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Sequences

Sequence SIVA.hAug05

SIVA_HUMAN-3 (forward primer)
SIVA_HUMAN-4 (reverse primer)
Alternative acceptor

Frame 0

CDVTASLVRGWRPGSCVAPGPAAMPKRSCPFAD VAPLQLKVRVSQRELSRGVCAERYSQEVFDPSGV ASIACSSCVRAVDGKAVCGQCERALCGQCVRTC WGCGSVACTLCGLVDCSDMYEKVLCTSCAMFET *GWLKPAAFTGSHAVHGSLPWTSARCSH*TVGST GGVPFTCSILYPNDRMNKPLYICTRG

Frame 1

VTSRRRW*GAGGRGAA*LPAPRPCPSGAAPSRT WPRYSSRSA*ARGS*AAACAPSATRRRSSTHLG *RPLPVPHACEPWMGRRSAVSVSEPCAGSVCAPA GAAAPWPVPCVASWTAVTCTRKCCAPAVPCSRP EAGSSRLPSPGATPCMAAFPGRALGVHTELWGR REGCLLHVLFCILMTE*INLFIFAQED

Frame 2

*RHGVVGKGLAAGELRSSRPRGHAQAELPLRGR GPATAQGPREPEGVEPRRVRRALLAGGLRPIWG SVHCLFLMRASRGWEGGLRSV*ASPVRAVCAHL LGLRLRGLYPVWPRGLQ*HVRESAVHQLCHVRDL RLAQAGCLHREPRRAWQPSLDERSVFTLNCGVD GRGAFYMFYFVS**QNE*TSLYLHKR

Sequence SIVA.dAug05

TGTGACGTCACGGCGTCGTTGGTAAGGGGCTGGCGGCCGGGGAGCTGCGTAGCTCCCGGCCCCGCGGCCATGCCCAAGCGGAGCTGCCCCTTCGCGGACG TGGCCCCGCTACAGCTCAAGGTCCGCGTGAGCCAGAGGGAGTTGAGCCGCGGCGTGTGCGCCGAGCGCTACTCGCAGGAGGTCTTCGAGAAGACCAAGCG ACTCCTGTTCCTCGGGGCCCAGGCCTACCTGGACCACGTGTGGGATGAAGGCTGTGCCGTCGTTCACCTGCCAGAGTCCCCAAAGCCTGGCCCTACAGGG GCCCCGAGGGCTGCACGTGGGCAGATGCTGATTGGACCAGACGGCCGCCTGATCAGGAGCCTTGGGCAGGCCTCCGAAGCTGGTGAGTGGCACCAGCAGC CCTTTGTGGCTGTGGCACTGAGGGCAGGTGGTGGCACGAGCATTTTTCTTGATTTGCAAGGTCAGGCTTTTCCTCCCTGGGTAAGCAGGACTCTGACCCA GAGCTTGGCCTTCTGGCTCAGAAGGCTCCTGTTATCAGGAGGTCTCACATTCAAGACTGGAAGTTGTTAAACAGCTTCTAAGTACTGGGCCAAAAAAGCA GCAGAGACTCCCCGGGTATCCCGTCTGCTTTCCGCCTGCAGCCCCCTCAGATAGTCCCACAAGGCTGGAAACATGCCAGTCCCATCCCTATGCAGTGTGG GGTCTCAGAGCATCACCTGTGTTGCTGGTTAGAAATGCAATCCCCGACTCTACCTCAAGTCTGGTTGGTGTGTCTAGGAGGAGCCCAGGCACCTCTTTGT TAACCAGTAAGGCAGTGGGCCACACTGAGACCCAGATGGGACACATGGAGTTCTGACAAGCAACAGGGGAAGAATGGTCCTTCCAGCACTAGCCTCCAGG TAGCAGAGGGACCTGGTAAGGGAAAGAGCACTGAACTTGGAGTCAACTACAGGCATATCTCACCTTGGATCTCTGTAGTAAAACGGGGGTCCTGTGCACT GTACCAGGCTCACGGGTTGTCAGAAGGATCCAGTGTAGGTGGGGATGGGGTAGGCAGGTCAGAGCCCTCTGCCCTCAGGTATGCATGGAGGCAGGTAGCC CGGCAGTCCCGGAAACTCCAGTCTCCTTGCAGCCTGACGGCTTGGCGTTTCTTCCTCACAGACCCATCTGGGGTAGCGTCCATTGCCTGTTCCTCATGCG TGCGAGCCGTGGATGGGAAGGCGGTCTGCGGTCAGTGTGAGCGAGCCCTGTGCGGGCAGTGTGTGCGCACCTGCTGGGGCTGCGGCTCCGTGGCCTGTAC CCTGTGTGGCCTCGTGGAGTAAGTACTTCAGTCCCTGGAGCTGCTGAGATCCCATAGCCCCAGCAAGCCGTGATGGGGGACGGGTGGGTCACCCATGTGG GCCCAGAACACACACGTGTGGCCCCTGATGCAGTGCCATCTGGCATTGCCTAACGGGACATGGTGGCAATAGATGCTTGGCCCAACTTTAGTGGTTAGTA ATCCTCTCTAAGGGAAAGCTGAACCTCACAGATGACCTGCTCTGTATCCGGCTCTAGTCCCTGTCTTCAGCCACTTCCTGTTCTGATCTTTGAGCACCCC CACCTCCTCCTCCTCTGGTCTTTGAGCCCCCCCTCCCCCCGTCCGAGGAGCCCCTGGTTGGTGACACAGGTGCACACCGCAGCTTCACCACAGTCATGCG TGCCGTTTGGTTGTAGACCCTCTCAGGCAGGAAGTGGAGTGTTTGTGTAGTCTCCCATTTGTGGGTGGGTTTGCTGCAGCTGGCTGGATCCCGTCCTTAC TCCTAAGGTGGGGAGGGGCGTTCTCACCCTAGGGGCTACTCACCTGGTGGATGGGAGTGGACAGTGTGGAGCCTGTTTGCCCTGCCCCGTGAGAAAGATG ACTTCATCCAGACACATGTGGAACTGGCTCCATAGACCCAAAGCAAGCTTAGTCCAAACAATGTCTGAAATTGTCCATCTAAAATAGAAACCACATGTTA CATCTCGAGTCCTTTCTCTCGAGCCTTTCTTCAGTCGGGGCAGAGGCCCAGACTCATTGGAGACGGAGAGCCCTGGGCAGGGGGGGCAGCACCAGGGAGA AGCGCCGCGTGCCAGTGATCGGCTCCCATGGCTTCAGCATGGGCAGGAGTGGGGTAACGCACCCCATCCAGGTTGGGAATCATCTGCAGGGCTAGCTATG AATGTGGGATACTCTGTCTTTGCTTTTCACCCGCTGAGTTCATCTTCTTTCCTAGAAGTAAACTGAAAAGGGCAGGGTTTTCTCATTGTCTGGTGGCCCT CTCACCAAAGCAGAAGTGAACATAGCCATGGGCAGGTTCAGCGGAGAGGTGGGTCCCAGAGCGCTGCGTGGCTGGCCTCCCACTCCTGCCCTGCACACCA TCCTTGAGGGACTCCCTTGCGCCCATTTCCTCCTGGCCTCTACCTACTTTCTGCTGCTGCTTCCTCCCATACCCACAGAGTTCACGTTGAGCTGAGTGGG CCACTGTCCCCACTGTGGACACACTCTTTTATCGCAGCTACAGCACAGGAGGTGGGCTCTGCCCTCTTTCACAAATAAATGACTTGTTCCAGGTCACAAG CCAGAAGTGGCATTCCCAGGCCAGGCAGCCCAGCTGGTGGCACCCGCAGTCTCCTACCCCCTCCCCTGCCATTTCCTACTTCAGGACCAGGCGTCGCAGG AGTGGGGGAAAACAGGGATCTGTCCACACGGCTCTGGTTTAACACAGATGCAGCCCAGCAGCCTTTGGCGTCCTGCTGATGGCCTGCACTGGCCCACGCC TGGCCCGTCCTCTGCAGGGCTCTCCAGCTGGCTGCCGGTGGCGGTGAGGGGCTGTCTTCGCGGCTCACCCACAATACTACTGGCAAACTCTGCAAACCAA GTGGCAAGCAGTTCTGGCTGCCTTGTTGACTCCACGGCCCTGTCGTGTTTGGGGTAGCCATTGCCAGTCCCGTTTCCTCGCAACATCTCTCTTAATCACT TTCTCCCTGTGTTTTGCCGGGTTCCCTAGCCTTTACCTTTAGAGCTTTCTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCACCCAGGCTGGAGT GCAGTGGTGCGATCTTGGCTCACTGCAACTTCCACCTCCTGTGTTCAAGCAATTTTCCTGTCTCAGCCTCCCAAGTAGCTGGAGTTACAGGCGTGCGCTA GCACGCCCAGCTAATTTTTGTATTCTTAGTAGAGACAGAGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCTCCGGCCTCA GCCTCCCAAAGTGCTGAGGTAAGCCACACCATACGCGTGAGCCACCATGCCCGGCCCTACCCTTAGTCTTGATATATCAGAAAAGCACTGTTTGATGTGC TTCAGTGTAAACCATTGTGGTTCGGTGAATTCTGGCAGGTCATCTGGAGGTTTCTTTGGAGAGCTTCTATCCTACTGGAAACCCAGGTTGGGCCCCATGT GGATTGATCGGCAGTGGGAATCAGCTAGGGCTGCTGTAACTGAGTTCGCAGACCCAGTGGCATAGACAGCAAAGAGGTACTGCCACGTGGCTTTGGAGAC CAGAAGTCTGAGAGGAAGGTGCTGGCAGGGCTGGTTCCTTCTGAGGCTGCAATGGAAAACCTGTCCTGGCCTCTCTCCTGGCATCTGCTGGTTATCTTTG GTGTTCCCTGTAGACAGCTGCCCCCTCCCTGTATCTTCATGTCGTCTTCCTTCTCTGTGTCCTTCTCTTCACGTAGTCTTTTTAGGACGCTGGTCGTGTT GCCTTAGGGCCCCCATGTCAGTGCCGTCATCTAGACTGATGATGCCCGCAGTGATCCTGTCTCCAGATAAGGTCATGTCCTGAGGTGTTCTGGGTTAGGA CTTTGACGTTTGAATGGTGGGGGGTGGTGGACACAATTCAGCCCCTGACAGCAGCTTTTCTCTCCCCTCCCTGACGCTGTCGCAGCTGCAGTGACATGTA CGAGAAAGTGCTGTGCACCAGCTGTGCCATGTTCGAGACCTGAGGCTGGCTCAAGCCGGCTGCCTTCACCGGGAGCCACGCCGTGCATGGCAGCCTTCCC TGGACGAGCGCTCGGTGTTCACACTGAACTGTGGGGTCGACGGGAGGGGTGCCTTTTACATGTTCTATTTTGTATCCTAATGACAGAATGAATAAACCTC TTTATATTTGCACAA

SIVA_HUMAN-3 (forward primer)
SIVA_HUMAN-4 (reverse primer)
Alternative acceptor

Frame 0

CDVTASLVRGWRPGSCVAPGPAAMPKRSCPFAD VAPLQLKVRVSQRELSRGVCAERYSQEVFEKTKR LLFLGAQAYLDHVWDEGCAVVHLPESPKPGPTG APRAARGQMLIGPDGRLIRSLGQASEAGEWHQQ PFVAVALRAGGGTSIFLDLQGQAFPPWVSRTLTQ SLAFWLRRLLLSGGLTFKTGSC*TASKYWAKKA AETPRVSRLLSACSPLR*SHKAGNMPVPSLCSV GSQSITCVAG*KCNPRLYLKSGWCV*EEPRHLFV NQ*GSGPH*DPDGTHGVLTSNRGRMVLPALASR *QRDLVRERALNLESTTGISHLGSL**NGGPVH CTRLTGCQKDPV*VGMG*AGQSPLPSGMHGGR*P GSPGNSSLLAA*RLGVSSSQTHLG*RPLPVPHA CEPWMGRRSAVSVSEPCAGSVCAPAGAAAPWPV PCVASWSKYFSPWSC*DPIAPASRDGGRVGHPCG PRTHTCGP*CSAIWHCLTGHGGNRCLAQL*WLV ILSKGKLNLTDDLLCIRL*SLSSATSCSDL*AP PPPPPLVFEPPLPPSEEPLVGDTGAHRSFTTVMR AVWL*TLSGRKWSVCVVSHLWVGLLQLAGSRPY S*GGEGRSHPRGYSPGGWEWTVWSLFALPREKD DFIQTHVELAP*TQSKLSPNNV*NCPSKIETTCY ISSPFSRAFLQSGQRPRLIGDGEPWAGGAAPGR SAACQ*SAPMASAWAGVG*RTPSRLGIICRASY ECGILCLCFSPAEFIFFPRSKLKRAGFSHCLVAL SPKQK*T*PWAGSAERWVPERCVAGLPLLPCTP SLRDSLAPISSWPLPTFCCCFLPYPQSSR*AEW ATVPTVDTLFYRSYSTGGGLCPLSQINDLFQVTS QKWHSQARQPSWWHPQSPTPSPAISYFRTRRRR SGGKQGSVHTALV*HRCSPAAFGVLLMACTGPR LARPLQGSPAGCRWR*GAVFAAHPQYYWQTLQTK WQAVLAALLTPRPCRVWGSHCQSRFLATSLLIT FSLCFAGFPSLYL*SFLFFFFLRRSLALSPRLE CSGAILAHCNFHLLCSSNFPVSASQVAGVTGVR* HAQLIFVFLVETEFHHVGQAGLELLTSGDPPAS ASQSAEVSHTIRVSHHARPYP*S*YIRKALFDV LQCKPLWFGEFWQVIWRFLWRASILLETQVGPHV D*SAVGIS*GCCN*VRRPSGIDSKEVLPRGFGD QKSERKVLAGLVPSEAAMENLSWPLSWHLLVIF GVPCRQLPPPCIFMSSSFSVSFSSRSLFRTLVVL P*GPHVSAVI*TDDARSDPVSR*GHVLRCSGLG L*RLNGGGWWTQFSP*QQLFSPLPDAVAAAVTC TRKCCAPAVPCSRPEAGSSRLPSPGATPCMAAFP GRALGVHTELWGRREGCLLHVLFCILMTE*INL FIFAQ

Frame 1

VTSRRRW*GAGGRGAA*LPAPRPCPSGAAPSRT WPRYSSRSA*ARGS*AAACAPSATRRRSSRRPS DSCSSGPRPTWTTCGMKAVPSFTCQSPQSLALQG PRGLHVGRC*LDQTAA*SGALGRPPKLVSGTSS PLWLWH*GQVVARAFFLICKVRLFLPG*AGL*P RAWPSGSEGSCYQEVSHSRLEVVKQLLSTGPKKQ QRLPGYPVCFPPAAPSDSPTRLETCQSHPYAVW GLRASPVLLVRNAIPDSTSSLVGVSRRSPGTSL LTSKAVGHTETQMGHMEF*QATGEEWSFQH*PPG SRGTW*GKEH*TWSQLQAYLTLDLCSKTGVLCT VPGSRVVRRIQCRWGWGRQVRALCPQVCMEAGS PAVPETPVSLQPDGLAFLPHRPIWGSVHCLFLMR ASRGWEGGLRSV*ASPVRAVCAHLLGLRLRGLY PVWPRGVSTSVPGAAEIP*PQQAVMGDGWVTHV GPEHTRVAPDAVPSGIA*RDMVAIDAWPNFSG** SSLRES*TSQMTCSVSGSSPCLQPLPVLIFEHP HLLLLWSLSPPSPRPRSPWLVTQVHTAASPQSC VPFGCRPSQAGSGVFV*SPICGWVCCSWLDPVLT PKVGRGVLTLGATHLVDGSGQCGACLPCPVRKM TSSRHMWNWLHRPKASLVQTMSEIVHLK*KPHV TSRVLSLEPFFSRGRGPDSLETESPGQGGQHQGE APRASDRLPWLQHGQEWGNAPHPGWESSAGLAM NVGYSVFAFHPLSSSSFLEVN*KGQGFLIVWWP SHQSRSEHSHGQVQRRGGSQSAAWLASHSCPAHH P*GTPLRPFPPGLYLLSAAASSHTHRVHVELSG PLSPLWTHSFIAATAQEVGSALFHK*MTCSRSQ ARSGIPRPGSPAGGTRSLLPPPLPFPTSGPGVAG VGENRDLSTRLWFNTDAAQQPLASC*WPALAHA WPVLCRALQLAAGGGEGLSSRLTHNTTGKLCKP SGKQFWLPC*LHGPVVFGVAIASPVSSQHLS*SL SPCVLPGSLAFTFRAFFFFFF*DGVSLCHPGWS AVVRSWLTATSTSCVQAIFLSQPPK*LELQACA STPS*FLYS**RQSFTMLARLVSNS*PQVILRPQ PPKVLR*ATPYA*ATMPGPTLSLDISEKHCLMC FSVNHCGSVNSGRSSGGFFGELLSYWKPRLGPM WIDRQWESARAAVTEFADPVA*TAKRYCHVALET RSLRGRCWQGWFLLRLQWKTCPGLSPGICWLSL VFPVDSCPLPVSSCRLPSLCPSLHVVFLGRWSC CLRAPMSVPSSRLMMPAVILSPDKVMS*GVLG*D FDV*MVGGGGHNSAPDSSFSLPSLTLSQLQ*HV RESAVHQLCHVRDLRLAQAGCLHREPRRAWQPS LDERSVFTLNCGVDGRGAFYMFYFVS**QNE*TS LYLH

Frame 2

*RHGVVGKGLAAGELRSSRPRGHAQAELPLRGR GPATAQGPREPEGVEPRRVRRALLAGGLREDQA TPVPRGPGLPGPRVG*RLCRRSPARVPKAWPYR GPEGCTWADADWTRRPPDQEPWAGLRSW*VAPAA LCGCGTEGRWWHEHFS*FARSGFSSLGKQDSDP ELGLLAQKAPVIRRSHIQDWKLLNSF*VLGQKS SRDSPGIPSAFRLQPPQIVPQGWKHASPIPMQCG VSEHHLCCWLEMQSPTLPQVWLVCLGGAQAPLC *PVRQWATLRPRWDTWSSDKQQGKNGPSSTSLQ VAEGPGKGKSTELGVNYRHISPWISVVKRGSCAL YQAHGLSEGSSVGGDGVGRSEPSALRYAWRQVA RQSRKLQSPCSLTAWRFFLTDPSGVASIACSSC VRAVDGKAVCGQCERALCGQCVRTCWGCGSVACT LCGLVE*VLQSLELLRSHSPSKP*WGTGGSPMW AQNTHVWPLMQCHLALPNGTWWQ*MLGPTLVVS NPL*GKAEPHR*PALYPALVPVFSHFLF*SLSTP TSSSSGL*APPPPVRGAPGW*HRCTPQLHHSHA CRLVVDPLRQEVECLCSLPFVGGFAAAGWIPSL LLRWGGAFSP*GLLTWWMGVDSVEPVCPAP*ER* LHPDTCGTGSIDPKQA*SKQCLKLSI*NRNHML HLESFLSSLSSVGAEAQTHWRRRALGRGGSTRE KRRVPVIGSHGFSMGRSGVTHPIQVGNHLQG*L* MWDTLSLLFTR*VHLLS*K*TEKGRVFSLSGGP LTKAEVNIAMGRFSGEVGPRALRGWPPTPALHT ILEGLPCAHFLLASTYFLLLLPPIPTEFTLS*VG HCPHCGHTLLSQLQHRRWALPSFTNK*LVPGHK PEVAFPGQAAQLVAPAVSYPLPCHFLLQDQASQ EWGKTGICPHGSGLTQMQPSSLWRPADGLHWPTP GPSSAGLSSWLPVAVRGCLRGSPTILLANSANQ VASSSGCLVDSTALSCLG*PLPVPFPRNISLNH FLPVFCRVP*PLPLELSFFFFFETESRSVTQAGV QWCDLGSLQLPPPVFKQFSCLSLPSSWSYRRAL ARPANFCILSRDRVSPCWPGWSRTPDLR*SSGL SLPKC*GKPHHTREPPCPALPLVLIYQKSTV*CA SV*TIVVR*ILAGHLEVSLESFYPTGNPGWAPC GLIGSGNQLGLL*LSSQTQWHRQQRGTATWLWR PEV*EEGAGRAGSF*GCNGKPVLASLLASAGYLW CSL*TAAPSLYLHVVFLLCVLLFT*SF*DAGRV ALGPPCQCRHLD**CPQ*SCLQIRSCPEVFWVR TLTFEWWGVVDTIQPLTAAFLSPP*RCRSCSDMY EKVLCTSCAMFET*GWLKPAAFTGSHAVHGSLP WTSARCSH*TVGSTGGVPFTCSILYPNDRMNKP LYICT