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Sequences

Sequence MRPS11.bAug05

AGTCCCGGAACTGCTAGAACGAACCATTCGCATATGGAGGGGGTGACCCACCATCTCAGAACATTAAAAAAGGGAAAGAATCCCCTGGTGAACTACAGTG AAAGTCTTATTGAGCATTTAAATGGAAATAAAAATATTCAGTGGACCTAATGAAGAGTAGATGACTTTCCCTTCTGTCCCCTCCCCGACAGGCACTCATG GTACCGGCGCCGGCGCAGCTGTGACTGTCGCTGCAGACGGAAACTGACTGGGGTCAATTCAAGTCATGCAGGCTGTGAGAAACGCGGGGTCGCGGTTCCT GCGGTCCTGGACTTGGCCCCAGACAGCCGGGGTCGTGGCCAGAACGCCGGCCGGGACCATCTGCACAGGCGCTCGACAGCTCCAAGACGCTGCGGCCAAG CAGAAAGTTGAACAGAACGCGGCTCCCAGCCACACCAAGTTCAGCATTTACCCTCCCATTCCAGGAGAGGAGAGCTCTCTGAGGTGGGCAGGAAAGAAAT TTGAGGAGATCCCAATTGCACACATTAAAGCATCCCACAACAACACACAGATCCAGGTAGTCTCTGCTAGTAATGAGCCCCTTGCCTTTGCTTCCTGTGG CACAGAGGGATTTCGGAATGCCAAGAAGGGCACAGGCATCGCAGCACAGACAGCAGGCATAGCCGCAGCGGCGAGAGCTAAACAAAAGGGCGTGATCCAC ATCCGAGTTGTGGTGAAAGGCCTGGGGCCAGGACGCTTGTCTGCCATGCACGGACTGATCATGGGCGGCCTGGAAGTGATCTCAATCACAGACAACACCC CAATCCCACACAACGGCTGCCGCCCCAGGAAGGCTCGGAAGCTGTGATGGGAAGGAGGCCTGCACTTGGACCTGACCTCAAGCCTCAGCTCCAGTGGGAC CTTGTAAAATGCTCCCTGTCAGAGCTCTCCAGAATATGCTTGTTGGAGATCCTTCAGGCAGTAAGGGAGAGTTTTGCCTCCTTACACAGTGGCCTTTGCT TGCACCTCCAGCTGGAGATGGGTGTGCCCCAGAAGTAAGCTTTGCATCTCTTACAAGAGGGGAGCTACAGGGGCAGCCGTGGCCTAGGCCCAAACTCTGC TCTGAGAAAATAAATATCTGTACCACCTGTCATAATTTTGAGATTTTTTGCTTTCAGAGTTACGTAATTCCTAATTCCTCTTGAAAAAGAGAGTGTGAAA TGAGGTGAGGCCTCAGATGAAAGTAAAATATAAATGTGAGTTGCTATTTACCAGACACTTCTGGTTTCAGATATTTCTTTTCTAGCCCCTTACCCAAGAT TTCTAGAGCTAATCCTAGTAACTTTTCTTATTAATGACTTATAATTTGGCCCCAAATTGGAGCTTTTTGCCACCTACCTCTGGATTCTGATGGATTTCGC CATTATGGGCATGTTTAAAGTTAGCCCTAAACACAGGATTTTCTACAAGTGGACAGTCAAACTCCCCACACTAAAGTGGCAGTCATCGTTTACACTCCAT GGGCTTCAGCAGTCCCAGCACTAACGAGAGAGTGCCCTAAAAGCGGGGAGGGTAGAGTTGTACAAAACATGATTCTTGGCCAGGCACGGTGGCTCACACC TGTAACCCTGGCACTTTGGGAGGCCAAGGCGGGTGGATCACTTGAGTCCAGTTAGAGACCAGCCTGGGCAACATGGTGAAACCCCCTCTCTACTAAAAAT ACAAAAATTAACCAGGCATGGTGGTGTGCGCCTGTAATCCCAGCTACTCTGGAGGCTGAGGCATGAAAATCGCTTGAACCCAGGAGGTGGAGGCTGCAGT GAGCTGAGATCATCCTACTGCACTCCAGCCCAGGTGACAGCGAGACTGTCTCAAAAAAATAAATAAATATAAATAAAAATTT

MRPS11.u.f.6 (forward primer)
MRPS11.u.r.5 (reverse primer)
Intron retention

Frame 0

SPGTARTNHSHMEGVTHHLRTLKKGKNPLVNYS ESLIEHLNGNKNIQWT**RVDDFPFCPLPDRHSW YRRRRSCDCRCRRKLTGVNSSHAGCEKRGVAVP AVLDLAPDSRGRGQNAGRDHLHRRSTAPRRCGQ AES*TERGSQPHQVQHLPSHSRRGELSEVGRKEI *GDPNCTH*SIPQQHTDPGSLC***APCLCFLW HRGISECQEGHRHRSTDSRHSRSGES*TKGRDP HPSCGERPGARTLVCHARTDHGRPGSDLNHRQHP NPTQRLPPQEGSEAVMGRRPALGPDLKPQLQWD LVKCSLSELSRICLLEILQAVRESFASLHSGLC LHLQLEMGVPQK*ALHLLQEGSYRGSRGLGPNSA LRK*ISVPPVIILRFFAFRVT*FLIPLEKESVK *GEASDESKI*M*VAIYQTLLVSDISFLAPYPR FLELILVTFLINDL*FGPKLELFATYLWILMDFA IMGMFKVSPKHRIFYKWTVKLPTLKWQSSFTLH GLQQSQH*RESALKAGRVELYKT*FLARHGGSH L*PWHFGRPRRVDHLSPVRDQPGQHGETPSLLKI QKLTRHGGVRL*SQLLWRLRHENRLNPGGGGCS ELRSSYCTPAQVTARLSQKNK*I*IKI

Frame 1

VPELLERTIRIWRG*PTISEH*KRERIPW*TTV KVLLSI*MEIKIFSGPNEE*MTFPSVPSPTGTH GTGAGAAVTVAADGN*LGSIQVMQAVRNAGSRFL RSWTWPQTAGVVARTPAGTICTGARQLQDAAAK QKVEQNAAPSHTKFSIYPPIPGEESSLRWAGKK FEEIPIAHIKASHNNTQIQVVSASNEPLAFASCG TEGFRNAKKGTGIAAQTAGIAAAARAKQKGVIH IRVVVKGLGPGRLSAMHGLIMGGLEVISITDNT PIPHNGCRPRKARKL*WEGGLHLDLTSSLSSSGT L*NAPCQSSPEYACWRSFRQ*GRVLPPYTVAFA CTSSWRWVCPRSKLCISYKRGATGAAVA*AQTL L*ENKYLYHLS*F*DFLLSELRNS*FLLKKRV*N EVRPQMKVKYKCELLFTRHFWFQIFLF*PLTQD F*S*S**LFLLMTYNLAPNWSFLPPTSGF*WIS PLWACLKLALNTGFSTSGQSNSPH*SGSHRLHSM GFSSPSTNERVP*KRGG*SCTKHDSWPGTVAHT CNPGTLGGQGGWIT*VQLETSLGNMVKPPLY*K YKN*PGMVVCACNPSYSGG*GMKIA*TQEVEAAV S*DHPTALQPR*QRDCLKKINKYK*KF

Frame 2

SRNC*NEPFAYGGGDPPSQNIKKGKESPGELQ* KSY*AFKWK*KYSVDLMKSR*LSLLSPPRQALM VPAPAQL*LSLQTETDWGQFKSCRL*ETRGRGS CGPGLGPRQPGSWPERRPGPSAQALDSSKTLRPS RKLNRTRLPATPSSAFTLPFQERRAL*GGQERN LRRSQLHTLKHPTTTHRSR*SLLVMSPLPLLPV AQRDFGMPRRAQASQHRQQA*PQRRELNKRA*ST SELW*KAWGQDACLPCTD*SWAAWK*SQSQTTP QSHTTAAAPGRLGSCDGKEACTWT*PQASAPVG PCKMLPVRALQNMLVGDPSGSKGEFCLLTQWPLL APPAGDGCAPEVSFASLTRGELQGQPWPRPKLC SEKINICTTCHNFEIFCFQSYVIPNSS*KRECE MR*GLR*K*NINVSCYLPDTSGFRYFFSSPLPKI SRANPSNFSY**LIIWPQIGAFCHLPLDSDGFR HYGHV*S*P*TQDFLQVDSQTPHTKVAVIVYTP WASAVPALTRECPKSGEGRVVQNMILGQARWLTP VTLALWEAKAGGSLESS*RPAWATW*NPLSTKN TKINQAWWCAPVIPATLEAEA*KSLEPRRWRLQ *AEIILLHSSPGDSETVSKK*ININKN

Sequence MRPS11.gAug05

AGTCCCGGAACTGCTAGAACGAACCATTCGCATATGGAGGGGGTGACCCACCATCTCAGAACATTAAAAAAGGGAAAGAATCCCCTGGTGAACTACAGTG AAAGTCTTATTGAGCATTTAAATGGAAATAAAAATATTCAGTGGACCTAATGAAGAGTAGATGACTTTCCCTTCTGTCCCCTCCCCGACAGGCACTCATG GTACCGGCGCCGGCGCAGCTGTGACTGTCGCTGCAGACGGAAACTGACTGGGGTCAATTCAAGTCATGCAGGCTGTGAGAAACGCGGGGTCGCGGTTCCT GCGGTCCTGGACTTGGCCCCAGACAGCCGGGGTCGTGGCCAGAACGCCGGCCGGGACCATCTGCACAGGCGCTCGACAGCTCCAAGACGCTGCGGCCAAG CAGAAAGTTGAACAGAACGCGGCTCCCAGCCACACCAAGTTCAGAGTCCAGATATTGTCTATGGTTGATGAAATAAGAAACAGAGGTTTGACTGTATTTT TTAAATTGTGGGAAGAGGAACCTACAAAGGATCTGAAAATAATGAACACGGGTATACCTGCAGGGACAAGGAAGATGGGGAGTATGCATGAAAATCCCTT CTCATAGCGGAAAGTCCCCAGATGTGTCTGAAGTCAGCAAGTCAAGAAACAGCATCATAAGCACAGCAGTCACACATGCGGTGGTGGCACCAGAAGGACT GAAAAGGAATGGTGGGGGCAGCCACTTAAGAAGCAGCAGGGGGCACAGAGCTGTTATTTTTTAACCATGTGTTGTATTTCTTTGATTTTTAAAAAGTCGA GACAATTTTAAATAAAATCTTTCTTCTAATTGCAGCATTTACCCTCCCATTCCAGGAGAGGAGAGCTCTCTGAGGTGGGCAGGAAAGAAATTTGAGGAGA TCCCAATTGCACACATTAAAGCATCCCACAACAACACACAGATCCAGGTAGTCTCTGCTAGTAATGAGCCCCTTGCCTTTGCTTCCTGTGGCACAGAGGG ATTTCGGAATGCCAAGAAGGGCACAGGCATCGCAGCACAGACAGCAGGCATAGCCGCAGCGGCGTCTGCCATGCACGGACTGATCATGGGCGGCCTGGAA GTGATCTCAATCACAGACAACACCCCAATCCCACACAACGGCTGCCGCCCCAGGAAGGCTCGGAAGCTGTGATGGGAAGGAGGCCTGCACTTGGACCTGA CCTCAAGCCTCAGCTCCAGTGGGACCTTGTAAAATGCTCCCTGTCAGAGCTCTCCAGAATATGCTTGTTGGAGATCCTTCAGGCAGTAAGGGAGAGTTTT GCCTCCTTACACAGTGGCCTTTGCTTGCACCTCCAGCTGGAGATGGGTGTGCCCCAGAAGTAAGCTTTGCATCTCTTACAAGAGGGGAGCTACAGGGGCA GCCGTGGCCTAGGCCCAAACTCTGCTCTGAGAAAATAAATATCTGTACCACCTGTCATAATTTTGAGATTTTTTGCTTTCAGAGTTACGTAATTCCTAAT TCCTCTTGAAAAAGAGAGTGTGAAATGAGGTGAGGCCTCAGATGAAAGTAAAATATAAATGTGAGTTGCTATTTACCAGACACTTCTGGTTTCAGATATT TCTTTTCTAGCCCCTTACCCAAGATTTCTAGAGCTAATCCTAGTAACTTTTCTTATTAATGACTTATAATTTGGCCCCAAATTGGAGCTTTTTGCCACCT ACCTCTGGATTCTGATGGATTTCGCCATTATGGGCATGTTTAAAGTTAGCCCTAAACACAGGATTTTCTACAAGTGGACAGTCAAACTCCCCACACTAAA GTGGCAGTCATCGTTTACACTCCATGGGCTTCAGCAGTCCCAGCACTAACGAGAGAGTGCCCTAAAAGCGGGGAGGGTAGAGTTGTACAAAACATGATTC TTGGCCAGGCACGGTGGCTCACACCTGTAACCCTGGCACTTTGGGAGGCCAAGGCGGGTGGATCACTTGAGTCCAGTTAGAGACCAGCCTGGGCAACATG GTGAAACCCCCTCTCTACTAAAAATACAAAAATTAACCAGGCATGGTGGTGTGCGCCTGTAATCCCAGCTACTCTGGAGGCTGAGGCATGAAAATCGCTT GAACCCAGGAGGTGGAGGCTGCAGTGAGCTGAGATCATCCTACTGCACTCCAGCCCAGGTGACAGCGAGACTGTCTCAAAAAAATAAATAAATATAAATA AAAATTT

MRPS11.u.f.6 (forward primer)
MRPS11.u.r.5 (reverse primer)
Intron retention

Frame 0

SPGTARTNHSHMEGVTHHLRTLKKGKNPLVNYS ESLIEHLNGNKNIQWT**RVDDFPFCPLPDRHSW YRRRRSCDCRCRRKLTGVNSSHAGCEKRGVAVP AVLDLAPDSRGRGQNAGRDHLHRRSTAPRRCGQ AES*TERGSQPHQVQSPDIVYG**NKKQRFDCIF *IVGRGTYKGSENNEHGYTCRDKEDGEYA*KSL LIAESPQMCLKSASQETAS*AQQSHMRWWHQKD *KGMVGAAT*EAAGGTELLFFNHVLYFFDF*KVE TILNKIFLLIAAFTLPFQERRAL*GGQERNLRR SQLHTLKHPTTTHRSR*SLLVMSPLPLLPVAQR DFGMPRRAQASQHRQQA*PQRRLPCTD*SWAAWK *SQSQTTPQSHTTAAAPGRLGSCDGKEACTWT* PQASAPVGPCKMLPVRALQNMLVGDPSGSKGEF CLLTQWPLLAPPAGDGCAPEVSFASLTRGELQGQ PWPRPKLCSEKINICTTCHNFEIFCFQSYVIPN SS*KRECEMR*GLR*K*NINVSCYLPDTSGFRY FFSSPLPKISRANPSNFSY**LIIWPQIGAFCHL PLDSDGFRHYGHV*S*P*TQDFLQVDSQTPHTK VAVIVYTPWASAVPALTRECPKSGEGRVVQNMI LGQARWLTPVTLALWEAKAGGSLESS*RPAWATW *NPLSTKNTKINQAWWCAPVIPATLEAEA*KSL EPRRWRLQ*AEIILLHSSPGDSETVSKK*ININ KN

Frame 1

VPELLERTIRIWRG*PTISEH*KRERIPW*TTV KVLLSI*MEIKIFSGPNEE*MTFPSVPSPTGTH GTGAGAAVTVAADGN*LGSIQVMQAVRNAGSRFL RSWTWPQTAGVVARTPAGTICTGARQLQDAAAK QKVEQNAAPSHTKFRVQILSMVDEIRNRGLTVF FKLWEEEPTKDLKIMNTGIPAGTRKMGSMHENPF S*RKVPRCV*SQQVKKQHHKHSSHTCGGGTRRT EKEWWGQPLKKQQGAQSCYFLTMCCISLIFKKS RQF*IKSFF*LQHLPSHSRRGELSEVGRKEI*GD PNCTH*SIPQQHTDPGSLC***APCLCFLWHRG ISECQEGHRHRSTDSRHSRSGVCHARTDHGRPG SDLNHRQHPNPTQRLPPQEGSEAVMGRRPALGPD LKPQLQWDLVKCSLSELSRICLLEILQAVRESF ASLHSGLCLHLQLEMGVPQK*ALHLLQEGSYRG SRGLGPNSALRK*ISVPPVIILRFFAFRVT*FLI PLEKESVK*GEASDESKI*M*VAIYQTLLVSDI SFLAPYPRFLELILVTFLINDL*FGPKLELFAT YLWILMDFAIMGMFKVSPKHRIFYKWTVKLPTLK WQSSFTLHGLQQSQH*RESALKAGRVELYKT*F LARHGGSHL*PWHFGRPRRVDHLSPVRDQPGQH GETPSLLKIQKLTRHGGVRL*SQLLWRLRHENRL NPGGGGCSELRSSYCTPAQVTARLSQKNK*I*I KI

Frame 2

SRNC*NEPFAYGGGDPPSQNIKKGKESPGELQ* KSY*AFKWK*KYSVDLMKSR*LSLLSPPRQALM VPAPAQL*LSLQTETDWGQFKSCRL*ETRGRGS CGPGLGPRQPGSWPERRPGPSAQALDSSKTLRPS RKLNRTRLPATPSSESRYCLWLMK*ETEV*LYF LNCGKRNLQRI*K**TRVYLQGQGRWGVCMKIP SHSGKSPDVSEVSKSRNSIISTAVTHAVVAPEGL KRNGGGSHLRSSRGHRAVIF*PCVVFL*FLKSR DNFK*NLSSNCSIYPPIPGEESSLRWAGKKFEE IPIAHIKASHNNTQIQVVSASNEPLAFASCGTEG FRNAKKGTGIAAQTAGIAAAASAMHGLIMGGLE VISITDNTPIPHNGCRPRKARKL*WEGGLHLDL TSSLSSSGTL*NAPCQSSPEYACWRSFRQ*GRVL PPYTVAFACTSSWRWVCPRSKLCISYKRGATGA AVA*AQTLL*ENKYLYHLS*F*DFLLSELRNS* FLLKKRV*NEVRPQMKVKYKCELLFTRHFWFQIF LF*PLTQDF*S*S**LFLLMTYNLAPNWSFLPP TSGF*WISPLWACLKLALNTGFSTSGQSNSPH* SGSHRLHSMGFSSPSTNERVP*KRGG*SCTKHDS WPGTVAHTCNPGTLGGQGGWIT*VQLETSLGNM VKPPLY*KYKN*PGMVVCACNPSYSGG*GMKIA *TQEVEAAVS*DHPTALQPR*QRDCLKKINKYK* KF

Sequence MRPS11.kAug05

AGTCCCGGAACTGCTAGAACGAACCATTCGCATATGGAGGGGGTGACCCACCATCTCAGAACATTAAAAAAGGGAAAGAATCCCCTGGTGAACTACAGTG AAAGTCTTATTGAGCATTTAAATGGAAATAAAAATATTCAGTGGACCTAATGAAGAGTAGATGACTTTCCCTTCTGTCCCCTCCCCGACAGGCACTCATG GTACCGGCGCCGGCGCAGCTGTGACTGTCGCTGCAGACGGAAACTGACTGGGGTCAATTCAAGTCATGCAGGCTGTGAGAAACGCGGGGTCGCGGTTCCT GCGGTCCTGGACTTGGCCCCAGACAGCCGGGGTCGTGGCCAGAACGCCGGCCGGGACCATCTGCACAGGCGCTCGACAGCTCCAAGACGCTGCGGCCAAG CAGAAAGTTGAACAGAACGCGGCTCCCAGCCACACCAAGTTCAGGTGAGCCCCACTTGGACCAGCCCTCTGGAGACCCGCAACCCCTGACTCTTGCCCGA CACCCTCCAGAGTCAGAACCAGTGAATTTTCAGCTATGTCACTTGCTATCCGTGGGACCTTATGCAAATAAATCTGAGCCTCAGCCTTCTCATCTAAAAA TGCGGATAATGCTGAGAGAGGTTGTGAGAATCAGATGAGCCGTGGTACAGAGTAAATGTTCAGTGAACATTCGTTAAATCAATGAGTGAATGTGAGATAT CCATAACATGTATCAGCGTTCTTTTCTTCTGAGATGGAGATCTTTTCAGACCAATAACCTTCCCTGCCTCCAAAACAAAATGGGGAGGTAGAGGGCGCTA GCGATGGAACAGATGTTCCTGCACGTCTTACGGATGGTCCAGGGTGGGTTTTGTGCTCAGCCCTAGGAACTGGCATCTTGCTTCCCACCAGTGCCACCAC CTCTGTATGCTGTATACACATCCACTTAACTTCACATCCATTTAACAAACATTTACCAAGAATCTACTATGAGTGAGACACCATGCTAGGTGCCGTGAAT ACAGATACAAAAGATCATTCCTCCCCACAAGTAGTTCACAGTCTTTGAGGGAAGACAAACATGCAAACATTTTAACCATAATCTGCTCAATAATATAATG GAGGTAAGCATTGGTTGGAAGTATGAAATCATAAGTGTCTAACTCCTGGCCGGGTGCAGTAGCTCATGCCTTTAATCCCAGCACTTTAGGCGGCCAAGGT GGGCGAATTACTTGAGGTCAGGAGATCGAGACCAGCCTGGCCAACATGGCGAAACCCCGTCTCCACTAAAAGCACAAAAACTAGCCAGGCGTGATGTCTG GCACCTGTAATCCCAGCCACTCAGGAGGCTGAAGTAGAAGAATCGCATGAACCCAGGGAGCGGAGGTTGCAGTGAGCCAAGATCACGCCACTGTACTCCA GCCTGGGTGACAGATTGAGACTCTGTCTCAAAGAAAAAAAAAAAAAAAAAGAATAAGTGTCTCATTCCTGAGGAAATCAGGCAAGACCATGGAGAAAAGA ACATGGAGCTCAGAAGTGAATGGGAGTTCATCTGGACAAGTTGAAGTGGGTCATTGGAGACAAAGGTAACCATCTGTGTAAAGGCATGTGGTATGAAAAA ACATGGTGT

MRPS11.u.f.6 (forward primer)
MRPS11.u.r.5 (reverse primer)
Intron retention

Frame 0

SPGTARTNHSHMEGVTHHLRTLKKGKNPLVNYS ESLIEHLNGNKNIQWT**RVDDFPFCPLPDRHSW YRRRRSCDCRCRRKLTGVNSSHAGCEKRGVAVP AVLDLAPDSRGRGQNAGRDHLHRRSTAPRRCGQ AES*TERGSQPHQVQVSPTWTSPLETRNP*LLPD TLQSQNQ*IFSYVTCYPWDLMQINLSLSLLI*K CG*C*ERL*ESDEPWYRVNVQ*TFVKSMSECEI SITCISVLFF*DGDLFRPITFPASKTKWGGRGR* RWNRCSCTSYGWSRVGFVLSPRNWHLASHQCHH LCMLYTHPLNFTSI*QTFTKNLL*VRHHARCRE YRYKRSFLPTSSSQSLREDKHANILTIICSII*W R*ALVGSMKS*VSNSWPGAVAHAFNPSTLGGQG GRIT*GQEIETSLANMAKPRLH*KHKN*PGVMS GTCNPSHSGG*SRRIA*TQGAEVAVSQDHATVLQ PG*QIETLSQRKKKKKRISVSFLRKSGKTMEKR TWSSEVNGSSSGQVEVGHWRQR*PSV*RHVV*K NMV

Frame 1

VPELLERTIRIWRG*PTISEH*KRERIPW*TTV KVLLSI*MEIKIFSGPNEE*MTFPSVPSPTGTH GTGAGAAVTVAADGN*LGSIQVMQAVRNAGSRFL RSWTWPQTAGVVARTPAGTICTGARQLQDAAAK QKVEQNAAPSHTKFR*APLGPALWRPATPDSCP TPSRVRTSEFSAMSLAIRGTLCK*I*ASAFSSKN ADNAERGCENQMSRGTE*MFSEHSLNQ*VNVRY P*HVSAFFSSEMEIFSDQ*PSLPPKQNGEVEGA SDGTDVPARLTDGPGWVLCSALGTGILLPTSATT SVCCIHIHLTSHPFNKHLPRIYYE*DTMLGAVN TDTKDHSSPQVVHSL*GKTNMQTF*P*SAQ*YN GGKHWLEV*NHKCLTPGRVQ*LMPLIPAL*AAKV GELLEVRRSRPAWPTWRNPVSTKSTKTSQA*CL APVIPATQEAEVEESHEPRERRLQ*AKITPLYS SLGDRLRLCLKEKKKKKE*VSHS*GNQARPWRKE HGAQK*MGVHLDKLKWVIGDKGNHLCKGMWYEK TWC

Frame 2

SRNC*NEPFAYGGGDPPSQNIKKGKESPGELQ* KSY*AFKWK*KYSVDLMKSR*LSLLSPPRQALM VPAPAQL*LSLQTETDWGQFKSCRL*ETRGRGS CGPGLGPRQPGSWPERRPGPSAQALDSSKTLRPS RKLNRTRLPATPSSGEPHLDQPSGDPQPLTLAR HPPESEPVNFQLCHLLSVGPYANKSEPQPSHLK MRIMLREVVRIR*AVVQSKCSVNIR*INE*M*DI HNMYQRSFLLRWRSFQTNNLPCLQNKMGR*RAL AMEQMFLHVLRMVQGGFCAQP*ELASCFPPVPP PLYAVYTST*LHIHLTNIYQESTMSETPC*VP*I QIQKIIPPHK*FTVFEGRQTCKHFNHNLLNNIM EVSIGWKYEIISV*LLAGCSSSCL*SQHFRRPR WANYLRSGDRDQPGQHGETPSPLKAQKLARRDVW HL*SQPLRRLK*KNRMNPGSGGCSEPRSRHCTP AWVTD*DSVSKKKKKKKNKCLIPEEIRQDHGEK NMELRSEWEFIWTS*SGSLETKVTICVKACGMKK HG

Sequence MRPS11.dAug05

TCAAGTCATGCAGGCTGTGAGAAACGCGGGGTCGCGGTTCCTGCGGTCCTGGACTTGGCCCCAGACAGCCGGGTAACAAATGACTGCCCCCTCGAGCCCA CCGCCACCTCCAGGACTATGCTCCTACTCGTGTCCCTTGAGCCACCCGGGCCCCAGTGACCGTTAGGCCGTGGCCCTCACCGAGCTTTTCTTCCCAGCAG GGTCGTGGCCAGAACGCCGGCCGGGACCATCTGCACAGGCGCTCGACAGCTCCAAGACGCTGCGGCCAAGCAGAAAGTTGAACAGAACGCGGCTCCCAGC CACACCAAGTTCAGCATTTACCCTCCCATTCCAGGAGAGGAGAGCTCTCTGAGGTGGGCAGGAAAGAAATTTGAGGAGATCCCAATTGCACACATTAAAG CATCCCACAACAACACACAGATCCAGGTAGTCTCTGCTAGTAATGAGCCCCTTGCCTTTGCTTCCTGTGGCACAGAGGGATTTCGGAATGCCAAGAAGGG CACAGGCATCGCAGCACAGACAGCAGGCATAGCCGCAGCGGCGAGAGCTAAACAAAAGGGCGTGATCCACATCCGAGTTGTGGTGAAAGGCCTGGGGCCA GGACGCTTGTCTGCCATGCACGGACTGATCATGGGCGGCCTGGAAGTGATCTCAATCACAGACAACACCCCAATCCCACACAACGGCTGCCGCCCCAGGA AGGCTCGGAAGCTGTGATGGGAAGGAGGCCTGCACTTGGACCTGACCTCAAGCCTCAGCTCCAGTGGGACCTTGTAAAATGCTCCCTGTCAGAGCTCTCC AGAATATGCTTGTTGGAGATCCTTCAGGCAGTAAGGGAGAGTTTTGCCTCCTTACACAGTGGCCTTTGCTTGCACCTCCAGCTGGAGATGGGTGTGCCCC AGAAGTAAGCTTTGCATCTCTTACAAGAGGGGAGCTACAGGGGCAGCCGTGGCCTAGGCCCAAACTCTGCTCTGAGAAAATAAATATCTGTACCACCTGT CATAATTTTGAGATTTTTTGCTTTCAGAGTTACGTAATTCCTAATTCCTCTTGAAAAAGAGAGTGTGAAATGAGGTGAGGCCTCAGATGAAAGTAAAATA TAAATGTGAGTTGCTATTTACCAGACACTTCTGGTTTCAGATATTTCTTTTCTAGCCCCTTACCCAAGATTTCTAGAGCTAATCCTAGTAACTTTTCTTA TTAATGACTTATAATTTGGCCCCAAATTGGAGCTTTTTGCCACCTACCTCTGGATTCTGATGGATTTCGCCATTATGGGCATGTTTAAAGTTAGCCCTAA ACACAGGATTTTCTACAAGTGGACAGTCAAACTCCCCACACTAAAGTGGCAGTCATCGTTTACACTCCATGGGCTTCAGCAGTCCCAGCACTAACGAGAG AGTGCCCTAAAAGCGGGGAGGGTAGAGTTGTACAAAACATGATTCTTGGCCAGGCACGGTGGCTCACACCTGTAACCCTGGCACTTTGGGAGGCCAAGGC GGGTGGATCACTTGAGTCCAGTTAGAGACCAGCCTGGGCAACATGGTGAAACCCCCTCTCTACTAAAAATACAAAAATTAACCAGGCATGGTGGTGTGCG CCTGTAATCCCAGCTACTCTGGAGGCTGAGGCATGAAAATCGCTTGAACCCAGGAGGTGGAGGCTGCAGTGAGCTGAGATCATCCTACTGCACTCCAGCC CAGGTGACAGCGAGACTGTCTCAAAAAAATAAATAAATATAAATAAAAATTT

MRPS11.u.f.6 (forward primer)
MRPS11.u.r.5 (reverse primer)
Intron retention

Frame 0

SSHAGCEKRGVAVPAVLDLAPDSRVTNDCPLEP TATSRTMLLLVSLEPPGPQ*PLGRGPHRAFLPSR VVARTPAGTICTGARQLQDAAAKQKVEQNAAPS HTKFSIYPPIPGEESSLRWAGKKFEEIPIAHIK ASHNNTQIQVVSASNEPLAFASCGTEGFRNAKKG TGIAAQTAGIAAAARAKQKGVIHIRVVVKGLGP GRLSAMHGLIMGGLEVISITDNTPIPHNGCRPR KARKL*WEGGLHLDLTSSLSSSGTL*NAPCQSSP EYACWRSFRQ*GRVLPPYTVAFACTSSWRWVCP RSKLCISYKRGATGAAVA*AQTLL*ENKYLYHL S*F*DFLLSELRNS*FLLKKRV*NEVRPQMKVKY KCELLFTRHFWFQIFLF*PLTQDF*S*S**LFL LMTYNLAPNWSFLPPTSGF*WISPLWACLKLAL NTGFSTSGQSNSPH*SGSHRLHSMGFSSPSTNER VP*KRGG*SCTKHDSWPGTVAHTCNPGTLGGQG GWIT*VQLETSLGNMVKPPLY*KYKN*PGMVVC ACNPSYSGG*GMKIA*TQEVEAAVS*DHPTALQP R*QRDCLKKINKYK*KF

Frame 1

QVMQAVRNAGSRFLRSWTWPQTAG*QMTAPSSP PPPPGLCSYSCPLSHPGPSDR*AVALTELFFPA GSWPERRPGPSAQALDSSKTLRPSRKLNRTRLPA TPSSAFTLPFQERRAL*GGQERNLRRSQLHTLK HPTTTHRSR*SLLVMSPLPLLPVAQRDFGMPRR AQASQHRQQA*PQRRELNKRA*STSELW*KAWGQ DACLPCTD*SWAAWK*SQSQTTPQSHTTAAAPG RLGSCDGKEACTWT*PQASAPVGPCKMLPVRAL QNMLVGDPSGSKGEFCLLTQWPLLAPPAGDGCAP EVSFASLTRGELQGQPWPRPKLCSEKINICTTC HNFEIFCFQSYVIPNSS*KRECEMR*GLR*K*N INVSCYLPDTSGFRYFFSSPLPKISRANPSNFSY **LIIWPQIGAFCHLPLDSDGFRHYGHV*S*P* TQDFLQVDSQTPHTKVAVIVYTPWASAVPALTR ECPKSGEGRVVQNMILGQARWLTPVTLALWEAKA GGSLESS*RPAWATW*NPLSTKNTKINQAWWCA PVIPATLEAEA*KSLEPRRWRLQ*AEIILLHSS PGDSETVSKK*ININKN

Frame 2

KSCRL*ETRGRGSCGPGLGPRQPGNK*LPPRAH RHLQDYAPTRVP*ATRAPVTVRPWPSPSFSSQQ GRGQNAGRDHLHRRSTAPRRCGQAES*TERGSQ PHQVQHLPSHSRRGELSEVGRKEI*GDPNCTH*S IPQQHTDPGSLC***APCLCFLWHRGISECQEG HRHRSTDSRHSRSGES*TKGRDPHPSCGERPGA RTLVCHARTDHGRPGSDLNHRQHPNPTQRLPPQE GSEAVMGRRPALGPDLKPQLQWDLVKCSLSELS RICLLEILQAVRESFASLHSGLCLHLQLEMGVP QK*ALHLLQEGSYRGSRGLGPNSALRK*ISVPPV IILRFFAFRVT*FLIPLEKESVK*GEASDESKI *M*VAIYQTLLVSDISFLAPYPRFLELILVTFL INDL*FGPKLELFATYLWILMDFAIMGMFKVSPK HRIFYKWTVKLPTLKWQSSFTLHGLQQSQH*RE SALKAGRVELYKT*FLARHGGSHL*PWHFGRPR RVDHLSPVRDQPGQHGETPSLLKIQKLTRHGGVR L*SQLLWRLRHENRLNPGGGGCSELRSSYCTPA QVTARLSQKNK*I*IKI

Sequence MRPS11.shed1.aAug05

TCAAGTCATGCAGGCTGTGAGAAACGCGGGGTCGCGGTTCCTGCGGTCCTGGACTTGGCCCCAGACAGCCGGGTAACAAATGACTGCCCCCTCGAGCCCA CCGCCACCTCCAGGACTATGCTCCTACTCGTGTCCCTTGAGCCACCCGGGCCCCAGTGACCGTTAGGCCGTGGCCCTCACCGAGCTTTTCTTCCCAGCAG GGTCGTGGCCAGAACGCCGGCCGGGACCATCTGCACAGGCGCTCGACAGCTCCAAGACGCTGCGGCCAAGCAGAAAGTTGAACAGAACGCGGCTCCCAGC CACACCAAGTTCAGGTGAGCCCCACTTGGACCAGCCCTCTGGAGACCCGCAACCCCTGACTCTTGCCCGACACCCTCCAGAGTCAGAACCAGTGAATTTT CAGCTATGTCACTTGCTATCCGTGGGACCTTATGCAAATAAATCTGAGCCTCAGCCTTCTCATCTAAAAATGCGGATAATGCTGAGAGAGGTTGTGAGAA TCAGATGAGCCGTGGTACAGAGTAAATGTTCAGTGAACATTCGTTAAATCAATGAGTGAATGTGAGATATCCATAACATGTATCAGCGTTCTTTTCTTCT GAGATGGAGATCTTTTCAGACCAATAACCTTCCCTGCCTCCAAAACAAAATGGGGAGGTAGAGGGCGCTAGCGATGGAACAGATGTTCCTGCACGTCTTA CGGATGGTCCAGGGTGGGTTTTGTGCTCAGCCCTAGGAACTGGCATCTTGCTTCCCACCAGTGCCACCACCTCTGTATGCTGTATACACATCCACTTAAC TTCACATCCATTTAACAAACATTTACCAAGAATCTACTATGAGTGAGACACCATGCTAGGTGCCGTGAATACAGATACAAAAGATCATTCCTCCCCACAA GTAGTTCACAGTCTTTGAGGGAAGACAAACATGCAAACATTTTAACCATAATCTGCTCAATAATATAATGGAGGTAAGCATTGGTTGGAAGTATGAAATC ATAAGTGTCTAACTCCTGGCCGGGTGCAGTAGCTCATGCCTTTAATCCCAGCACTTTAGGCGGCCAAGGTGGGCGAATTACTTGAGGTCAGGAGATCGAG ACCAGCCTGGCCAACATGGCGAAACCCCGTCTCCACTAAAAGCACAAAAACTAGCCAGGCGTGATGTCTGGCACCTGTAATCCCAGCCACTCAGGAGGCT GAAGTAGAAGAATCGCATGAACCCAGGGAGCGGAGGTTGCAGTGAGCCAAGATCACGCCACTGTACTCCAGCCTGGGTGACAGATTGAGACTCTGTCTCA AAGAAAAAAAAAAAAAAAAAGAATAAGTGTCTCATTCCTGAGGAAATCAGGCAAGACCATGGAGAAAAGAACATGGAGCTCAGAAGTGAATGGGAGTTCA TCTGGACAAGTTGAAGTGGGTCATTGGAGACAAAGGTAACCATCTGTGTAAAGGCATGTGGTATGAAAAAACATGGTGT

MRPS11.u.f.6 (forward primer)
MRPS11.u.r.5 (reverse primer)
Intron retention

Frame 0

SSHAGCEKRGVAVPAVLDLAPDSRVTNDCPLEP TATSRTMLLLVSLEPPGPQ*PLGRGPHRAFLPSR VVARTPAGTICTGARQLQDAAAKQKVEQNAAPS HTKFR*APLGPALWRPATPDSCPTPSRVRTSEF SAMSLAIRGTLCK*I*ASAFSSKNADNAERGCEN QMSRGTE*MFSEHSLNQ*VNVRYP*HVSAFFSS EMEIFSDQ*PSLPPKQNGEVEGASDGTDVPARL TDGPGWVLCSALGTGILLPTSATTSVCCIHIHLT SHPFNKHLPRIYYE*DTMLGAVNTDTKDHSSPQ VVHSL*GKTNMQTF*P*SAQ*YNGGKHWLEV*N HKCLTPGRVQ*LMPLIPAL*AAKVGELLEVRRSR PAWPTWRNPVSTKSTKTSQA*CLAPVIPATQEA EVEESHEPRERRLQ*AKITPLYSSLGDRLRLCL KEKKKKKE*VSHS*GNQARPWRKEHGAQK*MGVH LDKLKWVIGDKGNHLCKGMWYEKTWC

Frame 1

QVMQAVRNAGSRFLRSWTWPQTAG*QMTAPSSP PPPPGLCSYSCPLSHPGPSDR*AVALTELFFPA GSWPERRPGPSAQALDSSKTLRPSRKLNRTRLPA TPSSGEPHLDQPSGDPQPLTLARHPPESEPVNF QLCHLLSVGPYANKSEPQPSHLKMRIMLREVVR IR*AVVQSKCSVNIR*INE*M*DIHNMYQRSFLL RWRSFQTNNLPCLQNKMGR*RALAMEQMFLHVL RMVQGGFCAQP*ELASCFPPVPPPLYAVYTST* LHIHLTNIYQESTMSETPC*VP*IQIQKIIPPHK *FTVFEGRQTCKHFNHNLLNNIMEVSIGWKYEI ISV*LLAGCSSSCL*SQHFRRPRWANYLRSGDR DQPGQHGETPSPLKAQKLARRDVWHL*SQPLRRL K*KNRMNPGSGGCSEPRSRHCTPAWVTD*DSVS KKKKKKKNKCLIPEEIRQDHGEKNMELRSEWEF IWTS*SGSLETKVTICVKACGMKKHG

Frame 2

KSCRL*ETRGRGSCGPGLGPRQPGNK*LPPRAH RHLQDYAPTRVP*ATRAPVTVRPWPSPSFSSQQ GRGQNAGRDHLHRRSTAPRRCGQAES*TERGSQ PHQVQVSPTWTSPLETRNP*LLPDTLQSQNQ*IF SYVTCYPWDLMQINLSLSLLI*KCG*C*ERL*E SDEPWYRVNVQ*TFVKSMSECEISITCISVLFF *DGDLFRPITFPASKTKWGGRGR*RWNRCSCTSY GWSRVGFVLSPRNWHLASHQCHHLCMLYTHPLN FTSI*QTFTKNLL*VRHHARCREYRYKRSFLPT SSSQSLREDKHANILTIICSII*WR*ALVGSMKS *VSNSWPGAVAHAFNPSTLGGQGGRIT*GQEIE TSLANMAKPRLH*KHKN*PGVMSGTCNPSHSGG *SRRIA*TQGAEVAVSQDHATVLQPG*QIETLSQ RKKKKKRISVSFLRKSGKTMEKRTWSSEVNGSS SGQVEVGHWRQR*PSV*RHVV*KNMV