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Sequences

Sequence NM_007020

GGCGAATCTGCTGCTACCAATGTAAAGGTCAGGCCGAGGCCGGCGCGGAGAATCTGCTGTCGCCTGCAGCTGCTCGCCTGTCTCCGTCGGAAGGGAGCCC
AAGCTTTGCAGAGAGACAGGGAGTCGCCCAGGCTGGAGAGCGGTGGCGCGATCTCGGCTCACTGCAGCGTCGACATTTCGGGTCAAGCACGATCCTCCAG
CCTCGGCCTCTCAAAGTGCTGGTATTACAGGCGTGAGCCAGCGCGTGCCTGGCCAAAAATTTTCTAAATTTGTATAATAATTTATAATTGTAATGCATTT
TTATAGACACCATATGATCTAATCTTCACAAAAACCTAGTGAAGTGACATTTAGCTACATTTCACAATAAGAATCCTGAAGCTCAAAATTTACTGACCTC
AAATAATCCCAGCACTTTGGGAGGCTGAGGCAGGCGGGTCATCTGACATCAGGAGTTTGAGACCAGCTTGGCCAACATGGTGAAATCCTGTCTGTACTAA
AAATGCAAAAATTAGCTGGGCGTGGTGGTGTGTGTCTGTAATCCCAGCTACTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGTCTGGC
CTCAGCCAAGGTTTTTAAGTAACATATTTCAGCATTGGCTCTACAGCGTTGCAGAACATGAACGATTGGATGCCCATCGCCAAGGAGTATGATCCACTCA
AAGCGGGCAGCATTGATGGCACCGATGAAGACCCACACGACCGCGCGGTCTGGAGGGCAATGCTGGCACGATATGTCCCCAACAAAGGTGTCATAGGAGA
TCCCCTCCTCACCCTGTTTGTGGCCAGACTAAACTTGCAGACCAAGGAGGACAAATTAAAGGAAGTCTTTTCCCGCTATGGTGACATCCGGCGGCTTCGG
CTGGTCAGGGACTTGGTCACAGGTTTTTCAAAGGGCTACGCCTTCATCGAATACAAGGAGGAGCGTGCCGTGATCAAAGCTTACCGAGATGCTGATGGCC
TGGTTATTGACCAGCATGAGATATTTGTGGACTACGAGCTGGAAAGGACTCTCAAAGGGTGGATCCCTCGGCGACTTGGAGGCGGTCTTGGGGGAAAAAA
GGAGTCTGGGCAACTGAGATTTGGGGGACGGGACCGGCCTTTTCGAAAACCTATTAACTTGCCAGTTGTTAAAAACGACCTCTATAGAGAGGGAAAACGG
GAAAGGCGGGAGCGATCTCGATCCCGAGAAAGACACTGGGACTCGAGGACAAGGGATCGAGACCATGACAGGGGCCGGGAGAAGAGATGGCAAGAAAGAG
AGCCGACCAGGGTGTGGCCCGACAATGACTGGGAGAGAGAGAGGGACTTCAGAGATGACAGGATCAAGGGGAGGGAGAAGAAGGAAAGAGGCAAGTAGAG
GCCCAACAGCAGAACCCCAAAGTGAAGTTACAGTGGAAATGAGTGGAGGGGGATTGTCTTTCAACGCAGCGTGAGTCTAATGGTTGAATAAAACTTACTG
ATGATCATGGG
  • refseq_U1SNRNPBP.F1 (forward primer)
  • refseq_U1SNRNPBP.R1 (reverse primer)
  • Exon skipping and alternative donor or acceptor

Frame 0

GESAATNVKVRPRPARRICCRLQLLACLRRKGA
QALQRDRESPRLESGGAISAHCSVDISGQARSSS
LGLSKCWYYRREPARAWPKIF*ICIIIYNCNAF
L*TPYDLIFTKT**SDI*LHFTIRILKLKIY*P
QIIPALWEAEAGGSSDIRSLRPAWPTW*NPVCTK
NAKISWAWWCVSVIPATRPPKVLGLQA*ATASG
LSQGF*VTYFSIGSTALQNMNDWMPIAKEYDPL
KAGSIDGTDEDPHDRAVWRAMLARYVPNKGVIGD
PLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLR
LVRDLVTGFSKGYAFIEYKEERAVIKAYRDADG
LVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKK
ESGQLRFGGRDRPFRKPINLPVVKNDLYREGKR
ERRERSRSRERHWDSRTRDRDHDRGREKRWQER
EPTRVWPDNDWERERDFRDDRIKGREKKERGK*R
PNSRTPK*SYSGNEWRGIVFQRSVSLMVE*NLL
MIM

Frame 1

ANLLLPM*RSGRGRRGESAVACSCSPVSVGREP
KLCRETGSRPGWRAVARSRLTAASTFRVKHDPP
ASASQSAGITGVSQRVPGQKFSKFV**FIIVMHF
YRHHMI*SSQKPSEVTFSYISQ*ES*SSKFTDL
K*SQHFGRLRQAGHLTSGV*DQLGQHGEILSVL
KMQKLAGRGGVCL*SQLLGLPKCWDYRREPPRLA
SAKVFK*HISALALQRCRT*TIGCPSPRSMIHS
KRAALMAPMKTHTTARSGGQCWHDMSPTKVS*E
IPSSPCLWPD*TCRPRRTN*RKSFPAMVTSGGFG
WSGTWSQVFQRATPSSNTRRSVP*SKLTEMLMA
WLLTSMRYLWTTSWKGLSKGGSLGDLEAVLGEK
RSLGN*DLGDGTGLFENLLTCQLLKTTSIERENG
KGGSDLDPEKDTGTRGQGIETMTGAGRRDGKKE
SRPGCGPTMTGRERGTSEMTGSRGGRRRKEASR
GPTAEPQSEVTVEMSGGGLSFNAA*V*WLNKTY*
*SW

Frame 2

RICCYQCKGQAEAGAENLLSPAAARLSPSEGSP
SFAERQGVAQAGERWRDLGSLQRRHFGSSTILQ
PRPLKVLVLQA*ASACLAKNFLNLYNNL*L*CI
FIDTI*SNLHKNLVK*HLATFHNKNPEAQNLLTS
NNPSTLGG*GRRVI*HQEFETSLANMVKSCLY*
KCKN*LGVVVCVCNPSYSASQSAGITGVSHRVW
PQPRFLSNIFQHWLYSVAEHERLDAHRQGV*STQ
SGQH*WHR*RPTRPRGLEGNAGTICPQQRCHRR
SPPHPVCGQTKLADQGGQIKGSLFPLW*HPAAS
AGQGLGHRFFKGLRLHRIQGGACRDQSLPRC*WP
GY*PA*DICGLRAGKDSQRVDPSATWRRSWGKK
GVWATEIWGTGPAFSKTY*LASC*KRPL*RGKT
GKAGAISIPRKTLGLEDKGSRP*QGPGEEMARKR
ADQGVARQ*LGEREGLQR*QDQGEGEEGKRQVE
AQQQNPKVKLQWK*VEGDCLSTQRESNG*IKLT
DDHG

Sequence NM_180699

GGCGAATCTGCTGCTACCAATGTAAAGGTCAGGCCGAGGCCGGCGCGGAGAATCTGCTGTCGCCTGCAGCTGCTCGCCTGTCTCCGTCGGAAGGGAGCCC
AAGCTTTGCAGAGAGACAGGGAGTCGCCCAGGCTGGAGAGCGGTGGCGCGATCTCGGCTCACTGCAGCGTCGACATTTCGGGTCAAGCACGATCCTCCAG
CCTCGGCCTCTCAAAGTGCTGGTATTACAGGCGTGAGCCAGCGCGTGCCTGGCCAAAAATTTTCTAAATTTGTATAATAATTTATAATTGTAATGCATTT
TTATAGACACCATATGATCTAATCTTCACAAAAACCTAGTGAAGTGACATTTAGCTACATTTCACAATAAGAATCCTGAAGCTCAAAATTTACTGACCTC
AAATAATCCCAGCACTTTGGGAGGCTGAGGCAGGCGGGTCATCTGACATCAGGAGTTTGAGACCAGCTTGGCCAACATGGTGAAATCCTGTCTGTACTAA
AAATGCAAAAATTAGCTGGGCGTGGTGGTGTGTGTCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCAGAGGTTG
CAGTGAGCCGAGATTGGCCATTGCACTCCAGCCTGGGTGACAGAGTGAGACTTTGTCTCGAGTAAAAAAAGAGAATGTAAAAATCGAAAGAGATTGTTGT
AGGAAATCTCAACCTAATGCTGCCGGGGAGGAAGTGCACCTAGAAAGATTAATGAGAAACAATGAAACCAGCTAACATGAACGATTGGATGCCCATCGCC
AAGGAGTATGATCCACTCAAAGCGGGCAGCATTGATGGCACCGATGAAGACCCACACGACCGCGCGGTCTGGAGGGCAATGCTGGCACGATATGTCCCCA
ACAAAGGTGTCATAGGAGATCCCCTCCTCACCCTGTTTGTGGCCAGACTAAACTTGCAGACCAAGGAGGACAAATTAAAGGAAGTCTTTTCCCGCTATGG
TGACATCCGGCGGCTTCGGCTGGTCAGGGACTTGGTCACAGGTTTTTCAAAGGGCTACGCCTTCATCGAATACAAGGAGGAGCGTGCCGTGATCAAAGCT
TACCGAGATGCTGATGGCCTGGTTATTGACCAGCATGAGATATTTGTGGACTACGAGCTGGAAAGGACTCTCAAAGGGTGGATCCCTCGGCGACTTGGAG
GCGGTCTTGGGGGAAAAAAGGAGTCTGGGCAACTGAGATTTGGGGGACGGGACCGGCCTTTTCGAAAACCTATTAACTTGCCAGTTGTTAAAAACGACCT
CTATAGAGAGGGAAAACGGGAAAGGCGGGAGCGATCTCGATCCCGAGAAAGACACTGGGACTCGAGGACAAGGGATCGAGACCATGACAGGGGCCGGGAG
AAGAGATGGCAAGAAAGAGAGCCGACCAGGGTGTGGCCCGACAATGACTGGGAGAGAGAGAGGGACTTCAGAGATGACAGGATCAAGGGGAGGGAGAAGA
AGGAAAGAGGCAAGTAGAGGCCCAACAGCAGAACCCCAAAGTGAAGTTACAGTGGAAATGAGTGGAGGGGGATTGTCTTTCAACGCAGCGTGAGTCTAAT
GGTTGAATAAAACTTACTGATGATCATGGG
  • refseq_U1SNRNPBP.F1 (forward primer)
  • refseq_U1SNRNPBP.R1 (reverse primer)
  • Exon skipping and alternative donor or acceptor

Frame 0

GESAATNVKVRPRPARRICCRLQLLACLRRKGA
QALQRDRESPRLESGGAISAHCSVDISGQARSSS
LGLSKCWYYRREPARAWPKIF*ICIIIYNCNAF
L*TPYDLIFTKT**SDI*LHFTIRILKLKIY*P
QIIPALWEAEAGGSSDIRSLRPAWPTW*NPVCTK
NAKISWAWWCVSVIPATREAEAGESLEPGRQRL
Q*AEIGHCTPAWVTE*DFVSSKKRECKNRKRLL
*EIST*CCRGGSAPRKINEKQ*NQLT*TIGCPSP
RSMIHSKRAALMAPMKTHTTARSGGQCWHDMSP
TKVS*EIPSSPCLWPD*TCRPRRTN*RKSFPAM
VTSGGFGWSGTWSQVFQRATPSSNTRRSVP*SKL
TEMLMAWLLTSMRYLWTTSWKGLSKGGSLGDLE
AVLGEKRSLGN*DLGDGTGLFENLLTCQLLKTT
SIERENGKGGSDLDPEKDTGTRGQGIETMTGAGR
RDGKKESRPGCGPTMTGRERGTSEMTGSRGGRR
RKEASRGPTAEPQSEVTVEMSGGGLSFNAA*V*
WLNKTY**SW

Frame 1

ANLLLPM*RSGRGRRGESAVACSCSPVSVGREP
KLCRETGSRPGWRAVARSRLTAASTFRVKHDPP
ASASQSAGITGVSQRVPGQKFSKFV**FIIVMHF
YRHHMI*SSQKPSEVTFSYISQ*ES*SSKFTDL
K*SQHFGRLRQAGHLTSGV*DQLGQHGEILSVL
KMQKLAGRGGVCL*SQLLGRLRQENHLNLGGRGC
SEPRLAIALQPG*QSETLSRVKKENVKIERDCC
RKSQPNAAGEEVHLERLMRNNETS*HERLDAHR
QGV*STQSGQH*WHR*RPTRPRGLEGNAGTICPQ
QRCHRRSPPHPVCGQTKLADQGGQIKGSLFPLW
*HPAASAGQGLGHRFFKGLRLHRIQGGACRDQS
LPRC*WPGY*PA*DICGLRAGKDSQRVDPSATWR
RSWGKKGVWATEIWGTGPAFSKTY*LASC*KRP
L*RGKTGKAGAISIPRKTLGLEDKGSRP*QGPG
EEMARKRADQGVARQ*LGEREGLQR*QDQGEGEE
GKRQVEAQQQNPKVKLQWK*VEGDCLSTQRESN
G*IKLTDDHG

Frame 2

RICCYQCKGQAEAGAENLLSPAAARLSPSEGSP
SFAERQGVAQAGERWRDLGSLQRRHFGSSTILQ
PRPLKVLVLQA*ASACLAKNFLNLYNNL*L*CI
FIDTI*SNLHKNLVK*HLATFHNKNPEAQNLLTS
NNPSTLGG*GRRVI*HQEFETSLANMVKSCLY*
KCKN*LGVVVCVCNPSYSGG*GRRIT*TWEAEV
AVSRDWPLHSSLGDRVRLCLE*KKRM*KSKEIVV
GNLNLMLPGRKCT*KD**ETMKPANMNDWMPIA
KEYDPLKAGSIDGTDEDPHDRAVWRAMLARYVP
NKGVIGDPLLTLFVARLNLQTKEDKLKEVFSRYG
DIRRLRLVRDLVTGFSKGYAFIEYKEERAVIKA
YRDADGLVIDQHEIFVDYELERTLKGWIPRRLG
GGLGGKKESGQLRFGGRDRPFRKPINLPVVKNDL
YREGKRERRERSRSRERHWDSRTRDRDHDRGRE
KRWQEREPTRVWPDNDWERERDFRDDRIKGREK
KERGK*RPNSRTPK*SYSGNEWRGIVFQRSVSLM
VE*NLLMIM

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