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Sequence SIVA.eAug05
TGTGACGTCACGGCGTCGTTGGTAAGGGGCTGGCGGCCGGGGAGCTGCGTAGCTCCCGGCCCCGCGGCCATGCCCAAGCGGAGCTGCCCCTTCGCGGACGTGGCCCCGCTACAGCTCAAGGTCCGCGTGAGCCAGAGGGAGTTGAGCCGCGGCGTGTGCGCCGAGCGCTACTCGCAGGAGGTCTTCGAGAAGACCAAGCG
ACTCCTGTTCCTCGGGGCCCAGGCCTACCTGGACCACGTGTGGGATGAAGGCTGTGCCGTCGTTCACCTGCCAGAGTCCCCAAAGCCTGGCCCTACAGGG
GCCCCGAGGGCTGCACGTGGGCAGATGCTGATTGGACCAGACGGCCGCCTGATCAGGAGCCTTGGGCAGGCCTCCGAAGCTGACCCATCTGGGGTAGCGT
CCATTGCCTGTTCCTCATGCGTGCGAGCCGTGGATGGGAAGGCGGTCTGCGGTCAGTGTGAGCGAGCCCTGTGCGGGCAGTGTGTGCGCACCTGCTGGGG
CTGCGGCTCCGTGGCCTGTACCCTGTGTGGCCTCGTGGATGACATGTACGAGAAAGTGCTGTGCACCAGCTGTGCCATGTTCGAGACCTGAGGCTGGCTC
AAGCCGGCTGCCTTCACCGGGAGCCACGCCGTGCATGGCAGCCTTCCCTGGACGAGCGCTCGGTGTTCACACTGAACTGTGGGGTCGACGGGAGGGGTGC
CTTTTACATGTTCTATTTTGTATCCTAATGACAGAATGAATAAACCTCTTTATATTTGCACAAGAGGAC
- SIVA_HUMAN-3 (forward primer)
- SIVA_HUMAN-4 (reverse primer)
- Alternative acceptor
Frame 0
CDVTASLVRGWRPGSCVAPGPAAMPKRSCPFADVAPLQLKVRVSQRELSRGVCAERYSQEVFEKTKR
LLFLGAQAYLDHVWDEGCAVVHLPESPKPGPTG
APRAARGQMLIGPDGRLIRSLGQASEADPSGVA
SIACSSCVRAVDGKAVCGQCERALCGQCVRTCWG
CGSVACTLCGLVDDMYEKVLCTSCAMFET*GWL
KPAAFTGSHAVHGSLPWTSARCSH*TVGSTGGV
PFTCSILYPNDRMNKPLYICTRG
Frame 1
VTSRRRW*GAGGRGAA*LPAPRPCPSGAAPSRTWPRYSSRSA*ARGS*AAACAPSATRRRSSRRPS
DSCSSGPRPTWTTCGMKAVPSFTCQSPQSLALQG
PRGLHVGRC*LDQTAA*SGALGRPPKLTHLG*R
PLPVPHACEPWMGRRSAVSVSEPCAGSVCAPAG
AAAPWPVPCVASWMTCTRKCCAPAVPCSRPEAGS
SRLPSPGATPCMAAFPGRALGVHTELWGRREGC
LLHVLFCILMTE*INLFIFAQED
Frame 2
*RHGVVGKGLAAGELRSSRPRGHAQAELPLRGRGPATAQGPREPEGVEPRRVRRALLAGGLREDQA
TPVPRGPGLPGPRVG*RLCRRSPARVPKAWPYR
GPEGCTWADADWTRRPPDQEPWAGLRS*PIWGSV
HCLFLMRASRGWEGGLRSV*ASPVRAVCAHLLG
LRLRGLYPVWPRG*HVRESAVHQLCHVRDLRLA
QAGCLHREPRRAWQPSLDERSVFTLNCGVDGRGA
FYMFYFVS**QNE*TSLYLHKR
Sequence SIVA.cAug05
TGTGACGTCACGGCGTCGTTGGTAAGGGGCTGGCGGCCGGGGAGCTGCGTAGCTCCCGGCCCCGCGGCCATGCCCAAGCGGAGCTGCCCCTTCGCGGACGTGGCCCCGCTACAGCTCAAGGTCCGCGTGAGCCAGAGGGAGTTGAGCCGCGGCGTGTGCGCCGAGCGCTACTCGCAGGAGGTCTTCGAGAAGACCAAGCG
ACTCCTGTTCCTCGGGGCCCAGGCCTACCTGGACCACGTGTGGGATGAAGGCTGTGCCGTCGTTCACCTGCCAGAGTCCCCAAAGCCTGGCCCTACAGGG
GCCCCGAGGGCTGCACGTGGGCAGATGCTGATTGGACCAGACGGCCGCCTGATCAGGAGCCTTGGGCAGGCCTCCGAAGCTGACCCATCTGGGGTAGCGT
CCATTGCCTGTTCCTCATGCGTGCGAGCCGTGGATGGGAAGGCGGTCTGCGGTCAGTGTGAGCGAGCCCTGTGCGGGCAGTGTGTGCGCACCTGCTGGGG
CTGCGGCTCCGTGGCCTGTACCCTGTGTGGCCTCGTGGAGGGCTACTCACCTGGTGGATGGGAGTGGACAGTGTGGAGCCTGTTTGCCCTGCCCCGTGAG
AAAGATGACTTCATCCAGACACATGTGGAACTGGCTCCATAGACCCAAAGCAAGCTTAGTCCAAACAATGTCTGAAATTGTCCATCTAAAATAGAAACCA
CATGTTACATCTCGAGTCCTTTCTCTCGAGCCTTTCTTCAGTCGGGGCAGAGGCCCAGACTCATTGGAGACGGAGAGCCCTGGGCAGGGGGGGCAGCACC
AGGGAGAAGCGCCGCGTGCCAGTGATCGGCTCCCATGGCTTCAGCATGGGCAGGAGTGGGGTAACGCACCCCATCCAGGTTGGGAATCATCTGCAGGGCT
AGCTATGAATGTGGGATACTCTGTCTTTGCTTTTCACCCGCTGAGTTCATCTTCTTTCCTAGAAGTAAACTGAAAAGGGCAGGGTTTTCTCATTGTCTGG
TGGCCCTCTCACCAAAGCAGAAGTGAACATAGCCATGGGCAGGTTCAGCGGAGAGGTGGGTCCCAGAGCGCTGCGTGGCTGGCCTCCCACTCCTGCCCTG
CACACCATCCTTGAGGGACTCCCTTGCGCCCATTTCCTCCTGGCCTCTACCTACTTTCTGCTGCTGCTTCCTCCCATACCCACAGAGTTCACGTTGAGCT
GAGTGGGCCACTGTCCCCACTGTGGACACACTCTTTTATCGCAGCTACAGCACAGGAGGTGGGCTCTGCCCTCTTTCACAAATAAATGACTTGTTCCAGG
TCACAAGCCAGAAGTGGCATTCCCAGGCCAGGCAGCCCAGCTGGTGGCACCCGCAGTCTCCTACCCCCTCCCCTGCCATTTCCTACTTCAGGACCAGGCG
TCGCAGGAGTGGGGGAAAACAGGGATCTGTCCACACGGCTCTGGTTTAACACAGATGCAGCCCAGCAGCCTTTGGCGTCCTGCTGATGGCCTGCACTGGC
CCACGCCTGGCCCGTCCTCTGCAGGGCTCTCCAGCTGGCTGCCGGTGGCGGTGAGGGGCTGTCTTCGCGGCTCACCCACAATACTACTGGCAAACTCTGC
AAACCAAGTGGCAAGCAGTTCTGGCTGCCTTGTTGACTCCACGGCCCTGTCGTGTTTGGGGTAGCCATTGCCAGTCCCGTTTCCTCGCAACATCTCTCTT
AATCACTTTCTCCCTGTGTTTTGCCGGGTTCCCTAGCCTTTACCTTTAGAGCTTTCTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCACCCAGG
CTGGAGTGCAGTGGTGCGATCTTGGCTCACTGCAACTTCCACCTCCTGTGTTCAAGCAATTTTCCTGTCTCAGCCTCCCAAGTAGCTGGAGTTACAGGCG
TGCGCTAGCACGCCCAGCTAATTTTTGTATTCTTAGTAGAGACAGAGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCTCC
GGCCTCAGCCTCCCAAAGTGCTGAGGTAAGCCACACCATACGCGTGAGCCACCATGCCCGGCCCTACCCTTAGTCTTGATATATCAGAAAAGCACTGTTT
GATGTGCTTCAGTGTAAACCATTGTGGTTCGGTGAATTCTGGCAGGTCATCTGGAGGTTTCTTTGGAGAGCTTCTATCCTACTGGAAACCCAGGTTGGGC
CCCATGTGGATTGATCGGCAGTGGGAATCAGCTAGGGCTGCTGTAACTGAGTTCGCAGACCCAGTGGCATAGACAGCAAAGAGGTACTGCCACGTGGCTT
TGGAGACCAGAAGTCTGAGAGGAAGGTGCTGGCAGGGCTGGTTCCTTCTGAGGCTGCAATGGAAAACCTGTCCTGGCCTCTCTCCTGGCATCTGCTGGTT
ATCTTTGGTGTTCCCTGTAGACAGCTGCCCCCTCCCTGTATCTTCATGTCGTCTTCCTTCTCTGTGTCCTTCTCTTCACGTAGTCTTTTTAGGACGCTGG
TCGTGTTGCCTTAGGGCCCCCATGTCAGTGCCGTCATCTAGACTGATGATGCCCGCAGTGATCCTGTCTCCAGATAAGGTCATGTCCTGAGGTGTTCTGG
GTTAGGACTTTGACGTTTGAATGGTGGGGGGTGGTGGACACAATTCAGCCCCTGACAGCAGCTTTTCTCTCCCCTCCCTGACGCTGTCGCAGCTGCAGTG
ACATGTACGAGAAAGTGCTGTGCACCAGCTGTGCCATGTTCGAGACCTGAGGCTGGCTCAAGCCGGCTGCCTTCACCGGGAGCCACGCCGTGCATGGCAG
CCTTCCCTGGACGAGCGCTCGGTGTTCACACTGAACTGTGGGGTCGACGGGAGGGGTGCCTTTTACATGTTCTATTTTGTATCCTAATGACAGAATGAAT
AAACCTCTTTATATTTGCACAA
- SIVA_HUMAN-3 (forward primer)
- SIVA_HUMAN-4 (reverse primer)
- Alternative acceptor
Frame 0
CDVTASLVRGWRPGSCVAPGPAAMPKRSCPFADVAPLQLKVRVSQRELSRGVCAERYSQEVFEKTKR
LLFLGAQAYLDHVWDEGCAVVHLPESPKPGPTG
APRAARGQMLIGPDGRLIRSLGQASEADPSGVA
SIACSSCVRAVDGKAVCGQCERALCGQCVRTCWG
CGSVACTLCGLVEGYSPGGWEWTVWSLFALPRE
KDDFIQTHVELAP*TQSKLSPNNV*NCPSKIET
TCYISSPFSRAFLQSGQRPRLIGDGEPWAGGAAP
GRSAACQ*SAPMASAWAGVG*RTPSRLGIICRA
SYECGILCLCFSPAEFIFFPRSKLKRAGFSHCL
VALSPKQK*T*PWAGSAERWVPERCVAGLPLLPC
TPSLRDSLAPISSWPLPTFCCCFLPYPQSSR*A
EWATVPTVDTLFYRSYSTGGGLCPLSQINDLFQ
VTSQKWHSQARQPSWWHPQSPTPSPAISYFRTRR
RRSGGKQGSVHTALV*HRCSPAAFGVLLMACTG
PRLARPLQGSPAGCRWR*GAVFAAHPQYYWQTL
QTKWQAVLAALLTPRPCRVWGSHCQSRFLATSLL
ITFSLCFAGFPSLYL*SFLFFFFLRRSLALSPR
LECSGAILAHCNFHLLCSSNFPVSASQVAGVTG
VR*HAQLIFVFLVETEFHHVGQAGLELLTSGDPP
ASASQSAEVSHTIRVSHHARPYP*S*YIRKALF
DVLQCKPLWFGEFWQVIWRFLWRASILLETQVG
PHVD*SAVGIS*GCCN*VRRPSGIDSKEVLPRGF
GDQKSERKVLAGLVPSEAAMENLSWPLSWHLLV
IFGVPCRQLPPPCIFMSSSFSVSFSSRSLFRTL
VVLP*GPHVSAVI*TDDARSDPVSR*GHVLRCSG
LGL*RLNGGGWWTQFSP*QQLFSPLPDAVAAAV
TCTRKCCAPAVPCSRPEAGSSRLPSPGATPCMA
AFPGRALGVHTELWGRREGCLLHVLFCILMTE*I
NLFIFAQ
Frame 1
VTSRRRW*GAGGRGAA*LPAPRPCPSGAAPSRTWPRYSSRSA*ARGS*AAACAPSATRRRSSRRPS
DSCSSGPRPTWTTCGMKAVPSFTCQSPQSLALQG
PRGLHVGRC*LDQTAA*SGALGRPPKLTHLG*R
PLPVPHACEPWMGRRSAVSVSEPCAGSVCAPAG
AAAPWPVPCVASWRATHLVDGSGQCGACLPCPVR
KMTSSRHMWNWLHRPKASLVQTMSEIVHLK*KP
HVTSRVLSLEPFFSRGRGPDSLETESPGQGGQH
QGEAPRASDRLPWLQHGQEWGNAPHPGWESSAGL
AMNVGYSVFAFHPLSSSSFLEVN*KGQGFLIVW
WPSHQSRSEHSHGQVQRRGGSQSAAWLASHSCP
AHHP*GTPLRPFPPGLYLLSAAASSHTHRVHVEL
SGPLSPLWTHSFIAATAQEVGSALFHK*MTCSR
SQARSGIPRPGSPAGGTRSLLPPPLPFPTSGPG
VAGVGENRDLSTRLWFNTDAAQQPLASC*WPALA
HAWPVLCRALQLAAGGGEGLSSRLTHNTTGKLC
KPSGKQFWLPC*LHGPVVFGVAIASPVSSQHLS
*SLSPCVLPGSLAFTFRAFFFFFF*DGVSLCHPG
WSAVVRSWLTATSTSCVQAIFLSQPPK*LELQA
CASTPS*FLYS**RQSFTMLARLVSNS*PQVIL
RPQPPKVLR*ATPYA*ATMPGPTLSLDISEKHCL
MCFSVNHCGSVNSGRSSGGFFGELLSYWKPRLG
PMWIDRQWESARAAVTEFADPVA*TAKRYCHVA
LETRSLRGRCWQGWFLLRLQWKTCPGLSPGICWL
SLVFPVDSCPLPVSSCRLPSLCPSLHVVFLGRW
SCCLRAPMSVPSSRLMMPAVILSPDKVMS*GVL
G*DFDV*MVGGGGHNSAPDSSFSLPSLTLSQLQ*
HVRESAVHQLCHVRDLRLAQAGCLHREPRRAWQ
PSLDERSVFTLNCGVDGRGAFYMFYFVS**QNE
*TSLYLH
Frame 2
*RHGVVGKGLAAGELRSSRPRGHAQAELPLRGRGPATAQGPREPEGVEPRRVRRALLAGGLREDQA
TPVPRGPGLPGPRVG*RLCRRSPARVPKAWPYR
GPEGCTWADADWTRRPPDQEPWAGLRS*PIWGSV
HCLFLMRASRGWEGGLRSV*ASPVRAVCAHLLG
LRLRGLYPVWPRGGLLTWWMGVDSVEPVCPAP*
ER*LHPDTCGTGSIDPKQA*SKQCLKLSI*NRNH
MLHLESFLSSLSSVGAEAQTHWRRRALGRGGST
REKRRVPVIGSHGFSMGRSGVTHPIQVGNHLQG
*L*MWDTLSLLFTR*VHLLS*K*TEKGRVFSLSG
GPLTKAEVNIAMGRFSGEVGPRALRGWPPTPAL
HTILEGLPCAHFLLASTYFLLLLPPIPTEFTLS
*VGHCPHCGHTLLSQLQHRRWALPSFTNK*LVPG
HKPEVAFPGQAAQLVAPAVSYPLPCHFLLQDQA
SQEWGKTGICPHGSGLTQMQPSSLWRPADGLHW
PTPGPSSAGLSSWLPVAVRGCLRGSPTILLANSA
NQVASSSGCLVDSTALSCLG*PLPVPFPRNISL
NHFLPVFCRVP*PLPLELSFFFFFETESRSVTQ
AGVQWCDLGSLQLPPPVFKQFSCLSLPSSWSYRR
ALARPANFCILSRDRVSPCWPGWSRTPDLR*SS
GLSLPKC*GKPHHTREPPCPALPLVLIYQKSTV
*CASV*TIVVR*ILAGHLEVSLESFYPTGNPGWA
PCGLIGSGNQLGLL*LSSQTQWHRQQRGTATWL
WRPEV*EEGAGRAGSF*GCNGKPVLASLLASAG
YLWCSL*TAAPSLYLHVVFLLCVLLFT*SF*DAG
RVALGPPCQCRHLD**CPQ*SCLQIRSCPEVFW
VRTLTFEWWGVVDTIQPLTAAFLSPP*RCRSCS
DMYEKVLCTSCAMFET*GWLKPAAFTGSHAVHGS
LPWTSARCSH*TVGSTGGVPFTCSILYPNDRMN
KPLYICT
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