAGAAAGATTAATGAGAAACAATGAAACCAGCTAACATGAACGATTGGATGCCCATCGCCAAGGAGTATGATCCACT
CAAAGCGGGCAGCATTGATGGCACCGATGAAGACCCACACGACCGCGCGGTCTGGAGGGCAATGCTGGCACGATATGTCCCCAACAAAGGTGTCATAGGA
GATCCCCTCCTCACCCTGTTTGTGGCCAGACTAAACTTGCAGACCAAGGAGGACAAATTAAAGGAAGTCTTTTCCCGCTATGGTGACATCCGGCGGCTTC
GGCTGGTCAGGGACTTGGTCACAGGTTTTTCAAAGGGCTACGCCTTCATCGAATACAAGGAGGAGCGTGCCGTGATCAAAGCTTACCGAGATGCTGATGG
CCTGGTTATTGACCAGCATGAGATATTTGTGGACTACGAGCTGGAAAGGACTCTCAAAGGGTGGATCCCTCGGCGACTTGGAGGCGGTCTTGGGGGAAAA
AAGGAGTCTGGGCAACTGAGATTTGGGGGACGGGACCGGCCTTTTCGAAAACCTATTAACTTGCCAGTTGTTAAAAACGACCTCTATAGAGAGGGAAAAC
GGGAAAGGCGGGAGCGATCTCGATCCCGAGAAAGACACTGGGACTCGAGGACAAGGGATCGAGACCATGACAGGGGCCGGGAGAAGAGATGGCAAGAAAG
AGAGCCGACCAGGGTGTGGCCCGACAATGACTGGGAGAGAGAGAGGGACTTCAGAGATGACAGGATCAAGGGGAGGGAGAAGAAGGAAAGAGGCAAGTAG
AGGCCCAACAGCAGAACCCCAAAGTGAAGTTACAGTGGAAATGAGTGGAGGGGGATTGTCTTTCAACGCAGCGTGAGTCTAATGGTTGAATAAAACTTAC
TGATGATCATGGG
  • refseq_U1SNRNPBP.F1 (forward primer)
  • refseq_U1SNRNPBP.R1 (reverse primer)
  • Intron retention

Frame 0

GESAATNVKVRPRPARRICCRLQLLACLRRKGA
QALQRDRESPRLESGGAISAHCSVDISGQARSSS
LGLSKCWYYRREPARAWPKIF*ICIIIYNCNAF
L*TPYDLIFTKT**SDI*LHFTIRILKLKIY*P
QIIPALWEAEAGGSSDIRKSLEPGRQRLQ*AEIG
HCTPAWVTE*DFVSSKKRECKNRKRLL*EIST*
CCRGGSAPRKINEKQ*NQLT*TIGCPSPRSMIH
SKRAALMAPMKTHTTARSGGQCWHDMSPTKVS*E
IPSSPCLWPD*TCRPRRTN*RKSFPAMVTSGGF
GWSGTWSQVFQRATPSSNTRRSVP*SKLTEMLM
AWLLTSMRYLWTTSWKGLSKGGSLGDLEAVLGEK
RSLGN*DLGDGTGLFENLLTCQLLKTTSIEREN
GKGGSDLDPEKDTGTRGQGIETMTGAGRRDGKK
ESRPGCGPTMTGRERGTSEMTGSRGGRRRKEASR
GPTAEPQSEVTVEMSGGGLSFNAA*V*WLNKTY
**SW

Frame 1

ANLLLPM*RSGRGRRGESAVACSCSPVSVGREP
KLCRETGSRPGWRAVARSRLTAASTFRVKHDPP
ASASQSAGITGVSQRVPGQKFSKFV**FIIVMHF
YRHHMI*SSQKPSEVTFSYISQ*ES*SSKFTDL
K*SQHFGRLRQAGHLTSGNHLNLGGRGCSEPRL
AIALQPG*QSETLSRVKKENVKIERDCCRKSQPN
AAGEEVHLERLMRNNETS*HERLDAHRQGV*ST
QSGQH*WHR*RPTRPRGLEGNAGTICPQQRCHR
RSPPHPVCGQTKLADQGGQIKGSLFPLW*HPAAS
AGQGLGHRFFKGLRLHRIQGGACRDQSLPRC*W
PGY*PA*DICGLRAGKDSQRVDPSATWRRSWGK
KGVWATEIWGTGPAFSKTY*LASC*KRPL*RGKT
GKAGAISIPRKTLGLEDKGSRP*QGPGEEMARK
RADQGVARQ*LGEREGLQR*QDQGEGEEGKRQV
EAQQQNPKVKLQWK*VEGDCLSTQRESNG*IKLT
DDHG

Frame 2

RICCYQCKGQAEAGAENLLSPAAARLSPSEGSP
SFAERQGVAQAGERWRDLGSLQRRHFGSSTILQ
PRPLKVLVLQA*ASACLAKNFLNLYNNL*L*CI
FIDTI*SNLHKNLVK*HLATFHNKNPEAQNLLTS
NNPSTLGG*GRRVI*HQEIT*TWEAEVAVSRDW
PLHSSLGDRVRLCLE*KKRM*KSKEIVVGNLNL
MLPGRKCT*KD**ETMKPANMNDWMPIAKEYDPL
KAGSIDGTDEDPHDRAVWRAMLARYVPNKGVIG
DPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRL
RLVRDLVTGFSKGYAFIEYKEERAVIKAYRDADG
LVIDQHEIFVDYELERTLKGWIPRRLGGGLGGK
KESGQLRFGGRDRPFRKPINLPVVKNDLYREGK
RERRERSRSRERHWDSRTRDRDHDRGREKRWQER
EPTRVWPDNDWERERDFRDDRIKGREKKERGK*
RPNSRTPK*SYSGNEWRGIVFQRSVSLMVE*NL
LMIM

Sequence NM_180699

GGCGAATCTGCTGCTACCAATGTAAAGGTCAGGCCGAGGCCGGCGCGGAGAATCTGCTGTCGCCTGCAGCTGCTCGCCTGTCTCCGTCGGAAGGGAGCCC
AAGCTTTGCAGAGAGACAGGGAGTCGCCCAGGCTGGAGAGCGGTGGCGCGATCTCGGCTCACTGCAGCGTCGACATTTCGGGTCAAGCACGATCCTCCAG
CCTCGGCCTCTCAAAGTGCTGGTATTACAGGCGTGAGCCAGCGCGTGCCTGGCCAAAAATTTTCTAAATTTGTATAATAATTTATAATTGTAATGCATTT
TTATAGACACCATATGATCTAATCTTCACAAAAACCTAGTGAAGTGACATTTAGCTACATTTCACAATAAGAATCCTGAAGCTCAAAATTTACTGACCTC
AAATAATCCCAGCACTTTGGGAGGCTGAGGCAGGCGGGTCATCTGACATCAGGAGTTTGAGACCAGCTTGGCCAACATGGTGAAATCCTGTCTGTACTAA
AAATGCAAAAATTAGCTGGGCGTGGTGGTGTGTGTCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCAGAGGTTG
CAGTGAGCCGAGATTGGCCATTGCACTCCAGCCTGGGTGACAGAGTGAGACTTTGTCTCGAGTAAAAAAAGAGAATGTAAAAATCGAAAGAGATTGTTGT
AGGAAATCTCAACCTAATGCTGCCGGGGAGGAAGTGCACCTAGAAAGATTAATGAGAAACAATGAAACCAGCTAACATGAACGATTGGATGCCCATCGCC
AAGGAGTATGATCCACTCAAAGCGGGCAGCATTGATGGCACCGATGAAGACCCACACGACCGCGCGGTCTGGAGGGCAATGCTGGCACGATATGTCCCCA
ACAAAGGTGTCATAGGAGATCCCCTCCTCACCCTGTTTGTGGCCAGACTAAACTTGCAGACCAAGGAGGACAAATTAAAGGAAGTCTTTTCCCGCTATGG
TGACATCCGGCGGCTTCGGCTGGTCAGGGACTTGGTCACAGGTTTTTCAAAGGGCTACGCCTTCATCGAATACAAGGAGGAGCGTGCCGTGATCAAAGCT
TACCGAGATGCTGATGGCCTGGTTATTGACCAGCATGAGATATTTGTGGACTACGAGCTGGAAAGGACTCTCAAAGGGTGGATCCCTCGGCGACTTGGAG
GCGGTCTTGGGGGAAAAAAGGAGTCTGGGCAACTGAGATTTGGGGGACGGGACCGGCCTTTTCGAAAACCTATTAACTTGCCAGTTGTTAAAAACGACCT
CTATAGAGAGGGAAAACGGGAAAGGCGGGAGCGATCTCGATCCCGAGAAAGACACTGGGACTCGAGGACAAGGGATCGAGACCATGACAGGGGCCGGGAG
AAGAGATGGCAAGAAAGAGAGCCGACCAGGGTGTGGCCCGACAATGACTGGGAGAGAGAGAGGGACTTCAGAGATGACAGGATCAAGGGGAGGGAGAAGA
AGGAAAGAGGCAAGTAGAGGCCCAACAGCAGAACCCCAAAGTGAAGTTACAGTGGAAATGAGTGGAGGGGGATTGTCTTTCAACGCAGCGTGAGTCTAAT
GGTTGAATAAAACTTACTGATGATCATGGG
  • refseq_U1SNRNPBP.F1 (forward primer)
  • refseq_U1SNRNPBP.R1 (reverse primer)
  • Intron retention

Frame 0

GESAATNVKVRPRPARRICCRLQLLACLRRKGA
QALQRDRESPRLESGGAISAHCSVDISGQARSSS
LGLSKCWYYRREPARAWPKIF*ICIIIYNCNAF
L*TPYDLIFTKT**SDI*LHFTIRILKLKIY*P
QIIPALWEAEAGGSSDIRSLRPAWPTW*NPVCTK
NAKISWAWWCVSVIPATREAEAGESLEPGRQRL
Q*AEIGHCTPAWVTE*DFVSSKKRECKNRKRLL
*EIST*CCRGGSAPRKINEKQ*NQLT*TIGCPSP
RSMIHSKRAALMAPMKTHTTARSGGQCWHDMSP
TKVS*EIPSSPCLWPD*TCRPRRTN*RKSFPAM
VTSGGFGWSGTWSQVFQRATPSSNTRRSVP*SKL
TEMLMAWLLTSMRYLWTTSWKGLSKGGSLGDLE
AVLGEKRSLGN*DLGDGTGLFENLLTCQLLKTT
SIERENGKGGSDLDPEKDTGTRGQGIETMTGAGR
RDGKKESRPGCGPTMTGRERGTSEMTGSRGGRR
RKEASRGPTAEPQSEVTVEMSGGGLSFNAA*V*
WLNKTY**SW

Frame 1

ANLLLPM*RSGRGRRGESAVACSCSPVSVGREP
KLCRETGSRPGWRAVARSRLTAASTFRVKHDPP
ASASQSAGITGVSQRVPGQKFSKFV**FIIVMHF
YRHHMI*SSQKPSEVTFSYISQ*ES*SSKFTDL
K*SQHFGRLRQAGHLTSGV*DQLGQHGEILSVL
KMQKLAGRGGVCL*SQLLGRLRQENHLNLGGRGC
SEPRLAIALQPG*QSETLSRVKKENVKIERDCC
RKSQPNAAGEEVHLERLMRNNETS*HERLDAHR
QGV*STQSGQH*WHR*RPTRPRGLEGNAGTICPQ
QRCHRRSPPHPVCGQTKLADQGGQIKGSLFPLW
*HPAASAGQGLGHRFFKGLRLHRIQGGACRDQS
LPRC*WPGY*PA*DICGLRAGKDSQRVDPSATWR
RSWGKKGVWATEIWGTGPAFSKTY*LASC*KRP
L*RGKTGKAGAISIPRKTLGLEDKGSRP*QGPG
EEMARKRADQGVARQ*LGEREGLQR*QDQGEGEE
GKRQVEAQQQNPKVKLQWK*VEGDCLSTQRESN
G*IKLTDDHG

Frame 2

RICCYQCKGQAEAGAENLLSPAAARLSPSEGSP
SFAERQGVAQAGERWRDLGSLQRRHFGSSTILQ
PRPLKVLVLQA*ASACLAKNFLNLYNNL*L*CI
FIDTI*SNLHKNLVK*HLATFHNKNPEAQNLLTS
NNPSTLGG*GRRVI*HQEFETSLANMVKSCLY*
KCKN*LGVVVCVCNPSYSGG*GRRIT*TWEAEV
AVSRDWPLHSSLGDRVRLCLE*KKRM*KSKEIVV
GNLNLMLPGRKCT*KD**ETMKPANMNDWMPIA
KEYDPLKAGSIDGTDEDPHDRAVWRAMLARYVP
NKGVIGDPLLTLFVARLNLQTKEDKLKEVFSRYG
DIRRLRLVRDLVTGFSKGYAFIEYKEERAVIKA
YRDADGLVIDQHEIFVDYELERTLKGWIPRRLG
GGLGGKKESGQLRFGGRDRPFRKPINLPVVKNDL
YREGKRERRERSRSRERHWDSRTRDRDHDRGRE
KRWQEREPTRVWPDNDWERERDFRDDRIKGREK
KERGK*RPNSRTPK*SYSGNEWRGIVFQRSVSLM
VE*NLLMIM

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