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Sequences

Sequence MRPS11.aAug05

MRPS11.u.f.6 (forward primer)
MRPS11.u.r.5 (reverse primer)
Intron retention

Frame 0

SPGTARTNHSHMEGVTHHLRTLKKGKNPLVNYS ESLIEHLNGNKNIQWT**RVDDFPFCPLPDRHSW YRRRRSCDCRCRRKLTGVNSSHAGCEKRGVAVP AVLDLAPDSRQGRGQNAGRDHLHRRSTAPRRCG QAES*TERGSQPHQVQHLPSHSRRGELSEVGRKE I*GDPNCTH*SIPQQHTDPGSLC***APCLCFL WHRGISECQEGHRHRSTDSRHSRSGES*TKGRD PHPSCGERPGARTLVCHARTDHGRPGSDLNHRQH PNPTQRLPPQEGSEAVMGRRPALGPDLKPQLQW DLVKCSLSELSRICLLEILQAVRESFASLHSGL CLHLQLEMGVPQK*ALHLLQEGSYRGSRGLGPNS ALRK*ISVPPVIILRFFAFRVT*FLIPLEKESV K*GEASDESKI*M*VAIYQTLLVSDISFLAPYP RFLELILVTFLINDL*FGPKLELFATYLWILMDF AIMGMFKVSPKHRIFYKWTVKLPTLKWQSSFTL HGLQQSQH*RESALKAGRVELYKT*FLARHGGS HL*PWHFGRPRRVDHLSPVRDQPGQHGETPSLLK IQKLTRHGGVRL*SQLLWRLRHENRLNPGGGGC SELRSSYCTPAQVTARLSQKNK*I*IKI

Frame 1

VPELLERTIRIWRG*PTISEH*KRERIPW*TTV KVLLSI*MEIKIFSGPNEE*MTFPSVPSPTGTH GTGAGAAVTVAADGN*LGSIQVMQAVRNAGSRFL RSWTWPQTAGRVVARTPAGTICTGARQLQDAAA KQKVEQNAAPSHTKFSIYPPIPGEESSLRWAGK KFEEIPIAHIKASHNNTQIQVVSASNEPLAFASC GTEGFRNAKKGTGIAAQTAGIAAAARAKQKGVI HIRVVVKGLGPGRLSAMHGLIMGGLEVISITDN TPIPHNGCRPRKARKL*WEGGLHLDLTSSLSSSG TL*NAPCQSSPEYACWRSFRQ*GRVLPPYTVAF ACTSSWRWVCPRSKLCISYKRGATGAAVA*AQT LL*ENKYLYHLS*F*DFLLSELRNS*FLLKKRV* NEVRPQMKVKYKCELLFTRHFWFQIFLF*PLTQ DF*S*S**LFLLMTYNLAPNWSFLPPTSGF*WI SPLWACLKLALNTGFSTSGQSNSPH*SGSHRLHS MGFSSPSTNERVP*KRGG*SCTKHDSWPGTVAH TCNPGTLGGQGGWIT*VQLETSLGNMVKPPLY* KYKN*PGMVVCACNPSYSGG*GMKIA*TQEVEAA VS*DHPTALQPR*QRDCLKKINKYK*KF

Frame 2

SRNC*NEPFAYGGGDPPSQNIKKGKESPGELQ* KSY*AFKWK*KYSVDLMKSR*LSLLSPPRQALM VPAPAQL*LSLQTETDWGQFKSCRL*ETRGRGS CGPGLGPRQPAGSWPERRPGPSAQALDSSKTLRP SRKLNRTRLPATPSSAFTLPFQERRAL*GGQER NLRRSQLHTLKHPTTTHRSR*SLLVMSPLPLLP VAQRDFGMPRRAQASQHRQQA*PQRRELNKRA*S TSELW*KAWGQDACLPCTD*SWAAWK*SQSQTT PQSHTTAAAPGRLGSCDGKEACTWT*PQASAPV GPCKMLPVRALQNMLVGDPSGSKGEFCLLTQWPL LAPPAGDGCAPEVSFASLTRGELQGQPWPRPKL CSEKINICTTCHNFEIFCFQSYVIPNSS*KREC EMR*GLR*K*NINVSCYLPDTSGFRYFFSSPLPK ISRANPSNFSY**LIIWPQIGAFCHLPLDSDGF RHYGHV*S*P*TQDFLQVDSQTPHTKVAVIVYT PWASAVPALTRECPKSGEGRVVQNMILGQARWLT PVTLALWEAKAGGSLESS*RPAWATW*NPLSTK NTKINQAWWCAPVIPATLEAEA*KSLEPRRWRL Q*AEIILLHSSPGDSETVSKK*ININKN

Sequence MRPS11.cAug05

AGTCCCGGAACTGCTAGAACGAACCATTCGCATATGGAGGGGGTGACCCACCATCTCAGAACATTAAAAAAGGGAAAGAATCCCCTGGTGAACTACAGTG AAAGTCTTATTGAGCATTTAAATGGAAATAAAAATATTCAGTGGACCTAATGAAGAGTAGATGACTTTCCCTTCTGTCCCCTCCCCGACAGGCACTCATG GTACCGGCGCCGGCGCAGCTGTGACTGTCGCTGCAGACGGAAACTGACTGGGGTCAATTCAAGTCATGCAGGCTGTGAGAAACGCGGGGTCGCGGTTCCT GCGGTCCTGGACTTGGCCCCAGACAGCCGGCAGGGTCGTGGCCAGAACGCCGGCCGGGACCATCTGCACAGGCGCTCGACAGCTCCAAGACGCTGCGGCC AAGCAGAAAGTTGAACAGAACGCGGCTCCCAGCCACACCAAGTTCAGGTGAGCCCCACTTGGACCAGCCCTCTGGAGACCCGCAACCCCTGACTCTTGCC CGACACCCTCCAGAGTCAGAACCAGTGAATTTTCAGCTATGTCACTTGCTATCCGTGGGACCTTATGCAAATAAATCTGAGCCTCAGCCTTCTCATCTAA AAATGCGGATAATGCTGAGAGAGGTTGTGAGAATCAGATGAGCCGTGGTACAGAGTAAATGTTCAGTGAACATTCGTTAAATCAATGAGTGAATGTGAGA TATCCATAACATGTATCAGCGTTCTTTTCTTCTGAGATGGAGATCTTTTCAGACCAATAACCTTCCCTGCCTCCAAAACAAAATGGGGAGGTAGAGGGCG CTAGCGATGGAACAGATGTTCCTGCACGTCTTACGGATGGTCCAGGGTGGGTTTTGTGCTCAGCCCTAGGAACTGGCATCTTGCTTCCCACCAGTGCCAC CACCTCTGTATGCTGTATACACATCCACTTAACTTCACATCCATTTAACAAACATTTACCAAGAATCTACTATGAGTGAGACACCATGCTAGGTGCCGTG AATACAGATACAAAAGATCATTCCTCCCCACAAGTAGTTCACAGTCTTTGAGGGAAGACAAACATGCAAACATTTTAACCATAATCTGCTCAATAATATA ATGGAGGTAAGCATTGGTTGGAAGTATGAAATCATAAGTGTCTAACTCCTGGCCGGGTGCAGTAGCTCATGCCTTTAATCCCAGCACTTTAGGCGGCCAA GGTGGGCGAATTACTTGAGGTCAGGAGATCGAGACCAGCCTGGCCAACATGGCGAAACCCCGTCTCCACTAAAAGCACAAAAACTAGCCAGGCGTGATGT CTGGCACCTGTAATCCCAGCCACTCAGGAGGCTGAAGTAGAAGAATCGCATGAACCCAGGGAGCGGAGGTTGCAGTGAGCCAAGATCACGCCACTGTACT CCAGCCTGGGTGACAGATTGAGACTCTGTCTCAAAGAAAAAAAAAAAAAAAAAGAATAAGTGTCTCATTCCTGAGGAAATCAGGCAAGACCATGGAGAAA AGAACATGGAGCTCAGAAGTGAATGGGAGTTCATCTGGACAAGTTGAAGTGGGTCATTGGAGACAAAGCATTTACCCTCCCATTCCAGGAGAGGAGAGCT CTCTGAGGTGGGCAGGAAAGAAATTTGAGGAGATCCCAATTGCACACATTAAAGCATCCCACAACAACACACAGATCCAGGTAGTCTCTGCTAGTAATGA GCCCCTTGCCTTTGCTTCCTGTGGCACAGAGGGATTTCGGAATGCCAAGAAGGGCACAGGCATCGCAGCACAGACAGCAGGCATAGCCGCAGCGGCGAGA GCTAAACAAAAGGGCGTGATCCACATCCGAGTTGTGGTGAAAGGCCTGGGGCCAGGACGCTTGTCTGCCATGCACGGACTGATCATGGGCGGCCTGGAAG TGATCTCAATCACAGACAACACCCCAATCCCACACAACGGCTGCCGCCCCAGGAAGGCTCGGAAGCTGTGATGGGAAGGAGGCCTGCACTTGGACCTGAC CTCAAGCCTCAGCTCCAGTGGGACCTTGTAAAATGCTCCCTGTCAGAGCTCTCCAGAATATGCTTGTTGGAGATCCTTCAGGCAGTAAGGGAGAGTTTTG CCTCCTTACACAGTGGCCTTTGCTTGCACCTCCAGCTGGAGATGGGTGTGCCCCAGAAGTAAGCTTTGCATCTCTTACAAGAGGGGAGCTACAGGGGCAG CCGTGGCCTAGGCCCAAACTCTGCTCTGAGAAAATAAATATCTGTACCACCTGTCATAATTTTGAGATTTTTTGCTTTCAGAGTTACGTAATTCCTAATT CCTCTTGAAAAAGAGAGTGTGAAATGAGGTGAGGCCTCAGATGAAAGTAAAATATAAATGTGAGTTGCTATTTACCAGACACTTCTGGTTTCAGATATTT CTTTTCTAGCCCCTTACCCAAGATTTCTAGAGCTAATCCTAGTAACTTTTCTTATTAATGACTTATAATTTGGCCCCAAATTGGAGCTTTTTGCCACCTA CCTCTGGATTCTGATGGATTTCGCCATTATGGGCATGTTTAAAGTTAGCCCTAAACACAGGATTTTCTACAAGTGGACAGTCAAACTCCCCACACTAAAG TGGCAGTCATCGTTTACACTCCATGGGCTTCAGCAGTCCCAGCACTAACGAGAGAGTGCCCTAAAAGCGGGGAGGGTAGAGTTGTACAAAACATGATTCT TGGCCAGGCACGGTGGCTCACACCTGTAACCCTGGCACTTTGGGAGGCCAAGGCGGGTGGATCACTTGAGTCCAGTTAGAGACCAGCCTGGGCAACATGG TGAAACCCCCTCTCTACTAAAAATACAAAAATTAACCAGGCATGGTGGTGTGCGCCTGTAATCCCAGCTACTCTGGAGGCTGAGGCATGAAAATCGCTTG AACCCAGGAGGTGGAGGCTGCAGTGAGCTGAGATCATCCTACTGCACTCCAGCCCAGGTGACAGCGAGACTGTCTCAAAAAAATAAATAAATATAAATAA AAATTT

MRPS11.u.f.6 (forward primer)
MRPS11.u.r.5 (reverse primer)
Intron retention

Frame 0

SPGTARTNHSHMEGVTHHLRTLKKGKNPLVNYS ESLIEHLNGNKNIQWT**RVDDFPFCPLPDRHSW YRRRRSCDCRCRRKLTGVNSSHAGCEKRGVAVP AVLDLAPDSRQGRGQNAGRDHLHRRSTAPRRCG QAES*TERGSQPHQVQVSPTWTSPLETRNP*LLP DTLQSQNQ*IFSYVTCYPWDLMQINLSLSLLI* KCG*C*ERL*ESDEPWYRVNVQ*TFVKSMSECE ISITCISVLFF*DGDLFRPITFPASKTKWGGRGR *RWNRCSCTSYGWSRVGFVLSPRNWHLASHQCH HLCMLYTHPLNFTSI*QTFTKNLL*VRHHARCR EYRYKRSFLPTSSSQSLREDKHANILTIICSII* WR*ALVGSMKS*VSNSWPGAVAHAFNPSTLGGQ GGRIT*GQEIETSLANMAKPRLH*KHKN*PGVM SGTCNPSHSGG*SRRIA*TQGAEVAVSQDHATVL QPG*QIETLSQRKKKKKRISVSFLRKSGKTMEK RTWSSEVNGSSSGQVEVGHWRQSIYPPIPGEES SLRWAGKKFEEIPIAHIKASHNNTQIQVVSASNE PLAFASCGTEGFRNAKKGTGIAAQTAGIAAAAR AKQKGVIHIRVVVKGLGPGRLSAMHGLIMGGLE VISITDNTPIPHNGCRPRKARKL*WEGGLHLDLT SSLSSSGTL*NAPCQSSPEYACWRSFRQ*GRVL PPYTVAFACTSSWRWVCPRSKLCISYKRGATGA AVA*AQTLL*ENKYLYHLS*F*DFLLSELRNS*F LLKKRV*NEVRPQMKVKYKCELLFTRHFWFQIF LF*PLTQDF*S*S**LFLLMTYNLAPNWSFLPP TSGF*WISPLWACLKLALNTGFSTSGQSNSPH*S GSHRLHSMGFSSPSTNERVP*KRGG*SCTKHDS WPGTVAHTCNPGTLGGQGGWIT*VQLETSLGNM VKPPLY*KYKN*PGMVVCACNPSYSGG*GMKIA* TQEVEAAVS*DHPTALQPR*QRDCLKKINKYK* KF

Frame 1

VPELLERTIRIWRG*PTISEH*KRERIPW*TTV KVLLSI*MEIKIFSGPNEE*MTFPSVPSPTGTH GTGAGAAVTVAADGN*LGSIQVMQAVRNAGSRFL RSWTWPQTAGRVVARTPAGTICTGARQLQDAAA KQKVEQNAAPSHTKFR*APLGPALWRPATPDSC PTPSRVRTSEFSAMSLAIRGTLCK*I*ASAFSSK NADNAERGCENQMSRGTE*MFSEHSLNQ*VNVR YP*HVSAFFSSEMEIFSDQ*PSLPPKQNGEVEG ASDGTDVPARLTDGPGWVLCSALGTGILLPTSAT TSVCCIHIHLTSHPFNKHLPRIYYE*DTMLGAV NTDTKDHSSPQVVHSL*GKTNMQTF*P*SAQ*Y NGGKHWLEV*NHKCLTPGRVQ*LMPLIPAL*AAK VGELLEVRRSRPAWPTWRNPVSTKSTKTSQA*C LAPVIPATQEAEVEESHEPRERRLQ*AKITPLY SSLGDRLRLCLKEKKKKKE*VSHS*GNQARPWRK EHGAQK*MGVHLDKLKWVIGDKAFTLPFQERRA L*GGQERNLRRSQLHTLKHPTTTHRSR*SLLVM SPLPLLPVAQRDFGMPRRAQASQHRQQA*PQRRE LNKRA*STSELW*KAWGQDACLPCTD*SWAAWK *SQSQTTPQSHTTAAAPGRLGSCDGKEACTWT* PQASAPVGPCKMLPVRALQNMLVGDPSGSKGEFC LLTQWPLLAPPAGDGCAPEVSFASLTRGELQGQ PWPRPKLCSEKINICTTCHNFEIFCFQSYVIPN SS*KRECEMR*GLR*K*NINVSCYLPDTSGFRYF FSSPLPKISRANPSNFSY**LIIWPQIGAFCHL PLDSDGFRHYGHV*S*P*TQDFLQVDSQTPHTK VAVIVYTPWASAVPALTRECPKSGEGRVVQNMIL GQARWLTPVTLALWEAKAGGSLESS*RPAWATW *NPLSTKNTKINQAWWCAPVIPATLEAEA*KSL EPRRWRLQ*AEIILLHSSPGDSETVSKK*ININK N

Frame 2

SRNC*NEPFAYGGGDPPSQNIKKGKESPGELQ* KSY*AFKWK*KYSVDLMKSR*LSLLSPPRQALM VPAPAQL*LSLQTETDWGQFKSCRL*ETRGRGS CGPGLGPRQPAGSWPERRPGPSAQALDSSKTLRP SRKLNRTRLPATPSSGEPHLDQPSGDPQPLTLA RHPPESEPVNFQLCHLLSVGPYANKSEPQPSHL KMRIMLREVVRIR*AVVQSKCSVNIR*INE*M*D IHNMYQRSFLLRWRSFQTNNLPCLQNKMGR*RA LAMEQMFLHVLRMVQGGFCAQP*ELASCFPPVP PPLYAVYTST*LHIHLTNIYQESTMSETPC*VP* IQIQKIIPPHK*FTVFEGRQTCKHFNHNLLNNI MEVSIGWKYEIISV*LLAGCSSSCL*SQHFRRP RWANYLRSGDRDQPGQHGETPSPLKAQKLARRDV WHL*SQPLRRLK*KNRMNPGSGGCSEPRSRHCT PAWVTD*DSVSKKKKKKKNKCLIPEEIRQDHGE KNMELRSEWEFIWTS*SGSLETKHLPSHSRRGEL SEVGRKEI*GDPNCTH*SIPQQHTDPGSLC*** APCLCFLWHRGISECQEGHRHRSTDSRHSRSGE S*TKGRDPHPSCGERPGARTLVCHARTDHGRPGS DLNHRQHPNPTQRLPPQEGSEAVMGRRPALGPD LKPQLQWDLVKCSLSELSRICLLEILQAVRESF ASLHSGLCLHLQLEMGVPQK*ALHLLQEGSYRGS RGLGPNSALRK*ISVPPVIILRFFAFRVT*FLI PLEKESVK*GEASDESKI*M*VAIYQTLLVSDI SFLAPYPRFLELILVTFLINDL*FGPKLELFATY LWILMDFAIMGMFKVSPKHRIFYKWTVKLPTLK WQSSFTLHGLQQSQH*RESALKAGRVELYKT*F LARHGGSHL*PWHFGRPRRVDHLSPVRDQPGQHG ETPSLLKIQKLTRHGGVRL*SQLLWRLRHENRL NPGGGGCSELRSSYCTPAQVTARLSQKNK*I*I KI

Sequence MRPS11.eAug05

MRPS11.u.f.6 (forward primer)
MRPS11.u.r.5 (reverse primer)
Intron retention

Frame 0

SPGTARTNHSHMEGVTHHLRTLKKGKNPLVNYS ESLIEHLNGNKNIQWT**RVDDFPFCPLPDRHSW YRRRRSCDCRCRRKLTGVNSSHAGCEKRGVAVP AVLDLAPDSRQGRGQNAGRDHLHRRSTAPRRCG QAES*TERGSQPHQVQERRAL*GGQERNLRRSQL HTLKHPTTTHRSR*SLLVMSPLPLLPVAQRDFG MPRRAQASQHRQQA*PQRRELNKRA*STSELW* KAWGQDACLPCTD*SWAAWK*SQSQTTPQSHTTA AAPGRLGSCDGKEACTWT*PQASAPVGPCKMLP VRALQNMLVGDPSGSKGEFCLLTQWPLLAPPAG DGCAPEVSFASLTRGELQGQPWPRPKLCSEKINI CTTCHNFEIFCFQSYVIPNSS*KRECEMR*GLR *K*NINVSCYLPDTSGFRYFFSSPLPKISRANP SNFSY**LIIWPQIGAFCHLPLDSDGFRHYGHV* S*P*TQDFLQVDSQTPHTKVAVIVYTPWASAVP ALTRECPKSGEGRVVQNMILGQARWLTPVTLAL WEAKAGGSLESS*RPAWATW*NPLSTKNTKINQA WWCAPVIPATLEAEA*KSLEPRRWRLQ*AEIIL LHSSPGDSETVSKK*ININKN

Frame 1

VPELLERTIRIWRG*PTISEH*KRERIPW*TTV KVLLSI*MEIKIFSGPNEE*MTFPSVPSPTGTH GTGAGAAVTVAADGN*LGSIQVMQAVRNAGSRFL RSWTWPQTAGRVVARTPAGTICTGARQLQDAAA KQKVEQNAAPSHTKFRRGELSEVGRKEI*GDPN CTH*SIPQQHTDPGSLC***APCLCFLWHRGISE CQEGHRHRSTDSRHSRSGES*TKGRDPHPSCGE RPGARTLVCHARTDHGRPGSDLNHRQHPNPTQR LPPQEGSEAVMGRRPALGPDLKPQLQWDLVKCSL SELSRICLLEILQAVRESFASLHSGLCLHLQLE MGVPQK*ALHLLQEGSYRGSRGLGPNSALRK*I SVPPVIILRFFAFRVT*FLIPLEKESVK*GEASD ESKI*M*VAIYQTLLVSDISFLAPYPRFLELIL VTFLINDL*FGPKLELFATYLWILMDFAIMGMF KVSPKHRIFYKWTVKLPTLKWQSSFTLHGLQQSQ H*RESALKAGRVELYKT*FLARHGGSHL*PWHF GRPRRVDHLSPVRDQPGQHGETPSLLKIQKLTR HGGVRL*SQLLWRLRHENRLNPGGGGCSELRSSY CTPAQVTARLSQKNK*I*IKI

Frame 2

SRNC*NEPFAYGGGDPPSQNIKKGKESPGELQ* KSY*AFKWK*KYSVDLMKSR*LSLLSPPRQALM VPAPAQL*LSLQTETDWGQFKSCRL*ETRGRGS CGPGLGPRQPAGSWPERRPGPSAQALDSSKTLRP SRKLNRTRLPATPSSGEESSLRWAGKKFEEIPI AHIKASHNNTQIQVVSASNEPLAFASCGTEGFR NAKKGTGIAAQTAGIAAAARAKQKGVIHIRVVVK GLGPGRLSAMHGLIMGGLEVISITDNTPIPHNG CRPRKARKL*WEGGLHLDLTSSLSSSGTL*NAP CQSSPEYACWRSFRQ*GRVLPPYTVAFACTSSWR WVCPRSKLCISYKRGATGAAVA*AQTLL*ENKY LYHLS*F*DFLLSELRNS*FLLKKRV*NEVRPQ MKVKYKCELLFTRHFWFQIFLF*PLTQDF*S*S* *LFLLMTYNLAPNWSFLPPTSGF*WISPLWACL KLALNTGFSTSGQSNSPH*SGSHRLHSMGFSSP STNERVP*KRGG*SCTKHDSWPGTVAHTCNPGTL GGQGGWIT*VQLETSLGNMVKPPLY*KYKN*PG MVVCACNPSYSGG*GMKIA*TQEVEAAVS*DHP TALQPR*QRDCLKKINKYK*KF

Sequence MRPS11.fAug05

MRPS11.u.f.6 (forward primer)
MRPS11.u.r.5 (reverse primer)
Intron retention

Frame 0

SPGTARTNHSHMEGVTHHLRTLKKGKNPLVNYS ESLIEHLNGNKNIQWT**RVDDFPFCPLPDRHSW YRRRRSCDCRCRRKLTGVNSSHAGCEKRGVAVP AVLDLAPDSRQGRGQNAGRDHLHRRSTAPRRCG QAES*TERGSQPHQVQHTDPGSLC***APCLCFL WHRGISECQEGHRHRSTDSRHSRSGES*TKGRD PHPSCGERPGARTLVCHARTDHGRPGSDLNHRQ HPNPTQRLPPQEGSEAVMGRRPALGPDLKPQLQW DLVKCSLSELSRICLLEILQAVRESFASLHSGL CLHLQLEMGVPQK*ALHLLQEGSYRGSRGLGPN SALRK*ISVPPVIILRFFAFRVT*FLIPLEKESV K*GEASDESKI*M*VAIYQTLLVSDISFLAPYP RFLELILVTFLINDL*FGPKLELFATYLWILMD FAIMGMFKVSPKHRIFYKWTVKLPTLKWQSSFTL HGLQQSQH*RESALKAGRVELYKT*FLARHGGS HL*PWHFGRPRRVDHLSPVRDQPGQHGETPSLL KIQKLTRHGGVRL*SQLLWRLRHENRLNPGGGGC SELRSSYCTPAQVTARLSQKNK*I*IKI

Frame 1

VPELLERTIRIWRG*PTISEH*KRERIPW*TTV KVLLSI*MEIKIFSGPNEE*MTFPSVPSPTGTH GTGAGAAVTVAADGN*LGSIQVMQAVRNAGSRFL RSWTWPQTAGRVVARTPAGTICTGARQLQDAAA KQKVEQNAAPSHTKFSTQIQVVSASNEPLAFAS CGTEGFRNAKKGTGIAAQTAGIAAAARAKQKGVI HIRVVVKGLGPGRLSAMHGLIMGGLEVISITDN TPIPHNGCRPRKARKL*WEGGLHLDLTSSLSSS GTL*NAPCQSSPEYACWRSFRQ*GRVLPPYTVAF ACTSSWRWVCPRSKLCISYKRGATGAAVA*AQT LL*ENKYLYHLS*F*DFLLSELRNS*FLLKKRV *NEVRPQMKVKYKCELLFTRHFWFQIFLF*PLTQ DF*S*S**LFLLMTYNLAPNWSFLPPTSGF*WI SPLWACLKLALNTGFSTSGQSNSPH*SGSHRLH SMGFSSPSTNERVP*KRGG*SCTKHDSWPGTVAH TCNPGTLGGQGGWIT*VQLETSLGNMVKPPLY* KYKN*PGMVVCACNPSYSGG*GMKIA*TQEVEA AVS*DHPTALQPR*QRDCLKKINKYK*KF

Frame 2

SRNC*NEPFAYGGGDPPSQNIKKGKESPGELQ* KSY*AFKWK*KYSVDLMKSR*LSLLSPPRQALM VPAPAQL*LSLQTETDWGQFKSCRL*ETRGRGS CGPGLGPRQPAGSWPERRPGPSAQALDSSKTLRP SRKLNRTRLPATPSSAHRSR*SLLVMSPLPLLP VAQRDFGMPRRAQASQHRQQA*PQRRELNKRA* STSELW*KAWGQDACLPCTD*SWAAWK*SQSQTT PQSHTTAAAPGRLGSCDGKEACTWT*PQASAPV GPCKMLPVRALQNMLVGDPSGSKGEFCLLTQWP LLAPPAGDGCAPEVSFASLTRGELQGQPWPRPKL CSEKINICTTCHNFEIFCFQSYVIPNSS*KREC EMR*GLR*K*NINVSCYLPDTSGFRYFFSSPLP KISRANPSNFSY**LIIWPQIGAFCHLPLDSDGF RHYGHV*S*P*TQDFLQVDSQTPHTKVAVIVYT PWASAVPALTRECPKSGEGRVVQNMILGQARWL TPVTLALWEAKAGGSLESS*RPAWATW*NPLSTK NTKINQAWWCAPVIPATLEAEA*KSLEPRRWRL Q*AEIILLHSSPGDSETVSKK*ININKN

Sequence MRPS11.hAug05

MRPS11.u.f.6 (forward primer)
MRPS11.u.r.5 (reverse primer)
Intron retention

Frame 0

SPGTARTNHSHMEGVTHHLRTLKKGKNPLVNYS ESLIEHLNGNKNIQWT**RVDDFPFCPLPDRHSW YRRRRSCDCRCRRKLTGVNSSHAGCEKRGVAVP AVLDLAPDSRQGRGQNAGRDHLHRRSTAPRRCG QAES*TERGSQPHQVQHLPSHSRRGELSEVGRKE I*GDPNCTH*SIPQQRDFGMPRRAQASQHRQQA *PQRRELNKRA*STSELW*KAWGQDACLPCTD* SWAAWK*SQSQTTPQSHTTAAAPGRLGSCDGKEA CTWT*PQASAPVGPCKMLPVRALQNMLVGDPSG SKGEFCLLTQWPLLAPPAGDGCAPEVSFASLTR GELQGQPWPRPKLCSEKINICTTCHNFEIFCFQS YVIPNSS*KRECEMR*GLR*K*NINVSCYLPDT SGFRYFFSSPLPKISRANPSNFSY**LIIWPQI GAFCHLPLDSDGFRHYGHV*S*P*TQDFLQVDSQ TPHTKVAVIVYTPWASAVPALTRECPKSGEGRV VQNMILGQARWLTPVTLALWEAKAGGSLESS*R PAWATW*NPLSTKNTKINQAWWCAPVIPATLEAE A*KSLEPRRWRLQ*AEIILLHSSPGDSETVSKK *ININKN

Frame 1

VPELLERTIRIWRG*PTISEH*KRERIPW*TTV KVLLSI*MEIKIFSGPNEE*MTFPSVPSPTGTH GTGAGAAVTVAADGN*LGSIQVMQAVRNAGSRFL RSWTWPQTAGRVVARTPAGTICTGARQLQDAAA KQKVEQNAAPSHTKFSIYPPIPGEESSLRWAGK KFEEIPIAHIKASHNKGISECQEGHRHRSTDSRH SRSGES*TKGRDPHPSCGERPGARTLVCHARTD HGRPGSDLNHRQHPNPTQRLPPQEGSEAVMGRR PALGPDLKPQLQWDLVKCSLSELSRICLLEILQA VRESFASLHSGLCLHLQLEMGVPQK*ALHLLQE GSYRGSRGLGPNSALRK*ISVPPVIILRFFAFR VT*FLIPLEKESVK*GEASDESKI*M*VAIYQTL LVSDISFLAPYPRFLELILVTFLINDL*FGPKL ELFATYLWILMDFAIMGMFKVSPKHRIFYKWTV KLPTLKWQSSFTLHGLQQSQH*RESALKAGRVEL YKT*FLARHGGSHL*PWHFGRPRRVDHLSPVRD QPGQHGETPSLLKIQKLTRHGGVRL*SQLLWRL RHENRLNPGGGGCSELRSSYCTPAQVTARLSQKN K*I*IKI

Frame 2

SRNC*NEPFAYGGGDPPSQNIKKGKESPGELQ* KSY*AFKWK*KYSVDLMKSR*LSLLSPPRQALM VPAPAQL*LSLQTETDWGQFKSCRL*ETRGRGS CGPGLGPRQPAGSWPERRPGPSAQALDSSKTLRP SRKLNRTRLPATPSSAFTLPFQERRAL*GGQER NLRRSQLHTLKHPTTKGFRNAKKGTGIAAQTAG IAAAARAKQKGVIHIRVVVKGLGPGRLSAMHGLI MGGLEVISITDNTPIPHNGCRPRKARKL*WEGG LHLDLTSSLSSSGTL*NAPCQSSPEYACWRSFR Q*GRVLPPYTVAFACTSSWRWVCPRSKLCISYKR GATGAAVA*AQTLL*ENKYLYHLS*F*DFLLSE LRNS*FLLKKRV*NEVRPQMKVKYKCELLFTRH FWFQIFLF*PLTQDF*S*S**LFLLMTYNLAPNW SFLPPTSGF*WISPLWACLKLALNTGFSTSGQS NSPH*SGSHRLHSMGFSSPSTNERVP*KRGG*S CTKHDSWPGTVAHTCNPGTLGGQGGWIT*VQLET SLGNMVKPPLY*KYKN*PGMVVCACNPSYSGG* GMKIA*TQEVEAAVS*DHPTALQPR*QRDCLKK INKYK*KF

Sequence MRPS11.jAug05

MRPS11.u.f.6 (forward primer)
MRPS11.u.r.5 (reverse primer)
Intron retention

Frame 0

SPGTARTNHSHMEGVTHHLRTLKKGKNPLVNYS ESLIEHLNGNKNIQWT**RVDDFPFCPLPDRHSW YRRRRSCDCRCRRKLTGVNSSHAGCEKRGVAVP AVLDLAPDSRQGRGQNAGRDHLHRRSTAPRRCG QAES*TERGSQPHQVQGQGRWGVCMKIPSHSGKS PDVSEVSKSRNSIISTAVTHAVVAPEGLKRNGG GSHLRSSRGHRAVIF*PCVVFL*FLKSRDNFK* NLSSNC

Frame 1

VPELLERTIRIWRG*PTISEH*KRERIPW*TTV KVLLSI*MEIKIFSGPNEE*MTFPSVPSPTGTH GTGAGAAVTVAADGN*LGSIQVMQAVRNAGSRFL RSWTWPQTAGRVVARTPAGTICTGARQLQDAAA KQKVEQNAAPSHTKFRDKEDGEYA*KSLLIAES PQMCLKSASQETAS*AQQSHMRWWHQKD*KGMVG AAT*EAAGGTELLFFNHVLYFFDF*KVETILNK IFLLIA

Frame 2

SRNC*NEPFAYGGGDPPSQNIKKGKESPGELQ* KSY*AFKWK*KYSVDLMKSR*LSLLSPPRQALM VPAPAQL*LSLQTETDWGQFKSCRL*ETRGRGS CGPGLGPRQPAGSWPERRPGPSAQALDSSKTLRP SRKLNRTRLPATPSSGTRKMGSMHENPFS*RKV PRCV*SQQVKKQHHKHSSHTCGGGTRRTEKEWW GQPLKKQQGAQSCYFLTMCCISLIFKKSRQF*IK SFF*L

Sequence MRPS11.dAug05

TCAAGTCATGCAGGCTGTGAGAAACGCGGGGTCGCGGTTCCTGCGGTCCTGGACTTGGCCCCAGACAGCCGGGTAACAAATGACTGCCCCCTCGAGCCCA CCGCCACCTCCAGGACTATGCTCCTACTCGTGTCCCTTGAGCCACCCGGGCCCCAGTGACCGTTAGGCCGTGGCCCTCACCGAGCTTTTCTTCCCAGCAG GGTCGTGGCCAGAACGCCGGCCGGGACCATCTGCACAGGCGCTCGACAGCTCCAAGACGCTGCGGCCAAGCAGAAAGTTGAACAGAACGCGGCTCCCAGC CACACCAAGTTCAGCATTTACCCTCCCATTCCAGGAGAGGAGAGCTCTCTGAGGTGGGCAGGAAAGAAATTTGAGGAGATCCCAATTGCACACATTAAAG CATCCCACAACAACACACAGATCCAGGTAGTCTCTGCTAGTAATGAGCCCCTTGCCTTTGCTTCCTGTGGCACAGAGGGATTTCGGAATGCCAAGAAGGG CACAGGCATCGCAGCACAGACAGCAGGCATAGCCGCAGCGGCGAGAGCTAAACAAAAGGGCGTGATCCACATCCGAGTTGTGGTGAAAGGCCTGGGGCCA GGACGCTTGTCTGCCATGCACGGACTGATCATGGGCGGCCTGGAAGTGATCTCAATCACAGACAACACCCCAATCCCACACAACGGCTGCCGCCCCAGGA AGGCTCGGAAGCTGTGATGGGAAGGAGGCCTGCACTTGGACCTGACCTCAAGCCTCAGCTCCAGTGGGACCTTGTAAAATGCTCCCTGTCAGAGCTCTCC AGAATATGCTTGTTGGAGATCCTTCAGGCAGTAAGGGAGAGTTTTGCCTCCTTACACAGTGGCCTTTGCTTGCACCTCCAGCTGGAGATGGGTGTGCCCC AGAAGTAAGCTTTGCATCTCTTACAAGAGGGGAGCTACAGGGGCAGCCGTGGCCTAGGCCCAAACTCTGCTCTGAGAAAATAAATATCTGTACCACCTGT CATAATTTTGAGATTTTTTGCTTTCAGAGTTACGTAATTCCTAATTCCTCTTGAAAAAGAGAGTGTGAAATGAGGTGAGGCCTCAGATGAAAGTAAAATA TAAATGTGAGTTGCTATTTACCAGACACTTCTGGTTTCAGATATTTCTTTTCTAGCCCCTTACCCAAGATTTCTAGAGCTAATCCTAGTAACTTTTCTTA TTAATGACTTATAATTTGGCCCCAAATTGGAGCTTTTTGCCACCTACCTCTGGATTCTGATGGATTTCGCCATTATGGGCATGTTTAAAGTTAGCCCTAA ACACAGGATTTTCTACAAGTGGACAGTCAAACTCCCCACACTAAAGTGGCAGTCATCGTTTACACTCCATGGGCTTCAGCAGTCCCAGCACTAACGAGAG AGTGCCCTAAAAGCGGGGAGGGTAGAGTTGTACAAAACATGATTCTTGGCCAGGCACGGTGGCTCACACCTGTAACCCTGGCACTTTGGGAGGCCAAGGC GGGTGGATCACTTGAGTCCAGTTAGAGACCAGCCTGGGCAACATGGTGAAACCCCCTCTCTACTAAAAATACAAAAATTAACCAGGCATGGTGGTGTGCG CCTGTAATCCCAGCTACTCTGGAGGCTGAGGCATGAAAATCGCTTGAACCCAGGAGGTGGAGGCTGCAGTGAGCTGAGATCATCCTACTGCACTCCAGCC CAGGTGACAGCGAGACTGTCTCAAAAAAATAAATAAATATAAATAAAAATTT

MRPS11.u.f.6 (forward primer)
MRPS11.u.r.5 (reverse primer)
Intron retention

Frame 0

SSHAGCEKRGVAVPAVLDLAPDSRVTNDCPLEP TATSRTMLLLVSLEPPGPQ*PLGRGPHRAFLPSR VVARTPAGTICTGARQLQDAAAKQKVEQNAAPS HTKFSIYPPIPGEESSLRWAGKKFEEIPIAHIK ASHNNTQIQVVSASNEPLAFASCGTEGFRNAKKG TGIAAQTAGIAAAARAKQKGVIHIRVVVKGLGP GRLSAMHGLIMGGLEVISITDNTPIPHNGCRPR KARKL*WEGGLHLDLTSSLSSSGTL*NAPCQSSP EYACWRSFRQ*GRVLPPYTVAFACTSSWRWVCP RSKLCISYKRGATGAAVA*AQTLL*ENKYLYHL S*F*DFLLSELRNS*FLLKKRV*NEVRPQMKVKY KCELLFTRHFWFQIFLF*PLTQDF*S*S**LFL LMTYNLAPNWSFLPPTSGF*WISPLWACLKLAL NTGFSTSGQSNSPH*SGSHRLHSMGFSSPSTNER VP*KRGG*SCTKHDSWPGTVAHTCNPGTLGGQG GWIT*VQLETSLGNMVKPPLY*KYKN*PGMVVC ACNPSYSGG*GMKIA*TQEVEAAVS*DHPTALQP R*QRDCLKKINKYK*KF

Frame 1

QVMQAVRNAGSRFLRSWTWPQTAG*QMTAPSSP PPPPGLCSYSCPLSHPGPSDR*AVALTELFFPA GSWPERRPGPSAQALDSSKTLRPSRKLNRTRLPA TPSSAFTLPFQERRAL*GGQERNLRRSQLHTLK HPTTTHRSR*SLLVMSPLPLLPVAQRDFGMPRR AQASQHRQQA*PQRRELNKRA*STSELW*KAWGQ DACLPCTD*SWAAWK*SQSQTTPQSHTTAAAPG RLGSCDGKEACTWT*PQASAPVGPCKMLPVRAL QNMLVGDPSGSKGEFCLLTQWPLLAPPAGDGCAP EVSFASLTRGELQGQPWPRPKLCSEKINICTTC HNFEIFCFQSYVIPNSS*KRECEMR*GLR*K*N INVSCYLPDTSGFRYFFSSPLPKISRANPSNFSY **LIIWPQIGAFCHLPLDSDGFRHYGHV*S*P* TQDFLQVDSQTPHTKVAVIVYTPWASAVPALTR ECPKSGEGRVVQNMILGQARWLTPVTLALWEAKA GGSLESS*RPAWATW*NPLSTKNTKINQAWWCA PVIPATLEAEA*KSLEPRRWRLQ*AEIILLHSS PGDSETVSKK*ININKN

Frame 2

KSCRL*ETRGRGSCGPGLGPRQPGNK*LPPRAH RHLQDYAPTRVP*ATRAPVTVRPWPSPSFSSQQ GRGQNAGRDHLHRRSTAPRRCGQAES*TERGSQ PHQVQHLPSHSRRGELSEVGRKEI*GDPNCTH*S IPQQHTDPGSLC***APCLCFLWHRGISECQEG HRHRSTDSRHSRSGES*TKGRDPHPSCGERPGA RTLVCHARTDHGRPGSDLNHRQHPNPTQRLPPQE GSEAVMGRRPALGPDLKPQLQWDLVKCSLSELS RICLLEILQAVRESFASLHSGLCLHLQLEMGVP QK*ALHLLQEGSYRGSRGLGPNSALRK*ISVPPV IILRFFAFRVT*FLIPLEKESVK*GEASDESKI *M*VAIYQTLLVSDISFLAPYPRFLELILVTFL INDL*FGPKLELFATYLWILMDFAIMGMFKVSPK HRIFYKWTVKLPTLKWQSSFTLHGLQQSQH*RE SALKAGRVELYKT*FLARHGGSHL*PWHFGRPR RVDHLSPVRDQPGQHGETPSLLKIQKLTRHGGVR L*SQLLWRLRHENRLNPGGGGCSELRSSYCTPA QVTARLSQKNK*I*IKI

Sequence MRPS11.shed1.aAug05

TCAAGTCATGCAGGCTGTGAGAAACGCGGGGTCGCGGTTCCTGCGGTCCTGGACTTGGCCCCAGACAGCCGGGTAACAAATGACTGCCCCCTCGAGCCCA CCGCCACCTCCAGGACTATGCTCCTACTCGTGTCCCTTGAGCCACCCGGGCCCCAGTGACCGTTAGGCCGTGGCCCTCACCGAGCTTTTCTTCCCAGCAG GGTCGTGGCCAGAACGCCGGCCGGGACCATCTGCACAGGCGCTCGACAGCTCCAAGACGCTGCGGCCAAGCAGAAAGTTGAACAGAACGCGGCTCCCAGC CACACCAAGTTCAGGTGAGCCCCACTTGGACCAGCCCTCTGGAGACCCGCAACCCCTGACTCTTGCCCGACACCCTCCAGAGTCAGAACCAGTGAATTTT CAGCTATGTCACTTGCTATCCGTGGGACCTTATGCAAATAAATCTGAGCCTCAGCCTTCTCATCTAAAAATGCGGATAATGCTGAGAGAGGTTGTGAGAA TCAGATGAGCCGTGGTACAGAGTAAATGTTCAGTGAACATTCGTTAAATCAATGAGTGAATGTGAGATATCCATAACATGTATCAGCGTTCTTTTCTTCT GAGATGGAGATCTTTTCAGACCAATAACCTTCCCTGCCTCCAAAACAAAATGGGGAGGTAGAGGGCGCTAGCGATGGAACAGATGTTCCTGCACGTCTTA CGGATGGTCCAGGGTGGGTTTTGTGCTCAGCCCTAGGAACTGGCATCTTGCTTCCCACCAGTGCCACCACCTCTGTATGCTGTATACACATCCACTTAAC TTCACATCCATTTAACAAACATTTACCAAGAATCTACTATGAGTGAGACACCATGCTAGGTGCCGTGAATACAGATACAAAAGATCATTCCTCCCCACAA GTAGTTCACAGTCTTTGAGGGAAGACAAACATGCAAACATTTTAACCATAATCTGCTCAATAATATAATGGAGGTAAGCATTGGTTGGAAGTATGAAATC ATAAGTGTCTAACTCCTGGCCGGGTGCAGTAGCTCATGCCTTTAATCCCAGCACTTTAGGCGGCCAAGGTGGGCGAATTACTTGAGGTCAGGAGATCGAG ACCAGCCTGGCCAACATGGCGAAACCCCGTCTCCACTAAAAGCACAAAAACTAGCCAGGCGTGATGTCTGGCACCTGTAATCCCAGCCACTCAGGAGGCT GAAGTAGAAGAATCGCATGAACCCAGGGAGCGGAGGTTGCAGTGAGCCAAGATCACGCCACTGTACTCCAGCCTGGGTGACAGATTGAGACTCTGTCTCA AAGAAAAAAAAAAAAAAAAAGAATAAGTGTCTCATTCCTGAGGAAATCAGGCAAGACCATGGAGAAAAGAACATGGAGCTCAGAAGTGAATGGGAGTTCA TCTGGACAAGTTGAAGTGGGTCATTGGAGACAAAGGTAACCATCTGTGTAAAGGCATGTGGTATGAAAAAACATGGTGT

MRPS11.u.f.6 (forward primer)
MRPS11.u.r.5 (reverse primer)
Intron retention

Frame 0

SSHAGCEKRGVAVPAVLDLAPDSRVTNDCPLEP TATSRTMLLLVSLEPPGPQ*PLGRGPHRAFLPSR VVARTPAGTICTGARQLQDAAAKQKVEQNAAPS HTKFR*APLGPALWRPATPDSCPTPSRVRTSEF SAMSLAIRGTLCK*I*ASAFSSKNADNAERGCEN QMSRGTE*MFSEHSLNQ*VNVRYP*HVSAFFSS EMEIFSDQ*PSLPPKQNGEVEGASDGTDVPARL TDGPGWVLCSALGTGILLPTSATTSVCCIHIHLT SHPFNKHLPRIYYE*DTMLGAVNTDTKDHSSPQ VVHSL*GKTNMQTF*P*SAQ*YNGGKHWLEV*N HKCLTPGRVQ*LMPLIPAL*AAKVGELLEVRRSR PAWPTWRNPVSTKSTKTSQA*CLAPVIPATQEA EVEESHEPRERRLQ*AKITPLYSSLGDRLRLCL KEKKKKKE*VSHS*GNQARPWRKEHGAQK*MGVH LDKLKWVIGDKGNHLCKGMWYEKTWC

Frame 1

QVMQAVRNAGSRFLRSWTWPQTAG*QMTAPSSP PPPPGLCSYSCPLSHPGPSDR*AVALTELFFPA GSWPERRPGPSAQALDSSKTLRPSRKLNRTRLPA TPSSGEPHLDQPSGDPQPLTLARHPPESEPVNF QLCHLLSVGPYANKSEPQPSHLKMRIMLREVVR IR*AVVQSKCSVNIR*INE*M*DIHNMYQRSFLL RWRSFQTNNLPCLQNKMGR*RALAMEQMFLHVL RMVQGGFCAQP*ELASCFPPVPPPLYAVYTST* LHIHLTNIYQESTMSETPC*VP*IQIQKIIPPHK *FTVFEGRQTCKHFNHNLLNNIMEVSIGWKYEI ISV*LLAGCSSSCL*SQHFRRPRWANYLRSGDR DQPGQHGETPSPLKAQKLARRDVWHL*SQPLRRL K*KNRMNPGSGGCSEPRSRHCTPAWVTD*DSVS KKKKKKKNKCLIPEEIRQDHGEKNMELRSEWEF IWTS*SGSLETKVTICVKACGMKKHG

Frame 2

KSCRL*ETRGRGSCGPGLGPRQPGNK*LPPRAH RHLQDYAPTRVP*ATRAPVTVRPWPSPSFSSQQ GRGQNAGRDHLHRRSTAPRRCGQAES*TERGSQ PHQVQVSPTWTSPLETRNP*LLPDTLQSQNQ*IF SYVTCYPWDLMQINLSLSLLI*KCG*C*ERL*E SDEPWYRVNVQ*TFVKSMSECEISITCISVLFF *DGDLFRPITFPASKTKWGGRGR*RWNRCSCTSY GWSRVGFVLSPRNWHLASHQCHHLCMLYTHPLN FTSI*QTFTKNLL*VRHHARCREYRYKRSFLPT SSSQSLREDKHANILTIICSII*WR*ALVGSMKS *VSNSWPGAVAHAFNPSTLGGQGGRIT*GQEIE TSLANMAKPRLH*KHKN*PGVMSGTCNPSHSGG *SRRIA*TQGAEVAVSQDHATVLQPG*QIETLSQ RKKKKKRISVSFLRKSGKTMEKRTWSSEVNGSS SGQVEVGHWRQR*PSV*RHVV*KNMV