Sequences - Rnomics 📊 Palace

        ☰
    
        Rnomics 📊 Palace
    
                       Back to Rnomics Platform
            
                       Open Session

1 warning:

Access restricted to public data.
Please sign in at Rnomics Platform to access your data.

Navigation

Home

Sequences

Sequence CAPN3.oAug05

CCCTCCTCCACGCTTACAGCCACACACACAGTCACACAGACGCGTTCTGAGGGTGGCTGCCCGCTTGGGATGGAGGAATCACTTCCCTCAGAACCCAGCC AAGTCCTCTAGGCCTCCTTGGGGGTCCTTCCAGCCTGAGGGGCTTCGGAGCTGAGGAGCAGCTGTTCTGATGCACGGGAACAAGCAGCACCTGCAGAAGG ACTTCTTCCTGTACAACGCCTCCAAGGCCAGGAGCAAAACCTACATCAACATGCGGGAGGTGTCCCAGCGCTTCCGCCTGCCTCCCAGCGAGTACGTCAT CGTGCCCTCCACCTACGAGCCCCACCAGGAGGGGGAATTCATCCTCCGGGTCTTCTCTGAAAAGAGGAACCTCTCTGAGGAAGTTGAAAATACCATCTCC GTGGATCGGCCAGTGCCACAGCCTGGCAGCTCTGATCAGGAAAGTGAGGAACAGCAACAATTCCGGAACATTTTCAAGCAGATAGCAGGAGATGACATGG AGATCTGTGCAGATGAGCTCAAGAAGGTCCTTAACACAGTCGTGAACAAACACAAGGACCTGAAGACACACGGGTTCACACTGGAGTCCTGCCGTAGCAT GATTGCGCTCATGGATACAGATGGCTCTGGAAAGCTCAACCTGCAGGAGTTCCACCACCTCTGGAACAAGATTAAGGCCTGGCAGAAAATTTTCAAACAC TATGACACAGACCAGTCCGGCACCATCAACAGCTACGAGATGCGAAATGCAGTCAACGACGCAGGATTCCACCTCAACAACCAGCTCTATGACATCATTA CCATGCGGTACGCAGACAAACACATGAACATCGACTTTGACAGTTTCATCTGCTGCTTCGTTAGGCTGGAGGGCATGTTCAGAGCTTTTCATGCATTTGA CAAGGATGGAGATGGTATCATCAAGCTCAACGTTCTGGAG

CAPN3.u.f.52 (forward primer)
CAPN3.u.r.55 (reverse primer)
Exon skipping and alternative donor or acceptor

Frame 0

PSSTLTATHTVTQTRSEGGCPLGMEESLPSEPS QVL*ASLGVLPA*GASELRSSCSDAREQAAPAEG LLPVQRLQGQEQNLHQHAGGVPALPPASQRVRH RALHLRAPPGGGIHPPGLL*KEEPL*GS*KYHL RGSASATAWQL*SGK*GTATIPEHFQADSRR*HG DLCR*AQEGP*HSREQTQGPEDTRVHTGVLP*H DCAHGYRWLWKAQPAGVPPPLEQD*GLAENFQT L*HRPVRHHQQLRDAKCSQRRRIPPQQPAL*HHY HAVRRQTHEHRL*QFHLLLR*AGGHVQSFSCI* QGWRWYHQAQRSG

Frame 1

PPPRLQPHTQSHRRVLRVAARLGWRNHFPQNPA KSSRPPWGSFQPEGLRS*GAAVLMHGNKQHLQK DFFLYNASKARSKTYINMREVSQRFRLPPSEYVI VPSTYEPHQEGEFILRVFSEKRNLSEEVENTIS VDRPVPQPGSSDQESEEQQQFRNIFKQIAGDDM EICADELKKVLNTVVNKHKDLKTHGFTLESCRSM IALMDTDGSGKLNLQEFHHLWNKIKAWQKIFKH YDTDQSGTINSYEMRNAVNDAGFHLNNQLYDII TMRYADKHMNIDFDSFICCFVRLEGMFRAFHAFD KDGDGIIKLNVLE

Frame 2

LLHAYSHTHSHTDAF*GWLPAWDGGITSLRTQP SPLGLLGGPSSLRGFGAEEQLF*CTGTSSTCRR TSSCTTPPRPGAKPTSTCGRCPSASACLPASTS SCPPPTSPTRRGNSSSGSSLKRGTSLRKLKIPSP WIGQCHSLAALIRKVRNSNNSGTFSSR*QEMTW RSVQMSSRRSLTQS*TNTRT*RHTGSHWSPAVA *LRSWIQMALESSTCRSSTTSGTRLRPGRKFSNT MTQTSPAPSTATRCEMQSTTQDSTSTTSSMTSL PCGTQTNT*TSTLTVSSAASLGWRACSELFMHL TRMEMVSSSSTFW

Sequence CAPN3.nAug05

CCCCATCTCTCAGATGCACGGGAACAAGCAGCACCTGCAGAAGGACTTCTTCCTGTACAACGCCTCCAAGGCCAGGAGCAAAACCTACATCAACATGCGG GAGGTGTCCCAGCGCTTCCGCCTGCCTCCCAGCGAGTACGTCATCGTGCCCTCCACCTACGAGCCCCACCAGGAGGGGGAATTCATCCTCCGGGTCTTCT CTGAAAAGAGGAACCTCTCTGAGGAAGTTGAAAATACCATCTCCGTGGATCGGCCAGTGCCACAGCCTGGCAGCTCTGATCAGGAAAGTGAGGAACAGCA ACAATTCCGGAACATTTTCAAGCAGATAGCAGGAGATGACATGGAGATCTGTGCAGATGAGCTCAAGAAGGTCCTTAACACAGTCGTGAACAAACACAAG GACCTGAAGACACACGGGTTCACACTGGAGTCCTGCCGTAGCATGATTGCGCTCATGGATACAGATGGCTCTGGAAAGCTCAACCTGCAGGAGTTCCACC ACCTCTGGAACAAGATTAAGGCCTGGCAGAAAATTTTCAAACACTATGACACAGACCAGTCCGGCACCATCAACAGCTACGAGATGCGAAATGCAGTCAA CGACGCAGGATTCCACCTCAACAACCAGCTCTATGACATCATTACCATGCGGTACGCAGACAAACACATGAACATCGACTTTGACAGTTTCATCTGCTGC TTCGTTAGGCTGGAGGGCATGTTCAGAGCTTTTCATGCATTTGACAAGGATGGAGATGGTATCATCAAGCTCAACGTTCTGGAG

CAPN3.u.f.52 (forward primer)
CAPN3.u.r.55 (reverse primer)
Exon skipping and alternative donor or acceptor

Frame 0

PHLSDAREQAAPAEGLLPVQRLQGQEQNLHQHA GGVPALPPASQRVRHRALHLRAPPGGGIHPPGLL *KEEPL*GS*KYHLRGSASATAWQL*SGK*GTA TIPEHFQADSRR*HGDLCR*AQEGP*HSREQTQ GPEDTRVHTGVLP*HDCAHGYRWLWKAQPAGVPP PLEQD*GLAENFQTL*HRPVRHHQQLRDAKCSQ RRRIPPQQPAL*HHYHAVRRQTHEHRL*QFHLL LR*AGGHVQSFSCI*QGWRWYHQAQRSG

Frame 1

PISQMHGNKQHLQKDFFLYNASKARSKTYINMR EVSQRFRLPPSEYVIVPSTYEPHQEGEFILRVF SEKRNLSEEVENTISVDRPVPQPGSSDQESEEQQ QFRNIFKQIAGDDMEICADELKKVLNTVVNKHK DLKTHGFTLESCRSMIALMDTDGSGKLNLQEFH HLWNKIKAWQKIFKHYDTDQSGTINSYEMRNAVN DAGFHLNNQLYDIITMRYADKHMNIDFDSFICC FVRLEGMFRAFHAFDKDGDGIIKLNVLE

Frame 2

PSLRCTGTSSTCRRTSSCTTPPRPGAKPTSTCG RCPSASACLPASTSSCPPPTSPTRRGNSSSGSS LKRGTSLRKLKIPSPWIGQCHSLAALIRKVRNS NNSGTFSSR*QEMTWRSVQMSSRRSLTQS*TNTR T*RHTGSHWSPAVA*LRSWIQMALESSTCRSST TSGTRLRPGRKFSNTMTQTSPAPSTATRCEMQS TTQDSTSTTSSMTSLPCGTQTNT*TSTLTVSSAA SLGWRACSELFMHLTRMEMVSSSSTFW

Sequence CAPN3.dAug05

CACTCTCTTTCTCTCTCCCTCTGGCATGCATGCTGCTGGTAGGAGACCCCCAAGTCAACATTGCTTCAGAAATCCTTTAGCACTCATTTCTCAGGAGAAC TTATGGCTTCAGAATCACAGCTCGGTTTTTAAGATGGACATAACCTGTACGACCTTCTGATGGGCTTTCAACTTTGAACTGGATGTGGACACTTTTCTCT CAGATGACAGAATTACTCCAACTTCCCCTTTGCAGTTGCTTCCTTTCCTTGAAGGTAGCTGTATCTTATTTTCTTTAAAAAGCTTTTTCTTCCAAAGCCA CTTGCCATGCCGACCGTCATTAGCGCATCTGTGGCTCCAAGGACAGCGGCTGAGCCCCGGTCCCCAGGGCCAGTTCCTCACCCGGCCCAGAGCAAGGCCA CTGAGGCTGGGGGTGGAAACCCAAGTGGCATCTATTCAGCCATCATCAGCCGCAATTTTCCTATTATCGGAGTGAAAGAGAAGACATTCGAGCAACTTCA CAAGAAATGTCTAGAAAAGAAAGTTCTTTATGTGGACCCTGAGTTCCCACCGGATGAGACCTCTCTCTTTTATAGCCAGAAGTTCCCCATCCAGTTCGTC TGGAAGAGACCTCCGGAAATTTGCGAGAATCCCCGATTTATCATTGATGGAGCCAACAGAACTGACATCTGTCAAGGAGAGCTAGGGGACTGCTGGTTTC TCGCAGCCATTGCCTGCCTGACCCTGAACCAGCACCTTCTTTTCCGAGTCATACCCCATGATCAAAGTTTCATCGAAAACTACGCAGGGATCTTCCACTT CCAGTTCTGGCGCTATGGAGAGTGGGTGGACGTGGTTATAGATGACTGCCTGCCAACGTACAACAATCAACTGGTTTTCACCAAGTCCAACCACCGCAAT GAGTTCTGGAGTGCTCTGCTGGAGAAGGCTTATGCTAAGCTCCATGGTTCCTACGAAGCTCTGAAAGGTGGGAACACCACAGAGGCCATGGAGGACTTCA CAGGAGGGGTGGCAGAGTTTTTTGAGATCAGGGATGCTCCTAGTGACATGTACAAGATCATGAAGAAAGCCATCGAGAGAGGCTCCCTCATGGGCTGCTC CATTGATACAATCATTCCGGTTCAGTATGAGACAAGAATGGCCTGCGGGCTGGTCAGAGGTCACGCCTACTCTGTCACGGGGCTGGATGAGGTCCCGTTC AAAGGTGAGAAAGTGAAGCTGGTGCGGCTGCGGAATCCGTGGGGCCAGGTGGAGTGGAACGGTTCTTGGAGTGATAGATGGAAGGACTGGAGCTTTGTGG ACAAAGATGAGAAGGCCCGTCTGCAGCACCAGGTCACTGAGGATGGAGAGTTCTGGATGTCCTATGAGGATTTCATCTACCATTTCACAAAGTTGGAGAT CTGCAACCTCACGGCCGATGCTCTGCAGTCTGACAAGCTTCAGACCTGGACAGTGTCTGTGAACGAGGGCCGCTGGGTACGGGGTTGCTCTGCCGGAGGC TGCCGCAACTTCCCAGATACTTTCTGGACCAACCCTCAGTACCGTCTGAAGCTCCTGGAGGAGGACGATGACCCTGATGACTCGGAGGTGATTTGCAGCT TCCTGGTGGCCCTGATGCAGAAGAACCGGCGGAAGGACCGGAAGCTAGGGGCCAGTCTCTTCACCATTGGCTTCGCCATCTACGAGGTTCCCAAAGAGAT GCACGGGAACAAGCAGCACCTGCAGAAGGACTTCTTCCTGTACAACGCCTCCAAGGCCAGGAGCAAAACCTACATCAACATGCGGGAGGTGTCCCAGCGC TTCCGCCTGCCTCCCAGCGAGTACGTCATCGTGCCCTCCACCTACGAGCCCCACCAGGAGGGGGAATTCATCCTCCGGGTCTTCTCTGAAAAGAGGAACC TCTCTGAGGAAGTTGAAAATACCATCTCCGTGGATCGGCCAGTGCCACAGCCTGGCAGCTCTGATCAGGAAAGTGAGGAACAGCAACAATTCCGGAACAT TTTCAAGCAGATAGCAGGAGATGACATGGAGATCTGTGCAGATGAGCTCAAGAAGGTCCTTAACACAGTCGTGAACAAACACAAGGACCTGAAGACACAC GGGTTCACACTGGAGTCCTGCCGTAGCATGATTGCGCTCATGGATACAGATGGCTCTGGAAAGCTCAACCTGCAGGAGTTCCACCACCTCTGGAACAAGA TTAAGGCCTGGCAGAAAATTTTCAAACACTATGACACAGACCAGTCCGGCACCATCAACAGCTACGAGATGCGAAATGCAGTCAACGACGCAGGATTCCA CCTCAACAACCAGCTCTATGACATCATTACCATGCGGTACGCAGACAAACACATGAACATCGACTTTGACAGTTTCATCTGCTGCTTCGTTAGGCTGGAG GGCATGTTCAGAGCTTTTCATGCATTTGACAAGGATGGAGATGGTATCATCAAGCTCAACGTTCTGGAGTGGCTGCAGCTCACCATGTATGCCTGAACCA GGCTGGCCTCATCCAAAGCCATGCAGGATCACTCAGGATTTCAGTTTCACCCTCTATTTCCAAAGCCATTTACCTCAAAGGACCCAGCAGCTACACCCCT ACAGGCTTCCAGGCACCTCATCAGTCATGCTCCTCCTCCATTTTACCCCCTACCCATCCTTGATCGGTCATGCCTAGCCTGACCCTTTAGTAAAGCAATG AGGTAGGAAGAACAAACCCTTGTCCCTTTGCCATGTGGAGGAAAGTGCCTGCCTCTGGTCCGAGCCGCCTCGGTTCTGAAGCGAGTGCTCCTGCTTACCT TGCTCTAGGCTGTCTGCAGAAGCACCTGCCGGTGGCACTCAGCACCTCCTTGTGCTAGAGCCCTCCATCACCTTCACGCTGTCCCACCATGGGCCAGGAA CCAAACCAGCACTGGGTTCTACTGCTGTGGGGTAAACTAACTCAGTGGAATAGGGCTGGTTACTTTGGGCTGTCCAACTCATAAGTTTGGCTGCATTTTG AAAAAAGCTGATCTAAATAAAGGCATGTGTATGGCTGGTC

CAPN3.u.f.52 (forward primer)
CAPN3.u.r.55 (reverse primer)
Exon skipping and alternative donor or acceptor

Frame 0

HSLSLSLWHACCW*ETPKSTLLQKSFSTHFSGE LMASESQLGF*DGHNLYDLLMGFQL*TGCGHFSL R*QNYSNFPFAVASFP*R*LYLIFFKKLFLPKP LAMPTVISASVAPRTAAEPRSPGPVPHPAQSKA TEAGGGNPSGIYSAIISRNFPIIGVKEKTFEQLH KKCLEKKVLYVDPEFPPDETSLFYSQKFPIQFV WKRPPEICENPRFIIDGANRTDICQGELGDCWF LAAIACLTLNQHLLFRVIPHDQSFIENYAGIFHF QFWRYGEWVDVVIDDCLPTYNNQLVFTKSNHRN EFWSALLEKAYAKLHGSYEALKGGNTTEAMEDF TGGVAEFFEIRDAPSDMYKIMKKAIERGSLMGCS IDTIIPVQYETRMACGLVRGHAYSVTGLDEVPF KGEKVKLVRLRNPWGQVEWNGSWSDRWKDWSFV DKDEKARLQHQVTEDGEFWMSYEDFIYHFTKLEI CNLTADALQSDKLQTWTVSVNEGRWVRGCSAGG CRNFPDTFWTNPQYRLKLLEEDDDPDDSEVICS FLVALMQKNRRKDRKLGASLFTIGFAIYEVPKEM HGNKQHLQKDFFLYNASKARSKTYINMREVSQR FRLPPSEYVIVPSTYEPHQEGEFILRVFSEKRN LSEEVENTISVDRPVPQPGSSDQESEEQQQFRNI FKQIAGDDMEICADELKKVLNTVVNKHKDLKTH GFTLESCRSMIALMDTDGSGKLNLQEFHHLWNK IKAWQKIFKHYDTDQSGTINSYEMRNAVNDAGFH LNNQLYDIITMRYADKHMNIDFDSFICCFVRLE GMFRAFHAFDKDGDGIIKLNVLEWLQLTMYA*T RLASSKAMQDHSGFQFHPLFPKPFTSKDPAATPL QASRHLISHAPPPFYPLPILDRSCLA*PFSKAM R*EEQTLVPLPCGGKCLPLVRAASVLKRVLLLT LL*AVCRSTCRWHSAPPCARALHHLHAVPPWARN QTSTGFYCCGVN*LSGIGLVTLGCPTHKFGCIL KKADLNKGMCMAG

Frame 1

TLFLSPSGMHAAGRRPPSQHCFRNPLALISQEN LWLQNHSSVFKMDITCTTF*WAFNFELDVDTFL SDDRITPTSPLQLLPFLEGSCILFSLKSFFFQSH LPCRPSLAHLWLQGQRLSPGPQGQFLTRPRARP LRLGVETQVASIQPSSAAIFLLSE*KRRHSSNF TRNV*KRKFFMWTLSSHRMRPLSFIARSSPSSSS GRDLRKFARIPDLSLMEPTELTSVKES*GTAGF SQPLPA*P*TSTFFSESYPMIKVSSKTTQGSST SSSGAMESGWTWL*MTACQRTTINWFSPSPTTAM SSGVLCWRRLMLSSMVPTKL*KVGTPQRPWRTS QEGWQSFLRSGMLLVTCTRS*RKPSREAPSWAA PLIQSFRFSMRQEWPAGWSEVTPTLSRGWMRSRS KVRK*SWCGCGIRGARWSGTVLGVIDGRTGALW TKMRRPVCSTRSLRMESSGCPMRISSTISQSWR SATSRPMLCSLTSFRPGQCL*TRAAGYGVALPEA AATSQILSGPTLSTV*SSWRRTMTLMTRR*FAA SWWP*CRRTGGRTGS*GPVSSPLASPSTRFPKR CTGTSSTCRRTSSCTTPPRPGAKPTSTCGRCPSA SACLPASTSSCPPPTSPTRRGNSSSGSSLKRGT SLRKLKIPSPWIGQCHSLAALIRKVRNSNNSGT FSSR*QEMTWRSVQMSSRRSLTQS*TNTRT*RHT GSHWSPAVA*LRSWIQMALESSTCRSSTTSGTR LRPGRKFSNTMTQTSPAPSTATRCEMQSTTQDS TSTTSSMTSLPCGTQTNT*TSTLTVSSAASLGWR ACSELFMHLTRMEMVSSSSTFWSGCSSPCMPEP GWPHPKPCRITQDFSFTLYFQSHLPQRTQQLHP YRLPGTSSVMLLLHFTPYPSLIGHA*PDPLVKQ* GRKNKPLSLCHVEESACLWSEPPRF*SECSCLP CSRLSAEAPAGGTQHLLVLEPSITFTLSHHGPG TKPALGSTAVG*TNSVE*GWLLWAVQLISLAAF* KKLI*IKACVWLV

Frame 2

LSFSLPLACMLLVGDPQVNIASEIL*HSFLRRT YGFRITARFLRWT*PVRPSDGLSTLNWMWTLFS QMTELLQLPLCSCFLSLKVAVSYFL*KAFSSKA TCHADRH*RICGSKDSG*APVPRASSSPGPEQGH *GWGWKPKWHLFSHHQPQFSYYRSEREDIRATS QEMSRKESSLCGP*VPTG*DLSLL*PEVPHPVR LEETSGNLRESPIYH*WSQQN*HLSRRARGLLVS RSHCLPDPEPAPSFPSHTP*SKFHRKLRRDLPL PVLALWRVGGRGYR*LPANVQQSTGFHQVQPPQ *VLECSAGEGLC*APWFLRSSERWEHHRGHGGLH RRGGRVF*DQGCS**HVQDHEESHRERLPHGLL H*YNHSGSV*DKNGLRAGQRSRLLCHGAG*GPV QR*ESEAGAAAESVGPGGVERFLE**MEGLELCG QR*EGPSAAPGH*GWRVLDVL*GFHLPFHKVGD LQPHGRCSAV*QASDLDSVCERGPLGTGLLCRR LPQLPRYFLDQPSVPSEAPGGGR*P**LGGDLQL PGGPDAEEPAEGPEARGQSLHHWLRHLRGSQRD AREQAAPAEGLLPVQRLQGQEQNLHQHAGGVPA LPPASQRVRHRALHLRAPPGGGIHPPGLL*KEEP L*GS*KYHLRGSASATAWQL*SGK*GTATIPEH FQADSRR*HGDLCR*AQEGP*HSREQTQGPEDT RVHTGVLP*HDCAHGYRWLWKAQPAGVPPPLEQD *GLAENFQTL*HRPVRHHQQLRDAKCSQRRRIP PQQPAL*HHYHAVRRQTHEHRL*QFHLLLR*AG GHVQSFSCI*QGWRWYHQAQRSGVAAAHHVCLNQ AGLIQSHAGSLRISVSPSISKAIYLKGPSSYTP TGFQAPHQSCSSSILPPTHP*SVMPSLTL**SN EVGRTNPCPFAMWRKVPASGPSRLGSEASAPAYL ALGCLQKHLPVALSTSLC*SPPSPSRCPTMGQE PNQHWVLLLWGKLTQWNRAGYFGLSNS*VWLHF EKS*SK*RHVYGW

Sequence CAPN3.qAug05

CCATTCTGTGATATTTATTGAGCACCTACTATGTTCCAGGCACTGTCCTAGGCACTAAGGATAGAGTAGTGAAGTAAACAGAAAGAAATCCCTGCCTTCA TGGAGCTTAATATTCTAACATGAGACAATAATGGATAGGAAAAACATATGTAGCATGTTAGATTTGGAGAGGTGATATGGAGCAAAAATAAAGTAGGGAA GAGGGATAGGAGGTGTTGGGGATGCTTGAAATTTTAGGTTAGCATGGCCAGGAAAGCCACATCCTGTCCCTGGCCACCACAGATGAGCTCATAGCCCCTG CCACTCTGATCTCTGTCCTTGGAAGATGCACCAGGTCCATGGGTAGGTGGCTGGGTCATGCCTTTGGGGGGCTCTGAGCAATACTAACAAGAACCTGCGT GCCTGGGCTTGGCTGTCGGGGATGGTGCTGACATGGGGCTGGTTCCTGGGGTTGGGGTGTTCCAGGGGTTCTCTAGAGGCTGGTTCTGGCTTGGCTGCCA GGAAGCCGTGCACCAGAGCAAACCGTCCACGGGCCTCCTGCTTGCTTCTGGTGACACTGAGACCCCACATGTCTGTATTCCTCACAGGGAAGTTGAAAAT ACCATCTCCGTGGATCGGCCAGTGGTGAGTGGTTTAGATCTTCTGTGCGAAAAGTCCAGAGGGTCCCCTTCCCTGACCATGCAGGGGACAGATGGTGCAG GGGAGAATGGGCACTGGCAGAGGGAATGGGAGTCTGGGCTGTGCTGAGCAGTCCCTCCTTGGCACTGCAAATCCTACTTTGGCATGGCCAGAAGTAATCG GCCTTAAGCACCGGGGGCCATTGAGGCAGTTCAGGGGCTGGGAAATATGGAAGAGGGTCCTGGAAAGGAGAAGCAATTTGAACAATCGGAGGGAACAAGG CCACAGGAAGGGATGACAAGAGCCGCAGCGAACACTGGATTCTGAGACTGGATAACATTGGATTTCACACATAGAGAAAAGAAAGTAAGCTGGTGCCGGA CCTGGTGTTGACACTTGGATCCTCCACTTACCAGCGGGGTGACCTGGACAATTTCTGTAATCCCTCTCACTCAGTTTCCTACTCAGTAAAACGGGGATGA TAATGTGCCTTGCAAGGCTTTTGTGAGGCTTCATCAATGAGGTGATGTATGTGAAGTGTCTGGCACAGCATGGGCACTCAAACAGAGGTGCTTTTTCACA CTTTACACCTTACAAGGTACTTTTCACATGTGTCATCGCGATACTTGCAAGGTTGCTGAGAGGTAGATGGGGTTATAATCCCTGGTGTTCAAGAAAGGAA GCAGAGGCTCAATGGGGTTGAATGACTTCTCTGAGTTCACAGAGCTCAGTAAGTGGCAGGGTTGGAACTCACATTCAGACTCTCTGACTCCAGACTTAGG TTTTTCCGCACCTCCACGCTGAGGCCAGCCCCAGGCAGTGAGAAGCCCAAAGTCCGAAGCACAGAGTGCTGTGTGTTGGGCTCTGTGTGTTGAGGAGTCT TGTGACTGCCTTGGGGCTTTGGGCTGTAGTCAGCTGACAGTCCTTTGTGCTCTGTGGGGATGACGTAGGCCAATGGGAGGACAAATGCCCCTCTGAACTG TCTTCTGGGCAGTGACAGTCATGGTCATAATCCTGACCCTGAGCCAGTGCCAGGTCTCCAAGTGCCTTCTGAATGACCACAGGCGATTGGTTTTAGTGGT AGGTGTGTGGGGATCTGTTCTGGTCATCTGGATGCTGGTCATCGGTGTGCAGTATTGATCAGGACCTGCAAACCCAAAAGCTTATGGGAGCTGGCACGTC ACAAAAAGAAAAAAACCAAGCCACAGCCTGGCAGCTCTGATCAGGAAAGTGAGGAACAGCAACAATTCCGGAACATTTTCAAGCAGATAGCAGGAGATGA CATGGAGATCTGTGCAGATGAGCTCAAGAAGGTCCTTAACACAGTCGTGAACAAACACAAGGACCTGAAGACACACGGGTTCACACTGGAGTCCTGCCGT AGCATGATTGCGCTCATGGATACAGATGGCTCTGGAAAGCTCAACCTGCAGGAGTTCCACCACCTCTGGAACAAGATTAAGGCCTGGCAGAAAATTTTCA AACACTATGACACAGACCAGTCCGGCACCATCAACAGCTACGAGATGCGAAATGCAGTCAACGACGCAGGATTCCACCTCAACAACCAGCTCTATGACAT CATTACCATGCGGTACGCAGACAAACACATGAACATCGACTTTGACAGTTTCATCTGCTGCTTCGTTAGGCTGGAGGGCATGTTCAGAGCTTTTCATGCA TTTGACAAGGATGGAGATGGTATCATCAAGCTCAACGTTCTGGAGTGGCTGCAGCTCACCATGTATGCCTGAACCAGGCTGGCCTCATCCAAAGCCATGC AGGATCACTCAGGATTTCAGTTTCACCCTCTATTTCCAAAGCCATTTACCTCAAAGGACCCAGCAGCTACACCCCTACAGGCTTCCAGGCACCTCATCAG TCATGCTCCTCCTCCATTTTACCCCCTACCCATCCTTGATCGGTCATGCCTAGCCTGACCCTTTAGTAAAGCAATGAGGTAGGAAGAACAAACCCTTGTC CCTTTGCCATGTGGAGGAAAGTGCCTGCCTCTGGTCCGAGCCGCCTCGGTTCTGAAGCGAGTGCTCCTGCTTACCTTGCTCTAGGCTGTCTGCAGAAGCA CCTGCCGGTGGCACTCAGCACCTCCTTGTGCTAGAGCCCTCCATCACCTTCACGCTGTCCCACCATGGGCCAGGAACCAAACCAGCACTGGGTTCTACTG CTGTGGGGTAAACTAACTCAGTGGAATAGGGCTGGTTACTTTGGGCTGTCCAACTCATAAGTTTGGCTGCATTTTGAAAAAAGCTGATCTAAATAAAGGC ATGTGTATGGCTGGTC

CAPN3.u.f.52 (forward primer)
CAPN3.u.r.55 (reverse primer)
Exon skipping and alternative donor or acceptor

Frame 0

PFCDIY*APTMFQALS*ALRIE**SKQKEIPAF MELNILT*DNNG*EKHM*HVRFGEVIWSKNKVGK RDRRCWGCLKF*VSMARKATSCPWPPQMSS*PL PL*SLSLEDAPGPWVGGWVMPLGGSEQY*QEPA CLGLAVGDGADMGLVPGVGVFQGFSRGWFWLGCQ EAVHQSKPSTGLLLASGDTETPHVCIPHREVEN TISVDRPVVSGLDLLCEKSRGSPSLTMQGTDGA GENGHWQREWESGLC*AVPPWHCKSYFGMARSNR P*APGAIEAVQGLGNMEEGPGKEKQFEQSEGTR PQEGMTRAAANTGF*DWITLDFTHREKKVSWCR TWC*HLDPPLTSGVTWTISVIPLTQFPTQ*NGDD NVPCKAFVRLHQ*GDVCEVSGTAWALKQRCFFT LYTLQGTFHMCHRDTCKVAER*MGL*SLVFKKG SRGSMGLNDFSEFTELSKWQGWNSHSDSLTPDLG FSAPPR*GQPQAVRSPKSEAQSAVCWALCVEES CDCLGALGCSQLTVLCALWG*RRPMGGQMPL*T VFWAVTVMVIILTLSQCQVSKCLLNDHRRLVLVV GVWGSVLVIWMLVIGVQY*SGPANPKAYGSWHV TKRKKPSHSLAALIRKVRNSNNSGTFSSR*QEM TWRSVQMSSRRSLTQS*TNTRT*RHTGSHWSPAV A*LRSWIQMALESSTCRSSTTSGTRLRPGRKFS NTMTQTSPAPSTATRCEMQSTTQDSTSTTSSMT SLPCGTQTNT*TSTLTVSSAASLGWRACSELFMH LTRMEMVSSSSTFWSGCSSPCMPEPGWPHPKPC RITQDFSFTLYFQSHLPQRTQQLHPYRLPGTSS VMLLLHFTPYPSLIGHA*PDPLVKQ*GRKNKPLS LCHVEESACLWSEPPRF*SECSCLPCSRLSAEA PAGGTQHLLVLEPSITFTLSHHGPGTKPALGST AVG*TNSVE*GWLLWAVQLISLAAF*KKLI*IKA CVWLV

Frame 1

HSVIFIEHLLCSRHCPRH*G*SSEVNRKKSLPS WSLIF*HETIMDRKNICSMLDLER*YGAKIK*G RGIGGVGDA*NFRLAWPGKPHPVPGHHR*AHSPC HSDLCPWKMHQVHG*VAGSCLWGALSNTNKNLR AWAWLSGMVLTWGWFLGLGCSRGSLEAGSGLAA RKPCTRANRPRASCLLLVTLRPHMSVFLTGKLKI PSPWIGQW*VV*IFCAKSPEGPLP*PCRGQMVQ GRMGTGRGNGSLGCAEQSLLGTANPTLAWPEVI GLKHRGPLRQFRGWEIWKRVLERRSNLNNRREQG HRKG*QEPQRTLDSETG*HWISHIEKRK*AGAG PGVDTWILHLPAG*PGQFL*SLSLSFLLSKTGM IMCLARLL*GFINEVMYVKCLAQHGHSNRGAFSH FTPYKVLFTCVIAILARLLRGRWGYNPWCSRKE AEAQWG*MTSLSSQSSVSGRVGTHIQTL*LQT* VFPHLHAEASPRQ*EAQSPKHRVLCVGLCVLRSL VTALGLWAVVS*QSFVLCGDDVGQWEDKCPSEL SSGQ*QSWS*S*P*ASARSPSAF*MTTGDWF*W *VCGDLFWSSGCWSSVCSIDQDLQTQKLMGAGTS QKEKNQATAWQL*SGK*GTATIPEHFQADSRR* HGDLCR*AQEGP*HSREQTQGPEDTRVHTGVLP *HDCAHGYRWLWKAQPAGVPPPLEQD*GLAENFQ TL*HRPVRHHQQLRDAKCSQRRRIPPQQPAL*H HYHAVRRQTHEHRL*QFHLLLR*AGGHVQSFSC I*QGWRWYHQAQRSGVAAAHHVCLNQAGLIQSHA GSLRISVSPSISKAIYLKGPSSYTPTGFQAPHQ SCSSSILPPTHP*SVMPSLTL**SNEVGRTNPC PFAMWRKVPASGPSRLGSEASAPAYLALGCLQKH LPVALSTSLC*SPPSPSRCPTMGQEPNQHWVLL LWGKLTQWNRAGYFGLSNS*VWLHFEKS*SK*R HVYGW

Frame 2

IL*YLLSTYYVPGTVLGTKDRVVK*TERNPCLH GA*YSNMRQ*WIGKTYVAC*IWRGDMEQK*SRE EG*EVLGMLEILG*HGQESHILSLATTDELIAP ATLISVLGRCTRSMGRWLGHAFGGL*AILTRTCV PGLGCRGWC*HGAGSWGWGVPGVL*RLVLAWLP GSRAPEQTVHGPPACFW*H*DPTCLYSSQGS*K YHLRGSASGEWFRSSVRKVQRVPFPDHAGDRWCR GEWALAEGMGVWAVLSSPSLALQILLWHGQK*S ALSTGGH*GSSGAGKYGRGSWKGEAI*TIGGNK ATGRDDKSRSEHWILRLDNIGFHT*RKESKLVPD LVLTLGSSTYQRGDLDNFCNPSHSVSYSVKRG* *CALQGFCEASSMR*CM*SVWHSMGTQTEVLFH TLHLTRYFSHVSSRYLQGC*EVDGVIIPGVQERK QRLNGVE*LL*VHRAQ*VAGLELTFRLSDSRLR FFRTSTLRPAPGSEKPKVRSTECCVLGSVC*GV L*LPWGFGL*SADSPLCSVGMT*ANGRTNAPLNC LLGSDSHGHNPDPEPVPGLQVPSE*PQAIGFSG RCVGICSGHLDAGHRCAVLIRTCKPKSLWELAR HKKKKTKPQPGSSDQESEEQQQFRNIFKQIAGDD MEICADELKKVLNTVVNKHKDLKTHGFTLESCR SMIALMDTDGSGKLNLQEFHHLWNKIKAWQKIF KHYDTDQSGTINSYEMRNAVNDAGFHLNNQLYDI ITMRYADKHMNIDFDSFICCFVRLEGMFRAFHA FDKDGDGIIKLNVLEWLQLTMYA*TRLASSKAM QDHSGFQFHPLFPKPFTSKDPAATPLQASRHLIS HAPPPFYPLPILDRSCLA*PFSKAMR*EEQTLV PLPCGGKCLPLVRAASVLKRVLLLTLL*AVCRS TCRWHSAPPCARALHHLHAVPPWARNQTSTGFYC CGVN*LSGIGLVTLGCPTHKFGCILKKADLNKG MCMAG