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Sequences

Sequence NM_152226

TGAAGATTACAAATGAGACTGGGAAACCCTCTTCAATAAGACCTGTGTGATGATAGATTGTGTCCTGAGCCCGCAGGTCAGGCTGAAAGAGTCAACAACC AGCAAAGTGAAGATCTAGGAGTCTGTTCCCCTTGAACCTGTGTGGACCTGATCAAACCTCGAGGGAAAGGCTGGGAGAACACATCCCTGGTCAGCTGTAG GAAAGCCAGAGAGCATTTGAGAAGAGGCTGAAGCTTGAATTTTGCAAACACACAAGCCCTCTGCATTTCCCCAGAGAGAAGGTTTTTTTCTCGTCTTCAT TTCCTTTGAAACACCTGGGGTGAGGAAAAACCTCTACATTGGCCAAGCAGAAGAAACAGAATCTATGACTGAAGAGGATCGGCTAAGAGTGGTTCCTCGC AGCTTAAAGGGAGGCACTTTTCACACTCTGTCTTAAAATCAGAAGTTGAATTCATGAACACATATGATTTAGATAGAAGTCATGGGATGCAGCAGTTCTT CAACGAAAACCAGGAGATCTGACACATCACTGAGAGCTGCGTTGATCATCCAGAACTGGTACCGAGGTTACAAAGCTCGACTGAAGGCCAGACAACACTA TGCCCTCACCATCTTCCAGTCCATCGAATATGCTGATGAACAAGGCCAAATGCAGTTATCCACCTTCTTTTCCTTCATGTTGGAAAACTACACACATATA CATAAGGAAGAGCTAGAATTAAGAAATCAGTCTCTTGAAAGCGAACAGGACATGAGGGATAGATGGGATTATGTGGACTCGATAGATGTCCCAGACTCCT ATAATGGTCCTCGGCTACAATTTCCTCTCACTTGTACGGATATTGATTTACTTCTTGAGGCCTTCAAGGAACAACAGATACTTCATGCCCATTATGTCTT AGAGGTGCTATTTGAAACCAAGAAAGTCCTGAAGCAAATGCCGAATTTCACTCACATACAAACTTCTCCCTCCAAAGAGGTAACAATCTGTGGTGATTTG CATGGGAAACTGGATGATCTTTTTTTGATCTTCTACAAGAATGGTCTCCCCTCAGAGAGGAACCCGTATGTTTTTAATGGTGACTTTGTAGATCGAGGAA AGAATTCCATAGAGATCCTAATGATCCTGTGTGTGAGTTTTCTTGTCTACCCCAATGACCTGCACTTGAACAGAGGGAACCACGAAGATTTTATGATGAA TCTGAGGTATGGCTTCACGAAAGAAATTTTGCATAAATATAAGCTACATGGAAAAAGAATCTTACAAATCTTGGAAGAATTCTATGCCTGGCTCCCAATC GGTACAATCGTTGACAATGAAATCCTGGTCATCCATGGTGGGATATCAGAGACCACAGACTTGAATTTACTCCACCGTGTAGAGAGGAACAAGATGAAAT CTGTGCTGATACCACCAACGGAAACAAACAGAGACCATGACACTGACTCGAAGCACAATAAAGTAGGTGTGACTTTTAATGCACATGGAAGAATCAAAAC AAATGGATCTCCTACTGAACACTTAACAGAGCATGAATGGGAACAGGTGGTGACTATATTTTCTGCTTCTAATTATTATGAAGAAGGCAGCAATCGAGGA GCTTACATCAAACTATGTTCTGGTACAACTCCTCGATTTTTCCAGTACCAAGTAACTAAAGCAACGTGCTTTCAGCCTCTTCGCCAAAGAGTGGATACTA TGGAAAACAGCGCCATCAAGATATTAAGAGAGAGAGTGATTTCACGAAAAAGTGACCTTACTCGTGCTTTCCAACTTCAAGACCACAGAAAATCAGGAAA ACTTTCTGTGAGCCAGTGGGCTTTTTGCATGGAGAACATTTTGGGGCTGAACTTACCATGGAGATCCCTCAGTTCGAATCTGGTAAACATAGACCAAAAT GGAAACGTTGAATACATGTCCAGCTTCCAGAATATCCGCATTGAAAAACCTGTACAAGAGGCTCATTCTACTCTAGTTGAAACTCTGTACAGATACAGAT CTGACCTGGAAATCATATTTAATGCCATTGACACTGATCACTCAGGCCTGATCTCCGTGGAAGAATTTCGTGCCATGTGGAAACTTTTTAGTTCTCACTA CAATGTTCACATTGATGATTCCCAAGTCAATAAGCTTGCCAACATAATGGACTTGAACAAAGATGGAAGCATTGACTTTAATGAGTTTTTAAAGGCTTTC TATGTAGTGCATAGATATGAAGACTTGATGAAACCTGATGTCACCAACCTTGGCTAAACACAAATGAGAGCTTCCCTCAGGCTCCCTGAAACAGCTAGGC CCAAATCACAAGTACAGTCCTTTCCAACACCCCTGAAATTCATAGTCAGTAGCAGAGAAAAGCAGATCCCAATTCATCCCACAAACAGATGCATAGTATG GGTTTTGGAAGTCCCTAGCAAGCTGTTATTGGTAAGATTAGGTTAAATGTCAGTAATAGGATTTGGTTTCAGCATTAGTACCTACATATTGCCAGTGAGA AACTGGGTTGGACCTAGTGGTGTTGTCGTGAGTGCCACCTAACCAGGAGGCCAGAGCGGTTTGAAAACATCCTGAAAGGAACTCATACAGCACAAGAGAA AACTACTAAGCTTGACATCTGTGAGTGACTGAGGGAGACAGGAGGAATACCAGGTTATTCATGGAATAAAGTCTTTCCATCTTTAAA

refseq_PPEF1.F1 (forward primer)
refseq_PPEF1.R1 (reverse primer)
Exon skipping and alternative donor or acceptor

Frame 0

*RLQMRLGNPLQ*DLCDDRLCPEPAGQAERVNN QQSEDLGVCSP*TCVDLIKPRGKGWENTSLVSCR KAREHLRRG*SLNFANTQALCISPERRFFSRLH FL*NTWGEEKPLHWPSRRNRIYD*RGSAKSGSS QLKGRHFSHSVLKSEVEFMNTYDLDRSHGMQQFF NENQEI*HITESCVDHPELVPRLQSSTEGQTTL CPHHLPVHRIC**TRPNAVIHLLFLHVGKLHTY T*GRARIKKSVS*KRTGHEG*MGLCGLDRCPRLL *WSSATISSHLYGY*FTS*GLQGTTDTSCPLCL RGAI*NQESPEANAEFHSHTNFSLQRGNNLW*F AWETG*SFFDLLQEWSPLREEPVCF*W*LCRSRK EFHRDPNDPVCEFSCLPQ*PALEQREPRRFYDE SEVWLHERNFA*I*ATWKKNLTNLGRILCLAPN RYNR*Q*NPGHPWWDIRDHRLEFTPPCREEQDEI CADTTNGNKQRP*H*LEAQ*SRCDF*CTWKNQN KWISY*TLNRA*MGTGGDYIFCF*LL*RRQQSR SLHQTMFWYNSSIFPVPSN*SNVLSASSPKSGYY GKQRHQDIKRESDFTKK*PYSCFPTSRPQKIRK TFCEPVGFLHGEHFGAELTMEIPQFESGKHRPK WKR*IHVQLPEYPH*KTCTRGSFYSS*NSVQIQI *PGNHI*CH*H*SLRPDLRGRISCHVETF*FSL QCSH**FPSQ*ACQHNGLEQRWKH*L**VFKGF LCSA*I*RLDET*CHQPWLNTNESFPQAP*NS*A QITSTVLSNTPEIHSQ*QRKADPNSSHKQMHSM GFGSP*QAVIGKIRLNVSNRIWFQH*YLHIASE KLGWT*WCCRECHLTRRPERFENILKGTHTAQEK TTKLDICE*LRETGGIPGYSWNKVFPSL

Frame 1

EDYK*DWETLFNKTCVMIDCVLSPQVRLKESTT SKVKI*ESVPLEPVWT*SNLEGKAGRTHPWSAV GKPESI*EEAEA*ILQTHKPSAFPQREGFFLVFI SFETPGVRKNLYIGQAEETESMTEEDRLRVVPR SLKGGTFHTLS*NQKLNS*THMI*IEVMGCSSS STKTRRSDTSLRAALIIQNWYRGYKARLKARQHY ALTIFQSIEYADEQGQMQLSTFFSFMLENYTHI HKEELELRNQSLESEQDMRDRWDYVDSIDVPDS YNGPRLQFPLTCTDIDLLLEAFKEQQILHAHYVL EVLFETKKVLKQMPNFTHIQTSPSKEVTICGDL HGKLDDLFLIFYKNGLPSERNPYVFNGDFVDRG KNSIEILMILCVSFLVYPNDLHLNRGNHEDFMMN LRYGFTKEILHKYKLHGKRILQILEEFYAWLPI GTIVDNEILVIHGGISETTDLNLLHRVERNKMK SVLIPPTETNRDHDTDSKHNKVGVTFNAHGRIKT NGSPTEHLTEHEWEQVVTIFSASNYYEEGSNRG AYIKLCSGTTPRFFQYQVTKATCFQPLRQRVDT MENSAIKILRERVISRKSDLTRAFQLQDHRKSGK LSVSQWAFCMENILGLNLPWRSLSSNLVNIDQN GNVEYMSSFQNIRIEKPVQEAHSTLVETLYRYR SDLEIIFNAIDTDHSGLISVEEFRAMWKLFSSHY NVHIDDSQVNKLANIMDLNKDGSIDFNEFLKAF YVVHRYEDLMKPDVTNLG*TQMRASLRLPETAR PKSQVQSFPTPLKFIVSSREKQIPIHPTNRCIVW VLEVPSKLLLVRLG*MSVIGFGFSISTYILPVR NWVGPSGVVVSAT*PGGQSGLKTS*KELIQHKR KLLSLTSVSD*GRQEEYQVIHGIKSFHL*

Frame 2

KITNETGKPSSIRPV***IVS*ARRSG*KSQQP AK*RSRSLFPLNLCGPDQTSRERLGEHIPGQL* ESQRAFEKRLKLEFCKHTSPLHFPREKVFFSSS FPLKHLG*GKTSTLAKQKKQNL*LKRIG*EWFLA A*REALFTLCLKIRS*IHEHI*FR*KSWDAAVL QRKPGDLTHH*ELR*SSRTGTEVTKLD*RPDNT MPSPSSSPSNMLMNKAKCSYPPSFPSCWKTTHIY IRKS*N*EISLLKANRT*GIDGIMWTR*MSQTP IMVLGYNFLSLVRILIYFLRPSRNNRYFMPIMS *RCYLKPRKS*SKCRISLTYKLLPPKR*QSVVIC MGNWMIFF*SSTRMVSPQRGTRMFLMVTL*IEE RIP*RS**SCV*VFLSTPMTCT*TEGTTKIL** I*GMASRKKFCINISYMEKESYKSWKNSMPGSQS VQSLTMKSWSSMVGYQRPQT*IYSTV*RGTR*N LC*YHQRKQTETMTLTRSTIK*V*LLMHMEESK QMDLLLNT*QSMNGNRW*LYFLLLIIMKKAAIEE LTSNYVLVQLLDFSSTK*LKQRAFSLFAKEWIL WKTAPSRY*ERE*FHEKVTLLVLSNFKTTENQE NFL*ASGLFAWRTFWG*TYHGDPSVRIW*T*TKM ETLNTCPASRISALKNLYKRLILL*LKLCTDTD LTWKSYLMPLTLITQA*SPWKNFVPCGNFLVLT TMFTLMIPKSISLPT*WT*TKMEALTLMSF*RLS M*CIDMKT**NLMSPTLAKHK*ELPSGSLKQLG PNHKYSPFQHP*NS*SVAEKSRSQFIPQTDA*Y GFWKSLASCYW*D*VKCQ**DLVSALVPTYCQ*E TGLDLVVLS*VPPNQEARAV*KHPERNSYSTRE NY*A*HL*VTEGDRRNTRLFME*SLSIFK

Sequence NM_152224

TGAAGATTACAAATGAGACTGGGAAACCCTCTTCAATAAGACCTGTGTGATGATAGATTGTGTCCTGAGCCCGCAGGTCAGGCTGAAAGAGTCAACAACC AGCAAAGTGAAGATCTAGGAGTCTGTTCCCCTTGAACCTGTGTGGACCTGATCAAACCTCGAGGGAAAGGCTGGGAGAACACATCCCTGGTCAGCTGTAG GAAAGCCAGAGAGCATTTGAGAAGAGGCTGAAGCTTGAATTTTGCAAACACACAAGCCCTCTGCATTTCCCCAGAGAGAAGGTTTTTTTCTCGTCTTCAT TTCCTTTGAAACACCTGGGGTGAGGAAAAACCTCTACATTGGCCAAGCAGAAGAAACAGAATCTATGACTGAAGAGGATCGGCTAAGAGTGGTTCCTCGC AGCTTAAAGGGAGGCACTTTTCACACTCTGTCTTAAAATCAGAAGTTGAATTCATGAACACATATGATTTAGATAGAAGTCATGGGATGCAGCAGTTCTT CAACGAAAACCAGGAGATCTGACACATCACTGAGAGCTGCGTTGATCATCCAGAACTGGTACCGAGGTTACAAAGCTCGACTGAAGGCCAGACAACACTA TGCCCTCACCATCTTCCAGTCCATCGAATATGCTGATGAACAAGGCCAAATGCAGTTATCCACCTTCTTTTCCTTCATGTTGGAAAACTACACACATATA CATAAGGAAGAGCTAGAATTAAGAAATCAGTCTCTTGAAAGCGAACAGGACATGAGGGATAGATGGGATTATGTGGACTCGATAGATGTCCCAGACTCCT ATAATGGTCCTCGGCTACAATTTCCTCTCACTTGTACGGATATTGATTTACTTCTTGAGGCCTTCAAGGAACAACAGATACTTCATGCCCATTATGTCTT AGAGGTGCTATTTGAAACCAAGAAAGTCCTGAAGCAAATGCCGAATTTCACTCACATACAAACTTCTCCCTCCAAAGAGGTAACAATCTGTGGTGATTTG CATGGGAAACTGGATGATCTTTTTTTGATCTTCTACAAGAATGGTCTCCCCTCAGAGAGGAACCCGTATGTTTTTAATGGTGACTTTGTAGATCGAGGAA AGAATTCCATAGAGATCCTAATGATCCTGTGTGTGAGTTTTCTTGTCTACCCCAATGACCTGCACTTGAACAGAGGGAACCACGAAGATTTTATGATGAA TCTGAGGTATGGCTTCACGAAAGAAATTTTGCATAAATATAAGCTACATGGAAAAAGAATCTTACAAATCTTGGAAGAATTCTATGCCTGGCTCCCAATC GGTACAATCGTTGACAATGAAATCCTGGTCATCCATGGTGGGATATCAGAGACCACAGACTTGAATTTACTCCACCGTGTAGAGAGGAACAAGATGAAAT CTGTGCTGATACCACCAACGGAAACAAACAGAGACCATGACACTGACTCGAAGCACAATAAAATTATTGATATTCTGTGGAGTGATCCCAGAGGCAAAAA TGGCTGTTTTCCAAATACGTGCCGAGGAGGGGGCTGCTATTTTGGACCAGATGTTACTTCCAAGATTCTTAATAAATACCAGTTGAAGATGCTCATCAGG TCTCATGAATGTAAGCCCGAAGGGTATGAAATCTGTCATGATGGGAAGGTGGTGACTATATTTTCTGCTTCTAATTATTATGAAGAAGGCAGCAATCGAG GAGCTTACATCAAACTATGTTCTGGTACAACTCCTCGATTTTTCCAGTACCAAGTAACTAAAGCAACGTGCTTTCAGCCTCTTCGCCAAAGAGTGGATAC TATGGAAAACAGCGCCATCAAGATATTAAGAGAGAGAGTGATTTCACGAAAAAGTGACCTTACTCGTGCTTTCCAACTTCAAGACCACAGAAAATCAGGA AAACTTTCTGTGAGCCAGTGGGCTTTTTGCATGGAGAACATTTTGGGGCTGAACTTACCATGGAGATCCCTCAGTTCGAATCTGGTAAACATAGACCAAA ATGGAAACGTTGAATACATGTCCAGCTTCCAGAATATCCGCATTGAAAAACCTGTACAAGAGGCTCATTCTACTCTAGTTGAAACTCTGTACAGATACAG ATCTGACCTGGAAATCATATTTAATGCCATTGACACTGATCACTCAGGCCTGATCTCCGTGGAAGAATTTCGTGCCATGTGGAAACTTTTTAGTTCTCAC TACAATGTTCACATTGATGATTCCCAAGTCAATAAGCTTGCCAACATAATGGACTTGAACAAAGATGGAAGCATTGACTTTAATGAGTTTTTAAAGGCTT TCTATGTAGTGCATAGATATGAAGACTTGATGAAACCTGATGTCACCAACCTTGGCTAAACACAAATGAGAGCTTCCCTCAGGCTCCCTGAAACAGCTAG GCCCAAATCACAAGTACAGTCCTTTCCAACACCCCTGAAATTCATAGTCAGTAGCAGAGAAAAGCAGATCCCAATTCATCCCACAAACAGATGCATAGTA TGGGTTTTGGAAGTCCCTAGCAAGCTGTTATTGGTAAGATTAGGTTAAATGTCAGTAATAGGATTTGGTTTCAGCATTAGTACCTACATATTGCCAGTGA GAAACTGGGTTGGACCTAGTGGTGTTGTCGTGAGTGCCACCTAACCAGGAGGCCAGAGCGGTTTGAAAACATCCTGAAAGGAACTCATACAGCACAAGAG AAAACTACTAAGCTTGACATCTGTGAGTGACTGAGGGAGACAGGAGGAATACCAGGTTATTCATGGAATAAAGTCTTTCCATCTTTAAA

refseq_PPEF1.F1 (forward primer)
refseq_PPEF1.R1 (reverse primer)
Exon skipping and alternative donor or acceptor

Frame 0

*RLQMRLGNPLQ*DLCDDRLCPEPAGQAERVNN QQSEDLGVCSP*TCVDLIKPRGKGWENTSLVSCR KAREHLRRG*SLNFANTQALCISPERRFFSRLH FL*NTWGEEKPLHWPSRRNRIYD*RGSAKSGSS QLKGRHFSHSVLKSEVEFMNTYDLDRSHGMQQFF NENQEI*HITESCVDHPELVPRLQSSTEGQTTL CPHHLPVHRIC**TRPNAVIHLLFLHVGKLHTY T*GRARIKKSVS*KRTGHEG*MGLCGLDRCPRLL *WSSATISSHLYGY*FTS*GLQGTTDTSCPLCL RGAI*NQESPEANAEFHSHTNFSLQRGNNLW*F AWETG*SFFDLLQEWSPLREEPVCF*W*LCRSRK EFHRDPNDPVCEFSCLPQ*PALEQREPRRFYDE SEVWLHERNFA*I*ATWKKNLTNLGRILCLAPN RYNR*Q*NPGHPWWDIRDHRLEFTPPCREEQDEI CADTTNGNKQRP*H*LEAQ*NY*YSVE*SQRQK WLFSKYVPRRGLLFWTRCYFQDS**IPVEDAHQ VS*M*ARRV*NLS*WEGGDYIFCF*LL*RRQQSR SLHQTMFWYNSSIFPVPSN*SNVLSASSPKSGY YGKQRHQDIKRESDFTKK*PYSCFPTSRPQKIR KTFCEPVGFLHGEHFGAELTMEIPQFESGKHRPK WKR*IHVQLPEYPH*KTCTRGSFYSS*NSVQIQ I*PGNHI*CH*H*SLRPDLRGRISCHVETF*FS LQCSH**FPSQ*ACQHNGLEQRWKH*L**VFKGF LCSA*I*RLDET*CHQPWLNTNESFPQAP*NS* AQITSTVLSNTPEIHSQ*QRKADPNSSHKQMHS MGFGSP*QAVIGKIRLNVSNRIWFQH*YLHIASE KLGWT*WCCRECHLTRRPERFENILKGTHTAQE KTTKLDICE*LRETGGIPGYSWNKVFPSL

Frame 1

EDYK*DWETLFNKTCVMIDCVLSPQVRLKESTT SKVKI*ESVPLEPVWT*SNLEGKAGRTHPWSAV GKPESI*EEAEA*ILQTHKPSAFPQREGFFLVFI SFETPGVRKNLYIGQAEETESMTEEDRLRVVPR SLKGGTFHTLS*NQKLNS*THMI*IEVMGCSSS STKTRRSDTSLRAALIIQNWYRGYKARLKARQHY ALTIFQSIEYADEQGQMQLSTFFSFMLENYTHI HKEELELRNQSLESEQDMRDRWDYVDSIDVPDS YNGPRLQFPLTCTDIDLLLEAFKEQQILHAHYVL EVLFETKKVLKQMPNFTHIQTSPSKEVTICGDL HGKLDDLFLIFYKNGLPSERNPYVFNGDFVDRG KNSIEILMILCVSFLVYPNDLHLNRGNHEDFMMN LRYGFTKEILHKYKLHGKRILQILEEFYAWLPI GTIVDNEILVIHGGISETTDLNLLHRVERNKMK SVLIPPTETNRDHDTDSKHNKIIDILWSDPRGKN GCFPNTCRGGGCYFGPDVTSKILNKYQLKMLIR SHECKPEGYEICHDGKVVTIFSASNYYEEGSNR GAYIKLCSGTTPRFFQYQVTKATCFQPLRQRVDT MENSAIKILRERVISRKSDLTRAFQLQDHRKSG KLSVSQWAFCMENILGLNLPWRSLSSNLVNIDQ NGNVEYMSSFQNIRIEKPVQEAHSTLVETLYRYR SDLEIIFNAIDTDHSGLISVEEFRAMWKLFSSH YNVHIDDSQVNKLANIMDLNKDGSIDFNEFLKA FYVVHRYEDLMKPDVTNLG*TQMRASLRLPETAR PKSQVQSFPTPLKFIVSSREKQIPIHPTNRCIV WVLEVPSKLLLVRLG*MSVIGFGFSISTYILPV RNWVGPSGVVVSAT*PGGQSGLKTS*KELIQHKR KLLSLTSVSD*GRQEEYQVIHGIKSFHL*

Frame 2

KITNETGKPSSIRPV***IVS*ARRSG*KSQQP AK*RSRSLFPLNLCGPDQTSRERLGEHIPGQL* ESQRAFEKRLKLEFCKHTSPLHFPREKVFFSSS FPLKHLG*GKTSTLAKQKKQNL*LKRIG*EWFLA A*REALFTLCLKIRS*IHEHI*FR*KSWDAAVL QRKPGDLTHH*ELR*SSRTGTEVTKLD*RPDNT MPSPSSSPSNMLMNKAKCSYPPSFPSCWKTTHIY IRKS*N*EISLLKANRT*GIDGIMWTR*MSQTP IMVLGYNFLSLVRILIYFLRPSRNNRYFMPIMS *RCYLKPRKS*SKCRISLTYKLLPPKR*QSVVIC MGNWMIFF*SSTRMVSPQRGTRMFLMVTL*IEE RIP*RS**SCV*VFLSTPMTCT*TEGTTKIL** I*GMASRKKFCINISYMEKESYKSWKNSMPGSQS VQSLTMKSWSSMVGYQRPQT*IYSTV*RGTR*N LC*YHQRKQTETMTLTRSTIKLLIFCGVIPEAK MAVFQIRAEEGAAILDQMLLPRFLINTS*RCSSG LMNVSPKGMKSVMMGRW*LYFLLLIIMKKAAIE ELTSNYVLVQLLDFSSTK*LKQRAFSLFAKEWI LWKTAPSRY*ERE*FHEKVTLLVLSNFKTTENQE NFL*ASGLFAWRTFWG*TYHGDPSVRIW*T*TK METLNTCPASRISALKNLYKRLILL*LKLCTDT DLTWKSYLMPLTLITQA*SPWKNFVPCGNFLVLT TMFTLMIPKSISLPT*WT*TKMEALTLMSF*RL SM*CIDMKT**NLMSPTLAKHK*ELPSGSLKQL GPNHKYSPFQHP*NS*SVAEKSRSQFIPQTDA*Y GFWKSLASCYW*D*VKCQ**DLVSALVPTYCQ* ETGLDLVVLS*VPPNQEARAV*KHPERNSYSTR ENY*A*HL*VTEGDRRNTRLFME*SLSIFK