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Sequences

Sequence SIVA.eAug05

TGTGACGTCACGGCGTCGTTGGTAAGGGGCTGGCGGCCGGGGAGCTGCGTAGCTCCCGGCCCCGCGGCCATGCCCAAGCGGAGCTGCCCCTTCGCGGACG
TGGCCCCGCTACAGCTCAAGGTCCGCGTGAGCCAGAGGGAGTTGAGCCGCGGCGTGTGCGCCGAGCGCTACTCGCAGGAGGTCTTCGAGAAGACCAAGCG
ACTCCTGTTCCTCGGGGCCCAGGCCTACCTGGACCACGTGTGGGATGAAGGCTGTGCCGTCGTTCACCTGCCAGAGTCCCCAAAGCCTGGCCCTACAGGG
GCCCCGAGGGCTGCACGTGGGCAGATGCTGATTGGACCAGACGGCCGCCTGATCAGGAGCCTTGGGCAGGCCTCCGAAGCTGACCCATCTGGGGTAGCGT
CCATTGCCTGTTCCTCATGCGTGCGAGCCGTGGATGGGAAGGCGGTCTGCGGTCAGTGTGAGCGAGCCCTGTGCGGGCAGTGTGTGCGCACCTGCTGGGG
CTGCGGCTCCGTGGCCTGTACCCTGTGTGGCCTCGTGGATGACATGTACGAGAAAGTGCTGTGCACCAGCTGTGCCATGTTCGAGACCTGAGGCTGGCTC
AAGCCGGCTGCCTTCACCGGGAGCCACGCCGTGCATGGCAGCCTTCCCTGGACGAGCGCTCGGTGTTCACACTGAACTGTGGGGTCGACGGGAGGGGTGC
CTTTTACATGTTCTATTTTGTATCCTAATGACAGAATGAATAAACCTCTTTATATTTGCACAAGAGGAC
  • SIVA_HUMAN-3 (forward primer)
  • SIVA_HUMAN-4 (reverse primer)
  • Alternative acceptor

Frame 0

CDVTASLVRGWRPGSCVAPGPAAMPKRSCPFAD
VAPLQLKVRVSQRELSRGVCAERYSQEVFEKTKR
LLFLGAQAYLDHVWDEGCAVVHLPESPKPGPTG
APRAARGQMLIGPDGRLIRSLGQASEADPSGVA
SIACSSCVRAVDGKAVCGQCERALCGQCVRTCWG
CGSVACTLCGLVDDMYEKVLCTSCAMFET*GWL
KPAAFTGSHAVHGSLPWTSARCSH*TVGSTGGV
PFTCSILYPNDRMNKPLYICTRG

Frame 1

VTSRRRW*GAGGRGAA*LPAPRPCPSGAAPSRT
WPRYSSRSA*ARGS*AAACAPSATRRRSSRRPS
DSCSSGPRPTWTTCGMKAVPSFTCQSPQSLALQG
PRGLHVGRC*LDQTAA*SGALGRPPKLTHLG*R
PLPVPHACEPWMGRRSAVSVSEPCAGSVCAPAG
AAAPWPVPCVASWMTCTRKCCAPAVPCSRPEAGS
SRLPSPGATPCMAAFPGRALGVHTELWGRREGC
LLHVLFCILMTE*INLFIFAQED

Frame 2

*RHGVVGKGLAAGELRSSRPRGHAQAELPLRGR
GPATAQGPREPEGVEPRRVRRALLAGGLREDQA
TPVPRGPGLPGPRVG*RLCRRSPARVPKAWPYR
GPEGCTWADADWTRRPPDQEPWAGLRS*PIWGSV
HCLFLMRASRGWEGGLRSV*ASPVRAVCAHLLG
LRLRGLYPVWPRG*HVRESAVHQLCHVRDLRLA
QAGCLHREPRRAWQPSLDERSVFTLNCGVDGRGA
FYMFYFVS**QNE*TSLYLHKR

Sequence SIVA.hAug05

TGTGACGTCACGGCGTCGTTGGTAAGGGGCTGGCGGCCGGGGAGCTGCGTAGCTCCCGGCCCCGCGGCCATGCCCAAGCGGAGCTGCCCCTTCGCGGACG
TGGCCCCGCTACAGCTCAAGGTCCGCGTGAGCCAGAGGGAGTTGAGCCGCGGCGTGTGCGCCGAGCGCTACTCGCAGGAGGTCTTCGACCCATCTGGGGT
AGCGTCCATTGCCTGTTCCTCATGCGTGCGAGCCGTGGATGGGAAGGCGGTCTGCGGTCAGTGTGAGCGAGCCCTGTGCGGGCAGTGTGTGCGCACCTGC
TGGGGCTGCGGCTCCGTGGCCTGTACCCTGTGTGGCCTCGTGGACTGCAGTGACATGTACGAGAAAGTGCTGTGCACCAGCTGTGCCATGTTCGAGACCT
GAGGCTGGCTCAAGCCGGCTGCCTTCACCGGGAGCCACGCCGTGCATGGCAGCCTTCCCTGGACGAGCGCTCGGTGTTCACACTGAACTGTGGGGTCGAC
GGGAGGGGTGCCTTTTACATGTTCTATTTTGTATCCTAATGACAGAATGAATAAACCTCTTTATATTTGCACAAGAGGAC
  • SIVA_HUMAN-3 (forward primer)
  • SIVA_HUMAN-4 (reverse primer)
  • Alternative acceptor

Frame 0

CDVTASLVRGWRPGSCVAPGPAAMPKRSCPFAD
VAPLQLKVRVSQRELSRGVCAERYSQEVFDPSGV
ASIACSSCVRAVDGKAVCGQCERALCGQCVRTC
WGCGSVACTLCGLVDCSDMYEKVLCTSCAMFET
*GWLKPAAFTGSHAVHGSLPWTSARCSH*TVGST
GGVPFTCSILYPNDRMNKPLYICTRG

Frame 1

VTSRRRW*GAGGRGAA*LPAPRPCPSGAAPSRT
WPRYSSRSA*ARGS*AAACAPSATRRRSSTHLG
*RPLPVPHACEPWMGRRSAVSVSEPCAGSVCAPA
GAAAPWPVPCVASWTAVTCTRKCCAPAVPCSRP
EAGSSRLPSPGATPCMAAFPGRALGVHTELWGR
REGCLLHVLFCILMTE*INLFIFAQED

Frame 2

*RHGVVGKGLAAGELRSSRPRGHAQAELPLRGR
GPATAQGPREPEGVEPRRVRRALLAGGLRPIWG
SVHCLFLMRASRGWEGGLRSV*ASPVRAVCAHL
LGLRLRGLYPVWPRGLQ*HVRESAVHQLCHVRDL
RLAQAGCLHREPRRAWQPSLDERSVFTLNCGVD
GRGAFYMFYFVS**QNE*TSLYLHKR

Sequence SIVA.aAug05

TGTGACGTCACGGCGTCGTTGGTAAGGGGCTGGCGGCCGGGGAGCTGCGTAGCTCCCGGCCCCGCGGCCATGCCCAAGCGGAGCTGCCCCTTCGCGGACG
TGGCCCCGCTACAGCTCAAGGTCCGCGTGAGCCAGAGGGAGTTGAGCCGCGGCGTGTGCGCCGAGCGCTACTCGCAGGAGGTCTTCGAGAAGACCAAGCG
ACTCCTGTTCCTCGGGGCCCAGGCCTACCTGGACCACGTGTGGGATGAAGGCTGTGCCGTCGTTCACCTGCCAGAGTCCCCAAAGCCTGGCCCTACAGGG
GCCCCGAGGGCTGCACGTGGGCAGATGCTGATTGGACCAGACGGCCGCCTGATCAGGAGCCTTGGGCAGGCCTCCGAAGCTGACCCATCTGGGGTAGCGT
CCATTGCCTGTTCCTCATGCGTGCGAGCCGTGGATGGGAAGGCGGTCTGCGGTCAGTGTGAGCGAGCCCTGTGCGGGCAGTGTGTGCGCACCTGCTGGGG
CTGCGGCTCCGTGGCCTGTACCCTGTGTGGCCTCGTGGACTGCAGTGACATGTACGAGAAAGTGCTGTGCACCAGCTGTGCCATGTTCGAGACCTGAGGC
TGGCTCAAGCCGGCTGCCTTCACCGGGAGCCACGCCGTGCATGGCAGCCTTCCCTGGACGAGCGCTCGGTGTTCACACTGAACTGTGGGGTCGACGGGAG
GGGTGCCTTTTACATGTTCTATTTTGTATCCTAATGACAGAATGAATAAACCTCTTTATATTTGCACAAGAGGAC
  • SIVA_HUMAN-3 (forward primer)
  • SIVA_HUMAN-4 (reverse primer)
  • Alternative acceptor

Frame 0

CDVTASLVRGWRPGSCVAPGPAAMPKRSCPFAD
VAPLQLKVRVSQRELSRGVCAERYSQEVFEKTKR
LLFLGAQAYLDHVWDEGCAVVHLPESPKPGPTG
APRAARGQMLIGPDGRLIRSLGQASEADPSGVA
SIACSSCVRAVDGKAVCGQCERALCGQCVRTCWG
CGSVACTLCGLVDCSDMYEKVLCTSCAMFET*G
WLKPAAFTGSHAVHGSLPWTSARCSH*TVGSTG
GVPFTCSILYPNDRMNKPLYICTRG

Frame 1

VTSRRRW*GAGGRGAA*LPAPRPCPSGAAPSRT
WPRYSSRSA*ARGS*AAACAPSATRRRSSRRPS
DSCSSGPRPTWTTCGMKAVPSFTCQSPQSLALQG
PRGLHVGRC*LDQTAA*SGALGRPPKLTHLG*R
PLPVPHACEPWMGRRSAVSVSEPCAGSVCAPAG
AAAPWPVPCVASWTAVTCTRKCCAPAVPCSRPEA
GSSRLPSPGATPCMAAFPGRALGVHTELWGRRE
GCLLHVLFCILMTE*INLFIFAQED

Frame 2

*RHGVVGKGLAAGELRSSRPRGHAQAELPLRGR
GPATAQGPREPEGVEPRRVRRALLAGGLREDQA
TPVPRGPGLPGPRVG*RLCRRSPARVPKAWPYR
GPEGCTWADADWTRRPPDQEPWAGLRS*PIWGSV
HCLFLMRASRGWEGGLRSV*ASPVRAVCAHLLG
LRLRGLYPVWPRGLQ*HVRESAVHQLCHVRDLR
LAQAGCLHREPRRAWQPSLDERSVFTLNCGVDGR
GAFYMFYFVS**QNE*TSLYLHKR

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